Your search is limited to records matching entrez query: immune AND txid9606 [ORGN].
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Format for	PSI-BLAST with inclusion threshold: [?] Format for PSI-BLAST: The Position-Specific Iterated BLAST (PSI-BLAST) program performs iterative searches with a protein query, in which sequences found in one round of search are used to build a custom score model for the next round. more... Inclusion Threshold: This sets the statistical significance threshold for including a sequence in the model used by PSI-BLAST to create the PSSM on the next iteration.
NC_001802:Human immunodeficiency virus 1,...

Query ID: gi|9629357|ref|NC_001802.1|; gi|9629357|ref|NC_001802.1|
Description: Human immunodeficiency virus 1, complete genome
Molecule type: rna
Query Length: 9181
Database Name: nr
Description: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects See details
Program: BLASTX 2.2.24+ Citation
Other reports: Search Summary
Search Parameters
Search parameter name	Search parameter value
Program	blastx
Word size	3
Expect value	100000
Hitlist size	20000
Gapcosts	9,1
Matrix	PAM30
Low Complexity Filter	Yes
Filter string	L;
Genetic Code	1
Window Size	40
Threshold	12
Database
Database parameter name	Database parameter value
Posted date	Aug 14, 2010 5:42 PM
Number of letters	3,987,752,839
Number of sequences	11,672,894
Entrez query	immune AND txid9606 [ORGN]
Karlin-Altschul statistics
Params	Ungapped	Gapped
Lambda	0.340025	0.294
K	0.282849	0.11
H	1.75357	0.61
Results Statistics
Results Statistics parameter name	Results Statistics parameter value
Length adjustment	26
Effective length of query	9155
Effective length of database	1097282
Effective search space	3329153588
Effective search space used	3329153588
Graphic Summary

Distribution of 5521 Blast Hits on the Query Sequence [?]

Descriptions

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GEO
Gene
Structure
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PubChem BioAssay
Sequences producing significant alignments:
Accession	Description	Max score	Total score	Query coverage	E value	Max ident
3JWO_A	Chain A, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility	820	1584	18%	0.0	100%
NP_000403.1	histidine-rich glycoprotein precursor [Homo sapiens]	30.8	435	5%	2.0	100%
1ZLS_L	Chain L, Fab 2g12 + Man4 >pdb\|1ZLU\|L Chain L, Fab 2g12 + Man5 >pdb\|1ZLU\|K Chain K, Fab 2g12 + Man5 >pdb\|1ZLV\|L Chain L, Fab 2g12 + Man7 >pdb\|1ZLV\|K Chain K, Fab 2g12 + Man7 >pdb\|1ZLW\|L Chain L, Fab 2g12 + Man8 >pdb\|1ZLW\|K Chain K, Fab 2g12 + Man8 >pdb\|2OQJ\|A Chain A, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1 >pdb\|2OQJ\|D Chain D, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1 >pdb\|2OQJ\|G Chain G, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1 >pdb\|2OQJ\|J Chain J, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1	30.3	289	3%	2.7	100%
1OM3_L	Chain L, Fab 2g12 Unliganded >pdb\|1OM3\|M Chain M, Fab 2g12 Unliganded >pdb\|1OP3\|L Chain L, Crystal Structure Of Fab 2g12 Bound To Man1->2man >pdb\|1OP3\|K Chain K, Crystal Structure Of Fab 2g12 Bound To Man1->2man >pdb\|1OP5\|L Chain L, Crystal Structure Of Fab 2g12 Bound To Man9glcnac2 >pdb\|1OP5\|K Chain K, Crystal Structure Of Fab 2g12 Bound To Man9glcnac2	30.3	289	3%	2.7	100%
NP_002151.2	tenascin precursor [Homo sapiens]	29.9	1451	18%	3.7	100%
NP_001167629.1	zinc finger protein ZFAT isoform 4 [Homo sapiens]	29.5	1002	12%	4.9	100%
NP_001167628.1	zinc finger protein ZFAT isoform 3 [Homo sapiens]	29.5	1087	14%	4.9	100%
NP_001161055.1	zinc finger protein ZFAT isoform 2 [Homo sapiens] >ref\|NP_001025110.2\| zinc finger protein ZFAT isoform 2 [Homo sapiens]	29.5	1104	14%	4.9	100%
NP_065914.2	zinc finger protein ZFAT isoform 1 [Homo sapiens] >sp\|Q9P243.2\|ZFAT_HUMAN RecName: Full=Zinc finger protein ZFAT; AltName: Full=Zinc finger gene in AITD susceptibility region; AltName: Full=Zinc finger protein 406	29.5	1104	14%	4.9	100%
NP_036595.2	V-type proton ATPase 116 kDa subunit a isoform 2 [Homo sapiens]	24.8	1018	14%	5.8	100%
3MLY_L	Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With A Ur29 V3 Peptide >pdb\|3MLY\|M Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With A Ur29 V3 Peptide >pdb\|3MLZ\|L Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With A Vi191 V3 Peptide	29.1	291	5%	6.6	83%
3MLX_L	Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With An Mn V3 Peptide >pdb\|3MLX\|M Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With An Mn V3 Peptide	29.1	291	5%	6.6	83%
2I07_B	Chain B, Human Complement Component C3b	29.1	974	12%	6.6	100%
2HR0_B	Chain B, Structure Of Complement C3b: Insights Into Complement Activation And Regulation >pdb\|2ICF\|B Chain B, Crig Bound To C3b >pdb\|3G6J\|B Chain B, C3b In Complex With A C3b Specific Fab >pdb\|3G6J\|D Chain D, C3b In Complex With A C3b Specific Fab >pdb\|2WII\|B Chain B, Complement C3b In Complex With Factor H Domains 1-4 >pdb\|2WIN\|B Chain B, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|D Chain D, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|F Chain F, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|H Chain H, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|3L5N\|B Chain B, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3b	29.1	974	12%	6.6	100%
NP_000055.2	complement C3 precursor [Homo sapiens] >sp\|P01024.2\|CO3_HUMAN RecName: Full=Complement C3; AltName: Full=C3 and PZP-like alpha-2-macroglobulin domain-containing protein 1; Contains: RecName: Full=Complement C3 beta chain; Contains: RecName: Full=Complement C3 alpha chain; Contains: RecName: Full=C3a anaphylatoxin; Contains: RecName: Full=Complement C3b alpha' chain; Contains: RecName: Full=Complement C3c alpha' chain fragment 1; Contains: RecName: Full=Complement C3dg fragment; Contains: RecName: Full=Complement C3g fragment; Contains: RecName: Full=Complement C3d fragment; Contains: RecName: Full=Complement C3f fragment; Contains: RecName: Full=Complement C3c alpha' chain fragment 2; Flags: Precursor >gb\|AAR89906.1\| complement component 3 [Homo sapiens] >gb\|EAW69071.1\| complement component 3, isoform CRA_b [Homo sapiens] >gb\|AAI50201.1\| Complement component 3 [Homo sapiens] >gb\|AAI50180.1\| Complement component 3 [Homo sapiens]	29.1	1661	20%	6.6	100%
2A73_B	Chain B, Human Complement Component C3	29.1	1007	12%	6.6	100%
2A74_C	Chain C, Human Complement Component C3c >pdb\|2A74\|F Chain F, Human Complement Component C3c >pdb\|2ICE\|C Chain C, Crig Bound To C3c >pdb\|2ICE\|F Chain F, Crig Bound To C3c >pdb\|2QKI\|C Chain C, Human C3c In Complex With The Inhibitor Compstatin >pdb\|2QKI\|F Chain F, Human C3c In Complex With The Inhibitor Compstatin >pdb\|3L3O\|F Chain F, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3L3O\|C Chain C, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3NMS\|C Chain C, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement C3c >pdb\|3NSA\|C Chain C, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3NSA\|F Chain F, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c	29.1	347	4%	6.6	100%
NP_006065.2	E3 ubiquitin-protein ligase TRIM22 [Homo sapiens]	29.1	473	6%	6.6	100%
AAA85332.1	complement component C3 [Homo sapiens]	29.1	1657	20%	6.6	100%
1F6A_A	Chain A, Structure Of The Human Ige-Fc Bound To Its High Affinity Receptor Fc(Epsilon)ri(Alpha)	29.1	261	3%	6.6	100%
NP_001140177.1	lysine-specific demethylase 5D isoform 1 [Homo sapiens]	28.6	1340	17%	8.9	100%
NP_006717.2	lipopolysaccharide-responsive and beige-like anchor protein [Homo sapiens] >sp\|P50851.4\|LRBA_HUMAN RecName: Full=Lipopolysaccharide-responsive and beige-like anchor protein; AltName: Full=CDC4-like protein; AltName: Full=Beige-like protein	28.6	2939	34%	8.9	100%
NP_001140178.1	lysine-specific demethylase 5D isoform 3 [Homo sapiens]	28.6	1340	17%	8.9	100%
NP_056127.2	fragile site-associated protein [Homo sapiens]	28.6	4966	56%	8.9	100%
Q92835.2	RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 1; AltName: Full=SH2 domain-containing inositol-5'-phosphatase 1; Short=SH2 domain-containing inositol phosphatase 1; Short=SHIP-1; AltName: Full=Inositol polyphosphate-5-phosphatase of 145 kDa; Short=SIP-145; AltName: Full=p150Ship; Short=hp51CN	28.6	1321	17%	8.9	100%
NP_004644.2	lysine-specific demethylase 5D isoform 2 [Homo sapiens]	28.6	1340	17%	8.9	100%
1YJD_C	Chain C, Crystal Structure Of Human Cd28 In Complex With The Fab Fragment Of A Mitogenic Antibody (5.11a1)	28.6	160	2%	8.9	90%
NP_877436.1	family with sequence similarity 19 (chemokine (C-C motif)-like), member A3 isoform 1 [Homo sapiens]	28.6	160	2%	8.9	100%
NP_006130.1	T-cell-specific surface glycoprotein CD28 precursor [Homo sapiens]	28.6	336	4%	8.9	90%
NP_001004440.1	family with sequence similarity 19 (chemokine (C-C motif)-like), member A3 isoform 2 [Homo sapiens]	28.6	207	3%	8.9	83%
NP_671714.1	A-kinase anchor protein 9 isoform 3 [Homo sapiens]	28.6	5065	46%	8.9	100%
NP_005742.4	A-kinase anchor protein 9 isoform 2 [Homo sapiens]	28.6	5102	47%	8.9	100%
2QR0_A	Chain A, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|E Chain E, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|G Chain G, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|K Chain K, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|M Chain M, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|Q Chain Q, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|S Chain S, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|W Chain W, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs	28.2	337	5%	12	100%
NP_443176.2	sodium/myo-inositol cotransporter 2 [Homo sapiens]	28.2	854	13%	12	100%
Q6P179.2	RecName: Full=Endoplasmic reticulum aminopeptidase 2; AltName: Full=Leukocyte-derived arginine aminopeptidase; Short=L-RAP	28.2	1118	15%	12	100%
NP_056189.1	SUN domain-containing protein 2 [Homo sapiens]	28.2	750	10%	12	100%
NP_056289.2	SAM domain and HD domain-containing protein 1 [Homo sapiens] >sp\|Q9Y3Z3.2\|SAMH1_HUMAN RecName: Full=SAM domain and HD domain-containing protein 1; AltName: Full=Dendritic cell-derived IFNG-induced protein; Short=DCIP; AltName: Full=Monocyte protein 5; Short=MOP-5	28.2	642	9%	12	100%
3GHB_H	Chain H, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide W2rw020 >pdb\|3GHB\|I Chain I, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide W2rw020	27.8	268	4%	16	100%
NP_115960.2	EGF-like module-containing mucin-like hormone receptor-like 3 [Homo sapiens] >sp\|Q9BY15.2\|EMR3_HUMAN RecName: Full=EGF-like module-containing mucin-like hormone receptor-like 3; AltName: Full=EGF-like module receptor 3; Contains: RecName: Full=EGF-like module-containing mucin-like hormone receptor-like 3 subunit alpha; Contains: RecName: Full=EGF-like module-containing mucin-like hormone receptor-like 3 subunit beta; Flags: Precursor	27.8	594	9%	16	100%
AAY16610.1	immunoglobulin kappa light chain [Homo sapiens]	27.8	181	2%	16	100%
1Q1J_H	Chain H, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide >pdb\|1Q1J\|I Chain I, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide >pdb\|3C2A\|H Chain H, Antibody Fab Fragment 447-52d In Complex With Ug1033 Peptide >pdb\|3C2A\|I Chain I, Antibody Fab Fragment 447-52d In Complex With Ug1033 Peptide	27.8	268	4%	16	100%
P09871.1	RecName: Full=Complement C1s subcomponent; AltName: Full=Complement component 1 subcomponent s; AltName: Full=C1 esterase; Contains: RecName: Full=Complement C1s subcomponent heavy chain; Contains: RecName: Full=Complement C1s subcomponent light chain; Flags: Precursor	27.8	638	8%	16	100%
O14802.2	RecName: Full=DNA-directed RNA polymerase III subunit RPC1; Short=RNA polymerase III subunit C1; AltName: Full=DNA-directed RNA polymerase III subunit A; AltName: Full=DNA-directed RNA polymerase III largest subunit; AltName: Full=RNA polymerase III 155 kDa subunit; Short=RPC155; AltName: Full=RNA polymerase III subunit C160	27.8	1412	17%	16	100%
NP_055615.8	engulfment and cell motility protein 1 isoform 1 [Homo sapiens]	27.8	588	9%	16	100%
CAR62613.1	immunoglobulin heavy chain variable region [Homo sapiens]	27.4	145	2%	21	85%
O15357.2	RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 2; AltName: Full=SH2 domain-containing inositol-5'-phosphatase 2; Short=SH2 domain-containing inositol phosphatase 2; Short=SHIP-2; AltName: Full=Inositol polyphosphate phosphatase-like protein 1; Short=INPPL-1; AltName: Full=Protein 51C	27.4	1280	16%	21	100%
NP_690611.1	tumor necrosis factor receptor superfamily member 6 isoform 3 precursor [Homo sapiens]	27.4	299	4%	21	83%
NP_690610.1	tumor necrosis factor receptor superfamily member 6 isoform 2 precursor [Homo sapiens]	27.4	293	4%	21	83%
NP_009195.1	G-protein coupled receptor 182 [Homo sapiens] >sp\|O15218.1\|GP182_HUMAN RecName: Full=G-protein coupled receptor 182 >emb\|CAA73910.1\| G-protein coupled receptor [Homo sapiens]	27.4	791	12%	21	100%
NP_000034.1	tumor necrosis factor receptor superfamily member 6 isoform 1 precursor [Homo sapiens]	27.4	384	5%	21	83%
NP_148936.2	fas-activated serine/threonine kinase isoform 4 [Homo sapiens]	27.4	531	7%	21	100%
NP_006703.1	fas-activated serine/threonine kinase isoform 1 [Homo sapiens]	27.4	673	9%	21	100%
ABR91958.1	T-cell receptor beta chain [Homo sapiens]	26.9	76.4	1%	29	71%
ABR37257.1	T-cell receptor beta chain [Homo sapiens]	26.9	93.1	1%	29	71%
ABR37249.1	T cell receptor [Homo sapiens]	26.9	63.8	0%	29	83%
ABR37248.1	T cell receptor [Homo sapiens]	26.9	174	2%	29	100%
2IAL_B	Chain B, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAL\|D Chain D, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAM\|D Chain D, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|E Chain E, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|J Chain J, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|O Chain O, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|T Chain T, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr	26.9	195	2%	29	100%
2GSX_A	Chain A, Complement Receptor Type 2	26.9	869	12%	29	100%
NP_733840.1	NLR family member X1 isoform 2 [Homo sapiens]	26.9	1056	14%	29	100%
NP_149052.1	microtubule-associated protein 6 isoform 1 [Homo sapiens]	26.9	623	10%	29	100%
NP_997460.1	microtubule-associated protein 6 isoform 2 [Homo sapiens]	26.9	503	7%	29	100%
NP_001868.2	complement receptor type 2 isoform 2 precursor [Homo sapiens]	26.9	934	14%	29	100%
NP_005017.3	phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta isoform [Homo sapiens]	26.9	1016	14%	29	100%
NP_001006659.1	complement receptor type 2 isoform 1 precursor [Homo sapiens]	26.9	1016	15%	29	100%
NP_078894.2	NLR family member X1 isoform 1 [Homo sapiens]	26.9	1202	16%	29	100%
Q9NRA2.2	RecName: Full=Sialin; AltName: Full=Solute carrier family 17 member 5; AltName: Full=Sodium/sialic acid cotransporter; Short=AST; AltName: Full=Membrane glycoprotein HP59	26.5	542	8%	38	100%
NP_055992.1	protein deltex-4 [Homo sapiens] >sp\|Q9Y2E6.2\|DTX4_HUMAN RecName: Full=Protein deltex-4; Short=Deltex4; AltName: Full=RING finger protein 155	26.5	607	7%	39	100%
2C0Y_A	Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human Procathepsin S	26.5	158	2%	39	100%
NP_078966.2	mucin-16 [Homo sapiens]	26.5	1.677e+04	71%	39	100%
P29597.3	RecName: Full=Non-receptor tyrosine-protein kinase TYK2	26.5	1370	18%	39	100%
AAY16632.1	immunoglobulin kappa light chain [Homo sapiens]	26.5	77.6	1%	39	100%
P14866.2	RecName: Full=Heterogeneous nuclear ribonucleoprotein L; Short=hnRNP L	26.5	421	6%	39	100%
1W0R_A	Chain A, Solution Structure Of Dimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation >pdb\|1W0R\|B Chain B, Solution Structure Of Dimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation >pdb\|1W0S\|A Chain A, Solution Structure Of Trimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation >pdb\|1W0S\|B Chain B, Solution Structure Of Trimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation >pdb\|1W0S\|C Chain C, Solution Structure Of Trimeric Form Of Properdin By X-Ray Solution Scattering And Analytical Ultracentrifugation	26.5	390	4%	39	100%
P60608.1	RecName: Full=HERV-F(c)2_7q36.2 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=Fc2deltaenv; Includes: RecName: Full=Surface protein; Short=SU; Includes: RecName: Full=Truncated transmembrane protein; Short=TM	26.5	816	12%	39	100%
CAD88716.1	immunoglobulin lambda light chain variable region [Homo sapiens]	26.5	140	2%	39	83%
NP_002612.1	properdin precursor [Homo sapiens] >ref\|NP_001138724.1\| properdin precursor [Homo sapiens]	26.5	440	5%	39	100%
O43316.1	RecName: Full=Paired box protein Pax-4	26.5	234	3%	39	83%
CAB51302.1	immunoglobulin kappa chain variable region [Homo sapiens]	26.5	81.0	1%	39	100%
1GLO_A	Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin S	26.5	81.5	1%	39	100%
NP_005689.2	secretory carrier-associated membrane protein 3 isoform 1 [Homo sapiens]	26.5	596	8%	39	100%
Q07000.1	RecName: Full=HLA class I histocompatibility antigen, Cw-15 alpha chain; AltName: Full=MHC class I antigen Cw*15; Flags: Precursor	26.5	251	3%	39	100%
NP_003599.2	psychosine receptor [Homo sapiens]	26.5	564	9%	39	83%
CAB75584.1	human leucocyte antigen C [Homo sapiens]	26.5	149	2%	39	100%
Q9NR97.1	RecName: Full=Toll-like receptor 8; AltName: CD_antigen=CD288; Flags: Precursor	26.5	1246	17%	39	100%
NP_443069.1	secretory carrier-associated membrane protein 3 isoform 2 [Homo sapiens]	26.5	561	8%	39	100%
NP_001124382.1	C-C chemokine receptor-like 2 isoform 2 [Homo sapiens]	26.1	308	4%	52	83%
3BZF_A	Chain A, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZF\|C Chain C, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E	26.1	196	2%	52	100%
3CDG_A	Chain A, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3CDG\|C Chain C, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3BZE\|A Chain A, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZE\|C Chain C, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZE\|E Chain E, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZE\|G Chain G, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3CII\|A Chain A, Structure Of Nkg2aCD94 BOUND TO HLA-E >pdb\|3CII\|D Chain D, Structure Of Nkg2aCD94 BOUND TO HLA-E	26.1	196	2%	52	100%
NP_055874.2	talin-2 [Homo sapiens]	26.1	2774	33%	52	100%
2JOG_A	Chain A, Structure Of The Calcineurin-Nfat Complex	26.1	266	4%	52	100%
NP_955452.3	DNA polymerase theta [Homo sapiens]	26.1	2455	30%	52	100%
NP_001004310.2	Fc receptor-like protein 6 precursor [Homo sapiens]	26.1	474	6%	52	100%
NP_001027581.1	2'-5'-oligoadenylate synthase 1 isoform 3 [Homo sapiens]	26.1	314	4%	52	100%
NP_058132.2	2'-5'-oligoadenylate synthase 1 isoform 1 [Homo sapiens]	26.1	264	4%	52	100%
Q9Y4I1.2	RecName: Full=Myosin-Va; AltName: Full=Dilute myosin heavy chain, non-muscle; AltName: Full=Myosin-12; AltName: Full=Myosin heavy chain 12; AltName: Full=Myoxin	26.1	1933	24%	52	100%
2ESV_A	Chain A, Structure Of The Hla-E-VmaprtlilKK50.4 TCR COMPLEX	26.1	196	2%	52	100%
NP_002525.2	2'-5'-oligoadenylate synthase 1 isoform 2 [Homo sapiens]	26.1	264	4%	52	100%
P13671.3	RecName: Full=Complement component C6; Flags: Precursor	26.1	785	10%	52	100%
NP_079520.1	testis-specific gene 10 protein [Homo sapiens] >ref\|NP_878915.2\| testis-specific gene 10 protein [Homo sapiens]	26.1	521	10%	52	100%
NP_003956.2	C-C chemokine receptor-like 2 isoform 1 [Homo sapiens]	26.1	308	4%	52	83%
1KPR_A	Chain A, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1KPR\|C Chain C, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1KTL\|A Chain A, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1KTL\|C Chain C, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E	26.1	180	2%	52	100%
1G1Q_A	Chain A, Crystal Structure Of P-Selectin LectinEGF DOMAINS >pdb\|1G1Q\|B Chain B, Crystal Structure Of P-Selectin LectinEGF DOMAINS >pdb\|1G1Q\|C Chain C, Crystal Structure Of P-Selectin LectinEGF DOMAINS >pdb\|1G1Q\|D Chain D, Crystal Structure Of P-Selectin LectinEGF DOMAINS >pdb\|1G1R\|A Chain A, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed With Slex >pdb\|1G1R\|B Chain B, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed With Slex >pdb\|1G1R\|C Chain C, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed With Slex >pdb\|1G1R\|D Chain D, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed With Slex >pdb\|1G1S\|A Chain A, P-Selectin LectinEGF DOMAINS COMPLEXED WITH PSGL-1 Peptide >pdb\|1G1S\|B Chain B, P-Selectin LectinEGF DOMAINS COMPLEXED WITH PSGL-1 Peptide	26.1	139	1%	52	83%
P28907.2	RecName: Full=ADP-ribosyl cyclase 1; AltName: Full=Cyclic ADP-ribose hydrolase 1; Short=cADPr hydrolase 1; AltName: Full=T10; AltName: CD_antigen=CD38	26.1	367	5%	52	100%
NP_631904.1	NKG2D ligand 4 precursor [Homo sapiens] >sp\|Q8TD07.1\|N2DL4_HUMAN RecName: Full=NKG2D ligand 4; Short=NKG2DL4; Short=N2DL-4; AltName: Full=Retinoic acid early transcript 1E; AltName: Full=Lymphocyte effector toxicity activation ligand; AltName: Full=RAE-1-like transcript 4; Short=RL-4; Flags: Precursor >gb\|AAL58090.1\| lymphocyte effector toxicity activation ligand [Homo sapiens]	26.1	362	6%	52	100%
NP_005507.3	HLA class I histocompatibility antigen, alpha chain E precursor [Homo sapiens]	26.1	339	5%	52	100%
AAY33483.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	25.7	137	1%	61	100%
P25963.1	RecName: Full=NF-kappa-B inhibitor alpha; AltName: Full=I-kappa-B-alpha; Short=IkappaBalpha; Short=IkB-alpha; AltName: Full=Major histocompatibility complex enhancer-binding protein MAD3	22.7	410	4%	68	100%
3MLV_L	Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With An Nof V3 Peptide >pdb\|3MLV\|M Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With An Nof V3 Peptide	25.7	252	5%	70	83%
3MLU_L	Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Zam18 V3 Peptide	25.7	252	5%	70	83%
3MLR_L	Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ny5 V3 Peptide >pdb\|3MLS\|L Chain L, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLS\|M Chain M, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLS\|N Chain N, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLS\|O Chain O, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLT\|L Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLT\|A Chain A, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLT\|D Chain D, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLT\|G Chain G, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide	25.7	234	4%	70	83%
3MUH_L	Chain L, Crystal Structure Of Pg9 Light Chain	25.7	197	4%	70	85%
3MUG_A	Chain A, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|C Chain C, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|E Chain E, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|G Chain G, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|I Chain I, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|K Chain K, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody	25.7	199	2%	70	83%
3MME_L	Chain L, Structure And Functional Dissection Of Pg16, An Antibody Wit And Potent Neutralization Of Hiv-1 >pdb\|3MME\|B Chain B, Structure And Functional Dissection Of Pg16, An Antibody Wit And Potent Neutralization Of Hiv-1 >pdb\|3MME\|D Chain D, Structure And Functional Dissection Of Pg16, An Antibody Wit And Potent Neutralization Of Hiv-1	25.7	199	2%	70	83%
3LRS_L	Chain L, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3LRS\|B Chain B, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3LRS\|D Chain D, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3LRS\|F Chain F, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1	25.7	199	2%	70	83%
3LMJ_L	Chain L, Structure Of Human Anti Hiv 21c Fab >pdb\|3LQA\|L Chain L, Crystal Structure Of Clade C Gp120 In Complex With Scd4 And	25.7	204	4%	70	100%
3GHE_L	Chain L, Crystal Structure Of Anti-Hiv-1 Fab 537-10d In Complex With V3 Peptide Mn	25.7	236	4%	70	85%
ACN63289.1	B cell antibody heavy chain variable region [Homo sapiens]	25.7	139	1%	70	100%
ACN63272.1	B cell antibody heavy chain variable region [Homo sapiens]	25.7	106	1%	70	100%
3G04_A	Chain A, Crystal Structure Of The Tsh Receptor In Complex With A Thyroid-Stimulating Autoantibody	25.7	255	5%	70	83%
3H0T_A	Chain A, Hepcidin-Fab Complex	25.7	249	4%	70	83%
3G6D_L	Chain L, Crystal Structure Of The Complex Between Cnto607 Fab And Il- 13 >pdb\|3G6A\|L Chain L, Crystal Structure Of Anti-Il-13 Antibody Cnto607 >pdb\|3G6A\|A Chain A, Crystal Structure Of Anti-Il-13 Antibody Cnto607	25.7	287	5%	70	83%
3GBM_L	Chain L, Crystal Structure Of Fab Cr6261 In Complex With A H5n1 Influenza Virus Hemagglutinin >pdb\|3GBM\|M Chain M, Crystal Structure Of Fab Cr6261 In Complex With A H5n1 Influenza Virus Hemagglutinin.	25.7	167	3%	70	83%
CAR62751.1	immunoglobulin heavy chain variable region [Homo sapiens]	25.7	148	1%	70	83%
3C2A_L	Chain L, Antibody Fab Fragment 447-52d In Complex With Ug1033 Peptide >pdb\|3C2A\|M Chain M, Antibody Fab Fragment 447-52d In Complex With Ug1033 Peptide >pdb\|3GHB\|L Chain L, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide W2rw020 >pdb\|3GHB\|M Chain M, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide W2rw020	25.7	238	4%	70	83%
ACA28842.1	T cell receptor variable beta 2 chain [Homo sapiens]	25.7	281	3%	70	100%
NP_055022.2	T-cell surface glycoprotein CD5 precursor [Homo sapiens]	25.7	579	7%	70	100%
2JB5_L	Chain L, Fab Fragment In Complex With Small Molecule Hapten, Crystal Form-1 >pdb\|2JB6\|A Chain A, Fab Fragment In Complex With Small Molecule Hapten, Crystal Form-2 >pdb\|2JB6\|L Chain L, Fab Fragment In Complex With Small Molecule Hapten, Crystal Form-2	25.7	236	4%	70	85%
