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Enhanced links to genes are provided by Last update: November 21, 2010

Supplementary Table 2:

From:- Carter C.J. Schizophrenia susceptibility genes directly implicated in the life cycles of pathogens: Cytomegalovirus, Influenza, Herpes simplex, Rubella, and T.Gondii, Schiz Bull, in press, 2008

A summary of the human genes implicated in infection by various species of virus and pathogen. 

The data are a summary of association data stored at the HugeNet Phenopedia and of medline searches.

Genes also implicated in schizophrenia are highlighted in bold.

Wei Yu, Melinda Clyne, Anja Wulf, Ajay Yesupriya, Marta Gwinn, and Muin J. Khoury.  Phenopedia. HuGE Navigator.  Available at: Hugenavigator

Updates in progress

Influenza

HSV-1

HHV-6

Herpesviridae infections

Helicobacter pylori

Cytomegalovirus

Toxoplasmosis

No genetic studies found for Rubella

MBL2, IL10 1

HLA-DRB1 2

IL6 3,4

APOE 5

DEFB1 Tesse et al, 2009

HLA-B  6

IL10 7

MICB 7

IL18RAP 8

LTF 9

KIR2DL2/ KIR2DS2  10

TLR2  11

MBL 12

TP53 13

MHC2TA  14

APOE 15

CCR5 16

CTLA4 17

HLA-DRB1 18

IL4 19 19,20

IL10 21

TNF 22

23

IL1A, TGFB1 24

MHC2TA 14

HLA-A 25

IFNG 26

SLC11A1 27

IL8RB, IL13 28.

IL6, IL12A 19

FCGR3A 29

CD14 Virta et al, 2008

DEFB1 Tesse et al, 2009

HLA-B 30

HLA-DRB1 31 

IL1RN 32

IL10 33

IL12B 34

IL18, IL18R1, IL18RAP 8 

TNF 34

MBL, TLR4 35,36

TLR2 37

GJB2 38

MICA 39

HLA-DRB1 40

ABCA4 Jamieson et al, 2009

CCR5 Ashton et al, 2002

COL2A1 Jamieson et al, 2009

IFNG Memorias et al, 2009

IL10 Cordeiro et al, 2008

TLR9 Memorias et al, 2009

HLA-DQB*0402 and DRB1*08 in HIV infected patients Habegger et al, 2005

Schizophrenia-related genes: N and %

3 / 4 (75%)

5 / 10 (50%)

1 / 2 (50%)

7 / 18

(39%)

 

9 / 14

(64%)

1/1

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

A linkage study has identified a marker (D21S409) at 21q21.1 related to HSV-1 infection 41 . This chromosomal region has also been implicated in schizophrenia 42,43,44 .

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   21.    da Silva, G. N., Bacchi, M. M., Rainho, C. A., and de Oliveira, D. E. Epstein-Barr virus infection and single nucleotide polymorphisms in the promoter region of interleukin 10 gene in patients with Hodgkin lymphoma. Arch.Pathol.Lab Med 2007; 131: 1691-1696.

   22.    Wu, M. S., Huang, S. P., Chang, Y. T., Shun, C. T., Chang, M. C., Lin, M. T. et al. Tumor necrosis factor-alpha and interleukin-10 promoter polymorphisms in Epstein-Barr virus-associated gastric carcinoma. J Infect.Dis. 2002; 185: 106-109.

   23.    Haanpaa, M., Nurmikko, T., and Hurme, M. Polymorphism of the IL-10 gene is associated with susceptibility to herpes zoster. Scand.J Infect.Dis. 2002; 34: 112-114.

   24.    Hatta, K., Morimoto, A., Ishii, E., Kimura, H., Ueda, I., Hibi, S. et al. Association of transforming growth factor-beta1 gene polymorphism in the development of Epstein-Barr virus-related hematologic diseases. Haematologica 2007; 92: 1470-1474.

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   27.    Barshes, N. R., Lee, T. R., Goss, J. A., Goodpastor, S. E., Huls, M. H., Rooney, C. M. et al. Slc11a1 (formerly Nramp1) polymorphisms and susceptibility to post-transplant lymphoproliferative disease following pediatric liver transplantation. Transpl.Infect.Dis. 2006; 8 : 108-112.

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   29.    Brown, E. E., Fallin, M. D., Goedert, J. J., Chen, R., Whitby, D., Foster, C. B. et al. A common genetic variant in FCGR3A-V158F and risk of Kaposi sarcoma herpesvirus infection and classic Kaposi sarcoma. Cancer Epidemiol.Biomarkers Prev. 2005; 14: 633-637.

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   37.    Kijpittayarit, S., Eid, A. J., Brown, R. A., Paya, C. V., and Razonable, R. R. Relationship between Toll-like receptor 2 polymorphism and cytomegalovirus disease after liver transplantation. Clin.Infect.Dis. 2007; 44: 1315-1320.

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   44.    Takhar, J., Malla, A. K., Siu, V., MacPherson, C., Fan, Y. S., and Townsend, L. An interstitial deletion of the long arm of chromosome 21 in a case of a first episode of psychosis. Acta Psychiatr.Scand. 2002; 106: 71-74.

Last update: November 21, 2010