NP_619727.2	nuclear factor of activated T-cells 5 isoform b [Homo sapiens]	25.7	1502	19%	70	100%
2PGV_A	Chain A, Gtb C209a >pdb\|2PGY\|A Chain A, Gtb C209a, No Hg	25.7	456	6%	70	100%
2OLD_A	Chain A, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P3(2)21 Crystal Form >pdb\|2OLD\|B Chain B, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P3(2)21 Crystal Form >pdb\|2OMB\|A Chain A, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P3(1)21 Crystal Form >pdb\|2OMB\|B Chain B, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P3(1)21 Crystal Form >pdb\|2OMB\|C Chain C, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P3(1)21 Crystal Form >pdb\|2OMB\|D Chain D, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P3(1)21 Crystal Form >pdb\|2OMN\|A Chain A, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P4(3)2(1)2 Crystal Form >pdb\|2OMN\|B Chain B, Bence Jones Kwr Protein- Immunoglobulin Light Chain Dimer, P4(3)2(1)2 Crystal Form	25.7	198	3%	70	83%
NP_001124183.1	C-type lectin domain family 2 member A [Homo sapiens]	25.7	193	2%	70	100%
NP_000601.3	CD44 antigen isoform 1 precursor [Homo sapiens]	25.7	674	8%	70	100%
NP_001001389.1	CD44 antigen isoform 2 precursor [Homo sapiens]	25.7	590	7%	70	100%
Q9P126.2	RecName: Full=C-type lectin domain family 1 member B; AltName: Full=C-type lectin-like receptor 2; Short=CLEC-2	25.7	260	4%	70	83%
NP_001106649.1	nuclear factor of activated T-cells 5 isoform d [Homo sapiens]	25.7	1502	19%	70	100%
NP_115984.3	neurabin-2 [Homo sapiens]	25.7	779	12%	70	100%
NP_065805.2	rho GTPase-activating protein 31 [Homo sapiens]	25.7	1479	19%	70	100%
NP_001001390.1	CD44 antigen isoform 3 precursor [Homo sapiens]	25.7	377	4%	70	100%
2FL5_L	Chain L, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody >pdb\|2FL5\|A Chain A, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody >pdb\|2FL5\|C Chain C, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody >pdb\|2FL5\|E Chain E, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody	25.7	200	3%	70	83%
AAO91767.1	IRF4-binding protein [Homo sapiens]	25.7	971	13%	70	85%
NP_071330.3	differentially expressed in FDCP 6 homolog [Homo sapiens] >sp\|Q9H4E7.1\|DEFI6_HUMAN RecName: Full=Differentially expressed in FDCP 6 homolog; Short=DEF-6; AltName: Full=IRF4-binding protein	25.7	971	13%	70	85%
Q9BYX4.3	RecName: Full=Interferon-induced helicase C domain-containing protein 1; AltName: Full=Interferon-induced with helicase C domain protein 1; AltName: Full=Helicase with 2 CARD domains; Short=Helicard; AltName: Full=Melanoma differentiation-associated protein 5; Short=MDA-5; AltName: Full=RNA helicase-DEAD box protein 116; AltName: Full=Murabutide down-regulated protein	25.7	1186	17%	70	100%
NP_775087.1	interleukin-28 receptor subunit alpha isoform 2 [Homo sapiens]	25.7	570	8%	70	100%
NP_001001392.1	CD44 antigen isoform 5 precursor [Homo sapiens]	25.7	92.3	0%	70	100%
NP_001001391.1	CD44 antigen isoform 4 precursor [Homo sapiens]	25.7	306	3%	70	100%
NP_765975.1	nuclear factor of activated T-cells, cytoplasmic 1 isoform C [Homo sapiens]	25.7	788	11%	70	100%
NP_619728.2	nuclear factor of activated T-cells 5 isoform a [Homo sapiens] >ref\|NP_775321.1\| nuclear factor of activated T-cells 5 isoform a [Homo sapiens]	25.7	1402	18%	70	100%
1ZVO_A	Chain A, Semi-Extended Solution Structure Of Human Myeloma Immunoglobulin D Determined By Constrained X-Ray Scattering >pdb\|1ZVO\|B Chain B, Semi-Extended Solution Structure Of Human Myeloma Immunoglobulin D Determined By Constrained X-Ray Scattering	25.7	267	5%	70	100%
CAE45757.1	immune associated nucleotide 6c [Homo sapiens]	25.7	307	4%	70	83%
1Q1J_L	Chain L, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide >pdb\|1Q1J\|M Chain M, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d In Complex With V3 Peptide	25.7	238	4%	70	83%
1NL0_L	Chain L, Crystal Structure Of Human Factor Ix Gla Domain In Complex Of An Inhibitory Antibody, 10c12	25.7	198	4%	70	83%
1RZF_L	Chain L, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody E51	25.7	221	3%	70	83%
2FH4_A	Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8 >pdb\|2FH4\|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8 >pdb\|2FH4\|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8	25.7	355	4%	70	100%
Q9UKJ0.1	RecName: Full=Paired immunoglobulin-like type 2 receptor beta; AltName: Full=Activating receptor PILR-beta; AltName: Full=Cell surface receptor FDFACT; Flags: Precursor	25.7	311	5%	70	90%
P20138.2	RecName: Full=Myeloid cell surface antigen CD33; AltName: Full=Sialic acid-binding Ig-like lectin 3; Short=Siglec-3; AltName: Full=gp67; AltName: CD_antigen=CD33; Flags: Precursor	25.7	414	6%	70	100%
NP_006590.1	nuclear factor of activated T-cells 5 isoform c [Homo sapiens]	25.7	1486	20%	70	100%
1F2Q_A	Chain A, Crystal Structure Of The Human High-Affinity Ige Receptor >pdb\|1J86\|A Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Monoclinic Crystal Form 2 >pdb\|1J86\|B Chain B, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Monoclinic Crystal Form 2	25.7	244	3%	70	100%
NP_443122.3	N-acetylmuramoyl-L-alanine amidase precursor [Homo sapiens]	25.7	639	10%	70	100%
1J87_A	Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Hexagonal Crystal Form 1	25.7	244	3%	70	100%
NP_005891.1	mothers against decapentaplegic homolog 1 [Homo sapiens] >ref\|NP_001003688.1\| mothers against decapentaplegic homolog 1 [Homo sapiens]	25.7	468	7%	70	100%
NP_033665.1	galectin-9 isoform long [Homo sapiens]	25.7	396	5%	70	100%
NP_003692.1	tumor necrosis factor ligand superfamily member 11 isoform 1 [Homo sapiens] >sp\|O14788.1\|TNF11_HUMAN RecName: Full=Tumor necrosis factor ligand superfamily member 11; AltName: Full=Receptor activator of nuclear factor kappa-B ligand; Short=RANKL; AltName: Full=TNF-related activation-induced cytokine; Short=TRANCE; AltName: Full=Osteoprotegerin ligand; Short=OPGL; AltName: Full=Osteoclast differentiation factor; Short=ODF; AltName: CD_antigen=CD254; Contains: RecName: Full=Tumor necrosis factor ligand superfamily member 11, membrane form; Contains: RecName: Full=Tumor necrosis factor ligand superfamily member 11, soluble form	25.7	366	5%	70	85%
AAP44471.1	heat shock protein apg-1 [Homo sapiens]	25.7	723	10%	70	100%
CAC85285.1	anti-peptide/MHC complex HLA-A1/MAGE-A1 monoclonal antibody light chain [Homo sapiens]	25.7	201	4%	70	83%
P51681.1	RecName: Full=C-C chemokine receptor type 5; Short=C-C CKR-5; Short=CC-CKR-5; Short=CCR-5; Short=CCR5; AltName: Full=HIV-1 fusion coreceptor; AltName: Full=CHEMR13; AltName: CD_antigen=CD195 >gb\|ABB01004.1\| C-C chemokine receptor type 5 [Homo sapiens]	25.7	534	6%	70	100%
NP_143026.1	tumor necrosis factor ligand superfamily member 11 isoform 2 [Homo sapiens]	25.7	279	4%	70	80%
NP_001120645.1	cell adhesion molecule 3 isoform 2 [Homo sapiens]	25.7	445	6%	70	100%
NP_002299.2	galectin-9 isoform short [Homo sapiens]	25.7	363	4%	70	100%
O75326.1	RecName: Full=Semaphorin-7A; AltName: Full=Semaphorin-L; Short=Sema L; AltName: Full=Semaphorin-K1; Short=Sema K1; AltName: Full=John-Milton-Hargen human blood group Ag; AltName: Full=JMH blood group antigen; AltName: Full=CDw108; AltName: CD_antigen=CD108; Flags: Precursor	25.7	485	8%	70	100%
1J89_A	Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 2 >pdb\|1J89\|B Chain B, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 2 >pdb\|1J89\|C Chain C, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 2 >pdb\|1J89\|D Chain D, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 2 >pdb\|1J89\|E Chain E, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 2 >pdb\|1J88\|A Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 1 >pdb\|1J88\|B Chain B, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 1 >pdb\|1J88\|C Chain C, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 1 >pdb\|1J88\|D Chain D, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 1 >pdb\|1J88\|E Chain E, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), Tetragonal Crystal Form 1	25.7	244	3%	70	100%
NP_734464.1	interleukin-28 receptor subunit alpha isoform 1 [Homo sapiens]	25.7	574	9%	70	100%
NP_067012.1	cell adhesion molecule 3 isoform 1 [Homo sapiens]	25.7	510	7%	70	100%
NP_057529.1	pleckstrin-2 [Homo sapiens]	25.7	360	5%	70	100%
NP_783161.1	GTPase IMAP family member 8 [Homo sapiens] >sp\|Q8ND71.2\|GIMA8_HUMAN RecName: Full=GTPase IMAP family member 8; AltName: Full=Immune-associated nucleotide-binding protein 9; Short=IAN-9; AltName: Full=Protein IanT >gb\|EAL24479.1\| human immune associated nucleotide 6 [Homo sapiens] >emb\|CAD39025.2\| hypothetical protein [Homo sapiens]	25.7	618	9%	70	100%
2VXQ_L	Chain L, Crystal Structure Of The Major Grass Pollen Allergen Phl P 2 In Complex With Its Specific Ige-Fab	22.3	212	3%	72	100%
AAN40505.1	melanoma-associated antigen [Homo sapiens]	22.3	403	5%	731	83%
2X44_D	Chain D, Structure Of A Strand-Swapped Dimeric Form Of Ctla-4	25.2	128	2%	93	83%
3LGD_A	Chain A, Crystal Structure Of Human Adenosine Deaminase Growth Factor Adenosine Deaminase Type 2 (Ada2) >pdb\|3LGD\|B Chain B, Crystal Structure Of Human Adenosine Deaminase Growth Factor Adenosine Deaminase Type 2 (Ada2) >pdb\|3LGG\|A Chain A, Crystal Structure Of Human Adenosine Deaminase Growth Factor Adenosine Deaminase Type 2 (Ada2) Complexed With Transition Analogue, Coformycin >pdb\|3LGG\|B Chain B, Crystal Structure Of Human Adenosine Deaminase Growth Factor Adenosine Deaminase Type 2 (Ada2) Complexed With Transition Analogue, Coformycin	25.2	688	9%	93	100%
ACU00111.1	V-set and transmembrane domain containing 1 isoform c [Homo sapiens]	25.2	233	4%	93	83%
3DVN_B	Chain B, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin >pdb\|3DVN\|H Chain H, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin	25.2	191	3%	93	100%
3DVG_B	Chain B, Crystal Structure Of K63-Specific Fab Apu.3a8 Bound To K63- Linked Di-Ubiquitin	25.2	191	3%	93	100%
NP_001129493.1	nuclear factor of activated T-cells, cytoplasmic 2 isoform D [Homo sapiens]	25.2	1024	13%	93	100%
A8K7I4.2	RecName: Full=Calcium-activated chloride channel regulator 1; AltName: Full=Calcium-activated chloride channel family member 1; Short=hCLCA1; AltName: Full=Calcium-activated chloride channel protein 1; Short=CaCC-1; Short=hCaCC-1; Flags: Precursor	25.2	1090	15%	93	100%
NP_001116436.1	serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform 1 [Homo sapiens]	25.2	985	14%	93	100%
Q8IUD6.2	RecName: Full=E3 ubiquitin-protein ligase RNF135; AltName: Full=RING finger protein 135; AltName: Full=Riplet; AltName: Full=RIG-I E3 ubiquitin ligase; Short=REUL	25.2	487	7%	93	100%
Q5MIZ7.1	RecName: Full=Serine/threonine-protein phosphatase 4 regulatory subunit 3B; AltName: Full=SMEK homolog 2	25.2	1016	14%	93	100%
NP_065196.1	serine/threonine-protein phosphatase 4 regulatory subunit 3B isoform 2 [Homo sapiens]	25.2	848	11%	93	100%
NP_443170.1	Fc receptor-like protein 1 isoform 1 precursor [Homo sapiens] >sp\|Q96LA6.1\|FCRL1_HUMAN RecName: Full=Fc receptor-like protein 1; Short=FcR-like protein 1; Short=FcRL1; AltName: Full=Fc receptor homolog 1; Short=FcRH1; AltName: Full=IFGP family protein 1; Short=hIFGP1; AltName: Full=Immune receptor translocation-associated protein 5; Flags: Precursor	25.2	569	10%	93	83%
AAK91824.1	MHC class II antigen [Homo sapiens]	25.2	346	4%	93	83%
NP_001152870.1	Fc receptor-like protein 1 isoform 3 precursor [Homo sapiens]	25.2	569	10%	93	83%
AAC41963.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	288	4%	93	80%
AAC41966.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	305	3%	93	83%
AAC41965.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	305	3%	93	83%
AAC41972.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	480	6%	93	83%
AAC41967.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	301	3%	93	83%
AAC41964.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	337	4%	93	83%
AAY33463.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	25.2	95.2	1%	93	100%
AAY33476.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	25.2	61.3	1%	93	100%
AAY33387.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	25.2	98.6	1%	93	100%
NP_000206.2	tyrosine-protein kinase JAK3 [Homo sapiens] >sp\|P52333.2\|JAK3_HUMAN RecName: Full=Tyrosine-protein kinase JAK3; AltName: Full=Janus kinase 3; Short=JAK-3; AltName: Full=Leukocyte janus kinase; Short=L-JAK	25.2	1160	16%	93	100%
P60509.1	RecName: Full=HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=HERV-R(b) Env protein; Includes: RecName: Full=Surface protein domain; Short=SU; Includes: RecName: Full=Transmembrane protein domain; Short=TM; Flags: Precursor	25.2	538	7%	93	100%
Q15046.3	RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA ligase; Short=LysRS	25.2	424	6%	93	100%
NP_001093256.1	intercellular adhesion molecule 2 precursor [Homo sapiens] >ref\|NP_000864.2\| intercellular adhesion molecule 2 precursor [Homo sapiens] >ref\|NP_001093257.1\| intercellular adhesion molecule 2 precursor [Homo sapiens] >ref\|NP_001093258.1\| intercellular adhesion molecule 2 precursor [Homo sapiens] >ref\|NP_001093259.1\| intercellular adhesion molecule 2 precursor [Homo sapiens] >sp\|P13598.2\|ICAM2_HUMAN RecName: Full=Intercellular adhesion molecule 2; Short=ICAM-2; AltName: CD_antigen=CD102; Flags: Precursor	25.2	369	6%	93	100%
1I85_C	Chain C, Crystal Structure Of The Ctla-4B7-2 Complex >pdb\|1I85\|D Chain D, Crystal Structure Of The Ctla-4B7-2 Complex	25.2	112	1%	93	100%
Q9BUI4.1	RecName: Full=DNA-directed RNA polymerase III subunit RPC3; Short=RNA polymerase III subunit C3; AltName: Full=DNA-directed RNA polymerase III subunit C; AltName: Full=RNA polymerase III 62 kDa subunit; Short=RPC62	25.2	592	7%	93	100%
Q08493.2	RecName: Full=cAMP-specific 3',5'-cyclic phosphodiesterase 4C; AltName: Full=DPDE1; AltName: Full=PDE21	25.2	754	10%	93	100%
NP_002103.2	histidine decarboxylase [Homo sapiens]	25.2	517	6%	93	100%
1I8L_C	Chain C, Human B7-1CTLA-4 Co-Stimulatory Complex >pdb\|1I8L\|D Chain D, Human B7-1CTLA-4 Co-Stimulatory Complex	25.2	112	1%	93	100%
NP_036472.2	nuclear factor of activated T-cells, cytoplasmic 2 isoform B [Homo sapiens]	25.2	1024	13%	93	100%
NP_775114.1	nuclear factor of activated T-cells, cytoplasmic 2 isoform C [Homo sapiens]	25.2	1039	13%	93	100%
AAC41968.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	25.2	301	3%	93	83%
AAY33454.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	24.8	130	2%	103	100%
NP_001059.2	DNA topoisomerase 2-beta [Homo sapiens]	23.1	1450	18%	406	100%
NP_001166936.1	kinesin-like protein KIF21A isoform 4 [Homo sapiens]	24.8	1548	19%	125	100%
NP_001166934.1	kinesin-like protein KIF21A isoform 3 [Homo sapiens]	24.8	1548	19%	125	100%
P17927.3	RecName: Full=Complement receptor type 1; AltName: Full=C3b/C4b receptor; AltName: CD_antigen=CD35; Flags: Precursor	24.8	2009	18%	125	100%
NP_060876.5	mucin-4 isoform a [Homo sapiens]	24.8	3511	34%	125	100%
NP_001138984.1	nuclear factor 1 A-type isoform 4 [Homo sapiens]	24.8	455	6%	125	100%
NP_004122.2	granzyme B precursor [Homo sapiens]	24.8	309	4%	125	100%
2VV0_A	Chain A, Hppargamma Ligand Binding Domain In Complex With Dha >pdb\|2VV0\|B Chain B, Hppargamma Ligand Binding Domain In Complex With Dha	24.8	210	3%	125	100%
Q92545.2	RecName: Full=Transmembrane protein 131; AltName: Full=Protein RW1	24.8	1934	23%	125	100%
2Z7X_B	Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide	24.8	494	8%	125	100%
2Q7Z_A	Chain A, Solution Structure Of The 30 Scr Domains Of Human Complement Receptor 1	24.8	1849	16%	125	100%
NP_001152767.1	adenosine deaminase domain-containing protein 1 isoform 3 [Homo sapiens]	24.8	514	8%	125	100%
NP_001164102.1	high affinity immunoglobulin alpha and immunoglobulin mu Fc receptor isoform b [Homo sapiens]	24.8	485	7%	125	100%
NP_001138983.1	nuclear factor 1 A-type isoform 3 [Homo sapiens]	24.8	382	5%	125	100%
NP_002364.5	microtubule-associated protein 1A [Homo sapiens]	24.8	2817	30%	125	100%
NP_543006.2	signal-regulatory protein gamma isoform 2 precursor [Homo sapiens]	24.8	202	3%	125	80%
NP_061026.2	signal-regulatory protein gamma isoform 1 precursor [Homo sapiens]	24.8	337	5%	125	83%
NP_060111.2	kinesin-like protein KIF21A isoform 2 [Homo sapiens]	24.8	1564	19%	125	100%
NP_000642.3	complement receptor type 1 isoform S precursor [Homo sapiens]	24.8	2342	18%	125	100%
NP_000564.2	complement receptor type 1 isoform F precursor [Homo sapiens]	24.8	1993	18%	125	100%
NP_005876.2	E3 ubiquitin-protein ligase MARCH6 [Homo sapiens]	24.8	1384	16%	125	100%
Q8WWV6.1	RecName: Full=High affinity immunoglobulin alpha and immunoglobulin mu Fc receptor; AltName: Full=Fc alpha/mu receptor; Flags: Precursor >gb\|AAL51154.1\| Fc alpha/mu receptor [Homo sapiens]	24.8	465	7%	125	100%
Q15399.3	RecName: Full=Toll-like receptor 1; AltName: Full=Toll/interleukin-1 receptor-like protein; Short=TIL; AltName: CD_antigen=CD281; Flags: Precursor	24.8	815	12%	125	100%
NP_002903.3	DNA polymerase zeta catalytic subunit [Homo sapiens]	24.8	3388	40%	125	100%
NP_758962.1	L-amino-acid oxidase isoform 2 [Homo sapiens]	24.8	443	7%	125	100%
NP_443171.2	Fc receptor-like protein 3 precursor [Homo sapiens] >sp\|Q96P31.1\|FCRL3_HUMAN RecName: Full=Fc receptor-like protein 3; Short=FcR-like protein 3; Short=FcRL3; AltName: Full=Fc receptor homolog 3; Short=FcRH3; AltName: Full=IFGP family protein 3; Short=hIFGP3; AltName: Full=Immune receptor translocation-associated protein 3; AltName: Full=SH2 domain-containing phosphatase anchor protein 2; Flags: Precursor	24.8	791	10%	125	85%
NP_058197.2	2'-5'-oligoadenylate synthase 2 isoform 1 [Homo sapiens]	24.8	442	6%	125	100%
NP_005586.1	nuclear factor 1 A-type isoform 2 [Homo sapiens]	24.8	399	5%	125	100%
AAR23323.1	endogenous granzyme B precursor [Homo sapiens]	24.8	381	5%	125	100%
NP_001269.3	inhibitor of nuclear factor kappa-B kinase subunit alpha [Homo sapiens]	24.8	814	9%	125	100%
NP_001152757.1	adenosine deaminase domain-containing protein 1 isoform 2 [Homo sapiens]	24.8	464	7%	125	100%
NP_001034597.1	signal-regulatory protein gamma isoform 3 precursor [Homo sapiens]	24.8	319	5%	125	83%
NP_075573.2	calpain-10 isoform c [Homo sapiens]	24.8	666	9%	125	100%
NP_690863.1	L-amino-acid oxidase isoform 1 precursor [Homo sapiens] >sp\|Q96RQ9.1\|OXLA_HUMAN RecName: Full=L-amino-acid oxidase; Short=LAAO; Short=LAO; AltName: Full=Interleukin-4-induced protein 1; Short=IL4-induced protein 1; AltName: Full=Protein Fig-1; Short=hFIG1; Flags: Precursor	24.8	422	6%	125	100%
NP_002526.2	2'-5'-oligoadenylate synthase 2 isoform 2 [Homo sapiens]	24.8	474	7%	125	100%
NP_037503.2	interleukin-19 isoform 2 precursor [Homo sapiens]	24.8	258	3%	125	100%
NP_987099.1	C-type lectin domain family 4 member C isoform 2 [Homo sapiens]	24.8	214	2%	125	83%
1ZGL_M	Chain M, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|Q Chain Q, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|S Chain S, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|U Chain U, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a	24.8	253	3%	125	100%
JC8058	laeverin - human	24.8	1261	16%	125	100%
NP_001166935.1	kinesin-like protein KIF21A isoform 1 [Homo sapiens]	24.8	1565	20%	125	100%
NP_715639.1	interleukin-19 isoform 1 precursor [Homo sapiens]	24.8	323	4%	125	100%
NP_005794.1	flotillin-1 [Homo sapiens]	24.8	332	5%	125	100%
NP_001287.2	chemokine-binding protein 2 [Homo sapiens]	24.8	700	11%	125	100%
NP_001128145.1	nuclear factor 1 A-type isoform 1 [Homo sapiens]	24.8	399	5%	125	100%
NP_055213.2	lysosome-associated membrane glycoprotein 3 [Homo sapiens]	24.8	348	5%	125	100%
P10144.1	RecName: Full=Granzyme B; AltName: Full=Granzyme-2; AltName: Full=T-cell serine protease 1-3E; AltName: Full=Cytotoxic T-lymphocyte proteinase 2; Short=Lymphocyte protease; AltName: Full=SECT; AltName: Full=Cathepsin G-like 1; Short=CTSGL1; AltName: Full=CTLA-1; AltName: Full=Fragmentin-2; AltName: Full=Human lymphocyte protein; Short=HLP; AltName: Full=C11; Flags: Precursor	24.8	294	4%	125	100%
NP_077305.2	EF-hand domain-containing protein D2 [Homo sapiens]	24.8	219	3%	125	83%
P14222.1	RecName: Full=Perforin-1; Short=P1; AltName: Full=Lymphocyte pore-forming protein; Short=PFP; AltName: Full=Cytolysin; Flags: Precursor	24.8	663	8%	125	100%
NP_640336.1	adenosine deaminase domain-containing protein 1 isoform 1 [Homo sapiens]	24.8	514	8%	125	100%
NP_002913.3	regulator of G-protein signaling 1 [Homo sapiens]	24.8	238	3%	125	100%
NP_569708.1	C-type lectin domain family 4 member C isoform 1 [Homo sapiens]	24.8	299	3%	125	83%
1N1F_A	Chain A, Crystal Structure Of Human Interleukin-19	24.8	241	2%	125	100%
Q14330.2	RecName: Full=N-arachidonyl glycine receptor; Short=NAGly receptor; AltName: Full=G-protein coupled receptor 18	24.8	504	10%	125	100%
1O0V_A	Chain A, The Crystal Structure Of Ige Fc Reveals An Asymmetrically Bent Conformation >pdb\|1O0V\|B Chain B, The Crystal Structure Of Ige Fc Reveals An Asymmetrically Bent Conformation	24.8	301	4%	125	100%
NP_075571.1	calpain-10 isoform a [Homo sapiens]	24.8	827	11%	125	100%
P15056.4	RecName: Full=Serine/threonine-protein kinase B-raf; AltName: Full=Proto-oncogene B-Raf; AltName: Full=p94; AltName: Full=v-Raf murine sarcoma viral oncogene homolog B1	24.8	835	11%	125	100%
ABG38378.1	immunoglobulin light chain variable region [Homo sapiens]	21.4	92.7	1%	133	85%
NP_742086.1	TNFSF12-TNFSF13 protein [Homo sapiens]	21.8	381	5%	145	100%
NP_001035196.1	voltage-gated hydrogen channel 1 [Homo sapiens] >ref\|NP_115745.2\| voltage-gated hydrogen channel 1 [Homo sapiens] >sp\|Q96D96.1\|HVCN1_HUMAN RecName: Full=Voltage-gated hydrogen channel 1; AltName: Full=Hydrogen voltage-gated channel 1; Short=HV1; AltName: Full=Voltage sensor domain-only protein	24.4	395	5%	149	100%
AAL90442.1	APRIL [Homo sapiens]	21.8	148	2%	151	100%
3HI5_L	Chain L, Crystal Structure Of Fab Fragment Of Al-57	24.0	233	3%	155	100%
3K6S_A	Chain A, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K6S\|C Chain C, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K6S\|E Chain E, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K6S\|G Chain G, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K71\|A Chain A, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K71\|C Chain C, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K71\|E Chain E, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K71\|G Chain G, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K72\|A Chain A, Structure Of Integrin Alphax Beta2 >pdb\|3K72\|C Chain C, Structure Of Integrin Alphax Beta2	24.4	1120	14%	168	100%
1G84_A	Chain A, The Solution Structure Of The C Epsilon2 Domain From Ige	24.4	92.3	1%	168	100%
NP_001153891.1	Z-DNA-binding protein 1 isoform d [Homo sapiens]	24.4	330	5%	168	85%
NP_001153889.1	Z-DNA-binding protein 1 isoform b [Homo sapiens]	24.4	413	6%	168	100%
Q13936.3	RecName: Full=Voltage-dependent L-type calcium channel subunit alpha-1C; AltName: Full=Voltage-gated calcium channel subunit alpha Cav1.2; AltName: Full=Calcium channel, L type, alpha-1 polypeptide, isoform 1, cardiac muscle	24.4	2563	31%	168	100%
2G2B_A	Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1	24.4	140	1%	168	85%
NP_072086.2	matrix metalloproteinase-16 isoform 2 preproprotein [Homo sapiens]	24.4	428	5%	168	100%
NP_001129074.1	beta-galactosidase isoform c preproprotein [Homo sapiens]	24.4	472	5%	168	100%
EAW57221.1	immunity-related GTPase family, cinema, isoform CRA_a [Homo sapiens]	24.4	487	8%	168	100%
NP_000395.2	beta-galactosidase isoform a preproprotein [Homo sapiens]	24.4	649	8%	168	100%
AAH33853.1	IRGC protein [Homo sapiens]	24.4	352	6%	168	100%
NP_002223.3	potassium voltage-gated channel subfamily A member 3 [Homo sapiens]	24.4	672	9%	168	100%
NP_006010.2	V-type proton ATPase 116 kDa subunit a isoform 3 isoform a [Homo sapiens] >sp\|Q13488.3\|VPP3_HUMAN RecName: Full=V-type proton ATPase 116 kDa subunit a isoform 3; Short=V-ATPase 116 kDa isoform a3; AltName: Full=Vacuolar proton translocating ATPase 116 kDa subunit a isoform 3; AltName: Full=Osteoclastic proton pump 116 kDa subunit; Short=OC-116 kDa; Short=OC116; AltName: Full=T-cell immune regulator 1; AltName: Full=T-cell immune response cDNA7 protein; Short=TIRC7 >gb\|AAH18133.1\| T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 [Homo sapiens] >gb\|AAH32465.1\| T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 [Homo sapiens] >gb\|EAW74691.1\| T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, isoform CRA_c [Homo sapiens] >gb\|EAW74692.1\| T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, isoform CRA_c [Homo sapiens]	24.4	1110	15%	168	100%
NP_835488.1	CUB domain-containing protein 1 isoform 2 [Homo sapiens]	24.4	388	5%	168	100%
NP_000878.2	integrin alpha-X precursor [Homo sapiens]	24.4	1159	15%	168	100%
NP_777601.2	scavenger receptor cysteine-rich type 1 protein M160 precursor [Homo sapiens]	24.4	1252	14%	168	100%
AAH04887.2	LANCL2 protein [Homo sapiens]	24.4	230	4%	168	100%
AAC43024.1	anti-mucin1 heavy chain variable region [Homo sapiens]	24.4	128	2%	168	100%
AAA36074.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	24.4	113	1%	168	80%
NP_036439.2	band 4.1-like protein 3 [Homo sapiens]	24.4	1176	18%	168	100%
AAY57174.1	immunoglobulin heavy chain variable region [Homo sapiens]	24.4	200	3%	168	80%
AAY33399.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	24.4	60.5	1%	168	100%
AAY16596.1	immunoglobulin kappa light chain [Homo sapiens]	24.4	174	2%	168	80%
AAU20795.1	T-cell immune regulator 1 transcript variant 4 [Homo sapiens]	24.4	301	4%	168	100%
AAS59834.1	T-cell immune regulator 1 transcript variant 4 [Homo sapiens]	24.4	129	1%	168	80%
NP_055830.1	lysine-specific demethylase 4B [Homo sapiens]	24.4	793	10%	168	100%
NP_073753.3	CUB domain-containing protein 1 isoform 1 [Homo sapiens]	24.4	922	12%	168	100%
NP_996808.1	carbonic anhydrase 12 isoform 2 precursor [Homo sapiens]	24.4	394	5%	168	100%
NP_062558.1	interferon-inducible GTPase 5 [Homo sapiens] >sp\|Q6NXR0.1\|IIGP5_HUMAN RecName: Full=Interferon-inducible GTPase 5; AltName: Full=Immunity-related GTPase cinema 1 >gb\|AAC34467.1\| R30953_1 [Homo sapiens] >gb\|AAH66939.1\| Immunity-related GTPase family, cinema [Homo sapiens] >gb\|EAW57222.1\| immunity-related GTPase family, cinema, isoform CRA_b [Homo sapiens]	24.4	420	7%	168	100%
NP_077288.2	N-acetylglucosamine-1-phosphotransferase subunits alpha/beta precursor [Homo sapiens] >sp\|Q3T906.1\|GNPTA_HUMAN RecName: Full=N-acetylglucosamine-1-phosphotransferase subunits alpha/beta; AltName: Full=GlcNAc-1-phosphotransferase subunits alpha/beta; AltName: Full=Stealth protein GNPTAB; AltName: Full=UDP-N-acetylglucosamine-1-phosphotransferase subunits alpha/beta; Contains: RecName: Full=N-acetylglucosamine-1-phosphotransferase subunit alpha; Contains: RecName: Full=N-acetylglucosamine-1-phosphotransferase subunit beta; Flags: Precursor	24.4	1472	18%	168	100%
P60507.1	RecName: Full=HERV-F(c)1_Xq21.33 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=Fc1env; AltName: Full=HERV-Fc1env; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor	24.4	761	10%	168	100%
CAD88761.1	immunoglobulin heavy chain [Homo sapiens]	24.4	88.9	0%	168	100%
P42830.1	RecName: Full=C-X-C motif chemokine 5; AltName: Full=Small-inducible cytokine B5; AltName: Full=Epithelial-derived neutrophil-activating protein 78; AltName: Full=Neutrophil-activating peptide ENA-78; AltName: Full=ENA-78(1-78); Contains: RecName: Full=ENA-78(8-78); Contains: RecName: Full=ENA-78(9-78); Flags: Precursor	24.4	163	3%	168	100%
NP_005932.2	matrix metalloproteinase-16 isoform 1 preproprotein [Homo sapiens]	24.4	565	7%	168	100%
NP_996890.1	chemokine (C-C motif) ligand 4-like 2 precursor [Homo sapiens] >ref\|NP_001001435.1\| C-C motif chemokine 4-like precursor [Homo sapiens]	24.4	145	3%	168	83%
P57075.1	RecName: Full=Ubiquitin-associated and SH3 domain-containing protein A; AltName: Full=Suppressor of T-cell receptor signaling 2; Short=STS-2; AltName: Full=Cbl-interacting protein 4; Short=CLIP4; AltName: Full=T-cell ubiquitin ligand; Short=TULA	24.4	695	9%	168	100%
NP_001209.1	carbonic anhydrase 12 isoform 1 precursor [Homo sapiens] >gb\|AAC39789.1\| carbonic anhydrase XII precursor [Homo sapiens]	24.4	394	5%	168	100%
NP_003766.1	sphingosine 1-phosphate receptor 4 precursor [Homo sapiens]	24.4	513	7%	168	100%
Q9BZM6.1	RecName: Full=NKG2D ligand 1; Short=NKG2DL1; Short=N2DL-1; AltName: Full=UL16-binding protein 1; AltName: Full=ALCAN-beta; AltName: Full=Retinoic acid early transcript 1I; Flags: Precursor	24.4	376	4%	168	100%
NP_004075.1	neutrophil defensin 1 preproprotein [Homo sapiens]	24.4	195	2%	168	100%
NP_110403.2	Z-DNA-binding protein 1 isoform a [Homo sapiens]	24.4	429	7%	168	100%
NP_112477.1	C-C chemokine receptor type 9 isoform A [Homo sapiens]	24.4	561	8%	168	100%
NP_006632.2	C-C chemokine receptor type 9 isoform B [Homo sapiens]	24.4	561	8%	168	100%
NP_005726.1	beta-centractin [Homo sapiens]	24.4	398	5%	168	100%
NP_004933.1	beta-defensin 4A precursor [Homo sapiens]	24.4	136	2%	168	83%
NP_061167.1	lanC-like protein 2 [Homo sapiens]	24.4	365	5%	168	100%
NP_001174.2	V-type proton ATPase subunit S1 precursor [Homo sapiens]	24.4	648	9%	168	100%
NP_055679.1	glycosaminoglycan xylosylkinase precursor [Homo sapiens]	24.4	348	4%	168	100%
NP_008978.2	butyrophilin subfamily 3 member A2 precursor [Homo sapiens]	21.8	395	5%	186	100%
Q13191.2	RecName: Full=E3 ubiquitin-protein ligase CBL-B; AltName: Full=Signal transduction protein CBL-B; AltName: Full=SH3-binding protein CBL-B; AltName: Full=Casitas B-lineage lymphoma proto-oncogene b; AltName: Full=RING finger protein 56	21.4	963	12%	196	100%
NP_001075042.1	GRB2-associated-binding protein 3 isoform 1 [Homo sapiens]	23.1	852	10%	216	100%
NP_542179.1	GRB2-associated-binding protein 3 isoform 2 [Homo sapiens]	23.1	852	10%	216	100%
2RCJ_C	Chain C, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|D Chain D, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|G Chain G, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|H Chain H, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|K Chain K, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|L Chain L, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|O Chain O, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|P Chain P, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|S Chain S, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|T Chain T, Solution Structure Of Human Immunoglobulin M	23.1	491	7%	220	100%
1HZH_H	Chain H, Crystal Structure Of The Intact Human Igg B12 With Broad And Potent Activity Against Primary Hiv-1 Isolates: A Template For Hiv Vaccine Design >pdb\|1HZH\|K Chain K, Crystal Structure Of The Intact Human Igg B12 With Broad And Potent Activity Against Primary Hiv-1 Isolates: A Template For Hiv Vaccine Design	23.1	404	5%	225	100%
3L5H_A	Chain A, Crystal Structure Of The Full Ectodomain Of Human Gp130: New Into The Molecular Assembly Of Receptor Complexes	24.0	436	7%	225	85%
3L5J_A	Chain A, Crystal Structure Of Fniii Domains Of Human Gp130 (Domains 4 >pdb\|3L5J\|B Chain B, Crystal Structure Of Fniii Domains Of Human Gp130 (Domains 4	24.0	243	4%	225	83%
3L5I_A	Chain A, Crystal Structure Of Fniii Domains Of Human Gp130 (Domains 4	24.0	246	4%	225	83%
NP_742011.2	tumor necrosis factor ligand superfamily member 14 isoform 2 [Homo sapiens]	24.0	178	2%	225	100%
3LXW_A	Chain A, Crystal Structure Of Human Gtpase Imap Family Member 1 >pdb\|3LXW\|B Chain B, Crystal Structure Of Human Gtpase Imap Family Member 1	24.0	142	1%	225	83%
NP_001164632.1	sialic acid-binding Ig-like lectin 10 isoform 7 precursor [Homo sapiens]	24.0	585	8%	225	100%
NP_001164631.1	sialic acid-binding Ig-like lectin 10 isoform 6 precursor [Homo sapiens]	24.0	634	9%	225	100%
NP_001164629.1	sialic acid-binding Ig-like lectin 10 isoform 4 precursor [Homo sapiens]	24.0	682	10%	225	100%
3G3N_A	Chain A, Pde7a Catalytic Domain In Complex With 3-(2,6- Difluorophenyl)-2-(Methylthio)quinazolin-4(3h)-One	24.0	344	4%	225	100%
3FXI_C	Chain C, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex >pdb\|3FXI\|D Chain D, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex	24.0	231	2%	225	100%
3FFC_D	Chain D, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR >pdb\|3FFC\|I Chain I, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR	24.0	300	4%	225	100%
3FCS_A	Chain A, Structure Of Complete Ectodomain Of Integrin Aiibb3 >pdb\|3FCS\|C Chain C, Structure Of Complete Ectodomain Of Integrin Aiibb3	24.0	972	14%	225	100%
CAR62967.1	immunoglobulin heavy chain variable region [Homo sapiens]	24.0	130	2%	225	83%
CAR62765.1	immunoglobulin heavy chain variable region [Homo sapiens]	24.0	91.0	1%	225	80%
NP_002964.3	ataxin-2 [Homo sapiens]	24.0	1448	17%	225	100%
2Z65_C	Chain C, Crystal Structure Of The Human Tlr4 Tv3 Hybrid-Md-2-Eritoran Complex >pdb\|2Z65\|D Chain D, Crystal Structure Of The Human Tlr4 Tv3 Hybrid-Md-2-Eritoran Complex	24.0	231	2%	225	100%
2PYF_A	Chain A, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Revealnative Diagonal Binding Geometry Unbound Tcr Clone 5-1	24.0	281	3%	225	100%
2PYE_D	Chain D, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Revealnative Diagonal Binding Geometry Tcr Clone C5c1 Complexed With Mhc	24.0	281	3%	225	100%
2P5W_D	Chain D, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry	24.0	267	3%	225	100%
2P5E_D	Chain D, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry	24.0	264	3%	225	100%
2OZ4_A	Chain A, Structural Plasticity In Igsf Domain 4 Of Icam-1 Mediates Cell Surface Dimerization	24.0	281	3%	225	100%
NP_056179.2	lymphocyte antigen 96 precursor [Homo sapiens] >sp\|Q9Y6Y9.2\|LY96_HUMAN RecName: Full=Lymphocyte antigen 96; Short=Ly-96; AltName: Full=Protein MD-2; AltName: Full=ESOP-1; Flags: Precursor	24.0	267	3%	225	100%
NP_001164630.1	sialic acid-binding Ig-like lectin 10 isoform 5 precursor [Homo sapiens]	24.0	682	10%	225	100%
NP_001164627.1	sialic acid-binding Ig-like lectin 10 isoform 2 precursor [Homo sapiens]	24.0	721	10%	225	100%
NP_037456.5	cytokine-inducible SH2-containing protein isoform 1 [Homo sapiens]	24.0	306	3%	225	100%
Q8TCG1.2	RecName: Full=Protein CIP2A; AltName: Full=Cancerous inhibitor of PP2A; AltName: Full=p90 autoantigen	24.0	1036	18%	225	100%
NP_004466.2	flotillin-2 [Homo sapiens]	24.0	296	4%	225	100%
NP_055856.1	clusterin-associated protein 1 isoform 1 [Homo sapiens]	24.0	567	9%	225	100%
AAT80894.1	placenta cross-immune reaction antigen [Homo sapiens]	24.0	136	2%	225	83%
NP_067081.2	interleukin-22 receptor subunit alpha-1 precursor [Homo sapiens] >sp\|Q8N6P7.1\|I22R1_HUMAN RecName: Full=Interleukin-22 receptor subunit alpha-1; Short=IL-22 receptor subunit alpha-1; Short=IL-22R-alpha-1; Short=IL-22RA1; AltName: Full=Cytokine receptor family 2 member 9; Short=CRF2-9; AltName: Full=Cytokine receptor class-II member 9; AltName: Full=ZcytoR11; Flags: Precursor	24.0	626	9%	225	100%
NP_149121.2	sialic acid-binding Ig-like lectin 10 isoform 1 precursor [Homo sapiens] >sp\|Q96LC7.3\|SIG10_HUMAN RecName: Full=Sialic acid-binding Ig-like lectin 10; Short=Siglec-10; AltName: Full=Siglec-like protein 2; Flags: Precursor >gb\|AAM83254.1\|AF301007_1 sialic acid-binding immunoglobin-like lectin 10 [Homo sapiens]	24.0	738	10%	225	100%
NP_002595.1	high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A isoform b [Homo sapiens]	24.0	475	6%	225	100%
Q9NQ38.2	RecName: Full=Serine protease inhibitor Kazal-type 5; AltName: Full=Lympho-epithelial Kazal-type-related inhibitor; Short=LEKTI; Contains: RecName: Full=Hemofiltrate peptide HF6478; Contains: RecName: Full=Hemofiltrate peptide HF7665; Flags: Precursor	24.0	802	9%	225	100%
AAH08965.2	BAZ2A protein [Homo sapiens]	24.0	939	12%	225	100%
NP_001171744.1	carcinoembryonic antigen-related cell adhesion molecule 1 isoform 3 precursor [Homo sapiens]	24.0	434	5%	225	100%
NP_001164628.1	sialic acid-binding Ig-like lectin 10 isoform 3 precursor [Homo sapiens]	24.0	699	10%	225	100%
NP_338599.1	three prime repair exonuclease 1 isoform b [Homo sapiens]	24.0	266	3%	225	100%
NP_005548.2	keratin, type I cytoskeletal 16 [Homo sapiens]	24.0	418	6%	225	100%
NP_001171745.1	carcinoembryonic antigen-related cell adhesion molecule 1 isoform 5 precursor [Homo sapiens]	24.0	317	4%	225	100%
NP_003798.2	tumor necrosis factor ligand superfamily member 14 isoform 1 precursor [Homo sapiens]	24.0	195	2%	225	100%
AAK26160.1	delta transmembrane LIGHT [Homo sapiens]	24.0	199	2%	225	100%
NP_938023.1	transmembrane protein 173 [Homo sapiens] >sp\|Q86WV6.1\|TM173_HUMAN RecName: Full=Transmembrane protein 173; AltName: Full=Stimulator of interferon genes protein; Short=hSTING; AltName: Full=Mediator of IRF3 activation; Short=hMITA	24.0	434	5%	225	100%
NP_001020083.1	carcinoembryonic antigen-related cell adhesion molecule 1 isoform 2 precursor [Homo sapiens]	24.0	440	6%	225	100%
AAB20493.1	T-cell V beta 17, TCR Vbeta17 [human, 1013-1 synovial T cells, Peptide Partial, 18 aa]	24.0	39.9	0%	225	87%
NP_008840.1	ras-specific guanine nucleotide-releasing factor 2 [Homo sapiens]	24.0	1502	19%	225	100%
NP_002594.1	high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A isoform a [Homo sapiens]	24.0	515	6%	225	100%
Q5H9R7.2	RecName: Full=Serine/threonine-protein phosphatase 6 regulatory subunit 3; AltName: Full=SAPS domain family member 3; AltName: Full=Sporulation-induced transcript 4-associated protein SAPL	24.0	1058	14%	225	100%
NP_998767.1	sialic acid-binding Ig-like lectin 15 precursor [Homo sapiens] >sp\|Q6ZMC9.1\|SIG15_HUMAN RecName: Full=Sialic acid-binding Ig-like lectin 15; Short=Siglec-15; AltName: Full=CD33 antigen-like 3; Flags: Precursor	24.0	199	3%	225	83%
Q8N8S7.2	RecName: Full=Protein enabled homolog	24.0	936	8%	225	100%
CAD89242.1	immunoglobulin heavy chain [Homo sapiens]	24.0	106	1%	225	100%
NP_060496.2	phosphofurin acidic cluster sorting protein 1 [Homo sapiens]	24.0	875	12%	225	100%
CAD88710.1	immunoglobulin lambda light chain variable region [Homo sapiens]	24.0	105	1%	225	100%
CAD88726.1	immunoglobulin lambda light chain variable region [Homo sapiens]	24.0	105	1%	225	100%
Q9NW08.2	RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA polymerase III subunit C2; AltName: Full=DNA-directed RNA polymerase III subunit B; AltName: Full=DNA-directed RNA polymerase III 127.6 kDa polypeptide; AltName: Full=C128	24.0	1069	13%	225	100%
Q8TF05.1	RecName: Full=Serine/threonine-protein phosphatase 4 regulatory subunit 1	24.0	916	11%	225	100%
NP_065071.1	zinc finger MIZ domain-containing protein 1 [Homo sapiens]	24.0	936	12%	225	100%
NP_057224.2	tubulin polymerization-promoting protein family member 3 [Homo sapiens] >ref\|NP_057048.2\| tubulin polymerization-promoting protein family member 3 [Homo sapiens]	24.0	132	2%	225	100%
NP_001026854.1	splicing factor, arginine/serine-rich 7 [Homo sapiens]	24.0	368	4%	225	100%
NP_003356.2	cytochrome b-c1 complex subunit 1, mitochondrial precursor [Homo sapiens]	24.0	466	6%	225	100%
NP_542782.1	scavenger receptor cysteine-rich domain-containing group B protein precursor [Homo sapiens]	24.0	369	5%	225	100%
NP_000192.2	intercellular adhesion molecule 1 precursor [Homo sapiens]	24.0	567	7%	225	100%
NP_000949.1	prostaglandin E2 receptor EP4 subtype [Homo sapiens]	24.0	565	9%	225	85%
NP_079058.1	non-homologous end-joining factor 1 [Homo sapiens]	24.0	326	3%	225	100%
NP_079069.1	clusterin-associated protein 1 isoform 2 [Homo sapiens]	24.0	399	7%	225	80%
NP_002021.3	N-formyl peptide receptor 3 [Homo sapiens]	24.0	661	8%	225	100%
O43557.1	RecName: Full=Tumor necrosis factor ligand superfamily member 14; AltName: Full=Herpes virus entry mediator ligand; Short=Herpesvirus entry mediator ligand; Short=HVEM-L; AltName: CD_antigen=CD258; Contains: RecName: Full=Tumor necrosis factor ligand superfamily member 14, membrane form; Contains: RecName: Full=Tumor necrosis factor ligand superfamily member 14, soluble form	24.0	216	3%	225	100%
NP_001703.2	carcinoembryonic antigen-related cell adhesion molecule 1 isoform 1 precursor [Homo sapiens]	24.0	544	7%	225	100%
NP_057465.1	three prime repair exonuclease 1 isoform a [Homo sapiens]	24.0	303	4%	225	100%
NP_001171742.1	carcinoembryonic antigen-related cell adhesion molecule 1 isoform 4 precursor [Homo sapiens]	24.0	420	5%	225	100%
1FH5_H	Chain H, Crystal Structure Of The Fab Fragment Of The Monoclonal Antibody Mak33	24.0	216	2%	225	80%
Q9UQF0.1	RecName: Full=HERV-W_7q21.2 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein gPr73; AltName: Full=HERV-7q Envelope protein; AltName: Full=HERV-W envelope protein; AltName: Full=Syncytin; AltName: Full=Syncytin-1; AltName: Full=Enverin; AltName: Full=Env-W; Contains: RecName: Full=Surface protein; Short=SU; AltName: Full=gp50; Contains: RecName: Full=Transmembrane protein; Short=TM; AltName: Full=gp24; Flags: Precursor	24.0	805	11%	225	100%
NP_002891.1	retinol-binding protein 3 precursor [Homo sapiens]	24.0	1087	14%	225	100%
NP_110391.2	Fc receptor-like protein 2 precursor [Homo sapiens]	24.0	566	7%	225	100%
NP_659508.1	cytokine-inducible SH2-containing protein isoform 2 [Homo sapiens]	24.0	306	3%	225	100%
NP_000957.1	retinoic acid receptor gamma isoform 1 [Homo sapiens]	24.0	515	6%	225	100%
NP_000549.1	hemoglobin subunit alpha [Homo sapiens]	24.0	55.8	1%	225	80%
1WIO_A	Chain A, Structure Of T-Cell Surface Glycoprotein Cd4, Tetragonal Crystal Form >pdb\|1WIO\|B Chain B, Structure Of T-Cell Surface Glycoprotein Cd4, Tetragonal Crystal Form >pdb\|1WIP\|A Chain A, Structure Of T-Cell Surface Glycoprotein Cd4, Monoclinic Crystal Form >pdb\|1WIP\|B Chain B, Structure Of T-Cell Surface Glycoprotein Cd4, Monoclinic Crystal Form >pdb\|1WIQ\|A Chain A, Structure Of T-Cell Surface Glycoprotein Cd4, Trigonal Crystal Form >pdb\|1WIQ\|B Chain B, Structure Of T-Cell Surface Glycoprotein Cd4, Trigonal Crystal Form	24.0	437	5%	225	100%
NP_003256.1	toll-like receptor 3 precursor [Homo sapiens] >sp\|O15455.1\|TLR3_HUMAN RecName: Full=Toll-like receptor 3; AltName: CD_antigen=CD283; Flags: Precursor	24.0	1000	11%	225	100%
NP_001036193.1	retinoic acid receptor gamma isoform 2 [Homo sapiens]	24.0	454	5%	225	100%
NP_001318.1	cancer/testis antigen 1 [Homo sapiens]	24.0	200	2%	225	100%
NP_003017.1	endophilin-A1 [Homo sapiens]	24.0	352	4%	225	100%
NP_005658.1	E3 ubiquitin-protein ligase RNF103 [Homo sapiens] >sp\|O00237.1\|RN103_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF103; AltName: Full=RING finger protein 103; AltName: Full=Zinc finger protein 103 homolog; Short=Zfp-103; AltName: Full=KF-1; Short=hKF-1	24.0	721	10%	225	100%
1MQ8_A	Chain A, Crystal Structure Of Alphal I Domain In Complex With Icam-1 >pdb\|1MQ8\|C Chain C, Crystal Structure Of Alphal I Domain In Complex With Icam-1	24.0	324	4%	225	100%
NP_005466.1	SH2B adapter protein 3 [Homo sapiens] >sp\|Q9UQQ2.2\|SH2B3_HUMAN RecName: Full=SH2B adapter protein 3; AltName: Full=Lymphocyte-specific adapter protein Lnk; AltName: Full=Signal transduction protein Lnk; AltName: Full=Lymphocyte adapter protein	24.0	812	9%	225	100%
2ZCH_P	Chain P, Crystal Structure Of Human Prostate Specific Antigen Complexed With An Activating Antibody >pdb\|2ZCK\|P Chain P, Crystal Structure Of A Ternary Complex Between Psa, A Substrat-Acyl Intermediate And An Activating Antibody >pdb\|2ZCL\|P Chain P, Crystal Structure Of Human Prostate Specific Antigen Complexed With An Activating Antibody	24.0	143	2%	225	83%
NP_660186.1	dual specificity mitogen-activated protein kinase kinase 7 [Homo sapiens]	24.0	444	6%	225	100%
NP_149053.1	caytaxin [Homo sapiens]	24.0	277	3%	225	100%
AAG00910.2	recombinant IgG2 heavy chain [Homo sapiens]	23.1	379	4%	226	100%
AAG00912.1	recombinant IgG4 heavy chain [Homo sapiens]	23.1	386	6%	232	100%
1ZA6_B	Chain B, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody >pdb\|1ZA6\|D Chain D, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody >pdb\|1ZA6\|F Chain F, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody >pdb\|1ZA6\|H Chain H, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody	23.1	313	4%	237	100%
CAC20454.1	immunoglobulin heavy chain constant region gamma 1 [Homo sapiens]	23.1	313	4%	238	100%
AAG00909.1	recombinant IgG1 heavy chain [Homo sapiens]	23.1	313	4%	239	100%
CAC20457.1	immunoglobulin heavy chain constant region gamma 4 [Homo sapiens]	23.1	341	4%	239	100%
CAC20455.1	immunoglobulin heavy chain constant region gamma 2 [Homo sapiens]	23.1	230	2%	239	100%
2J6E_A	Chain A, Crystal Structure Of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc Epitope And Evidence For Affinity Maturation >pdb\|2J6E\|B Chain B, Crystal Structure Of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc Epitope And Evidence For Affinity Maturation	23.1	212	2%	253	100%
NP_612202.1	NACHT, LRR and PYD domains-containing protein 6 [Homo sapiens]	23.1	930	13%	253	100%
2GJ7_A	Chain A, Crystal Structure Of A Ge-GiFC COMPLEX >pdb\|2GJ7\|B Chain B, Crystal Structure Of A Ge-GiFC COMPLEX	23.1	211	2%	254	100%
2QL1_A	Chain A, Structural Characterization Of A Mutated, Adcc-Enhanced Human Fc Fragment	23.1	228	2%	254	100%
1T83_A	Chain A, Crystal Structure Of A Human Type Iii Fc Gamma Receptor In Complex With An Fc Fragment Of Igg1 (Orthorhombic) >pdb\|1T83\|B Chain B, Crystal Structure Of A Human Type Iii Fc Gamma Receptor In Complex With An Fc Fragment Of Igg1 (Orthorhombic) >pdb\|1T89\|A Chain A, Crystal Structure Of A Human Type Iii Fc Gamma Receptor In Complex With An Fc Fragment Of Igg1 (Hexagonal) >pdb\|1T89\|B Chain B, Crystal Structure Of A Human Type Iii Fc Gamma Receptor In Complex With An Fc Fragment Of Igg1 (Hexagonal)	23.1	211	2%	255	100%
2DTQ_A	Chain A, Crystal Structure Of The Fucosylated Fc Fragment From Human Immunoglobulin G1 >pdb\|2DTQ\|B Chain B, Crystal Structure Of The Fucosylated Fc Fragment From Human Immunoglobulin G1 >pdb\|2DTS\|A Chain A, Crystal Structure Of The Defucosylated Fc Fragment From Human Immunoglobulin G1 >pdb\|2DTS\|B Chain B, Crystal Structure Of The Defucosylated Fc Fragment From Human Immunoglobulin G1	23.1	211	2%	255	100%
3DO3_A	Chain A, Human 1gg1 Fc Fragment, 2.5 Angstrom Structure >pdb\|3DO3\|B Chain B, Human 1gg1 Fc Fragment, 2.5 Angstrom Structure	23.1	211	2%	257	100%
3DNK_A	Chain A, Enzyme Deglycosylated Human Igg1 Fc Fragment >pdb\|3DNK\|B Chain B, Enzyme Deglycosylated Human Igg1 Fc Fragment	23.1	209	2%	257	100%
1OQO_A	Chain A, Complex Between G0 Version Of An Fc Bound To A Minimized Version Of Protein A Called Mini-Z >pdb\|1OQO\|B Chain B, Complex Between G0 Version Of An Fc Bound To A Minimized Version Of Protein A Called Mini-Z >pdb\|1OQX\|A Chain A, G-2 Glycovariant Of Human Igg Fc Bound To Minimized Version Of Protein A Called Z34c >pdb\|1OQX\|B Chain B, G-2 Glycovariant Of Human Igg Fc Bound To Minimized Version Of Protein A Called Z34c	23.1	211	2%	257	100%
3D6G_A	Chain A, Fc Fragment Of Igg1 (Herceptin) With Protein-A Mimetic Peptide Dendrimer Ligand >pdb\|3D6G\|B Chain B, Fc Fragment Of Igg1 (Herceptin) With Protein-A Mimetic Peptide Dendrimer Ligand.	23.1	211	2%	257	100%
3FJT_A	Chain A, Crystal Structure Of A Human Fc Fragment Engineered For Extended Serum Half-Life >pdb\|3FJT\|B Chain B, Crystal Structure Of A Human Fc Fragment Engineered For Extended Serum Half-Life	23.1	211	2%	258	100%
2WAH_A	Chain A, Crystal Structure Of An Igg1 Fc Glycoform (Man9glcnac2) >pdb\|2WAH\|B Chain B, Crystal Structure Of An Igg1 Fc Glycoform (Man9glcnac2)	23.1	192	2%	258	100%
1L6X_A	Chain A, Fc Fragment Of Rituximab Bound To A Minimized Version Of The B-Domain From Protein A Called Z34c	23.1	211	2%	258	100%
1DN2_A	Chain A, Fc Fragment Of Human Igg1 In Complex With An Engineered 13 Residue Peptide Dcawhlgelvwct-Nh2 >pdb\|1DN2\|B Chain B, Fc Fragment Of Human Igg1 In Complex With An Engineered 13 Residue Peptide Dcawhlgelvwct-Nh2	23.1	211	2%	258	100%
NP_848696.1	minor histocompatibility antigen H13 isoform 3 [Homo sapiens]	22.3	612	10%	731	100%
NP_848695.1	minor histocompatibility antigen H13 isoform 2 [Homo sapiens]	21.4	574	10%	272	100%
NP_110416.1	minor histocompatibility antigen H13 isoform 1 [Homo sapiens]	22.3	563	10%	731	100%
AAY33429.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	23.1	151	2%	287	100%
ACN63282.1	B cell antibody heavy chain variable region [Homo sapiens]	23.5	220	3%	302	100%
ACN63252.1	B cell antibody heavy chain variable region [Homo sapiens]	23.5	125	1%	302	100%
ACN63249.1	B cell antibody heavy chain variable region [Homo sapiens]	23.5	125	1%	302	100%
ACN63245.1	B cell antibody heavy chain variable region [Homo sapiens]	23.5	125	1%	302	100%
3GSN_B	Chain B, Crystal Structure Of The Public Ra14 Tcr In Complex With The Hcmv Dominant NlvHLA-A2 Epitope	23.5	179	2%	302	100%
3EZR_A	Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site >pdb\|3EZV\|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site	23.5	399	5%	302	100%
3D5O_F	Chain F, Structural Recognition And Functional Activation Of Fcrr By Innate Pentraxins	23.5	241	2%	302	100%
CAR62778.1	immunoglobulin heavy chain variable region [Homo sapiens]	23.5	198	2%	302	100%
2RD7_A	Chain A, Human Complement Membrane Attack Proteins Share A Common Fold With Bacterial Cytolysins	23.5	371	5%	302	100%
NP_001129026.1	band 4.1-like protein 2 isoform b [Homo sapiens] >ref\|NP_001129027.1\| band 4.1-like protein 2 isoform b [Homo sapiens]	23.5	610	8%	302	100%
2R0L_A	Chain A, Short Form Hgfa With Inhibitory Fab75	23.5	233	2%	302	100%
2QQH_A	Chain A, Structure Of C8a-Macpf Reveals Mechanism Of Membrane Attack In Complement Immune Defense	23.5	340	6%	302	100%
2DHK_A	Chain A, Solution Structure Of The Ph Domain Of Tbc1 Domain Family Member 2 Protein From Human	23.5	93.1	2%	302	75%
AAY40743.1	SIGLEC-15 [Homo sapiens]	23.5	196	3%	302	83%
ABR91953.1	T-cell receptor beta chain [Homo sapiens]	23.5	41.6	0%	302	61%
ABR91957.1	T-cell receptor beta chain [Homo sapiens]	23.5	167	2%	302	100%
ABR37266.1	T-cell receptor beta chain [Homo sapiens]	23.5	56.6	0%	302	71%
ABR37239.1	T-cell receptor beta chain [Homo sapiens]	23.5	58.3	0%	302	80%
ABR37253.1	T-cell receptor beta chain [Homo sapiens]	23.5	57.5	0%	302	71%
NP_001177757.1	low affinity immunoglobulin gamma Fc region receptor II-b isoform 5 [Homo sapiens]	23.5	484	6%	302	100%
NP_001011552.2	sodium/hydrogen exchanger 4 [Homo sapiens]	23.5	1065	14%	302	100%
NP_963857.3	low affinity immunoglobulin gamma Fc region receptor II-c precursor [Homo sapiens]	23.5	429	6%	302	100%
EAW84063.1	similar to Complement C3 precursor, isoform CRA_a [Homo sapiens]	23.5	1364	18%	302	100%
EAW84064.1	similar to Complement C3 precursor, isoform CRA_b [Homo sapiens]	23.5	1577	21%	302	100%
NP_001123359.1	dnaJ homolog subfamily C member 2 isoform 2 [Homo sapiens]	23.5	438	5%	302	100%
Q9BPV8.2	RecName: Full=P2Y purinoceptor 13; Short=P2Y13; AltName: Full=G-protein coupled receptor 86; AltName: Full=G-protein coupled receptor 94	23.5	512	8%	302	100%
NP_001073279.1	beta-galactosidase isoform b [Homo sapiens]	23.5	553	7%	302	100%
P16885.4	RecName: Full=1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; AltName: Full=Phosphoinositide phospholipase C-gamma-2; AltName: Full=Phospholipase C-gamma-2; Short=PLC-gamma-2; AltName: Full=Phospholipase C-IV; Short=PLC-IV	23.5	1247	17%	302	100%
NP_002369.2	megakaryocyte-associated tyrosine-protein kinase isoform b [Homo sapiens]	23.5	533	7%	302	100%
ABG38423.1	immunglobulin heavy chain variable region [Homo sapiens]	23.5	166	2%	302	100%
AAV69612.1	immune receptor expressed on myeloid cells 3 [Homo sapiens]	23.5	108	1%	302	100%
NP_055192.1	dnaJ homolog subfamily C member 2 isoform 1 [Homo sapiens]	23.5	488	6%	302	100%
NP_008820.2	T-lymphocyte activation antigen CD86 isoform 2 precursor [Homo sapiens]	23.5	386	5%	302	100%
NP_787058.3	T-lymphocyte activation antigen CD86 isoform 1 [Homo sapiens]	23.5	401	5%	302	100%
Q6IN85.1	RecName: Full=Serine/threonine-protein phosphatase 4 regulatory subunit 3A; AltName: Full=SMEK homolog 1	23.5	997	13%	302	100%
NP_937839.1	T-cell surface protein tactile isoform 1 precursor [Homo sapiens] >sp\|P40200.2\|TACT_HUMAN RecName: Full=T-cell surface protein tactile; AltName: Full=T cell-activated increased late expression protein; AltName: Full=Cell surface antigen CD96; AltName: CD_antigen=CD96; Flags: Precursor	23.5	572	8%	302	100%
NP_003831.2	tumor necrosis factor receptor superfamily member 10D precursor [Homo sapiens]	23.5	492	7%	302	100%
NP_067674.2	low affinity immunoglobulin gamma Fc region receptor II-a isoform 2 [Homo sapiens]	23.5	454	6%	302	100%
NP_000005.2	alpha-2-macroglobulin precursor [Homo sapiens]	23.5	1287	16%	302	100%
NP_001138883.1	coiled-coil domain-containing protein 110 isoform b [Homo sapiens]	23.5	1138	15%	302	100%
NP_001129691.1	low affinity immunoglobulin gamma Fc region receptor II-a isoform 1 [Homo sapiens]	23.5	439	6%	302	100%
NP_116179.2	calcium release-activated calcium channel protein 1 [Homo sapiens] >sp\|Q96D31.2\|CRCM1_HUMAN RecName: Full=Calcium release-activated calcium channel protein 1; AltName: Full=Protein orai-1; AltName: Full=Transmembrane protein 142A	23.5	443	6%	302	87%
NP_055390.1	schwannomin-interacting protein 1 [Homo sapiens]	23.5	438	7%	302	100%
AAA36069.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	23.5	247	3%	302	83%
NP_001002273.1	low affinity immunoglobulin gamma Fc region receptor II-b isoform 2 precursor [Homo sapiens]	23.5	484	6%	302	100%
NP_001002275.1	low affinity immunoglobulin gamma Fc region receptor II-b isoform 4 precursor [Homo sapiens]	23.5	500	6%	302	100%
NP_001159817.1	myoD family inhibitor domain-containing protein isoform p32 [Homo sapiens]	23.5	214	2%	302	100%
NP_951038.1	myoD family inhibitor domain-containing protein isoform p40 [Homo sapiens]	23.5	372	4%	302	100%
1YPO_A	Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|C Chain C, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|D Chain D, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|E Chain E, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|F Chain F, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|G Chain G, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group >pdb\|1YPO\|H Chain H, Human Oxidized Low Density Lipoprotein Receptor Lox-1 P3 1 21 Space Group	23.5	178	2%	302	100%
1YPQ_A	Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 Dioxane Complex >pdb\|1YPQ\|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 Dioxane Complex >pdb\|1YPU\|A Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 C2 Space Group >pdb\|1YPU\|B Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 C2 Space Group	23.5	178	2%	302	100%
2R0K_A	Chain A, Protease Domain Of Hgfa With Inhibitor Fab58	23.5	233	2%	302	100%
1UJ3_C	Chain C, Crystal Structure Of A Humanized Fab Fragment Of Anti- Tissue-Factor Antibody In Complex With Tissue Factor	23.5	176	2%	302	100%
NP_112192.2	protein unc-93 homolog B1 [Homo sapiens]	23.5	718	9%	302	100%
1PN5_A	Chain A, Nmr Structure Of The Nalp1 Pyrin Domain (Pyd)	23.5	58.8	1%	302	80%
1OQE_K	Chain K, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|L Chain L, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|M Chain M, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|N Chain N, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|O Chain O, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|P Chain P, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|Q Chain Q, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|R Chain R, Crystal Structure Of Stall-1 With Baff-R	23.5	23.5	0%	302	100%
1OSX_A	Chain A, Solution Structure Of The Extracellular Domain Of Blys Receptor 3 (Br3)	23.5	113	1%	302	100%
NP_075052.1	leucine-rich repeat-containing protein 19 precursor [Homo sapiens]	23.5	500	8%	302	100%
NP_005807.1	T-cell surface protein tactile isoform 2 precursor [Homo sapiens]	23.5	554	8%	302	100%
1FYT_E	Chain E, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr1	23.5	234	3%	302	100%
P31995.1	RecName: Full=Low affinity immunoglobulin gamma Fc region receptor II-c; Short=IgG Fc receptor II-c; AltName: Full=Fc-gamma RII-c; Short=Fc-gamma-RIIc; Short=FcRII-c; AltName: Full=CDw32; AltName: CD_antigen=CD32; Flags: Precursor	23.5	429	6%	302	100%
NP_000897.3	atrial natriuretic peptide receptor 1 precursor [Homo sapiens]	23.5	1010	14%	302	100%
NP_647611.1	megakaryocyte-associated tyrosine-protein kinase isoform c [Homo sapiens]	23.5	427	5%	302	100%
CAD32734.1	immunoglobulin heavy chain variable region [Homo sapiens]	23.5	160	2%	302	100%
CAB51710.1	immunoglobulin heavy chain variable region [Homo sapiens]	23.5	153	2%	302	83%
O75015.2	RecName: Full=Low affinity immunoglobulin gamma Fc region receptor III-B; AltName: Full=IgG Fc receptor III-1; AltName: Full=Fc-gamma RIII-beta; Short=Fc-gamma RIIIb; Short=Fc-gamma RIII; Short=FcRIIIb; Short=FcRIII; AltName: Full=FcR-10; AltName: CD_antigen=CD16b; Flags: Precursor	23.5	291	4%	302	83%
1E4J_A	Chain A, Crystal Structure Of The Soluble Human Fc-Gamma Receptor Iii	23.5	163	2%	302	83%
NP_001002274.1	low affinity immunoglobulin gamma Fc region receptor II-b isoform 3 precursor [Homo sapiens]	23.5	484	6%	302	100%
NP_116126.2	lamin-B2 [Homo sapiens]	23.5	517	7%	302	100%
JC7604	CD86 spliced variant CD86 deltaTM isoform - human	23.5	318	4%	302	100%
NP_003725.1	membrane primary amine oxidase precursor [Homo sapiens]	23.5	653	9%	302	83%
NP_068769.2	B-lymphocyte antigen CD20 [Homo sapiens] >ref\|NP_690605.1\| B-lymphocyte antigen CD20 [Homo sapiens]	23.5	459	6%	302	100%
NP_001422.1	band 4.1-like protein 2 isoform a [Homo sapiens]	23.5	1082	15%	302	100%
Q8TEW6.2	RecName: Full=Docking protein 4; AltName: Full=Downstream of tyrosine kinase 4; AltName: Full=Insulin receptor substrate 5; Short=IRS-5; Short=IRS5	23.5	277	3%	302	100%
CAC28886.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	23.5	181	2%	302	100%
P13726.1	RecName: Full=Tissue factor; Short=TF; AltName: Full=Coagulation factor III; AltName: Full=Thromboplastin; AltName: CD_antigen=CD142; Flags: Precursor	23.5	279	3%	302	100%
NP_055256.1	sialic acid-binding Ig-like lectin 9 precursor [Homo sapiens]	23.5	429	6%	302	100%
1T83_C	Chain C, Crystal Structure Of A Human Type Iii Fc Gamma Receptor In Complex With An Fc Fragment Of Igg1 (Orthorhombic) >pdb\|1T89\|C Chain C, Crystal Structure Of A Human Type Iii Fc Gamma Receptor In Complex With An Fc Fragment Of Igg1 (Hexagonal)	23.5	163	2%	302	83%
NP_056009.1	myosin-Id [Homo sapiens]	23.5	910	12%	302	100%
NP_000868.1	interleukin-1 receptor type 1 precursor [Homo sapiens]	23.5	532	6%	302	100%
NP_001832.1	cannabinoid receptor 2 [Homo sapiens] >sp\|P34972.1\|CNR2_HUMAN RecName: Full=Cannabinoid receptor 2; Short=CB-2; Short=hCB2; Short=CB2; AltName: Full=CX5	23.5	452	6%	302	100%
1FCG_A	Chain A, Ectodomain Of Human Fc Gamma Receptor, Fcgriia	23.5	258	3%	302	100%
1FNL_A	Chain A, Crystal Structure Of The Extracellular Domain Of A Human Fcgriii	23.5	166	2%	302	83%
NP_689988.1	coiled-coil domain-containing protein 110 isoform a [Homo sapiens] >sp\|Q8TBZ0.1\|CC110_HUMAN RecName: Full=Coiled-coil domain-containing protein 110; AltName: Full=Cancer/testis antigen KM-HN-1; AltName: Full=Cancer/testis antigen 52; Short=CT52	23.5	1171	15%	302	100%
CAC03838.1	T-cell receptor beta chain [Homo sapiens]	23.5	88.5	1%	302	87%
P06241.3	RecName: Full=Tyrosine-protein kinase Fyn; AltName: Full=Proto-oncogene c-Fyn; AltName: Full=p59-Fyn; AltName: Full=Proto-oncogene Syn; AltName: Full=SLK	23.5	542	6%	302	100%
1I85_A	Chain A, Crystal Structure Of The Ctla-4B7-2 Complex >pdb\|1I85\|B Chain B, Crystal Structure Of The Ctla-4B7-2 Complex >pdb\|1NCN\|A Chain A, The Receptor-Binding Domain Of Human B7-2 >pdb\|1NCN\|B Chain B, The Receptor-Binding Domain Of Human B7-2	23.5	94.0	1%	302	100%
NP_057274.1	cornulin [Homo sapiens]	23.5	203	3%	302	100%
2FCB_A	Chain A, Human Fc Gamma Receptor Iib Ectodomain (Cd32)	23.5	208	2%	302	80%
NP_002899.1	proto-oncogene c-Rel [Homo sapiens]	23.5	533	7%	302	100%
CAC28884.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	23.5	197	3%	302	100%
Q9NQC7.1	RecName: Full=Ubiquitin carboxyl-terminal hydrolase CYLD; AltName: Full=Ubiquitin thiolesterase CYLD; AltName: Full=Ubiquitin-specific-processing protease CYLD; AltName: Full=Deubiquitinating enzyme CYLD	23.5	1060	15%	302	100%
NP_003992.3	low affinity immunoglobulin gamma Fc region receptor II-b isoform 1 precursor [Homo sapiens] >sp\|P31994.2\|FCG2B_HUMAN RecName: Full=Low affinity immunoglobulin gamma Fc region receptor II-b; Short=IgG Fc receptor II-b; AltName: Full=Fc-gamma RII-b; Short=Fc-gamma-RIIb; Short=FcRII-b; AltName: Full=CDw32; AltName: CD_antigen=CD32; Flags: Precursor	23.5	500	6%	302	100%
NP_689518.1	KTEL motif-containing protein 1 precursor [Homo sapiens]	23.5	559	7%	302	100%
1JPS_T	Chain T, Crystal Structure Of Tissue Factor In Complex With Humanized Fab D3h44	23.5	176	2%	302	100%
NP_001562.1	interferon regulatory factor 3 [Homo sapiens]	23.5	307	4%	302	100%
NP_647612.1	megakaryocyte-associated tyrosine-protein kinase isoform a [Homo sapiens]	23.5	500	7%	302	100%
CAC28888.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	23.5	197	3%	302	100%
3F5X_A	Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its Active Site >pdb\|3F5X\|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its Active Site	23.5	399	5%	302	100%
P07357.2	RecName: Full=Complement component C8 alpha chain; AltName: Full=Complement component 8 subunit alpha; Flags: Precursor	23.5	529	8%	302	100%
1H9V_A	Chain A, Human Fc-Gamma-Receptor Iia (Fcgriia), Monoclinic	23.5	241	2%	302	100%
NP_004146.1	serpin B9 [Homo sapiens]	23.5	343	4%	302	100%
NP_000869.1	interleukin-2 receptor subunit beta precursor [Homo sapiens]	23.5	635	8%	302	85%
P40238.1	RecName: Full=Thrombopoietin receptor; Short=TPO-R; AltName: Full=Myeloproliferative leukemia protein; AltName: Full=Proto-oncogene c-Mpl; AltName: CD_antigen=CD110; Flags: Precursor	23.5	894	12%	302	100%
NP_057371.2	heterochromatin protein 1-binding protein 3 [Homo sapiens]	23.5	426	7%	302	83%
1J8H_E	Chain E, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr4	23.5	234	3%	302	100%
NP_002407.1	C-X-C motif chemokine 9 precursor [Homo sapiens] >sp\|Q07325.1\|CXCL9_HUMAN RecName: Full=C-X-C motif chemokine 9; AltName: Full=Small-inducible cytokine B9; AltName: Full=Gamma-interferon-induced monokine; AltName: Full=MIG; Flags: Precursor	23.5	137	2%	302	100%
1OGA_E	Chain E, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition	22.7	188	3%	320	100%
2VLJ_E	Chain E, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLK\|E Chain E, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLM\|E Chain E, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain	22.7	188	3%	322	100%
P10643.2	RecName: Full=Complement component C7; Flags: Precursor	21.8	775	9%	981	100%
3L5W_L	Chain L, Crystal Structure Of The Complex Between Il-13 And C836 Fab >pdb\|3L5W\|A Chain A, Crystal Structure Of The Complex Between Il-13 And C836 Fab	21.4	256	3%	329	100%
NP_848697.1	minor histocompatibility antigen H13 isoform 4 [Homo sapiens]	21.4	318	6%	342	100%
AAC43026.1	anti-mucin1 light chain variable region [Homo sapiens]	22.7	76.8	1%	372	100%
AAY33375.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	22.7	96.5	1%	372	100%
CAB59387.1	T cell receptor beta chain variable region [Homo sapiens]	22.7	121	2%	545	100%
NP_000619.3	interleukin-10 receptor subunit beta precursor [Homo sapiens]	23.1	327	5%	406	100%
NP_604393.2	NACHT, LRR and PYD domains-containing protein 4 [Homo sapiens]	22.7	1182	16%	545	100%
3KGR_A	Chain A, Crystal Structure Of The Human Leukocyte-Associated Ig-Like Receptor-1 (Lair-1) >pdb\|3KGR\|B Chain B, Crystal Structure Of The Human Leukocyte-Associated Ig-Like Receptor-1 (Lair-1) >pdb\|3KGR\|C Chain C, Crystal Structure Of The Human Leukocyte-Associated Ig-Like Receptor-1 (Lair-1)	23.1	121	1%	406	80%
3HUP_A	Chain A, High-Resolution Structure Of The Extracellular Domain Of Human Cd69 >pdb\|3HUP\|B Chain B, High-Resolution Structure Of The Extracellular Domain Of Human Cd69	23.1	89.7	0%	406	83%
3D18_A	Chain A, Crystal Structure Of Hla-B2709 Complexed With A Variant Of The Latent Membrane Protein 2 Peptide (Lmp2(L)) Of Epstein- Barr Virus	23.1	128	1%	406	100%
3EO9_L	Chain L, Crystal Structure The Fab Fragment Of Efalizumab >pdb\|3EOA\|L Chain L, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form I >pdb\|3EOA\|A Chain A, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form I >pdb\|3EOB\|L Chain L, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form Ii >pdb\|3EOB\|A Chain A, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form Ii	23.1	209	2%	406	100%
3FXI_A	Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex >pdb\|3FXI\|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps Ra Complex	23.1	617	9%	406	100%
3FKU_X	Chain X, Crystal Structure Of Influenza Hemagglutinin (H5) In Complex With A Broadly Neutralizing Antibody F10 >pdb\|3FKU\|Y Chain Y, Crystal Structure Of Influenza Hemagglutinin (H5) In Complex With A Broadly Neutralizing Antibody F10 >pdb\|3FKU\|Z Chain Z, Crystal Structure Of Influenza Hemagglutinin (H5) In Complex With A Broadly Neutralizing Antibody F10 >pdb\|3FKU\|S Chain S, Crystal Structure Of Influenza Hemagglutinin (H5) In Complex With A Broadly Neutralizing Antibody F10 >pdb\|3FKU\|T Chain T, Crystal Structure Of Influenza Hemagglutinin (H5) In Complex With A Broadly Neutralizing Antibody F10 >pdb\|3FKU\|U Chain U, Crystal Structure Of Influenza Hemagglutinin (H5) In Complex With A Broadly Neutralizing Antibody F10	23.1	236	4%	406	100%
3F8U_A	Chain A, TapasinERP57 HETERODIMER >pdb\|3F8U\|C Chain C, TapasinERP57 HETERODIMER	23.1	340	4%	406	100%
NP_001135995.1	interleukin-1 receptor-associated kinase 3 isoform b [Homo sapiens]	23.1	553	6%	406	100%
NP_009130.2	interleukin-1 receptor-associated kinase 3 isoform a [Homo sapiens]	23.1	611	7%	406	100%
CAR63033.1	immunoglobulin heavy chain variable region [Homo sapiens]	23.1	103	1%	406	100%
3DIF_B	Chain B, Crystal Structure Of Fabox117 >pdb\|3DIF\|D Chain D, Crystal Structure Of Fabox117	23.1	232	4%	406	80%
ACA28838.1	truncated T cell receptor variable alpha 2 chain [Homo sapiens]	23.1	180	2%	406	100%
ABR37263.1	T-cell receptor beta chain [Homo sapiens]	23.1	39.5	0%	406	71%
2D7T_L	Chain L, Crystal Structure Of Human Anti Polyhydroxybutyrate Antibody Fv	23.1	88.9	1%	406	100%
NP_690880.1	EGF-like module-containing mucin-like hormone receptor-like 2 isoform b [Homo sapiens]	23.1	757	9%	406	100%
NP_690883.1	EGF-like module-containing mucin-like hormone receptor-like 2 isoform e [Homo sapiens]	23.1	809	10%	406	100%
NP_690881.1	EGF-like module-containing mucin-like hormone receptor-like 2 isoform c [Homo sapiens]	23.1	757	9%	406	100%
NP_690885.1	EGF-like module-containing mucin-like hormone receptor-like 2 isoform g [Homo sapiens]	23.1	757	9%	406	100%
NP_690882.1	EGF-like module-containing mucin-like hormone receptor-like 2 isoform d [Homo sapiens]	23.1	709	9%	406	100%
NP_690884.1	EGF-like module-containing mucin-like hormone receptor-like 2 isoform f [Homo sapiens]	23.1	757	9%	406	100%
Q86WV1.3	RecName: Full=Src kinase-associated phosphoprotein 1; AltName: Full=Src family-associated phosphoprotein 1; AltName: Full=Src kinase-associated phosphoprotein of 55 kDa; Short=SKAP-55; Short=pp55	23.1	208	2%	406	100%
NP_612154.2	mucin-4 isoform e [Homo sapiens]	23.1	1351	18%	406	100%
NP_004523.3	mucin-4 isoform d [Homo sapiens]	23.1	1393	19%	406	100%
NP_038475.2	EGF-like module-containing mucin-like hormone receptor-like 2 isoform a [Homo sapiens]	23.1	809	10%	406	100%
P19801.4	RecName: Full=Amiloride-sensitive amine oxidase [copper-containing]; Short=Diamine oxidase; Short=DAO; AltName: Full=Amiloride-binding protein; Short=ABP; AltName: Full=Histaminase; AltName: Full=Kidney amine oxidase; Short=KAO; Flags: Precursor	23.1	824	9%	406	100%
NP_001129316.1	signal-regulatory protein beta-1 isoform 3 precursor [Homo sapiens]	23.1	456	6%	406	100%
NP_996554.1	osteoclast-associated immunoglobulin-like receptor isoform 1 [Homo sapiens]	23.1	233	5%	406	100%
NP_789790.2	NACHT, LRR and PYD domains-containing protein 9 [Homo sapiens]	23.1	1062	15%	406	100%
NP_922939.1	C-type lectin domain family 7 member A isoform c [Homo sapiens]	23.1	336	5%	406	83%
Q9NP31.3	RecName: Full=SH2 domain-containing protein 2A; AltName: Full=T cell-specific adapter protein; Short=TSAd; AltName: Full=VEGF receptor-associated protein; AltName: Full=SH2 domain-containing adapter protein	23.1	361	4%	406	100%
NP_922940.1	C-type lectin domain family 7 member A isoform d [Homo sapiens]	23.1	270	4%	406	83%
NP_150594.2	tripartite motif-containing protein 3 [Homo sapiens] >ref\|NP_006449.2\| tripartite motif-containing protein 3 [Homo sapiens]	23.1	698	10%	406	100%
NP_062556.2	RNA binding motif protein, X-linked-like 1 [Homo sapiens] >ref\|NP_001156008.1\| RNA binding motif protein, X-linked-like 1 [Homo sapiens]	23.1	347	4%	406	87%
NP_647538.1	attractin isoform 2 [Homo sapiens]	23.1	1068	14%	406	100%
Q8NFZ5.1	RecName: Full=TNFAIP3-interacting protein 2; AltName: Full=Fetal liver LKB1-interacting protein; AltName: Full=A20-binding inhibitor of NF-kappa-B activation 2; Short=ABIN-2	23.1	519	7%	406	100%
NP_060213.2	dipeptidyl peptidase 8 isoform 2 [Homo sapiens]	23.1	919	15%	406	100%
NP_003153.2	striatin [Homo sapiens]	23.1	783	11%	406	100%
AAH00641.2	MYBBP1A protein [Homo sapiens]	23.1	790	10%	406	100%
AAC98380.1	complement protein C4B frameshift mutant [Homo sapiens]	23.1	411	5%	406	100%
NP_037434.1	eukaryotic elongation factor 2 kinase [Homo sapiens]	23.1	660	9%	406	100%
NP_001138620.1	corticotropin-releasing factor receptor 1 isoform 4 [Homo sapiens]	23.1	462	6%	406	83%
NP_068352.1	leukocyte-associated immunoglobulin-like receptor 1 isoform b precursor [Homo sapiens]	23.1	361	5%	406	100%
AAA36075.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	23.1	159	2%	406	83%
NP_055694.3	P2Y purinoceptor 14 [Homo sapiens] >ref\|NP_001074924.1\| P2Y purinoceptor 14 [Homo sapiens]	23.1	477	7%	406	85%
AAC23982.1	Jak2 kinase [Homo sapiens]	23.1	879	12%	406	100%
AAK29630.1	chemokine receptor CXCR4 [Homo sapiens]	23.1	393	5%	406	100%
AAZ32314.1	immunoglobulin kappa light chain [Homo sapiens]	23.1	111	1%	406	100%
AAY33464.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	23.1	121	1%	406	100%
AAY33449.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	23.1	72.5	1%	406	100%
AAY33461.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	23.1	75.5	1%	406	100%
AAY33352.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	23.1	60.5	1%	406	100%
AAY33339.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	23.1	58.8	0%	406	100%
AAS59837.1	T-cell immune regulator 1 transcript variant 7 [Homo sapiens]	23.1	114	1%	406	100%
NP_932065.1	dipeptidyl peptidase 8 isoform 4 [Homo sapiens]	23.1	936	15%	406	100%
NP_620385.1	cell surface glycoprotein CD200 receptor 1 isoform b [Homo sapiens]	23.1	302	5%	406	83%
NP_411241.1	cyclin-D1-binding protein 1 isoform 2 [Homo sapiens]	23.1	239	3%	406	100%
NP_057595.2	C-type lectin domain family 1 member A [Homo sapiens]	23.1	229	3%	406	100%
NP_922945.1	C-type lectin domain family 7 member A isoform f [Homo sapiens]	23.1	175	2%	406	83%
NP_001136122.1	heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo sapiens]	23.1	503	6%	406	100%
NP_006044.1	V-type proton ATPase 116 kDa subunit a isoform 3 isoform b [Homo sapiens] >gb\|AAC35742.1\| TIRC7 [Homo sapiens] >gb\|EAW74689.1\| T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, isoform CRA_a [Homo sapiens]	23.1	808	11%	406	100%
NP_573399.1	osteoclast-associated immunoglobulin-like receptor isoform 4 [Homo sapiens]	23.1	228	4%	406	100%
NP_570127.2	osteoclast-associated immunoglobulin-like receptor isoform 3 [Homo sapiens]	23.1	249	5%	406	100%
NP_573398.1	osteoclast-associated immunoglobulin-like receptor isoform 5 [Homo sapiens]	23.1	228	4%	406	100%
NP_569118.1	dipeptidyl peptidase 8 isoform 1 [Homo sapiens]	23.1	971	15%	406	100%
NP_620161.1	cell surface glycoprotein CD200 receptor 1 isoform a [Homo sapiens]	23.1	545	8%	406	100%
BAE48231.1	regulatory factor X4, isoform c [Homo sapiens]	23.1	887	11%	406	100%
1ZA6_A	Chain A, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody >pdb\|1ZA6\|C Chain C, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody >pdb\|1ZA6\|E Chain E, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody >pdb\|1ZA6\|G Chain G, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized Antibody	23.1	211	3%	406	100%
2BSR_A	Chain A, Crystal Structures And Kir3dl1 Recognition Of Three Immunodominant Viral Peptides Complexed To Hla-B2705 >pdb\|2BSS\|A Chain A, Crystal Structures And Kir3dl1 Recognition Of Three Immunodominant Viral Peptides Complexed To Hla-B2705	23.1	128	1%	406	100%
1SYV_A	Chain A, Hla-B4405 Complexed To The Dominant Self Ligand Eefgraygf >pdb\|3DX8\|A Chain A, Crystal Structure Of B4405 Presenting A 10mer Ebv Epitope >pdb\|3DXA\|A Chain A, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|F Chain F, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|K Chain K, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3KPP\|A Chain A, Crystal Structure Of Hla B4405 In Complex With Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3KPR\|A Chain A, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPR\|F Chain F, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPS\|A Chain A, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylqafty A Self Peptide From The Abcd3 Protein	23.1	148	1%	406	83%
1R70_B	Chain B, Model Of Human Iga2 Determined By Solution Scattering, Curve Fitting And Homology Modelling >pdb\|1R70\|D Chain D, Model Of Human Iga2 Determined By Solution Scattering, Curve Fitting And Homology Modelling >pdb\|3CM9\|A Chain A, Solution Structure Of Human Siga2 >pdb\|3CM9\|B Chain B, Solution Structure Of Human Siga2 >pdb\|3CM9\|C Chain C, Solution Structure Of Human Siga2 >pdb\|3CM9\|D Chain D, Solution Structure Of Human Siga2	23.1	508	6%	406	100%
CAG29712.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62725.1\| immunoglobulin heavy chain variable region [Homo sapiens]	23.1	95.7	1%	406	85%
1N2R_A	Chain A, A Natural Selected Dimorphism In Hla B44 Alters Self, Peptide Reportoire And T Cell Recognition >pdb\|1SYS\|A Chain A, Crystal Structure Of Hla, B4403, And Peptide Eeptvikky >pdb\|3DX7\|A Chain A, Crystal Structure Of Hla-B4403 Presenting 10mer Ebv Antigen >pdb\|3KPN\|A Chain A, Crystal Structure Of Hla B4403 In Complex With Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3KPO\|A Chain A, Crystal Structure Of Hla B4403 In Complex With Eeylkawtf, A Mimotope	23.1	148	1%	406	83%
2ZKH_H	Chain H, Human Thrombopoietin Neutralizing Antibody Tn1 Fab	23.1	249	3%	406	100%
3HXO_A	Chain A, Crystal Structure Of Von Willebrand Factor (Vwf) A1 Domain In Complex With Dna Aptamer Arc1172, An Inhibitor Of Vwf- Platelet Binding >pdb\|3HXQ\|A Chain A, Crystal Structure Of Von Willebrand Factor (Vwf) A1 Domain In Complex With Dna Aptamer Arc1172, An Inhibitor Of Vwf- Platelet Binding	23.1	195	2%	406	83%
1M6O_A	Chain A, Crystal Structure Of Hla B4402 In Complex With Hla Dpa0201 Peptide >pdb\|3DX6\|A Chain A, Crystal Structure Of B4402 Presenting A 10mer Ebv Epitope >pdb\|3KPL\|A Chain A, Crystal Structure Of Hla B4402 In Complex With Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3KPM\|A Chain A, Crystal Structure Of Hla B4402 In Complex With Eeylkawtf, A Mimotope >pdb\|3L3D\|A Chain A, Crystal Structure Of Hla-B4402 In Complex With The F3a Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3G\|A Chain A, Crystal Structure Of Hla-B4402 In Complex With The R5a Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3I\|A Chain A, Crystal Structure Of Hla-B4402 In Complex With The F7a Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3J\|A Chain A, Crystal Structure Of Hla-B4402 In Complex With The F3aR5A Double Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3K\|A Chain A, Crystal Structure Of Hla-B4402 In Complex With The R5aF7A Double Mutant Of A Self-Peptide Derived From Dpa0201	23.1	148	1%	406	83%
NP_932064.1	dipeptidyl peptidase 8 isoform 3 [Homo sapiens] >sp\|Q6V1X1.1\|DPP8_HUMAN RecName: Full=Dipeptidyl peptidase 8; Short=DP8; AltName: Full=Dipeptidyl peptidase VIII; Short=DPP VIII; AltName: Full=Prolyl dipeptidase DPP8; AltName: Full=Dipeptidyl peptidase IV-related protein 1; Short=DPRP-1	23.1	971	15%	406	100%
1HKF_A	Chain A, The Three Dimensional Structure Of Nk Cell Receptor Nkp44, A Triggering Partner In Natural Cytotoxicity	23.1	130	2%	406	83%
NP_998774.2	family with sequence similarity 19 (chemokine (C-C motif)-like), member A1 precursor [Homo sapiens]	23.1	57.5	1%	406	83%
NP_775829.2	FYVE, RhoGEF and PH domain-containing protein 2 [Homo sapiens]	23.1	698	10%	406	100%
NP_003317.1	tumor necrosis factor ligand superfamily member 4 [Homo sapiens]	23.1	288	3%	406	100%
NP_003584.2	forkhead box protein N1 [Homo sapiens]	23.1	827	13%	406	100%
P30481.1	RecName: Full=HLA class I histocompatibility antigen, B-44 alpha chain; AltName: Full=MHC class I antigen B*44; AltName: Full=Bw-44; Flags: Precursor	23.1	262	3%	406	100%
P03989.2	RecName: Full=HLA class I histocompatibility antigen, B-27 alpha chain; AltName: Full=MHC class I antigen B*27; Flags: Precursor	23.1	227	2%	406	100%
NP_789792.1	NACHT, LRR and PYD domains-containing protein 14 [Homo sapiens]	23.1	1164	14%	406	100%
P20273.2	RecName: Full=B-cell receptor CD22; AltName: Full=Sialic acid-binding Ig-like lectin 2; Short=Siglec-2; AltName: Full=T-cell surface antigen Leu-14; AltName: Full=B-lymphocyte cell adhesion molecule; Short=BL-CAM; AltName: CD_antigen=CD22; Flags: Precursor	23.1	939	12%	406	100%
NP_922938.1	C-type lectin domain family 7 member A isoform a [Homo sapiens]	23.1	439	7%	406	100%
NP_003845.2	interleukin-1 receptor-like 2 precursor [Homo sapiens]	23.1	522	7%	406	100%
NP_055071.2	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Homo sapiens]	23.1	637	8%	406	100%
NP_067009.1	zona pellucida sperm-binding protein 4 preproprotein [Homo sapiens]	23.1	450	6%	406	100%
1I8L_A	Chain A, Human B7-1CTLA-4 Co-Stimulatory Complex >pdb\|1I8L\|B Chain B, Human B7-1CTLA-4 Co-Stimulatory Complex	23.1	161	1%	406	100%
NP_001552.2	tumor necrosis factor receptor superfamily member 9 precursor [Homo sapiens]	23.1	444	6%	406	100%
NP_002278.1	leukocyte-associated immunoglobulin-like receptor 1 isoform a precursor [Homo sapiens]	23.1	396	6%	406	100%
CAD32736.1	immunoglobulin heavy chain variable region [Homo sapiens]	23.1	113	2%	406	85%
P30488.1	RecName: Full=HLA class I histocompatibility antigen, B-50 alpha chain; AltName: Full=MHC class I antigen B*50; AltName: Full=Bw-50; AltName: Full=HLA class I histocompatibility antigen, B-21 alpha chain; Flags: Precursor	23.1	264	3%	406	100%
NP_006842.2	glioma pathogenesis-related protein 1 precursor [Homo sapiens] >sp\|P48060.3\|GLIP1_HUMAN RecName: Full=Glioma pathogenesis-related protein 1; Short=GliPR 1; AltName: Full=Protein RTVP-1; Flags: Precursor	23.1	279	4%	406	100%
NP_612403.2	heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo sapiens] >sp\|Q8WVV9.1\|HNRLL_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like; Short=hnRNPLL; AltName: Full=Stromal RNA-regulating factor	23.1	503	6%	406	100%
CAB51727.1	immunoglobulin heavy chain variable region [Homo sapiens]	23.1	71.3	1%	406	80%
O00206.2	RecName: Full=Toll-like receptor 4; AltName: Full=hToll; AltName: CD_antigen=CD284; Flags: Precursor	23.1	784	11%	406	100%
Q99436.1	RecName: Full=Proteasome subunit beta type-7; AltName: Full=Proteasome subunit Z; AltName: Full=Macropain chain Z; AltName: Full=Multicatalytic endopeptidase complex chain Z; Flags: Precursor	23.1	242	4%	406	100%
P30487.2	RecName: Full=HLA class I histocompatibility antigen, B-49 alpha chain; AltName: Full=MHC class I antigen B*49; AltName: Full=HLA class I histocompatibility antigen, B-21 alpha chain; Flags: Precursor	23.1	215	2%	406	83%
NP_003255.2	toll-like receptor 2 precursor [Homo sapiens] >sp\|O60603.1\|TLR2_HUMAN RecName: Full=Toll-like receptor 2; AltName: Full=Toll/interleukin-1 receptor-like protein 4; AltName: CD_antigen=CD282; Flags: Precursor	23.1	981	13%	406	100%
NP_036274.3	cyclin-D1-binding protein 1 isoform 1 [Homo sapiens]	23.1	407	6%	406	100%
NP_005337.2	heat shock 70 kDa protein 1A/1B [Homo sapiens]	23.1	506	7%	406	100%
NP_003132.2	52 kDa Ro protein [Homo sapiens]	23.1	566	7%	406	100%
1FM5_A	Chain A, Crystal Structure Of Human Cd69	23.1	195	2%	406	100%
3FCT_A	Chain A, Mature Metal Chelatase Catalytic Antibody With Hapten >pdb\|3FCT\|C Chain C, Mature Metal Chelatase Catalytic Antibody With Hapten >pdb\|1NGW\|L Chain L, Chimeric Affinity Matured Fab 7g12 Complexed With Mesoporphyrin >pdb\|1NGW\|A Chain A, Chimeric Affinity Matured Fab 7g12 Complexed With Mesoporphyrin	23.1	262	3%	406	100%
P41279.2	RecName: Full=Mitogen-activated protein kinase kinase kinase 8; AltName: Full=Serine/threonine-protein kinase cot; AltName: Full=Proto-oncogene c-Cot; AltName: Full=Cancer Osaka thyroid oncogene; AltName: Full=Tumor progression locus 2; Short=TPL-2	23.1	476	7%	406	100%
P30479.1	RecName: Full=HLA class I histocompatibility antigen, B-41 alpha chain; AltName: Full=MHC class I antigen B*41; AltName: Full=Bw-41; Flags: Precursor	23.1	298	4%	406	100%
NP_002146.2	heat shock 70 kDa protein 6 [Homo sapiens]	23.1	520	6%	406	100%
NP_005182.1	T-lymphocyte activation antigen CD80 precursor [Homo sapiens]	23.1	285	3%	406	100%
1K5N_A	Chain A, Hla-B2709 Bound To Nona-Peptide M9 >pdb\|1JGD\|A Chain A, Hla-B2709 Bound To Deca-Peptide S10r >pdb\|1OF2\|A Chain A, Crystal Structure Of Hla-B2709 Complexed With The Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|1W0W\|A Chain A, Crystal Structure Of Hla-B2709 Complexed With The Self- Peptide Tis From Egf-Response Factor 1 >pdb\|3B3I\|A Chain A, Citrullination-Dependent Differential Presentation Of A Self-Peptide By Hla-B27 Subtypes >pdb\|3BP7\|A Chain A, The High Resolution Crystal Structure Of Hla-B2709 In Complex With A Cathepsin A Signal Sequence Peptide, Pcata >pdb\|3CZF\|A Chain A, Crystal Structure Of Hla-B2709 Complexed With The Glucagon Receptor (Gr) Peptide (Residues 412-420) >pdb\|3HCV\|A Chain A, Crystal Structure Of Hla-B2709 Complexed With The Double Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408)	23.1	128	1%	406	100%
NP_004480.1	G protein pathway suppressor 2 [Homo sapiens]	23.1	339	4%	406	100%
P30483.1	RecName: Full=HLA class I histocompatibility antigen, B-45 alpha chain; AltName: Full=MHC class I antigen B*45; AltName: Full=Bw-45; Flags: Precursor	23.1	264	3%	406	100%
NP_002911.2	transcription factor RFX4 isoform b [Homo sapiens]	23.1	677	9%	406	100%
NP_742150.1	interleukin-28A precursor [Homo sapiens]	23.1	130	2%	406	100%
NP_258428.2	membrane metallo-endopeptidase-like 1 [Homo sapiens]	23.1	688	10%	406	100%
NP_036288.2	band 4.1-like protein 1 isoform a [Homo sapiens]	23.1	747	11%	406	100%
O60674.2	RecName: Full=Tyrosine-protein kinase JAK2; AltName: Full=Janus kinase 2; Short=JAK-2	23.1	877	12%	406	100%
NP_003812.1	receptor-interacting serine/threonine-protein kinase 2 [Homo sapiens]	23.1	448	7%	406	100%
1HSA_A	Chain A, The Three-Dimensional Structure Of Hla-B27 At 2.1 Angstroms Resolution Suggests A General Mechanism For Tight Peptide Binding To Mhc >pdb\|1HSA\|D Chain D, The Three-Dimensional Structure Of Hla-B27 At 2.1 Angstroms Resolution Suggests A General Mechanism For Tight Peptide Binding To Mhc >pdb\|1JGE\|A Chain A, Hla-B2705 Bound To Nona-Peptide M9 >pdb\|1OGT\|A Chain A, Crystal Structure Of Hla-B2705 Complexed With The Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|1W0V\|A Chain A, Crystal Structure Of Hla-B2705 Complexed With The Self- Peptide Tis From Egf-Response Factor 1 >pdb\|2BST\|A Chain A, Crystal Structures And Kir3dl1 Recognition Of Three Immunodominant Viral Peptides Complexed To Hla-B2705 >pdb\|2A83\|A Chain A, Crystal Structure Of Hla-B2705 Complexed With The Glucagon Receptor (Gr) Peptide (Residues 412-420) >pdb\|3B6S\|A Chain A, Crystal Structure Of Hla-B2705 Complexed With The Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|3BP4\|A Chain A, The High Resolution Crystal Structure Of Hla-B2705 In Complex With A Cathepsin A Signal Sequence Peptide Pcata >pdb\|3DTX\|A Chain A, Crystal Structure Of Hla-B2705 Complexed With The Double Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408)	23.1	128	1%	406	100%
NP_647537.1	attractin isoform 1 [Homo sapiens] >sp\|O75882.2\|ATRN_HUMAN RecName: Full=Attractin; AltName: Full=Mahogany homolog; AltName: Full=DPPT-L; Flags: Precursor	23.1	1349	18%	406	100%
1IGA_C	Chain C, Model Of Human Iga1 Determined By Solution Scattering Curve- Fitting And Homology Modelling >pdb\|1IGA\|D Chain D, Model Of Human Iga1 Determined By Solution Scattering Curve- Fitting And Homology Modelling >pdb\|1R70\|A Chain A, Model Of Human Iga2 Determined By Solution Scattering, Curve Fitting And Homology Modelling >pdb\|1R70\|C Chain C, Model Of Human Iga2 Determined By Solution Scattering, Curve Fitting And Homology Modelling >pdb\|2ESG\|L Chain L, Solution Structure Of The Complex Between Immunoglobulin Iga1 And Human Serum Albumin >pdb\|2ESG\|M Chain M, Solution Structure Of The Complex Between Immunoglobulin Iga1 And Human Serum Albumin >pdb\|2QTJ\|L Chain L, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|2QTJ\|M Chain M, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|2QTJ\|N Chain N, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|2QTJ\|O Chain O, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|3CHN\|L Chain L, Solution Structure Of Human Secretory Iga1 >pdb\|3CHN\|M Chain M, Solution Structure Of Human Secretory Iga1 >pdb\|3CHN\|N Chain N, Solution Structure Of Human Secretory Iga1 >pdb\|3CHN\|O Chain O, Solution Structure Of Human Secretory Iga1 >pdb\|3CM9\|L Chain L, Solution Structure Of Human Siga2 >pdb\|3CM9\|M Chain M, Solution Structure Of Human Siga2 >pdb\|3CM9\|N Chain N, Solution Structure Of Human Siga2 >pdb\|3CM9\|O Chain O, Solution Structure Of Human Siga2	23.1	228	3%	406	100%
3CCK_A	Chain A, Human Cd69 >pdb\|3CCK\|B Chain B, Human Cd69	23.1	89.7	0%	406	83%
Q04826.1	RecName: Full=HLA class I histocompatibility antigen, B-40 alpha chain; AltName: Full=MHC class I antigen B*40; AltName: Full=Bw-60; Flags: Precursor	23.1	279	3%	406	100%
1DR9_A	Chain A, Crystal Structure Of A Soluble Form Of B7-1 (Cd80)	23.1	161	1%	406	100%
3F21_A	Chain A, Crystal Structure Of Zalpha In Complex With D(Cacgtg) >pdb\|3F21\|B Chain B, Crystal Structure Of Zalpha In Complex With D(Cacgtg) >pdb\|3F21\|C Chain C, Crystal Structure Of Zalpha In Complex With D(Cacgtg) >pdb\|3F22\|A Chain A, Crystal Structure Of Zalpha In Complex With D(Cgtacg) >pdb\|3F22\|B Chain B, Crystal Structure Of Zalpha In Complex With D(Cgtacg) >pdb\|3F22\|C Chain C, Crystal Structure Of Zalpha In Complex With D(Cgtacg) >pdb\|3F23\|A Chain A, Crystal Structure Of Zalpha In Complex With D(Cggccg) >pdb\|3F23\|B Chain B, Crystal Structure Of Zalpha In Complex With D(Cggccg) >pdb\|3F23\|C Chain C, Crystal Structure Of Zalpha In Complex With D(Cggccg)	23.1	90.1	1%	406	100%
NP_073737.1	E3 ubiquitin-protein ligase MARCH7 [Homo sapiens] >sp\|Q9H992.1\|MARH7_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH7; AltName: Full=Membrane-associated RING finger protein 7; AltName: Full=Membrane-associated RING-CH protein VII; Short=MARCH-VII; AltName: Full=RING finger protein 177; AltName: Full=Axotrophin	23.1	817	10%	406	100%
NP_055215.2	ly6/PLAUR domain-containing protein 3 precursor [Homo sapiens] >emb\|CAA11469.2\| hypothetical protein [Homo sapiens]	23.1	386	5%	406	100%
NP_071898.2	E3 ubiquitin-protein ligase RNF25 [Homo sapiens]	23.1	359	4%	406	100%
NP_004082.1	transcription factor E2F2 [Homo sapiens]	23.1	383	6%	406	100%
1FNS_A	Chain A, Crystal Structure Of The Von Willebrand Factor (Vwf) A1 Domain I546v Mutant In Complex With The Function Blocking Fab Nmc4	23.1	195	2%	406	83%
1A81_A	Chain A, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|C Chain C, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|E Chain E, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|G Chain G, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|I Chain I, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|K Chain K, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam	23.1	397	4%	406	100%
NP_072092.2	C-type lectin domain family 7 member A isoform b [Homo sapiens]	23.1	373	6%	406	100%
P30485.1	RecName: Full=HLA class I histocompatibility antigen, B-47 alpha chain; AltName: Full=MHC class I antigen B*47; AltName: Full=Bw-47; Flags: Precursor	23.1	278	3%	406	100%
3HMW_L	Chain L, Crystal Structure Of Ustekinumab Fab	20.6	243	3%	422	100%
XP_001719515.1	PREDICTED: similar to complement component C3, partial [Homo sapiens]	21.8	1251	16%	981	100%
EAW69070.1	complement component 3, isoform CRA_a [Homo sapiens]	21.8	1239	16%	981	100%
CAA66157.1	immunoglobulin light chain [Homo sapiens]	20.6	111	1%	477	100%
CAB51308.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.6	75.1	0%	477	100%
AAY33396.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	94.4	1%	478	100%
AAY33428.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	91.4	1%	479	100%
AAY33484.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	111	1%	479	100%
AAY33426.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	58.3	0%	479	100%
AAY33480.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	78.1	0%	479	100%
AAY33462.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	75.1	0%	479	100%
AAY33465.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	144	1%	479	100%
AAY33361.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	111	1%	479	100%
AAY33391.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	110	1%	479	100%
AAY33364.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	75.1	0%	479	100%
CAJ90640.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	93.5	1%	481	100%
CAR62808.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.6	74.7	0%	506	80%
3HUJ_A	Chain A, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor >pdb\|3HUJ\|C Chain C, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor	21.0	313	4%	511	100%
1ZT4_A	Chain A, The Crystal Structure Of Human Cd1d With And Without Alpha- Galactosylceramide >pdb\|1ZT4\|C Chain C, The Crystal Structure Of Human Cd1d With And Without Alpha- Galactosylceramide	21.0	331	4%	512	100%
2PO6_A	Chain A, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain >pdb\|2PO6\|E Chain E, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain	21.0	313	4%	514	100%
CAR62890.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.6	57.1	0%	516	80%
2KMS_A	Chain A, Combined High- And Low-Resolution Techniques Reveal Compact Structure In Central Portion Of Factor H Despite Long Inter-Modular Linkers	22.7	165	2%	545	83%
ACN63335.1	B cell antibody heavy chain variable region [Homo sapiens]	22.7	58.8	0%	545	80%
3GAU_A	Chain A, Solution Structure Of Human Complement Factor H In 50 Mm Nacl Buffer >pdb\|3GAV\|A Chain A, Solution Structure Of Human Complement Factor H In 137 Mm Nacl Buffer >pdb\|3GAW\|A Chain A, Solution Structure Of Human Complement Factor H In 250 Mm Nacl Buffer	22.7	1164	14%	545	100%
ACQ41818.1	TLR9 [Homo sapiens] >gb\|ACQ41825.1\| TLR9 [Homo sapiens] >gb\|ACQ41826.1\| TLR9 [Homo sapiens] >gb\|ACQ41827.1\| TLR9 [Homo sapiens] >gb\|ACQ41828.1\| TLR9 [Homo sapiens] >gb\|ACQ41829.1\| TLR9 [Homo sapiens] >gb\|ACQ41830.1\| TLR9 [Homo sapiens] >gb\|ACQ41831.1\| TLR9 [Homo sapiens] >gb\|ACQ41819.2\| TLR9 [Homo sapiens] >gb\|ACQ41820.2\| TLR9 [Homo sapiens] >gb\|ACQ41821.2\| TLR9 [Homo sapiens] >gb\|ACQ41822.2\| TLR9 [Homo sapiens] >gb\|ACQ41823.2\| TLR9 [Homo sapiens] >gb\|ACQ41824.2\| TLR9 [Homo sapiens]	22.7	1283	18%	545	100%
NP_002255.3	importin subunit alpha-1 [Homo sapiens]	22.7	596	7%	545	100%
Q96RL6.2	RecName: Full=Sialic acid-binding Ig-like lectin 11; Short=Sialic acid-binding lectin 11; Short=Siglec-11; Flags: Precursor	22.7	757	11%	545	100%
CAR62860.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.7	107	2%	545	85%
CAR62833.1	immunoglobulin lambda chain variable region [Homo sapiens]	22.7	91.8	1%	545	85%
CAR62780.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.7	106	1%	545	66%
CAR62660.1	immunoglobulin kappa chain variable region [Homo sapiens]	22.7	111	1%	545	100%
3DGG_B	Chain B, Crystal Structure Of Fabox108 >pdb\|3DGG\|D Chain D, Crystal Structure Of Fabox108	22.7	232	3%	545	83%
AAL04540.2	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	22.7	141	1%	545	100%
3DGC_R	Chain R, Structure Of Il-22IL-22r1 >pdb\|3DGC\|S Chain S, Structure Of Il-22IL-22r1	22.7	129	1%	545	100%
BAG37224.1	unnamed protein product [Homo sapiens]	22.7	432	6%	545	85%
A6NKC4.2	RecName: Full=Putative high affinity immunoglobulin gamma Fc receptor IC; Short=IgG Fc receptor IC; AltName: Full=Fc-gamma RIC; Short=hFcgammaRIC; Short=FcRIC; Flags: Precursor	22.7	357	5%	545	100%
NP_001120933.1	NACHT, LRR and PYD domains-containing protein 3 isoform c [Homo sapiens]	22.7	1040	14%	545	100%
2JG8_A	Chain A, Crystallographic Structure Of Human C1q Globular Heads Complexed To Phosphatidyl-Serine >pdb\|2JG8\|D Chain D, Crystallographic Structure Of Human C1q Globular Heads Complexed To Phosphatidyl-Serine >pdb\|2JG9\|A Chain A, Crystallographic Structure Of Human C1q Globular Heads (P1) >pdb\|2JG9\|D Chain D, Crystallographic Structure Of Human C1q Globular Heads (P1) >pdb\|2WNU\|A Chain A, Complex Between C1q Globular Heads And Heparan Sulfate >pdb\|2WNU\|D Chain D, Complex Between C1q Globular Heads And Heparan Sulfate >pdb\|2WNV\|A Chain A, Complex Between C1q Globular Heads And Deoxyribose >pdb\|2WNV\|D Chain D, Complex Between C1q Globular Heads And Deoxyribose	22.7	121	2%	545	80%
2ZG2_A	Chain A, Crystal Structure Of Two N-Terminal Domains Of Native Siglec-5	22.7	145	1%	545	100%
2ZG1_A	Chain A, Crystal Structure Of Two N-Terminal Domains Of Siglec-5 In Complex With 6'-Sialyllactose >pdb\|2ZG3\|A Chain A, Crystal Structure Of Two N-Terminal Domains Of Native Siglec-5 In Complex With 3'-Sialyllactose	22.7	145	1%	545	100%
2VLR_E	Chain E, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|J Chain J, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain	22.7	202	3%	545	100%
NP_001103824.1	zona pellucida sperm-binding protein 3 isoform 1 precursor [Homo sapiens]	22.7	273	3%	545	100%
NP_000237.2	MHC class II transactivator [Homo sapiens]	22.7	1115	14%	545	100%
NP_061985.2	ATP-binding cassette sub-family A member 7 [Homo sapiens]	22.7	2276	30%	545	100%
NP_055938.1	FERM domain-containing protein 4B [Homo sapiens]	22.7	909	12%	545	100%
2H32_H	Chain H, Crystal Structure Of The Pre-B Cell Receptor	22.7	247	4%	545	100%
NP_149084.2	tripartite motif-containing protein 5 isoform delta [Homo sapiens]	22.7	415	5%	545	100%
NP_115582.3	protein NLRC5 [Homo sapiens]	22.7	1802	24%	545	100%
ABG38389.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	127	2%	545	85%
ABG38388.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	127	2%	545	85%
ABG38356.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	110	1%	545	85%
ABG38385.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	163	2%	545	85%
ABG38358.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	94.4	1%	545	85%
3CU7_A	Chain A, Human Complement Component 5 >pdb\|3CU7\|B Chain B, Human Complement Component 5 >pdb\|3KLS\|A Chain A, Structure Of Complement C5 In Complex With Ssl7 >pdb\|3KLS\|B Chain B, Structure Of Complement C5 In Complex With Ssl7 >pdb\|3KM9\|A Chain A, Structure Of Complement C5 In Complex With The C-Terminal Beta-Grasp Domain Of Ssl7 >pdb\|3KM9\|B Chain B, Structure Of Complement C5 In Complex With The C-Terminal Beta-Grasp Domain Of Ssl7 >gb\|AAI13739.1\| Complement component 5 [Homo sapiens] >gb\|EAW87480.1\| complement component 5 [Homo sapiens]	22.7	1385	19%	545	100%
NP_001120934.1	NACHT, LRR and PYD domains-containing protein 3 isoform d [Homo sapiens]	22.7	1159	15%	545	100%
2D3V_A	Chain A, Crystal Structure Of Leukocyte Ig-Like Receptor A5 (Lilra5LIR9ILT11)	22.7	195	2%	545	100%
2BC4_A	Chain A, Crystal Structure Of Hla-Dm >pdb\|2BC4\|C Chain C, Crystal Structure Of Hla-Dm	22.7	231	4%	545	83%
NP_963917.2	C-type lectin domain family 12 member A isoform beta [Homo sapiens]	22.7	225	4%	545	83%
NP_612210.4	C-type lectin domain family 12 member A isoform alpha [Homo sapiens]	22.7	342	7%	545	83%
Q86TG7.2	RecName: Full=Retrotransposon-derived protein PEG10; AltName: Full=Paternally expressed gene 10 protein; AltName: Full=Retrotransposon-derived gag-like polyprotein; AltName: Full=Embryonal carcinoma differentiation-regulated protein; AltName: Full=Mammalian retrotransposon-derived protein 2; AltName: Full=Myelin expression factor 3-like protein 1; Short=MEF3-like protein 1; AltName: Full=Retrotransposon gag domain-containing protein 3; AltName: Full=Ty3/Gypsy-like protein	22.7	1020	11%	545	100%
Q2KHT3.2	RecName: Full=Protein CLEC16A	22.7	1219	16%	545	100%
NP_899632.1	NACHT, LRR and PYD domains-containing protein 3 isoform b [Homo sapiens]	22.7	1040	14%	545	100%
NP_004886.3	NACHT, LRR and PYD domains-containing protein 3 isoform a [Homo sapiens] >ref\|NP_001073289.1\| NACHT, LRR and PYD domains-containing protein 3 isoform a [Homo sapiens]	22.7	1159	15%	545	100%
NP_005453.2	melanoma-associated antigen C1 [Homo sapiens]	22.7	1786	17%	545	100%
NP_064509.2	interferon kappa precursor [Homo sapiens]	22.7	218	2%	545	100%
NP_001108624.1	CMRF35-like molecule 4 precursor [Homo sapiens] >gb\|ABM30606.1\| immune receptor CD300d [Homo sapiens]	22.7	248	4%	545	100%
NP_005609.3	delta-like protein 1 precursor [Homo sapiens]	22.7	590	8%	545	83%
NP_149083.2	tripartite motif-containing protein 5 isoform gamma [Homo sapiens]	22.7	458	6%	545	100%
NP_001726.2	complement C5 preproprotein [Homo sapiens] >sp\|P01031.4\|CO5_HUMAN RecName: Full=Complement C5; AltName: Full=C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4; Contains: RecName: Full=Complement C5 beta chain; Contains: RecName: Full=Complement C5 alpha chain; Contains: RecName: Full=C5a anaphylatoxin; Contains: RecName: Full=Complement C5 alpha' chain; Flags: Precursor >gb\|ABD48959.1\| complement component 5 [Homo sapiens] >gb\|AAI13741.1\| Complement component 5 [Homo sapiens]	22.7	1385	19%	545	100%
1GYF_A	Chain A, Gyf Domain From Human Cd2bp2 Protein	22.7	57.1	0%	545	100%
NP_001171571.1	T-cell surface glycoprotein CD8 beta chain isoform 6 precursor [Homo sapiens]	22.7	265	3%	545	100%
NP_009086.4	zona pellucida sperm-binding protein 3 isoform 2 [Homo sapiens]	22.7	255	3%	545	100%
NP_001127925.1	desmoglein-4 isoform 1 preproprotein [Homo sapiens]	22.7	1123	13%	545	100%
NP_776215.1	interleukin-1 receptor antagonist protein isoform 4 [Homo sapiens]	22.7	145	2%	545	100%
AAC41969.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	22.7	418	5%	545	83%
AAC41971.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	22.7	415	5%	545	83%
AAC41975.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	22.7	452	6%	545	83%
AAC41970.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	22.7	415	5%	545	83%
NP_570118.1	mucosal addressin cell adhesion molecule 1 isoform b precursor [Homo sapiens]	22.7	256	5%	545	85%
AAC41974.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	22.7	394	5%	545	83%
AAK91825.1	MHC class II antigen [Homo sapiens]	22.7	345	5%	545	100%
NP_570116.2	mucosal addressin cell adhesion molecule 1 isoform a precursor [Homo sapiens]	22.7	320	6%	545	100%
NP_757362.1	T-cell surface glycoprotein CD8 beta chain isoform 2 precursor [Homo sapiens]	22.7	355	4%	545	100%
AAC41973.1	MHC class II HLA-DQ-beta-1 [Homo sapiens]	22.7	394	5%	545	83%
AAA59777.1	MHC class II HLA-DR-beta [Homo sapiens]	22.7	341	5%	545	100%
AAA51856.1	complement component C5 [Homo sapiens]	22.7	1111	16%	545	100%
P20701.3	RecName: Full=Integrin alpha-L; AltName: Full=Leukocyte adhesion glycoprotein LFA-1 alpha chain; Short=LFA-1A; AltName: Full=Leukocyte function-associated molecule 1 alpha chain; AltName: Full=CD11 antigen-like family member A; AltName: CD_antigen=CD11a; Flags: Precursor	22.7	1318	19%	545	100%
AAY57097.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.7	123	2%	545	100%
AAY57063.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.7	146	2%	545	80%
AAY33401.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	22.7	110	1%	545	85%
AAY33404.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	22.7	146	2%	545	100%
AAY33444.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	22.7	120	2%	545	71%
AAY33230.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	22.7	229	2%	545	83%
AAY33231.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33267.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	22.7	176	2%	545	83%
AAY33229.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	22.7	159	1%	545	83%
AAY16635.1	immunoglobulin kappa light chain [Homo sapiens]	22.7	105	2%	545	80%
AAW65982.1	CXORF15 [Homo sapiens]	22.7	605	9%	545	85%
NP_004834.1	interleukin-27 receptor subunit alpha precursor [Homo sapiens] >sp\|Q6UWB1.2\|I27RA_HUMAN RecName: Full=Interleukin-27 receptor subunit alpha; Short=IL-27 receptor subunit alpha; Short=IL-27R subunit alpha; Short=IL-27R-alpha; Short=IL-27RA; AltName: Full=WSX-1; AltName: Full=Type I T-cell cytokine receptor; Short=TCCR; AltName: Full=Cytokine receptor-like 1; AltName: Full=ZcytoR1; Flags: Precursor	22.7	736	9%	545	100%
NP_068818.4	major histocompatibility complex, class II, DR beta 4 precursor [Homo sapiens]	22.7	379	5%	545	100%
NP_871714.1	leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 2 [Homo sapiens]	22.7	282	4%	545	100%
NP_870994.1	leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 3 [Homo sapiens]	22.7	267	3%	545	100%
NP_005186.2	CCAAT/enhancer-binding protein delta [Homo sapiens] >sp\|P49716.2\|CEBPD_HUMAN RecName: Full=CCAAT/enhancer-binding protein delta; Short=C/EBP delta; AltName: Full=Nuclear factor NF-IL6-beta; Short=NF-IL6-beta	22.7	350	5%	545	100%
NP_871715.1	leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 4 [Homo sapiens]	22.7	247	3%	545	100%
NP_112218.2	toll-like receptor 10 precursor [Homo sapiens] >ref\|NP_001017388.1\| toll-like receptor 10 precursor [Homo sapiens] >sp\|Q9BXR5.2\|TLR10_HUMAN RecName: Full=Toll-like receptor 10; AltName: CD_antigen=CD290; Flags: Precursor	22.7	797	11%	545	83%
Q13586.3	RecName: Full=Stromal interaction molecule 1; Flags: Precursor	22.7	709	12%	545	85%
NP_067073.1	leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1 [Homo sapiens] >sp\|A6NI73.1\|LIRA5_HUMAN RecName: Full=Leukocyte immunoglobulin-like receptor subfamily A member 5; AltName: Full=Leukocyte immunoglobulin-like receptor 9; Short=LIR-9; AltName: Full=Immunoglobulin-like transcript 11; Short=ILT-11; AltName: Full=CD85 antigen-like family member F; AltName: CD_antigen=CD85f; Flags: Precursor	22.7	301	4%	545	100%
1SYX_B	Chain B, The Crystal Structure Of A Binary U5 Snrnp Complex >pdb\|1SYX\|D Chain D, The Crystal Structure Of A Binary U5 Snrnp Complex >pdb\|1SYX\|F Chain F, The Crystal Structure Of A Binary U5 Snrnp Complex	22.7	90.1	1%	545	100%
2AXJ_A	Chain A, Crystal Structures Of T Cell Receptor Beta Chains Related To Rheumatoid Arthritis >pdb\|2AXJ\|B Chain B, Crystal Structures Of T Cell Receptor Beta Chains Related To Rheumatoid Arthritis	22.7	233	3%	545	100%
2AXH_A	Chain A, Crystal Structures Of T Cell Receptor Beta Chains Related To Rheumatoid Arthritis >pdb\|2AXH\|B Chain B, Crystal Structures Of T Cell Receptor Beta Chains Related To Rheumatoid Arthritis	22.7	222	3%	545	100%
Q14264.2	RecName: Full=HERV-R_7q21.2 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=ERV-3 envelope protein; Short=ERV3 envelope protein; AltName: Full=HERV-R envelope protein; Short=ERV-R envelope protein; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor	22.7	673	10%	545	100%
1HAQ_A	Chain A, Four Models Of Human Factor H Determined By Solution Scattering Curve-Fitting And Homology Modelling	22.7	1147	14%	545	100%
1PK6_A	Chain A, Globular Head Of The Complement System Protein C1q	22.7	121	2%	545	80%
CAD88642.1	immunoglobulin lambda light chain [Homo sapiens]	22.7	110	1%	545	83%
CAD88750.1	immunoglobulin lambda light chain variable region [Homo sapiens]	22.7	194	3%	545	100%
1IM9_A	Chain A, Crystal Structure Of The Human Natural Killer Cell Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4 >pdb\|1IM9\|E Chain E, Crystal Structure Of The Human Natural Killer Cell Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4	22.7	124	1%	545	100%
CAC03926.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
NP_001138619.1	corticotropin-releasing factor receptor 1 isoform 3 [Homo sapiens]	22.7	444	6%	545	83%
P30510.2	RecName: Full=HLA class I histocompatibility antigen, Cw-14 alpha chain; AltName: Full=MHC class I antigen Cw*14; Flags: Precursor	22.7	290	3%	545	100%
NP_006712.2	adenosine kinase isoform b [Homo sapiens]	22.7	294	3%	545	83%
NP_000568.1	interleukin-1 receptor antagonist protein isoform 3 [Homo sapiens]	22.7	176	2%	545	100%
NP_055461.1	phosphatidate phosphatase LPIN2 [Homo sapiens]	22.7	937	11%	545	100%
Q9N2J9.1	RecName: Full=HERV-H_3q26 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=Env protein HERV-H/p60; AltName: Full=HERV-H/env60; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor	22.7	848	12%	545	100%
Q95604.1	RecName: Full=HLA class I histocompatibility antigen, Cw-17 alpha chain; AltName: Full=MHC class I antigen Cw*17; Flags: Precursor	22.7	446	5%	545	100%
NP_002695.1	platelet basic protein preproprotein [Homo sapiens]	22.7	108	1%	545	80%
NP_817123.1	desmoglein-4 isoform 2 preproprotein [Homo sapiens]	22.7	1155	13%	545	100%
NP_005067.1	contactin-2 precursor [Homo sapiens]	22.7	1130	14%	545	100%
P30508.2	RecName: Full=HLA class I histocompatibility antigen, Cw-12 alpha chain; AltName: Full=MHC class I antigen Cw*12; Flags: Precursor	22.7	290	3%	545	100%
CAB59385.1	T cell receptor beta chain variable region [Homo sapiens]	22.7	99	1%	545	100%
NP_775494.1	protein SSX7 [Homo sapiens]	22.7	219	3%	545	100%
CAC03763.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
Q29960.1	RecName: Full=HLA class I histocompatibility antigen, Cw-16 alpha chain; AltName: Full=MHC class I antigen Cw*16; Flags: Precursor	22.7	240	3%	545	100%
NP_000557.1	high affinity immunoglobulin gamma Fc receptor I precursor [Homo sapiens] >sp\|P12314.2\|FCGR1_HUMAN RecName: Full=High affinity immunoglobulin gamma Fc receptor I; Short=IgG Fc receptor I; AltName: Full=Fc-gamma RIA; Short=FcgammaRIa; AltName: Full=Fc-gamma RI; Short=FcRI; AltName: CD_antigen=CD64; Flags: Precursor	22.7	523	8%	545	100%
CAB46475.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	94.4	1%	545	85%
NP_002116.2	major histocompatibility complex, class II, DR beta 5 precursor [Homo sapiens]	22.7	325	4%	545	100%
Q14258.1	RecName: Full=E3 ubiquitin/ISG15 ligase TRIM25; AltName: Full=Ubiquitin/ISG15-conjugating enzyme TRIM25; AltName: Full=Tripartite motif-containing protein 25; AltName: Full=Zinc finger protein 147; AltName: Full=Estrogen-responsive finger protein; AltName: Full=RING finger protein 147	22.7	620	8%	545	100%
NP_004922.1	T-cell surface glycoprotein CD8 beta chain isoform 5 precursor [Homo sapiens]	22.7	320	4%	545	100%
NP_037483.1	T-box transcription factor TBX21 [Homo sapiens]	22.7	342	3%	545	100%
CAB76467.1	immunoglobulin light chain variable region [Homo sapiens]	22.7	110	1%	545	85%
P30499.1	RecName: Full=HLA class I histocompatibility antigen, Cw-1 alpha chain; AltName: Full=MHC class I antigen Cw*1; Flags: Precursor	22.7	322	4%	545	100%
P24394.1	RecName: Full=Interleukin-4 receptor subunit alpha; Short=IL-4 receptor subunit alpha; Short=IL-4R subunit alpha; Short=IL-4R-alpha; Short=IL-4RA; AltName: CD_antigen=CD124; Contains: RecName: Full=Soluble interleukin-4 receptor subunit alpha; Short=Soluble IL-4 receptor subunit alpha; Short=Soluble IL-4R-alpha; Short=sIL4Ralpha/prot; AltName: Full=IL-4-binding protein; Short=IL4-BP; Flags: Precursor	22.7	779	9%	545	100%
P38398.2	RecName: Full=Breast cancer type 1 susceptibility protein; AltName: Full=RING finger protein 53	22.7	1470	19%	545	100%
1KFA_H	Chain H, Crystal Structure Of Fab Fragment Complexed With Gibberellin A4 >pdb\|1KFA\|I Chain I, Crystal Structure Of Fab Fragment Complexed With Gibberellin A4	22.7	141	2%	545	80%
NP_003821.1	sialic acid-binding Ig-like lectin 5 precursor [Homo sapiens]	22.7	583	6%	545	100%
NP_149974.2	long palate, lung and nasal epithelium carcinoma-associated protein 1 precursor [Homo sapiens]	22.7	514	8%	545	100%
P04222.2	RecName: Full=HLA class I histocompatibility antigen, Cw-3 alpha chain; AltName: Full=MHC class I antigen Cw*3; Flags: Precursor	22.7	307	3%	545	100%
CAB59384.1	T cell receptor beta chain variable region [Homo sapiens]	22.7	81.9	1%	545	100%
CAC03961.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
Q8IZJ1.2	RecName: Full=Netrin receptor UNC5B; AltName: Full=Protein unc-5 homolog B; AltName: Full=Protein unc-5 homolog 2; AltName: Full=p53-regulated receptor for death and life protein 1; Flags: Precursor	22.7	966	13%	545	100%
NP_005627.1	protein SSX4 isoform a [Homo sapiens] >ref\|NP_001030004.1\| protein SSX4 isoform a [Homo sapiens]	22.7	135	1%	545	100%
NP_001114.2	adenosine kinase isoform a [Homo sapiens]	22.7	278	3%	545	83%
CAB51714.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.7	73.4	1%	545	100%
NP_002114.3	HLA class II histocompatibility antigen, DQ beta 1 chain precursor [Homo sapiens]	22.7	394	5%	545	83%
CAC03869.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
NP_005095.1	bromodomain-containing protein 2 [Homo sapiens] >ref\|NP_001106653.1\| bromodomain-containing protein 2 [Homo sapiens]	22.7	878	12%	545	100%
1EFX_A	Chain A, Structure Of A Complex Between The Human Natural Killer Cell Receptor Kir2dl2 And A Class I Mhc Ligand Hla-Cw3	22.7	122	1%	545	100%
CAC03979.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
NP_742099.1	T-cell surface glycoprotein CD8 beta chain isoform 3 precursor [Homo sapiens]	22.7	336	4%	545	100%
Q92637.1	RecName: Full=High affinity immunoglobulin gamma Fc receptor IB; Short=IgG Fc receptor IB; AltName: Full=Fc-gamma RIB; Short=hFcgammaRIB; Short=FcRIB; Flags: Precursor	22.7	391	6%	545	100%
Q9TNN7.1	RecName: Full=HLA class I histocompatibility antigen, Cw-5 alpha chain; AltName: Full=MHC class I antigen Cw*5; Flags: Precursor	22.7	280	3%	545	100%
NP_783629.1	protein SSX2 isoform b [Homo sapiens]	22.7	132	2%	545	72%
P02745.2	RecName: Full=Complement C1q subcomponent subunit A; Flags: Precursor	22.7	139	2%	545	80%
NP_060393.1	E3 ubiquitin-protein ligase MARCH1 isoform 2 [Homo sapiens]	22.7	183	2%	545	85%
NP_776213.1	interleukin-1 receptor antagonist protein isoform 2 [Homo sapiens]	22.7	176	2%	545	100%
CAC03939.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
1QQD_A	Chain A, Crystal Structure Of Hla-Cw4, A Ligand For The Kir2d Natural Killer Cell Inhibitory Receptor	22.7	124	1%	545	100%
NP_072049.2	major histocompatibility complex, class II, DR beta 3 precursor [Homo sapiens]	22.7	401	6%	545	100%
CAB51711.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.7	107	1%	545	100%
CAC03973.1	T-cell receptor beta chain [Homo sapiens]	22.7	99	1%	545	100%
CAB59423.1	T cell receptor beta chain variable region [Homo sapiens]	22.7	99	1%	545	100%
CAC03866.1	T-cell receptor beta chain [Homo sapiens]	22.7	118	1%	545	100%
NP_059138.1	toll-like receptor 9 isoform A precursor [Homo sapiens] >sp\|Q9NR96.2\|TLR9_HUMAN RecName: Full=Toll-like receptor 9; AltName: CD_antigen=CD289; Flags: Precursor	22.7	1283	18%	545	100%
Q9P0W0.1	RecName: Full=Interferon kappa; Short=IFN-kappa; Flags: Precursor	22.7	184	1%	545	100%
NP_055173.1	C-type lectin domain family 4 member E [Homo sapiens] >sp\|Q9ULY5.1\|CLC4E_HUMAN RecName: Full=C-type lectin domain family 4 member E; AltName: Full=C-type lectin superfamily member 9; AltName: Full=Macrophage-inducible C-type lectin	22.7	301	4%	545	100%
NP_057520.2	PHD finger protein 20 [Homo sapiens] >sp\|Q9BVI0.2\|PHF20_HUMAN RecName: Full=PHD finger protein 20; AltName: Full=Hepatocellular carcinoma-associated antigen 58; AltName: Full=Glioma-expressed antigen 2; AltName: Full=Transcription factor TZP; AltName: Full=Novel zinc finger protein	22.7	885	11%	545	100%
NP_004373.2	corticotropin-releasing factor receptor 1 isoform 2 [Homo sapiens]	22.7	493	6%	545	83%
P30505.1	RecName: Full=HLA class I histocompatibility antigen, Cw-8 alpha chain; AltName: Full=MHC class I antigen Cw*8; Flags: Precursor	22.7	280	3%	545	100%
1A1X_A	Chain A, Crystal Structure Of Mtcp-1 Involved In T Cell Malignancies	22.7	61.7	0%	545	66%
P30501.1	RecName: Full=HLA class I histocompatibility antigen, Cw-2 alpha chain; AltName: Full=MHC class I antigen Cw*2; Flags: Precursor	22.7	275	3%	545	100%
AAA51925.1	complement component C5 [Homo sapiens]	22.7	1385	19%	545	100%
NP_006796.1	heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]	22.7	179	2%	545	100%
NP_742100.1	T-cell surface glycoprotein CD8 beta chain isoform 4 precursor [Homo sapiens]	22.7	282	3%	545	100%
NP_776214.1	interleukin-1 receptor antagonist protein isoform 1 precursor [Homo sapiens]	22.7	210	2%	545	100%
NP_001551.1	interleukin-13 receptor subunit alpha-1 precursor [Homo sapiens]	22.7	352	5%	545	100%
NP_002115.2	major histocompatibility complex, class II, DR beta 1 precursor [Homo sapiens]	22.7	344	5%	545	100%
CAC03920.1	T-cell receptor beta chain [Homo sapiens]	22.7	117	1%	545	100%
NP_001138618.1	corticotropin-releasing factor receptor 1 isoform 1 [Homo sapiens]	22.7	479	5%	545	100%
P30504.1	RecName: Full=HLA class I histocompatibility antigen, Cw-4 alpha chain; AltName: Full=MHC class I antigen Cw*4; Flags: Precursor	22.7	315	3%	545	100%
Q29963.2	RecName: Full=HLA class I histocompatibility antigen, Cw-6 alpha chain; AltName: Full=MHC class I antigen Cw*6; Flags: Precursor	22.7	306	4%	545	100%
NP_000368.1	wiskott-Aldrich syndrome protein [Homo sapiens]	22.7	833	7%	545	100%
Q29865.1	RecName: Full=HLA class I histocompatibility antigen, Cw-18 alpha chain; AltName: Full=MHC class I antigen Cw*18; Flags: Precursor	22.7	229	3%	545	100%
NP_066294.1	protein SSX3 isoform a [Homo sapiens]	22.7	153	2%	545	80%
NP_065865.1	E3 ubiquitin-protein ligase MARCH4 precursor [Homo sapiens] >sp\|Q9P2E8.2\|MARH4_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH4; AltName: Full=Membrane-associated RING finger protein 4; AltName: Full=Membrane-associated RING-CH protein IV; Short=MARCH-IV; AltName: Full=RING finger protein 174; Flags: Precursor	22.7	566	6%	545	100%
CAB59406.1	T cell receptor beta chain variable region [Homo sapiens]	22.7	99	1%	545	100%
NP_005626.1	protein SSX1 [Homo sapiens]	22.7	107	1%	545	80%
P30484.1	RecName: Full=HLA class I histocompatibility antigen, B-46 alpha chain; AltName: Full=MHC class I antigen B*46; AltName: Full=Bw-46; Flags: Precursor	22.7	218	2%	545	100%
AAG27297.1	type-I T cell cytokine receptor [Homo sapiens]	22.7	736	9%	545	100%
CAB59372.1	T cell receptor beta chain variable region [Homo sapiens]	22.7	133	1%	545	100%
AAK26744.1	toll-like receptor 10 [Homo sapiens]	22.7	797	11%	545	83%
NP_002108.4	HLA class I histocompatibility antigen, Cw-1 alpha chain precursor [Homo sapiens] >sp\|P10321.3\|1C07_HUMAN RecName: Full=HLA class I histocompatibility antigen, Cw-7 alpha chain; AltName: Full=MHC class I antigen Cw*7; Flags: Precursor	22.7	310	5%	545	83%
NP_149023.2	tripartite motif-containing protein 5 isoform alpha [Homo sapiens]	22.7	580	8%	545	100%
NP_078987.3	GTPase IMAP family member 6 [Homo sapiens] >sp\|Q6P9H5.1\|GIMA6_HUMAN RecName: Full=GTPase IMAP family member 6; AltName: Full=Immunity-associated nucleotide 6 protein; Short=IAN-6; Short=hIAN6; AltName: Full=Immunity-associated nucleotide 2 protein; Short=IAN-2; Short=hIAN2 >gb\|EAL24483.1\| human immune associated nucleotide 2 [Homo sapiens] >emb\|CAH18208.1\| hypothetical protein [Homo sapiens]	22.7	378	5%	545	85%
NP_001874.2	corticotropin-releasing factor receptor 2 precursor [Homo sapiens]	22.7	690	10%	545	85%
Q9UKJ1.3	RecName: Full=Paired immunoglobulin-like type 2 receptor alpha; AltName: Full=Inhibitory receptor PILR-alpha; AltName: Full=Cell surface receptor FDF03; Flags: Precursor	22.7	457	7%	545	83%
2WII_A	Chain A, Complement C3b In Complex With Factor H Domains 1-4 >pdb\|2WIN\|A Chain A, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|C Chain C, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|E Chain E, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|G Chain G, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|3L3O\|A Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3L3O\|D Chain D, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3L5N\|A Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3b >pdb\|3NMS\|A Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement C3c >pdb\|3NSA\|A Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3NSA\|D Chain D, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c	21.4	618	9%	553	100%
2HR0_A	Chain A, Structure Of Complement C3b: Insights Into Complement Activation And Regulation >pdb\|2I07\|A Chain A, Human Complement Component C3b	21.4	615	9%	553	100%
3G6J_A	Chain A, C3b In Complex With A C3b Specific Fab >pdb\|3G6J\|C Chain C, C3b In Complex With A C3b Specific Fab	21.4	618	9%	553	100%
2A73_A	Chain A, Human Complement Component C3 >pdb\|2A74\|A Chain A, Human Complement Component C3c >pdb\|2A74\|D Chain D, Human Complement Component C3c >pdb\|2QKI\|A Chain A, Human C3c In Complex With The Inhibitor Compstatin >pdb\|2QKI\|D Chain D, Human C3c In Complex With The Inhibitor Compstatin	21.4	615	9%	553	100%
2ICE_A	Chain A, Crig Bound To C3c >pdb\|2ICE\|D Chain D, Crig Bound To C3c >pdb\|2ICF\|A Chain A, Crig Bound To C3b	21.4	615	9%	553	100%
NP_003916.1	methyl-CpG-binding domain protein 4 [Homo sapiens]	21.8	581	8%	558	100%
AAY57122.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	91.0	1%	600	100%
ACA28841.1	T cell receptor variable alpha 38 chain [Homo sapiens]	21.8	439	6%	981	100%
NP_116220.1	putative protein ORAI2-2 [Homo sapiens] >ref\|NP_001119812.1\| putative protein ORAI2-2 [Homo sapiens] >sp\|Q96SN7.1\|ORAI2_HUMAN RecName: Full=Protein orai-2; AltName: Full=Transmembrane protein 142B; AltName: Full=CAP-binding protein complex-interacting protein 2	22.3	480	7%	666	100%
3LOH_E	Chain E, Structure Of The Insulin Receptor Ectodomain, Including Ct P	22.3	948	11%	731	100%
2WY3_A	Chain A, Structure Of The Hcmv Ul16-Micb Complex Elucidates Select Binding Of A Viral Immunoevasin To Diverse Nkg2d Ligands >pdb\|2WY3\|C Chain C, Structure Of The Hcmv Ul16-Micb Complex Elucidates Select Binding Of A Viral Immunoevasin To Diverse Nkg2d Ligands	22.3	325	5%	731	83%
3K6S_B	Chain B, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K6S\|D Chain D, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K6S\|F Chain F, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K6S\|H Chain H, Structure Of Integrin Alphaxbeta2 Ectodomain >pdb\|3K71\|B Chain B, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K71\|D Chain D, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K71\|F Chain F, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K71\|H Chain H, Structure Of Integrin Alphax Beta2 Ectodomain >pdb\|3K72\|B Chain B, Structure Of Integrin Alphax Beta2 >pdb\|3K72\|D Chain D, Structure Of Integrin Alphax Beta2	22.3	557	7%	731	100%
NP_001157962.1	disintegrin and metalloproteinase domain-containing protein 8 isoform 3 precursor [Homo sapiens]	22.3	722	10%	731	100%
NP_001157961.1	disintegrin and metalloproteinase domain-containing protein 8 isoform 2 precursor [Homo sapiens]	22.3	741	10%	731	100%
NP_001100.3	disintegrin and metalloproteinase domain-containing protein 8 isoform 1 precursor [Homo sapiens]	22.3	926	12%	731	100%
3HRZ_D	Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor B >pdb\|3HS0\|D Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor B >pdb\|3HS0\|I Chain I, Cobra Venom Factor (Cvf) In Complex With Human Factor B	22.3	602	7%	731	100%
2WIN_I	Chain I, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|J Chain J, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|K Chain K, C3 Convertase (C3bbb) Stabilized By Scin >pdb\|2WIN\|L Chain L, C3 Convertase (C3bbb) Stabilized By Scin	22.3	460	5%	731	100%
XP_002343974.1	PREDICTED: similar to C4A protein isoform 2 [Homo sapiens]	22.3	1634	22%	731	100%
ACJ37248.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	22.3	125	1%	731	100%
3DXA_D	Chain D, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|I Chain I, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|N Chain N, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen	22.3	233	3%	731	100%
3DX9_A	Chain A, Crystal Structure Of The Dm1 Tcr At 2.75a >pdb\|3DX9\|C Chain C, Crystal Structure Of The Dm1 Tcr At 2.75a	22.3	233	3%	731	100%
AAI71786.1	Complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1636	23%	731	100%
NP_001138751.1	mu-type opioid receptor isoform MOR-1H [Homo sapiens]	22.3	689	10%	731	100%
NP_001129202.1	target of Myb protein 1 isoform 4 [Homo sapiens]	22.3	498	7%	731	100%
NP_001129201.1	target of Myb protein 1 isoform 3 [Homo sapiens]	22.3	461	7%	731	100%
CAR62954.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	232	3%	731	100%
CAR62953.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	124	1%	731	100%
CAR62912.1	immunoglobulin lambda chain variable region [Homo sapiens]	22.3	73.0	1%	731	100%
CAR62909.1	immunoglobulin lambda chain variable region [Homo sapiens]	22.3	123	1%	731	100%
CAR62748.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	137	1%	731	100%
CAR62721.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	130	1%	731	100%
CAR62605.1	immunoglobulin lambda chain variable region [Homo sapiens]	22.3	105	1%	731	100%
CAR62550.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	266	3%	731	100%
AAI46850.1	Complement component 4A (Rodgers blood group) [Homo sapiens] >gb\|AAI44547.1\| Complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1638	23%	731	100%
CAQ10919.1	complement component 4B (Childo blood group) [Homo sapiens]	22.3	1621	23%	731	100%
XP_002343973.1	PREDICTED: similar to C4A protein isoform 1 [Homo sapiens] >emb\|CAQ10915.1\| complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1689	24%	731	100%
CAQ07657.1	complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1654	24%	731	100%
2OTP_A	Chain A, Crystal Structure Of Immunoglobulin-Like Transcript 1 (Ilt1LIR7LILRA2) >pdb\|2OTP\|B Chain B, Crystal Structure Of Immunoglobulin-Like Transcript 1 (Ilt1LIR7LILRA2)	22.3	180	2%	731	100%
AAI51205.1	Complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1623	24%	731	100%
AAI46674.1	C4A protein [Homo sapiens]	22.3	1599	22%	731	100%
NP_919270.2	indoleamine 2,3-dioxygenase 2 [Homo sapiens]	22.3	381	5%	731	100%
NP_001153890.1	Z-DNA-binding protein 1 isoform c [Homo sapiens]	22.3	275	4%	731	100%
NP_001135751.1	ribonuclease H2 subunit B isoform 2 [Homo sapiens]	22.3	305	4%	731	100%
EAX03569.1	hCG2001591 [Homo sapiens]	22.3	1621	23%	731	100%
NP_997325.2	putative uncharacterized protein C14orf181 [Homo sapiens]	22.3	158	2%	731	100%
NP_667345.1	transcriptional repressor NF-X1 isoform 3 [Homo sapiens]	22.3	807	10%	731	100%
NP_001221.2	caspase-10 isoform a preproprotein [Homo sapiens]	22.3	588	8%	731	100%
NP_444254.3	myosin light chain kinase, smooth muscle isoform 2 [Homo sapiens]	22.3	1312	17%	731	100%
NP_444256.3	myosin light chain kinase, smooth muscle isoform 3B [Homo sapiens]	22.3	1296	17%	731	100%
NP_444253.3	myosin light chain kinase, smooth muscle isoform 1 [Homo sapiens]	22.3	1328	17%	731	100%
NP_444255.3	myosin light chain kinase, smooth muscle isoform 3A [Homo sapiens]	22.3	1312	17%	731	100%
ABG38428.1	immunglobulin heavy chain variable region [Homo sapiens]	22.3	197	3%	731	100%
ABG38426.1	immunglobulin heavy chain variable region [Homo sapiens]	22.3	197	3%	731	100%
ABG38424.1	immunglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
ABG38439.1	immunglobulin heavy chain variable region [Homo sapiens]	22.3	163	2%	731	100%
ABG38430.1	immunglobulin heavy chain variable region [Homo sapiens]	22.3	197	3%	731	100%
ABG38383.1	immunoglobulin light chain variable region [Homo sapiens]	22.3	110	1%	731	100%
CAJ90638.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	124	1%	731	83%
NP_001035228.1	chemokine-like factor isoform e [Homo sapiens]	22.3	159	2%	731	80%
AAH63289.1	Complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1635	23%	731	100%
NP_009224.2	complement C4-A preproprotein [Homo sapiens] >emb\|CAQ09284.1\| complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1654	24%	731	100%
CAI41782.1	complement component 4A (Rodgers blood group) [Homo sapiens] >emb\|CAI41869.1\| complement component 4A (Rodgers blood group) [Homo sapiens]	22.3	1654	24%	731	100%
NP_078846.2	ribonuclease H2 subunit B isoform 1 [Homo sapiens]	22.3	305	4%	731	100%
NP_001077379.1	signal-regulatory protein beta-1 isoform 2 precursor [Homo sapiens]	22.3	258	4%	731	83%
NP_434700.2	caspase recruitment domain-containing protein 9 isoform 1 [Homo sapiens]	22.3	414	5%	731	100%
NP_001093326.2	NF-kappa-B essential modulator isoform b [Homo sapiens]	22.3	534	7%	731	100%
NP_002495.2	transcriptional repressor NF-X1 isoform 1 [Homo sapiens] >sp\|Q12986.2\|NFX1_HUMAN RecName: Full=Transcriptional repressor NF-X1; AltName: Full=Nuclear transcription factor, X box-binding protein 1	22.3	1156	14%	731	100%
Q29980.1	RecName: Full=MHC class I polypeptide-related sequence B; Short=MIC-B; Flags: Precursor	22.3	373	6%	731	83%
NP_001002029.3	complement C4-B preproprotein [Homo sapiens] >emb\|CAB89302.1\| dJ34F7.4 (complement component 4A) [Homo sapiens] >gb\|AAR89163.1\| C4B1 [Homo sapiens] >emb\|CAI17475.1\| complement component 4B (Childo blood group) [Homo sapiens] >emb\|CAQ09289.1\| complement component 4B (Childo blood group) [Homo sapiens]	22.3	1621	23%	731	100%
NP_006056.2	signal-regulatory protein beta-1 isoform 1 precursor [Homo sapiens]	22.3	477	8%	731	83%
NP_001129204.1	target of Myb protein 1 isoform 2 [Homo sapiens]	22.3	497	7%	731	100%
AAB67980.1	complement component C4 [Homo sapiens] >emb\|CAM26066.1\| complement component C4B (Childo blood group) [Homo sapiens] >emb\|CAM26069.1\| complement component C4B (Childo blood group) 2 [Homo sapiens]	22.3	1621	23%	731	100%
NP_624302.1	mannan-binding lectin serine protease 1 isoform 2 precursor [Homo sapiens]	22.3	675	8%	731	100%
O15117.2	RecName: Full=FYN-binding protein; AltName: Full=FYN-T-binding protein; AltName: Full=FYB-120/130; Short=p120/p130; AltName: Full=SLP-76-associated phosphoprotein; AltName: Full=SLAP-130; AltName: Full=Adhesion and degranulation promoting adaptor protein; Short=ADAP	22.3	751	10%	731	100%
AAB59537.1	complement component C4A [Homo sapiens]	22.3	1651	23%	731	100%
AAC61607.1	immunoglobulin variable region used by the ITC52 heavy chain (subgroup VH5) (anti-cytomeglovirus glycoprotein B (AD-1 epitope)) [Homo sapiens]	22.3	124	1%	731	100%
AAA51855.1	complement component C4A [Homo sapiens]	22.3	1675	24%	731	100%
AAD45899.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	107	1%	731	100%
NP_857592.1	chemokine-like factor isoform d [Homo sapiens]	22.3	248	3%	731	100%
ABB01006.1	heat shock protein 60 [Homo sapiens]	22.3	419	6%	731	100%
AAY57161.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57166.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	213	3%	731	100%
AAY57159.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57162.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57175.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	232	3%	731	100%
AAY57163.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57127.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	123	1%	731	100%
AAY57158.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	127	1%	731	80%
AAY57164.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	217	3%	731	100%
AAY57121.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57064.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57060.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	180	2%	731	100%
AAY57062.1	immunoglobulin heavy chain variable region [Homo sapiens]	22.3	246	3%	731	100%
AAY33424.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	22.3	180	3%	731	83%
AAY33292.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	22.3	197	2%	731	100%
AAW65983.1	HECTD1 [Homo sapiens]	22.3	1240	17%	731	100%
NP_116759.2	caspase-10 isoform d preproprotein [Homo sapiens]	22.3	604	8%	731	100%
AAZ80417.1	mitochondrial anti-viral signaling protein [Homo sapiens]	22.3	531	7%	731	100%
NP_758525.1	interleukin-25 isoform 2 precursor [Homo sapiens]	22.3	218	3%	731	100%
Q92619.2	RecName: Full=Minor histocompatibility protein HA-1; Contains: RecName: Full=Minor histocompatibility antigen HA-1; Short=mHag HA-1	22.3	1138	16%	731	100%
P0C0L5.1	RecName: Full=Complement C4-B; AltName: Full=Basic complement C4; AltName: Full=C3 and PZP-like alpha-2-macroglobulin domain-containing protein 3; Contains: RecName: Full=Complement C4 beta chain; Contains: RecName: Full=Complement C4-B alpha chain; Contains: RecName: Full=C4a anaphylatoxin; Contains: RecName: Full=C4b-B; Contains: RecName: Full=C4d-B; Contains: RecName: Full=Complement C4 gamma chain; Flags: Precursor	22.3	1671	24%	731	100%
BAE06071.1	C4A variant protein [Homo sapiens]	22.3	1670	24%	731	100%
Q04446.2	RecName: Full=1,4-alpha-glucan-branching enzyme; AltName: Full=Glycogen-branching enzyme; AltName: Full=Brancher enzyme	22.3	589	9%	731	100%
1YGR_A	Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp Cd45 >pdb\|1YGR\|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp Cd45 >pdb\|1YGU\|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of Rptp Cd45 With A Ptyr Peptide >pdb\|1YGU\|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of Rptp Cd45 With A Ptyr Peptide	22.3	600	7%	731	100%
1TAZ_A	Chain A, Catalytic Domain Of Human Phosphodiesterase 1b	22.3	407	5%	731	83%
1IGA_A	Chain A, Model Of Human Iga1 Determined By Solution Scattering Curve- Fitting And Homology Modelling >pdb\|1IGA\|B Chain B, Model Of Human Iga1 Determined By Solution Scattering Curve- Fitting And Homology Modelling >pdb\|2ESG\|A Chain A, Solution Structure Of The Complex Between Immunoglobulin Iga1 And Human Serum Albumin >pdb\|2ESG\|B Chain B, Solution Structure Of The Complex Between Immunoglobulin Iga1 And Human Serum Albumin >pdb\|2QTJ\|A Chain A, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|2QTJ\|B Chain B, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|2QTJ\|C Chain C, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|2QTJ\|D Chain D, Solution Structure Of Human Dimeric Immunoglobulin A >pdb\|3CHN\|A Chain A, Solution Structure Of Human Secretory Iga1 >pdb\|3CHN\|B Chain B, Solution Structure Of Human Secretory Iga1 >pdb\|3CHN\|D Chain D, Solution Structure Of Human Secretory Iga1 >pdb\|3CHN\|C Chain C, Solution Structure Of Human Secretory Iga1	22.3	596	8%	731	100%
P60508.1	RecName: Full=HERV-FRD_6p24.1 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=HERV-FRD; AltName: Full=Syncytin-2; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor	22.3	760	9%	731	100%
1OQD_K	Chain K, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|L Chain L, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|M Chain M, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|N Chain N, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|O Chain O, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|P Chain P, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|Q Chain Q, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|R Chain R, Crystal Structure Of Stall-1 And Bcma	22.3	76.8	0%	731	100%
CAD88682.1	immunoglobulin heavy chain [Homo sapiens]	22.3	164	2%	731	100%
CAD88655.1	immunoglobulin heavy chain [Homo sapiens]	22.3	90.1	1%	731	100%
CAD88671.1	immunoglobulin heavy chain [Homo sapiens]	22.3	74.7	1%	731	80%
P60510.1	RecName: Full=Serine/threonine-protein phosphatase 4 catalytic subunit; Short=PP4C; Short=Pp4; AltName: Full=Protein phosphatase X; Short=PP-X	22.3	244	3%	731	100%
NP_001026850.1	runt-related transcription factor 3 isoform 1 [Homo sapiens]	22.3	472	6%	731	100%
P02708.2	RecName: Full=Acetylcholine receptor subunit alpha; Flags: Precursor	22.3	538	8%	731	100%
CAC03928.1	T-cell receptor beta chain [Homo sapiens]	22.3	41.6	0%	731	100%
CAC03836.1	T-cell receptor beta chain [Homo sapiens]	22.3	57.9	0%	731	100%
NP_003630.1	NF-kappa-B essential modulator isoform a [Homo sapiens] >ref\|NP_001093327.1\| NF-kappa-B essential modulator isoform a [Homo sapiens] >sp\|Q9Y6K9.2\|NEMO_HUMAN RecName: Full=NF-kappa-B essential modulator; Short=NEMO; AltName: Full=NF-kappa-B essential modifier; AltName: Full=Inhibitor of nuclear factor kappa-B kinase subunit gamma; Short=I-kappa-B kinase subunit gamma; Short=IkB kinase subunit gamma; Short=IKK-gamma; Short=IKKG; AltName: Full=IkB kinase-associated protein 1; Short=IKKAP1; AltName: Full=FIP-3	22.3	397	5%	731	100%
1JE6_A	Chain A, Structure Of The Mhc Class I Homolog Micb	22.3	270	4%	731	80%
Q08881.1	RecName: Full=Tyrosine-protein kinase ITK/TSK; AltName: Full=T-cell-specific kinase; AltName: Full=Tyrosine-protein kinase Lyk; AltName: Full=Kinase EMT	22.3	492	6%	731	100%
2HRL_A	Chain A, Siglec-7 In Complex With Gt1b	22.3	88.0	1%	731	85%
Q06643.1	RecName: Full=Lymphotoxin-beta; Short=LT-beta; AltName: Full=Tumor necrosis factor C; Short=TNF-C; AltName: Full=Tumor necrosis factor ligand superfamily member 3	22.3	237	3%	731	85%
NP_002147.2	60 kDa heat shock protein, mitochondrial [Homo sapiens] >ref\|NP_955472.1\| 60 kDa heat shock protein, mitochondrial [Homo sapiens]	22.3	419	6%	731	100%
1HZF_A	Chain A, C4adg Fragment Of Human Complement Factor C4a	22.3	486	6%	731	100%
CAB59389.1	T cell receptor beta chain variable region [Homo sapiens]	22.3	39.0	0%	731	100%
NP_055464.1	scaffold attachment factor B2 [Homo sapiens]	22.3	764	9%	731	100%
CAC03957.1	T-cell receptor beta chain [Homo sapiens]	22.3	57.1	0%	731	100%
Q8WXW3.2	RecName: Full=Progesterone-induced-blocking factor 1	22.3	816	11%	731	100%
P0C0L4.1	RecName: Full=Complement C4-A; AltName: Full=Acidic complement C4; AltName: Full=C3 and PZP-like alpha-2-macroglobulin domain-containing protein 2; Contains: RecName: Full=Complement C4 beta chain; Contains: RecName: Full=Complement C4-A alpha chain; Contains: RecName: Full=C4a anaphylatoxin; Contains: RecName: Full=C4b-A; Contains: RecName: Full=C4d-A; Contains: RecName: Full=Complement C4 gamma chain; Flags: Precursor	22.3	1654	24%	731	100%
CAC03856.1	T-cell receptor beta chain [Homo sapiens]	22.3	41.6	0%	731	100%
CAC20453.1	immunoglobulin heavy chain constant region alpha 1 [Homo sapiens]	22.3	497	6%	731	100%
P48594.2	RecName: Full=Serpin B4; AltName: Full=Squamous cell carcinoma antigen 2; Short=SCCA-2; AltName: Full=Leupin; AltName: Full=Peptidase inhibitor 11; Short=PI-11	22.3	474	5%	731	100%
1FOE_B	Chain B, Crystal Structure Of Rac1 In Complex With The Guanine Nucleotide Exchange Region Of Tiam1 >pdb\|1FOE\|D Chain D, Crystal Structure Of Rac1 In Complex With The Guanine Nucleotide Exchange Region Of Tiam1 >pdb\|1FOE\|F Chain F, Crystal Structure Of Rac1 In Complex With The Guanine Nucleotide Exchange Region Of Tiam1 >pdb\|1FOE\|H Chain H, Crystal Structure Of Rac1 In Complex With The Guanine Nucleotide Exchange Region Of Tiam1	22.3	163	1%	731	100%
NP_058647.1	chemokine-like factor isoform a [Homo sapiens]	22.3	258	3%	731	100%
NP_005593.2	claudin-11 isoform 1 [Homo sapiens]	22.3	202	2%	731	100%
NP_667344.1	transcriptional repressor NF-X1 isoform 2 [Homo sapiens]	22.3	1082	13%	731	100%
CAC03960.1	T-cell receptor beta chain [Homo sapiens]	22.3	41.6	0%	731	100%
CAC28011.1	immunoglobulin lambda light chain variable region [Homo sapiens]	22.3	179	3%	731	100%
CAC03844.1	T-cell receptor beta chain [Homo sapiens]	22.3	41.6	0%	731	100%
O75462.1	RecName: Full=Cytokine receptor-like factor 1; AltName: Full=Cytokine-like factor 1; Short=CLF-1; AltName: Full=ZcytoR5; Flags: Precursor	22.3	375	5%	731	100%
NP_004341.1	runt-related transcription factor 3 isoform 2 [Homo sapiens]	22.3	430	5%	731	100%
CAC20458.1	immunoglobulin heavy chain constant region mu [Homo sapiens]	22.3	453	6%	731	100%
NP_065688.1	fibroblast growth factor 22 precursor [Homo sapiens]	22.3	340	4%	731	83%
Q02556.2	RecName: Full=Interferon regulatory factor 8; Short=IRF-8; AltName: Full=Interferon consensus sequence-binding protein; Short=ICSBP	22.3	300	4%	731	85%
NP_071732.1	ras-related protein Rab-38 [Homo sapiens]	22.3	276	3%	731	100%
P29508.2	RecName: Full=Serpin B3; AltName: Full=Squamous cell carcinoma antigen 1; Short=SCCA-1; AltName: Full=Protein T4-A	22.3	430	5%	731	100%
CAC03862.1	T-cell receptor beta chain [Homo sapiens]	22.3	41.6	0%	731	100%
NP_001755.1	T-cell surface glycoprotein CD1b precursor [Homo sapiens]	22.3	403	5%	731	100%
NP_005479.1	target of Myb protein 1 isoform 1 [Homo sapiens]	22.3	497	7%	731	100%
NP_000439.1	V(D)J recombination-activating protein 1 [Homo sapiens] >sp\|P15918.1\|RAG1_HUMAN RecName: Full=V(D)J recombination-activating protein 1; Short=RAG-1; AltName: Full=RING finger protein 74; Includes: RecName: Full=Endonuclease RAG1; Includes: RecName: Full=E3 ubiquitin-protein ligase RAG1	22.3	1073	13%	731	100%
Q7Z434.2	RecName: Full=Mitochondrial antiviral-signaling protein; AltName: Full=Interferon beta promoter stimulator protein 1; Short=IPS-1; AltName: Full=Virus-induced-signaling adapter; AltName: Full=CARD adapter inducing interferon beta; Short=Cardif; AltName: Full=Putative NF-kappa-B-activating protein 031N	22.3	530	7%	731	100%
NP_068585.1	transcription regulator protein BACH2 [Homo sapiens] >ref\|NP_001164265.1\| transcription regulator protein BACH2 [Homo sapiens]	22.3	902	12%	731	100%
CAA66154.1	immunoglobulin heavy chain [Homo sapiens]	22.3	111	2%	731	71%
NP_001078.2	angio-associated migratory cell protein [Homo sapiens]	22.3	376	4%	731	100%
P04062.3	RecName: Full=Glucosylceramidase; AltName: Full=Beta-glucocerebrosidase; AltName: Full=Acid beta-glucosidase; AltName: Full=D-glucosyl-N-acylsphingosine glucohydrolase; AltName: Full=Alglucerase; AltName: Full=Imiglucerase; Flags: Precursor	22.3	406	6%	731	100%
CAB46467.1	immunoglobulin light chain variable region [Homo sapiens]	22.3	91.0	1%	731	100%
NP_001450.2	SL cytokine precursor [Homo sapiens]	22.3	315	5%	731	100%
NP_002160.1	interferon alpha-5 precursor [Homo sapiens]	22.3	191	2%	731	100%
NP_116756.2	caspase-10 isoform b preproprotein [Homo sapiens] >sp\|Q92851.3\|CASPA_HUMAN RecName: Full=Caspase-10; Short=CASP-10; AltName: Full=ICE-like apoptotic protease 4; AltName: Full=Apoptotic protease Mch-4; AltName: Full=FAS-associated death domain protein interleukin-1B-converting enzyme 2; Short=FLICE2; Contains: RecName: Full=Caspase-10 subunit p23/17; Contains: RecName: Full=Caspase-10 subunit p12; Flags: Precursor	22.3	559	7%	731	100%
NP_055417.1	phosphoinositide 3-kinase regulatory subunit 4 [Homo sapiens]	22.3	1615	20%	731	100%
NP_002451.2	interferon regulatory factor 4 [Homo sapiens] >sp\|Q15306.1\|IRF4_HUMAN RecName: Full=Interferon regulatory factor 4; Short=IRF-4; AltName: Full=Lymphocyte-specific interferon regulatory factor; Short=LSIRF; AltName: Full=NF-EM5; AltName: Full=Multiple myeloma oncogene 1	22.3	404	5%	731	100%
1NKO_A	Chain A, Energetic And Structural Basis Of Sialylated Oligosaccharide Recognition By The Natural Killer Cell Inhibitory Receptor P75AIRM1 OR SIGLEC-7	22.3	105	1%	731	85%
NP_149103.1	RNA processing factor [Homo sapiens] >sp\|Q96EU6.1\|CF153_HUMAN RecName: Full=UPF0399 protein C6orf153	22.3	243	4%	731	100%
CAC28890.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	22.3	196	3%	731	100%
Q9Y286.1	RecName: Full=Sialic acid-binding Ig-like lectin 7; Short=Siglec-7; AltName: Full=QA79 membrane protein; AltName: Full=Adhesion inhibitory receptor molecule 1; Short=AIRM-1; AltName: Full=p75; AltName: Full=D-siglec; AltName: Full=CDw328; AltName: CD_antigen=CD328; Flags: Precursor	22.3	364	4%	731	85%
NP_057723.1	tumor necrosis factor receptor superfamily member 12A [Homo sapiens]	22.3	156	2%	731	83%
NP_005850.1	transcriptional activator protein Pur-alpha [Homo sapiens]	22.3	261	3%	731	100%
NP_055129.2	probable ATP-dependent RNA helicase DDX58 [Homo sapiens] >sp\|O95786.2\|DDX58_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX58; AltName: Full=DEAD box protein 58; AltName: Full=Retinoic acid-inducible gene 1 protein; Short=RIG-1; AltName: Full=Retinoic acid-inducible gene I protein; Short=RIG-I	22.3	887	14%	731	100%
NP_006728.2	killer cell immunoglobulin-like receptor 3DL2 precursor [Homo sapiens]	22.3	699	10%	731	100%
Q9NQS5.1	RecName: Full=G-protein coupled receptor 84; AltName: Full=Inflammation-related G-protein coupled receptor EX33	22.3	407	6%	731	100%
Q29983.1	RecName: Full=MHC class I polypeptide-related sequence A; Short=MIC-A; Flags: Precursor	22.3	376	5%	731	100%
NP_001701.2	complement factor B preproprotein [Homo sapiens]	22.3	656	7%	731	100%
NP_000052.1	tyrosine-protein kinase BTK [Homo sapiens]	22.3	593	9%	731	100%
1ZVO_C	Chain C, Semi-Extended Solution Structure Of Human Myeloma Immunoglobulin D Determined By Constrained X-Ray Scattering >pdb\|1ZVO\|D Chain D, Semi-Extended Solution Structure Of Human Myeloma Immunoglobulin D Determined By Constrained X-Ray Scattering	22.3	505	7%	731	100%
NP_002629.1	elafin preproprotein [Homo sapiens]	22.3	142	2%	731	100%
CAC03847.1	T-cell receptor beta chain [Homo sapiens]	22.3	59.2	0%	731	100%
Q9NVU0.1	RecName: Full=DNA-directed RNA polymerase III subunit RPC5; Short=RNA polymerase III subunit C5; AltName: Full=DNA-directed RNA polymerase III 80 kDa polypeptide	22.3	864	12%	731	100%
CAC03852.1	T-cell receptor beta chain [Homo sapiens]	22.3	41.6	0%	731	100%
NP_073626.1	interleukin-25 isoform 1 precursor [Homo sapiens] >sp\|Q9H293.1\|IL25_HUMAN RecName: Full=Interleukin-25; Short=IL-25; AltName: Full=Interleukin-17E; Short=IL-17E; Flags: Precursor	22.3	267	3%	731	100%
NP_694968.1	GTPase IMAP family member 7 [Homo sapiens] >gb\|EAL24481.1\| immune associated nucleotide [Homo sapiens]	22.3	351	4%	731	100%
O60896.1	RecName: Full=Receptor activity-modifying protein 3; AltName: Full=Calcitonin-receptor-like receptor activity-modifying protein 3; Short=CRLR activity-modifying protein 3; Flags: Precursor	22.3	240	3%	731	100%
CAC20456.1	immunoglobulin heavy chain constant region gamma 3 [Homo sapiens]	21.4	488	6%	1316	100%
AAG00911.1	recombinant IgG3 heavy chain [Homo sapiens]	21.4	415	5%	1316	100%
NP_114032.2	heterogeneous nuclear ribonucleoprotein U isoform a [Homo sapiens]	21.4	653	8%	823	100%
NP_004492.2	heterogeneous nuclear ribonucleoprotein U isoform b [Homo sapiens]	21.4	653	8%	830	100%
Q9UHD2.1	RecName: Full=Serine/threonine-protein kinase TBK1; AltName: Full=TANK-binding kinase 1; AltName: Full=T2K; AltName: Full=NF-kappa-B-activating kinase	21.0	734	9%	856	100%
Q9NYK1.1	RecName: Full=Toll-like receptor 7; Flags: Precursor	21.8	1063	14%	981	100%
Q7Z6A9.3	RecName: Full=B- and T-lymphocyte attenuator; AltName: Full=B- and T-lymphocyte-associated protein; AltName: CD_antigen=CD272; Flags: Precursor	21.8	425	5%	981	100%
ACN63314.1	B cell antibody heavy chain variable region [Homo sapiens]	21.8	102	1%	981	80%
ACN63303.1	B cell antibody heavy chain variable region [Homo sapiens]	21.8	160	2%	981	100%
ACN63300.1	B cell antibody heavy chain variable region [Homo sapiens]	21.8	139	2%	981	100%
ACN63293.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63295.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63298.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63311.1\| B cell antibody heavy chain variable region [Homo sapiens]	21.8	158	2%	981	100%
ACN63283.1	B cell antibody heavy chain variable region [Homo sapiens]	21.8	104	1%	981	100%
ACN63205.1	B cell antibody heavy chain variable region [Homo sapiens]	21.8	176	2%	981	100%
NP_001155894.1	protein C-ets-1 isoform 3 [Homo sapiens]	21.8	193	2%	981	100%
NP_001138727.1	NF-kappa-B essential modulator isoform c [Homo sapiens]	21.8	265	4%	981	100%
2W9E_A	Chain A, Structure Of Icsm 18 (Anti-Prp Therapeutic Antibody) Fab Fragment Complexed With Human Prp Fragment 119-231	21.8	73.4	1%	981	71%
2VWE_A	Chain A, Crystal Structure Of Vascular Endothelial Growth Factor-B In Complex With A Neutralizing Antibody Fab Fragment >pdb\|2VWE\|B Chain B, Crystal Structure Of Vascular Endothelial Growth Factor-B In Complex With A Neutralizing Antibody Fab Fragment	21.8	208	2%	981	100%
CAR62961.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	95.2	1%	981	100%
CAR62907.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.8	128	1%	981	100%
CAR62859.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	187	2%	981	100%
CAR62629.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	142	2%	981	100%
CAR62594.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.8	91.0	1%	981	80%
CAR62546.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	105	1%	981	100%
Q496F6.2	RecName: Full=CMRF35-like molecule 2; Short=CLM-2; AltName: Full=CMRF35-A5; AltName: Full=Immune receptor expressed on myeloid cells 2; Short=IREM-2; AltName: Full=Polymeric immunoglobulin receptor 2; Short=Poly-Ig receptor 2; Short=PIgR-2; Short=PIgR2; AltName: Full=CD300 antigen-like family member E; AltName: CD_antigen=CD300e; Flags: Precursor	21.8	350	4%	981	100%
NP_001137467.1	leupaxin isoform 1 [Homo sapiens]	21.8	291	3%	981	100%
A6NK06.1	RecName: Full=Immune-responsive gene 1 protein homolog	21.8	517	8%	981	100%
NP_001129120.1	receptor-type tyrosine-protein phosphatase kappa isoform a [Homo sapiens]	21.8	1182	15%	981	100%
2JPH_A	Chain A, Nmr Solution Structure Of The Rho Gtpase Binding Domain Of Human Plexin-B1	21.8	86.3	1%	981	80%
2Z80_A	Chain A, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide >pdb\|2Z80\|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By Binding Of A Tri-Acylated Lipopeptide	21.8	442	6%	981	100%
NP_940682.2	E3 ubiquitin-protein ligase NEDD4 isoform 2 [Homo sapiens]	21.8	1198	14%	981	100%
NP_006145.2	E3 ubiquitin-protein ligase NEDD4 isoform 1 [Homo sapiens]	21.8	947	12%	981	100%
ABR37256.1	T-cell receptor beta chain [Homo sapiens]	21.8	106	1%	981	85%
2H32_A	Chain A, Crystal Structure Of The Pre-B Cell Receptor	21.8	141	2%	981	83%
NP_000876.3	integrin alpha-4 precursor [Homo sapiens]	21.8	968	12%	981	100%
NP_006838.3	leukocyte immunoglobulin-like receptor subfamily B member 4 isoform 1 [Homo sapiens]	21.8	671	8%	981	100%
NP_001074239.1	killer cell immunoglobulin-like receptor 2DL4 isoform c [Homo sapiens]	21.8	360	4%	981	100%
NP_115528.4	PML-RARA-regulated adapter molecule 1 [Homo sapiens]	21.8	711	9%	981	100%
NP_006557.2	CD226 antigen precursor [Homo sapiens]	21.8	431	7%	981	100%
2IF7_A	Chain A, Crystal Structure Of Ntb-A >pdb\|2IF7\|B Chain B, Crystal Structure Of Ntb-A >pdb\|2IF7\|C Chain C, Crystal Structure Of Ntb-A >pdb\|2IF7\|D Chain D, Crystal Structure Of Ntb-A	21.8	301	3%	981	100%
NP_065139.2	CD177 antigen precursor [Homo sapiens]	21.8	345	4%	981	100%
NP_001074241.1	killer cell immunoglobulin-like receptor 2DL4 isoform b [Homo sapiens]	21.8	315	4%	981	100%
O15318.2	RecName: Full=DNA-directed RNA polymerase III subunit RPC7; Short=RNA polymerase III subunit C7; AltName: Full=DNA-directed RNA polymerase III subunit G; AltName: Full=RNA polymerase III 32 kDa subunit; Short=RPC32	21.8	104	1%	981	83%
NP_919429.2	C-type lectin domain family 4 member A isoform 3 [Homo sapiens]	21.8	316	3%	981	100%
ABG38463.1	immunglobulin heavy chain variable region [Homo sapiens]	21.8	99.3	1%	981	100%
CAJ14086.1	T-cell receptor beta chain [Homo sapiens]	21.8	21.8	0%	981	85%
CAJ14062.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14083.1\| T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14089.1\| T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14090.1\| T-cell receptor beta chain [Homo sapiens]	21.8	21.8	0%	981	85%
CAJ14092.1	T-cell receptor beta chain [Homo sapiens]	21.8	21.8	0%	981	85%
CAJ14080.1	T-cell receptor beta chain [Homo sapiens]	21.8	21.8	0%	981	85%
2ESV_D	Chain D, Structure Of The Hla-E-VmaprtlilKK50.4 TCR COMPLEX	21.8	228	3%	981	100%
Q8N6Q3.2	RecName: Full=CD177 antigen; AltName: Full=Polycythemia rubra vera protein 1; Short=PRV-1; AltName: Full=NB1 glycoprotein; Short=NB1 GP; AltName: Full=Human neutrophil alloantigen 2a; Short=HNA-2a; AltName: CD_antigen=CD177; Flags: Precursor	21.8	310	4%	981	100%
NP_001180231.1	semaphorin-4A isoform 2 [Homo sapiens]	21.8	684	9%	981	100%
NP_036519.2	protein-arginine deiminase type-4 [Homo sapiens]	21.8	595	10%	981	100%
NP_001137292.1	protein C-ets-1 isoform 1 [Homo sapiens]	21.8	414	4%	981	100%
NP_612405.2	E3 ubiquitin-protein ligase MARCH9 [Homo sapiens] >sp\|Q86YJ5.2\|MARH9_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH9; AltName: Full=Membrane-associated RING finger protein 9; AltName: Full=Membrane-associated RING-CH protein IX; Short=MARCH-IX; AltName: Full=RING finger protein 179	21.8	382	4%	981	85%
NP_002552.2	P2X purinoceptor 5 isoform A [Homo sapiens] >sp\|Q93086.4\|P2RX5_HUMAN RecName: Full=P2X purinoceptor 5; Short=P2X5; AltName: Full=ATP receptor; AltName: Full=Purinergic receptor	21.8	323	4%	981	83%
NP_919432.1	C-type lectin domain family 4 member A isoform 2 [Homo sapiens]	21.8	407	4%	981	100%
NP_002835.2	receptor-type tyrosine-protein phosphatase kappa isoform b [Homo sapiens]	21.8	1163	14%	981	100%
NP_932174.1	TSC22 domain family protein 3 isoform 1 [Homo sapiens]	21.8	224	3%	981	100%
NP_085128.2	methylcytosine dioxygenase TET1 [Homo sapiens]	21.8	1992	24%	981	100%
NP_003893.2	far upstream element-binding protein 1 [Homo sapiens]	21.8	499	7%	981	85%
NP_031372.2	opioid growth factor receptor [Homo sapiens]	21.8	706	8%	981	100%
NP_006490.3	galectin-8 isoform a [Homo sapiens] >ref\|NP_963839.1\| galectin-8 isoform a [Homo sapiens]	21.8	217	3%	981	100%
NP_001008503.2	mu-type opioid receptor isoform MOR-1O [Homo sapiens]	21.8	646	10%	981	100%
NP_001005416.1	E3 ubiquitin-protein ligase MARCH2 isoform 2 [Homo sapiens]	21.8	207	3%	981	100%
NP_852114.1	CMRF35-like molecule 2 precursor [Homo sapiens] >gb\|AAP42154.1\|AF395839_1 immune receptor expressed on myeloid cells 2 [Homo sapiens]	21.8	368	4%	981	100%
NP_536340.1	septin-4 isoform 2 [Homo sapiens]	21.8	230	4%	981	100%
NP_005103.2	WD repeat-containing protein 1 isoform 2 [Homo sapiens]	21.8	200	3%	981	100%
NP_001153175.1	four and a half LIM domains protein 1 isoform 4 [Homo sapiens]	21.8	139	1%	981	100%
AAB52594.1	immunoglobulin heavy chain [Homo sapiens]	21.8	103	1%	981	100%
NP_064647.1	beta-arrestin-1 isoform B [Homo sapiens]	21.8	393	6%	981	100%
AAB52593.1	immunoglobulin heavy chain [Homo sapiens]	21.8	121	1%	981	100%
AAA36072.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	21.8	239	3%	981	100%
AAC51931.1	ATP receptor subunit [Homo sapiens]	21.8	323	4%	981	83%
AAL50779.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	127	1%	981	100%
AAB52596.1	immunoglobulin heavy chain [Homo sapiens]	21.8	118	1%	981	100%
AAC37599.1	protein tyrosine phosphatase [Homo sapiens]	21.8	1203	15%	981	100%
AAB52595.1	immunoglobulin heavy chain [Homo sapiens]	21.8	140	2%	981	100%
NP_671513.1	sigma non-opioid intracellular receptor 1 isoform 2 [Homo sapiens]	21.8	222	3%	981	83%
NP_536341.1	septin-4 isoform 3 [Homo sapiens]	21.8	488	7%	981	100%
AAB52597.1	immunoglobulin heavy chain [Homo sapiens]	21.8	140	1%	981	100%
AAD45897.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	157	2%	981	80%
AAB52591.1	immunoglobulin heavy chain [Homo sapiens]	21.8	121	1%	981	100%
AAD45898.3	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	142	1%	981	100%
NP_001180250.1	inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform 3 [Homo sapiens]	21.8	779	10%	981	100%
AAY57129.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	189	2%	981	100%
AAY57069.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	139	2%	981	100%
AAW65984.1	M-phase phosphoprotein 1 [Homo sapiens]	21.8	709	9%	981	100%
NP_919430.1	C-type lectin domain family 4 member A isoform 4 [Homo sapiens]	21.8	300	3%	981	100%
NP_778255.1	P2X purinoceptor 5 isoform B [Homo sapiens]	21.8	323	4%	981	83%
NP_003206.2	tyrosine-protein kinase Tec [Homo sapiens]	21.8	667	9%	981	100%
NP_778256.1	P2X purinoceptor 5 isoform C [Homo sapiens]	21.8	177	2%	981	83%
NP_660341.2	DNA dC->dU-editing enzyme APOBEC-3F isoform a [Homo sapiens]	21.8	481	5%	981	100%
NP_663634.2	interleukin-27 subunit alpha precursor [Homo sapiens] >sp\|Q8NEV9.2\|IL27A_HUMAN RecName: Full=Interleukin-27 subunit alpha; Short=IL-27 subunit alpha; Short=IL-27-A; Short=IL27-A; AltName: Full=p28; Flags: Precursor	21.8	490	8%	981	83%
AAB50739.1	T-cell receptor V3J2S5 beta chain [human, CD4- large granular lymphocytes, patient PGSC P1 isolate, Peptide Partial, 20 aa]	21.8	21.8	0%	981	85%
NP_001091980.1	protein pellino homolog 3 isoform 2 [Homo sapiens]	21.8	413	4%	981	100%
1YY8_B	Chain B, Crystal Structure Of The Fab Fragment From The Monoclonal Antibody CetuximabERBITUXIMC-C225 >pdb\|1YY8\|D Chain D, Crystal Structure Of The Fab Fragment From The Monoclonal Antibody CetuximabERBITUXIMC-C225 >pdb\|1YY9\|D Chain D, Structure Of The Extracellular Domain Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of CetuximabERBITUXIMC-C225	21.8	210	3%	981	83%
1YY8_A	Chain A, Crystal Structure Of The Fab Fragment From The Monoclonal Antibody CetuximabERBITUXIMC-C225 >pdb\|1YY8\|C Chain C, Crystal Structure Of The Fab Fragment From The Monoclonal Antibody CetuximabERBITUXIMC-C225 >pdb\|1YY9\|C Chain C, Structure Of The Extracellular Domain Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of CetuximabERBITUXIMC-C225	21.8	208	3%	981	100%
NP_001035370.1	CD83 antigen isoform b [Homo sapiens]	21.8	328	5%	981	100%
1XZ0_A	Chain A, Crystal Structure Of Cd1a In Complex With A Synthetic Mycobactin Lipopeptide >pdb\|1XZ0\|C Chain C, Crystal Structure Of Cd1a In Complex With A Synthetic Mycobactin Lipopeptide	21.8	314	4%	981	100%
NP_001153171.1	four and a half LIM domains protein 1 isoform 5 [Homo sapiens]	21.8	179	2%	981	100%
NP_001153173.1	four and a half LIM domains protein 1 isoform 3 [Homo sapiens]	21.8	195	2%	981	100%
CAE54373.1	immunoglobulin heavy chain [Homo sapiens]	21.8	92.3	1%	981	75%
P14091.2	RecName: Full=Cathepsin E; Contains: RecName: Full=Cathepsin E form I; Contains: RecName: Full=Cathepsin E form II; Flags: Precursor	21.8	450	7%	981	100%
NP_055892.2	sterile alpha and TIR motif-containing protein 1 [Homo sapiens] >sp\|Q6SZW1.1\|SARM1_HUMAN RecName: Full=Sterile alpha and TIR motif-containing protein 1; AltName: Full=Sterile alpha and Armadillo repeat protein; AltName: Full=Tir-1 homolog; AltName: Full=Sterile alpha motif domain-containing protein 2; Short=SAM domain-containing protein 2	21.8	865	11%	981	100%
Q6EIG7.1	RecName: Full=C-type lectin domain family 6 member A; AltName: Full=Dendritic cell-associated C-type lectin 2; Short=DC-associated C-type lectin 2; Short=Dectin-2; AltName: Full=C-type lectin superfamily member 10	21.8	277	4%	981	100%
1ONQ_A	Chain A, Crystal Structure Of Cd1a In Complex With A Sulfatide >pdb\|1ONQ\|C Chain C, Crystal Structure Of Cd1a In Complex With A Sulfatide	21.8	314	4%	981	100%
NP_001003693.1	lymphocyte antigen 6 complex locus protein G6f precursor [Homo sapiens]	21.8	386	5%	981	100%
CAD88676.1	immunoglobulin heavy chain [Homo sapiens]	21.8	249	3%	981	100%
NP_000529.1	regulatory factor X-associated protein [Homo sapiens]	21.8	277	3%	981	100%
O60895.2	RecName: Full=Receptor activity-modifying protein 2; AltName: Full=Calcitonin-receptor-like receptor activity-modifying protein 2; Short=CRLR activity-modifying protein 2; Flags: Precursor	21.8	151	1%	981	100%
1L7I_H	Chain H, Crystal Structure Of The Anti-Erbb2 Fab2c4	21.8	207	3%	981	83%
NP_001440.2	four and a half LIM domains protein 1 isoform 2 [Homo sapiens] >ref\|NP_001153172.1\| four and a half LIM domains protein 1 isoform 2 [Homo sapiens] >ref\|NP_001153176.1\| four and a half LIM domains protein 1 isoform 2 [Homo sapiens] >ref\|NP_001161291.1\| four and a half LIM domains protein 1 isoform 2 [Homo sapiens]	21.8	179	2%	981	100%
NP_004565.1	septin-4 isoform 1 [Homo sapiens]	21.8	504	7%	981	100%
1FS2_A	Chain A, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FS2\|C Chain C, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex	21.8	297	4%	981	100%
Q8NHJ6.2	RecName: Full=Leukocyte immunoglobulin-like receptor subfamily B member 4; AltName: Full=Leukocyte immunoglobulin-like receptor 5; Short=LIR-5; AltName: Full=Immunoglobulin-like transcript 3; Short=ILT-3; AltName: Full=Monocyte inhibitory receptor HM18; AltName: Full=CD85 antigen-like family member K; AltName: CD_antigen=CD85k; Flags: Precursor	21.8	653	8%	981	100%
Q15762.1	RecName: Full=CD226 antigen; AltName: Full=DNAX accessory molecule 1; Short=DNAM-1; AltName: CD_antigen=CD226; Flags: Precursor	21.8	408	6%	981	100%
NP_066282.1	interferon alpha-6 precursor [Homo sapiens]	21.8	300	3%	981	100%
NP_006691.1	TRAF-type zinc finger domain-containing protein 1 [Homo sapiens] >ref\|NP_001137378.1\| TRAF-type zinc finger domain-containing protein 1 [Homo sapiens] >sp\|O14545.1\|TRAD1_HUMAN RecName: Full=TRAF-type zinc finger domain-containing protein 1; AltName: Full=Protein FLN29	21.8	606	7%	981	100%
Q9BZM5.1	RecName: Full=NKG2D ligand 2; Short=NKG2DL2; Short=N2DL-2; AltName: Full=UL16-binding protein 2; AltName: Full=ALCAN-alpha; AltName: Full=Retinoic acid early transcript 1H; Flags: Precursor	21.8	410	5%	981	100%
NP_002517.1	5'-nucleotidase precursor [Homo sapiens]	21.8	553	9%	981	100%
NP_071762.2	semaphorin-4A isoform 1 precursor [Homo sapiens] >ref\|NP_001180229.1\| semaphorin-4A isoform 1 precursor [Homo sapiens] >ref\|NP_001180230.1\| semaphorin-4A isoform 1 precursor [Homo sapiens]	21.8	911	12%	981	100%
CAC03766.1	T-cell receptor beta chain [Homo sapiens]	21.8	58.8	0%	981	85%
1QM0_A	Chain A, Human Prion Protein Fragment 90-230 >pdb\|1QM1\|A Chain A, Human Prion Protein Fragment 90-230	21.8	123	1%	981	83%
NP_000261.2	purine nucleoside phosphorylase [Homo sapiens]	21.8	219	2%	981	100%
CAC03889.1	T-cell receptor beta chain [Homo sapiens]	21.8	70.4	0%	981	85%
NP_001153174.1	four and a half LIM domains protein 1 isoform 1 [Homo sapiens]	21.8	172	2%	981	100%
NP_970615.2	acidic mammalian chitinase isoform c [Homo sapiens] >sp\|Q9BZP6.1\|CHIA_HUMAN RecName: Full=Acidic mammalian chitinase; Short=AMCase; AltName: Full=Lung-specific protein TSA1902; Flags: Precursor	21.8	404	5%	981	100%
P19174.1	RecName: Full=1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-1; AltName: Full=Phosphoinositide phospholipase C-gamma-1; AltName: Full=Phospholipase C-gamma-1; Short=PLC-gamma-1; AltName: Full=Phospholipase C-II; Short=PLC-II; AltName: Full=PLC-148	21.8	1239	17%	981	100%
CAC44459.1	NB1 Glycoprotein [Homo sapiens]	21.8	348	4%	981	100%
NP_001272.2	tubulin-folding cofactor B [Homo sapiens]	21.8	290	4%	981	100%
NP_000630.1	tumor necrosis factor ligand superfamily member 6 [Homo sapiens]	21.8	444	6%	981	100%
CAC48321.1	T-cell receptor beta chain [Homo sapiens]	21.8	103	1%	981	83%
NP_001074907.1	leukocyte immunoglobulin-like receptor subfamily B member 4 isoform 2 [Homo sapiens]	21.8	655	8%	981	100%
NP_037400.1	galactoside-binding soluble lectin 13 [Homo sapiens] >gb\|ACR09638.1\| galectin-13 precursor [Homo sapiens] >gb\|ACR09639.1\| galectin-13 precursor [Homo sapiens] >gb\|ACR09640.1\| galectin-13 precursor [Homo sapiens]	21.8	162	2%	981	87%
NP_003184.1	tubulin-specific chaperone E [Homo sapiens] >ref\|NP_001072983.1\| tubulin-specific chaperone E [Homo sapiens]	21.8	507	6%	981	100%
P17693.1	RecName: Full=HLA class I histocompatibility antigen, alpha chain G; AltName: Full=HLA G antigen; Flags: Precursor	21.8	246	3%	981	100%
NP_775088.1	interleukin-28 receptor subunit alpha isoform 3 [Homo sapiens]	21.8	403	5%	981	100%
Q15262.2	RecName: Full=Receptor-type tyrosine-protein phosphatase kappa; Short=Protein-tyrosine phosphatase kappa; Short=R-PTP-kappa; Flags: Precursor	21.8	1163	14%	981	100%
1FQV_A	Chain A, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|C Chain C, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|E Chain E, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|G Chain G, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|I Chain I, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|K Chain K, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|M Chain M, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|O Chain O, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex	21.8	349	5%	981	100%
CAC03811.1	T-cell receptor beta chain [Homo sapiens]	21.8	88.5	0%	981	85%
CAB59369.1	T cell receptor beta chain variable region [Homo sapiens]	21.8	87.6	0%	981	85%
NP_055258.1	interleukin-17B precursor [Homo sapiens]	21.8	199	2%	981	85%
1NBQ_A	Chain A, Crystal Structure Of Human Junctional Adhesion Molecule Type 1 >pdb\|1NBQ\|B Chain B, Crystal Structure Of Human Junctional Adhesion Molecule Type 1	21.8	227	3%	981	83%
CAC03888.1	T-cell receptor beta chain [Homo sapiens]	21.8	70.0	0%	981	85%
CAD19802.1	aminopeptidase N, P 150 [Homo sapiens]	21.8	222	3%	981	83%
Q70J99.1	RecName: Full=Protein unc-13 homolog D; AltName: Full=Munc13-4	21.8	1165	15%	981	100%
NP_056154.1	activity-dependent neuroprotector homeobox protein [Homo sapiens] >ref\|NP_852107.1\| activity-dependent neuroprotector homeobox protein [Homo sapiens]	21.8	796	10%	981	100%
NP_005499.1	C-C chemokine receptor type 4 [Homo sapiens]	21.8	326	4%	981	100%
P42166.2	RecName: Full=Lamina-associated polypeptide 2, isoform alpha; AltName: Full=Thymopoietin isoform alpha; Short=TP alpha; AltName: Full=Thymopoietin-related peptide isoform alpha; Short=TPRP isoform alpha; Contains: RecName: Full=Thymopoietin; Short=TP; AltName: Full=Splenin; Contains: RecName: Full=Thymopentin; AltName: Full=TP5	21.8	535	7%	981	100%
NP_009193.2	protein DJ-1 [Homo sapiens] >ref\|NP_001116849.1\| protein DJ-1 [Homo sapiens]	21.8	54.5	1%	981	83%
CAC03892.1	T-cell receptor beta chain [Homo sapiens]	21.8	54.5	0%	981	85%
CAC03873.1	T-cell receptor beta chain [Homo sapiens]	21.8	74.2	1%	981	100%
NP_057580.3	E3 ubiquitin-protein ligase MARCH2 isoform 1 [Homo sapiens] >ref\|NP_001005415.1\| E3 ubiquitin-protein ligase MARCH2 isoform 1 [Homo sapiens] >sp\|Q9P0N8.1\|MARH2_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH2; AltName: Full=Membrane-associated RING finger protein 2; AltName: Full=Membrane-associated RING-CH protein II; Short=MARCH-II; AltName: Full=RING finger protein 172	21.8	276	4%	981	100%
1QM2_A	Chain A, Human Prion Protein Fragment 121-230 >pdb\|1QM3\|A Chain A, Human Prion Protein Fragment 121-230	21.8	73.4	1%	981	71%
NP_002246.5	killer cell immunoglobulin-like receptor 2DL4 isoform a [Homo sapiens]	21.8	414	5%	981	100%
O75575.1	RecName: Full=DNA-directed RNA polymerase III subunit RPC9; Short=RNA polymerase III subunit C9; AltName: Full=Calcitonin gene-related peptide-receptor component protein; Short=CGRP-receptor component protein; Short=CGRP-RCP; Short=CGRPRCP; Short=HsC17	21.8	141	1%	981	100%
NP_057268.1	C-type lectin domain family 4 member A isoform 1 [Homo sapiens] >sp\|Q9UMR7.1\|CLC4A_HUMAN RecName: Full=C-type lectin domain family 4 member A; AltName: Full=C-type lectin superfamily member 6; AltName: Full=Dendritic cell immunoreceptor; AltName: Full=Lectin-like immunoreceptor; AltName: Full=C-type lectin DDB27	21.8	407	4%	981	100%
CAB51736.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	126	1%	981	100%
NP_005229.1	protein C-ets-1 isoform 2 [Homo sapiens]	21.8	387	4%	981	100%
NP_004032.2	beta-arrestin-1 isoform A [Homo sapiens]	21.8	428	6%	981	100%
NP_054721.1	inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform 1 [Homo sapiens] >sp\|Q14164.1\|IKKE_HUMAN RecName: Full=Inhibitor of nuclear factor kappa-B kinase subunit epsilon; Short=I-kappa-B kinase epsilon; Short=IkBKE; Short=IKK-epsilon; Short=IKK-E; AltName: Full=Inducible I kappa-B kinase; Short=IKK-i	21.8	925	11%	981	100%
S69897	Ig heavy chain V region (clone RFSJ5H), rheumatoid factor - human	21.8	109	1%	981	100%
NP_004802.1	leupaxin isoform 2 [Homo sapiens]	21.8	291	3%	981	100%
CAC03798.1	T-cell receptor beta chain [Homo sapiens]	21.8	76.8	1%	981	100%
NP_055286.1	serine protease inhibitor Kazal-type 4 precursor [Homo sapiens]	21.8	40.7	0%	981	83%
NP_057105.2	ubiquitin-conjugating enzyme E2 J1 [Homo sapiens]	21.8	334	4%	981	100%
CAB51720.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.8	234	3%	981	100%
Q9N2K0.1	RecName: Full=HERV-H_2q24.3 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=Env protein HERV-H/p62; AltName: Full=HERV-H/env62; AltName: Full=Env protein HERV-H19; AltName: Full=Env protein HERV-Hcl.3; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor	21.8	836	12%	981	100%
P19320.1	RecName: Full=Vascular cell adhesion protein 1; Short=V-CAM 1; Short=VCAM-1; AltName: Full=INCAM-100; AltName: CD_antigen=CD106; Flags: Precursor	21.8	832	10%	981	100%
NP_005857.1	sigma non-opioid intracellular receptor 1 isoform 1 [Homo sapiens]	21.8	240	3%	981	83%
3D1V_A	Chain A, Crystal Structure Of Human Pnp Complexed With 2-Mercapto(3h) Quinazolinone	21.8	219	2%	981	100%
2VH5_R	Chain R, Crystal Structure Of Hras(G12v) - Anti-Ras Fv (Disulfide Free Mutant) Complex	21.8	207	2%	981	100%
AAA78791.1	adenosine deaminase [Homo sapiens]	21.8	236	3%	981	100%
NP_000577.2	interleukin-2 precursor [Homo sapiens] >sp\|P60568.1\|IL2_HUMAN RecName: Full=Interleukin-2; Short=IL-2; AltName: Full=T-cell growth factor; Short=TCGF; AltName: INN=Aldesleukin; Flags: Precursor >gb\|AAD48509.1\| interleukin 2 precursor [Homo sapiens]	21.8	156	2%	981	100%
1IAR_B	Chain B, Interleukin-4 RECEPTOR ALPHA CHAIN COMPLEX	21.8	230	2%	981	100%
NP_009075.1	polycomb group RING finger protein 2 [Homo sapiens]	21.8	384	6%	981	100%
CAA84374.1	IgG heavy chain, variable region, rheumatoid factor [Homo sapiens]	21.8	109	1%	981	100%
NP_059830.1	WD repeat-containing protein 1 isoform 1 [Homo sapiens]	21.8	353	5%	981	100%
NP_659502.2	protein pellino homolog 3 isoform 1 [Homo sapiens] >sp\|Q8N2H9.2\|PELI3_HUMAN RecName: Full=Protein pellino homolog 3; Short=Pellino-3	21.8	413	4%	981	100%
1VSC_A	Chain A, Vcam-1 >pdb\|1VSC\|B Chain B, Vcam-1	21.8	277	4%	981	100%
NP_004224.1	CD83 antigen isoform a [Homo sapiens]	21.8	308	4%	981	100%
NP_848634.1	family with sequence similarity 19 (chemokine (C-C motif)-like), member A2 precursor [Homo sapiens]	21.8	105	1%	981	83%
NP_002300.1	leukemia inhibitory factor precursor [Homo sapiens]	21.8	228	2%	981	100%
NP_006135.1	granzyme A precursor [Homo sapiens] >sp\|P12544.1\|GRAA_HUMAN RecName: Full=Granzyme A; AltName: Full=Granzyme-1; AltName: Full=Cytotoxic T-lymphocyte proteinase 1; AltName: Full=Hanukkah factor; Short=H factor; Short=HF; AltName: Full=CTL tryptase; AltName: Full=Fragmentin-1; Flags: Precursor	21.8	286	4%	981	100%
CAC03846.1	T-cell receptor beta chain [Homo sapiens]	21.8	70.4	0%	981	85%
1QLX_A	Chain A, Human Prion Protein >pdb\|1QLZ\|A Chain A, Human Prion Protein	21.8	123	1%	981	83%
NP_006564.1	tumor necrosis factor ligand superfamily member 13B isoform 1 [Homo sapiens]	21.0	369	4%	1055	83%
NP_001139117.1	tumor necrosis factor ligand superfamily member 13B isoform 2 [Homo sapiens]	21.0	334	4%	1073	83%
1OSG_A	Chain A, Complex Between Baff And A Br3 Derived Peptide Presented In A Beta-Hairpin Scaffold >pdb\|1OSG\|B Chain B, Complex Between Baff And A Br3 Derived Peptide Presented In A Beta-Hairpin Scaffold >pdb\|1OSG\|C Chain C, Complex Between Baff And A Br3 Derived Peptide Presented In A Beta-Hairpin Scaffold >pdb\|1OSG\|D Chain D, Complex Between Baff And A Br3 Derived Peptide Presented In A Beta-Hairpin Scaffold >pdb\|1OSG\|E Chain E, Complex Between Baff And A Br3 Derived Peptide Presented In A Beta-Hairpin Scaffold >pdb\|1OSG\|F Chain F, Complex Between Baff And A Br3 Derived Peptide Presented In A Beta-Hairpin Scaffold	21.0	316	4%	1120	83%
3MLW_L	Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 1006-15d In Complex With An Mn V3 Peptide >pdb\|3MLW\|M Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 1006-15d In Complex With An Mn V3 Peptide	21.4	261	4%	1316	100%
3GO1_L	Chain L, Crystal Structure Of Anti-Hiv-1 Fab 268-D In Complex With V3 Peptide Mn	21.4	202	3%	1316	100%
3MOP_K	Chain K, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|L Chain L, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|M Chain M, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|N Chain N, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2	21.4	108	1%	1316	100%
Q9H1E1.2	RecName: Full=Ribonuclease 7; Short=RNase 7; AltName: Full=Skin-derived antimicrobial protein 2; Short=SAP-2; Flags: Precursor	21.4	237	3%	1316	100%
NP_001167554.1	NACHT, LRR and PYD domains-containing protein 2 isoform 3 [Homo sapiens]	21.4	1126	13%	1316	100%
NP_001163889.1	myelin-oligodendrocyte glycoprotein isoform alpha6 precursor [Homo sapiens]	21.4	246	3%	1316	100%
3GHE_H	Chain H, Crystal Structure Of Anti-Hiv-1 Fab 537-10d In Complex With V3 Peptide Mn	21.4	368	5%	1316	100%
2WGP_A	Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14 >pdb\|2WGP\|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14	21.4	118	1%	1316	80%
ACN63291.1	B cell antibody heavy chain variable region [Homo sapiens]	21.4	133	2%	1316	83%
ACN63275.1	B cell antibody heavy chain variable region [Homo sapiens]	21.4	133	2%	1316	83%
3GIZ_H	Chain H, Crystal Structure Of The Fab Fragment Of Anti-Cd20 Antibody Ofatumumab	21.4	209	3%	1316	100%
3GJG_H	Chain H, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|I Chain I, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|O Chain O, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|T Chain T, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|H Chain H, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|I Chain I, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|O Chain O, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|T Chain T, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies	21.4	206	3%	1316	100%
3GJG_L	Chain L, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|G Chain G, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|N Chain N, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|S Chain S, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|L Chain L, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|G Chain G, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|N Chain N, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|S Chain S, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies	21.4	247	4%	1316	80%
3GJE_H	Chain H, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJE\|B Chain B, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJF\|H Chain H, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJF\|M Chain M, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies	21.4	189	3%	1316	100%
3GJE_L	Chain L, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJE\|A Chain A, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJF\|L Chain L, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJF\|K Chain K, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies	21.4	212	3%	1316	80%
2WBJ_C	Chain C, Tcr Complex >pdb\|2WBJ\|G Chain G, Tcr Complex	21.4	281	3%	1316	100%
ACJ37261.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	21.4	230	3%	1316	100%
ACJ37249.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	21.4	210	3%	1316	100%
3F5X_B	Chain B, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its Active Site >pdb\|3F5X\|D Chain D, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At Its Active Site	21.4	456	6%	1316	100%
3FCS_B	Chain B, Structure Of Complete Ectodomain Of Integrin Aiibb3 >pdb\|3FCS\|D Chain D, Structure Of Complete Ectodomain Of Integrin Aiibb3	21.4	765	10%	1316	100%
3CHN_J	Chain J, Solution Structure Of Human Secretory Iga1 >pdb\|3CM9\|J Chain J, Solution Structure Of Human Siga2	21.4	167	2%	1316	80%
3B7S_A	Chain A, [e296q]lta4h In Complex With Rsr Substrate >pdb\|3B7T\|A Chain A, [e296q]lta4h In Complex With Arg-Ala-Arg Substrate	21.4	652	8%	1316	100%
3FCU_B	Chain B, Structure Of Headpiece Of Integrin Aiibb3 In Open Conformation >pdb\|3FCU\|D Chain D, Structure Of Headpiece Of Integrin Aiibb3 In Open Conformation >pdb\|3FCU\|F Chain F, Structure Of Headpiece Of Integrin Aiibb3 In Open Conformation	21.4	517	7%	1316	100%
CAR63037.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	89.7	1%	1316	100%
CAR62841.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	54.9	1%	1316	57%
CAR62761.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	161	2%	1316	100%
CAR62606.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.4	73.4	1%	1316	100%
3BN3_B	Chain B, Crystal Structure Of Icam-5 In Complex With Al I Domain	21.4	331	4%	1316	100%
2R59_A	Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 >pdb\|3B7R\|L Chain L, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3040 >pdb\|3B7U\|X Chain X, Leukotriene A4 Hydrolase Complexed With Kelatorphan	21.4	652	8%	1316	100%
AAL04520.2	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	21.4	111	1%	1316	100%
3DGC_L	Chain L, Structure Of Il-22IL-22r1 >pdb\|3DGC\|M Chain M, Structure Of Il-22IL-22r1	21.4	108	1%	1316	100%
2RD7_C	Chain C, Human Complement Membrane Attack Proteins Share A Common Fold With Bacterial Cytolysins	21.4	37.3	0%	1316	80%
AAL04519.2	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	21.4	111	1%	1316	83%
2R56_H	Chain H, Crystal Structure Of A Recombinant Ige Fab Fragment In Complex With Bovine Beta-Lactoglobulin Allergen >pdb\|2R56\|I Chain I, Crystal Structure Of A Recombinant Ige Fab Fragment In Complex With Bovine Beta-Lactoglobulin Allergen	21.4	170	2%	1316	100%
2QOS_C	Chain C, Crystal Structure Of Complement Protein C8 In Complex With A Peptide Containing The C8 Binding Site On C8	21.4	37.3	0%	1316	80%
2QFH_A	Chain A, Solution Structure Of The C-Terminal Scr-1620 FRAGMENT OF Complement Factor H	21.4	357	5%	1316	100%
NP_005083.2	tumor necrosis factor ligand superfamily member 18 [Homo sapiens]	21.4	291	3%	1316	100%
NP_115961.2	ribonuclease 7 precursor [Homo sapiens]	21.4	237	3%	1316	100%
2J6E_L	Chain L, Crystal Structure Of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc Epitope And Evidence For Affinity Maturation >pdb\|2J6E\|M Chain M, Crystal Structure Of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc Epitope And Evidence For Affinity Maturation	21.4	279	5%	1316	83%
2OCW_A	Chain A, Solution Structure Of Human Secretory Component >pdb\|3CHN\|S Chain S, Solution Structure Of Human Secretory Iga1 >pdb\|3CM9\|S Chain S, Solution Structure Of Human Siga2	21.4	606	8%	1316	100%
2NW2_A	Chain A, Crystal Structure Of Els4 Tcr At 1.4a	21.4	198	2%	1316	100%
2NX5_D	Chain D, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|I Chain I, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|N Chain N, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|T Chain T, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a	21.4	180	2%	1316	100%
NP_001135888.1	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform b precursor [Homo sapiens]	21.4	394	6%	1316	100%
NP_777552.2	CMRF35-like molecule 7 [Homo sapiens]	21.4	106	1%	1316	100%
NP_001167553.1	NACHT, LRR and PYD domains-containing protein 2 isoform 2 [Homo sapiens]	21.4	1127	13%	1316	100%
2ICE_B	Chain B, Crig Bound To C3c >pdb\|2ICE\|E Chain E, Crig Bound To C3c >pdb\|3L3O\|B Chain B, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3L3O\|E Chain E, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3NMS\|B Chain B, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement C3c >pdb\|3NSA\|B Chain B, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c >pdb\|3NSA\|E Chain E, Staphylococcal Complement Inhibitor (Scin) In Complex With Human Complement Component C3c	21.4	318	4%	1316	100%
NP_001007241.2	pancreatic secretory granule membrane major glycoprotein GP2 isoform 1 [Homo sapiens]	21.4	551	7%	1316	100%
NP_001007242.2	pancreatic secretory granule membrane major glycoprotein GP2 isoform 3 [Homo sapiens]	21.4	431	6%	1316	100%
NP_001007243.2	pancreatic secretory granule membrane major glycoprotein GP2 isoform 4 [Homo sapiens]	21.4	450	6%	1316	100%
NP_001493.2	pancreatic secretory granule membrane major glycoprotein GP2 isoform 2 [Homo sapiens]	21.4	585	8%	1316	100%
2J67_A	Chain A, The Tir Domain Of Human Toll-Like Receptor 10 (Tlr10) >pdb\|2J67\|B Chain B, The Tir Domain Of Human Toll-Like Receptor 10 (Tlr10)	21.4	218	3%	1316	80%
NP_694882.1	disintegrin and metalloproteinase domain-containing protein 33 isoform beta preproprotein [Homo sapiens]	21.4	757	11%	1316	100%
Q9HC78.3	RecName: Full=Zinc finger and BTB domain-containing protein 20; AltName: Full=Zinc finger protein 288; AltName: Full=Dendritic-derived BTB/POZ zinc finger protein	21.4	615	8%	1316	100%
ABG38456.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38457.1\| immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38459.1\| immunglobulin heavy chain variable region [Homo sapiens]	21.4	194	2%	1316	100%
ABG38458.1	immunglobulin heavy chain variable region [Homo sapiens]	21.4	208	2%	1316	100%
ABG38340.1	immunoglobulin light chain variable region [Homo sapiens]	21.4	70.4	1%	1316	100%
CAJ14094.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14063.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14093.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14098.1\| T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14096.1	T-cell receptor beta chain [Homo sapiens]	21.4	38.2	0%	1316	83%
CAJ14101.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14100.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14067.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14097.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14102.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14065.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14099.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
CAJ14095.1	T-cell receptor beta chain [Homo sapiens]	21.4	21.4	0%	1316	70%
2F53_D	Chain D, Directed Evolution Of Human T-Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Apparent Cross-Reactivity	21.4	262	3%	1316	100%
2F54_D	Chain D, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity >pdb\|2F54\|K Chain K, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity	21.4	300	3%	1316	100%
2DD8_L	Chain L, Crystal Structure Of Sars-Cov Spike Receptor-Binding Domain Complexed With Neutralizing Antibody >pdb\|2G75\|B Chain B, Crystal Structure Of Anti-Sars M396 Antibody >pdb\|2G75\|D Chain D, Crystal Structure Of Anti-Sars M396 Antibody	21.4	145	1%	1316	83%
AAV87530.1	mesothelin precursor [Homo sapiens]	21.4	681	8%	1316	100%
NP_996535.2	myelin-oligodendrocyte glycoprotein isoform alpha2 precursor [Homo sapiens]	21.4	361	4%	1316	100%
NP_996534.2	myelin-oligodendrocyte glycoprotein isoform beta3 precursor [Homo sapiens]	21.4	325	4%	1316	100%
NP_996533.2	myelin-oligodendrocyte glycoprotein isoform beta5 precursor [Homo sapiens]	21.4	325	4%	1316	100%
NP_001008230.1	myelin-oligodendrocyte glycoprotein isoform beta2 precursor [Homo sapiens]	21.4	325	4%	1316	100%
NP_002424.3	myelin-oligodendrocyte glycoprotein isoform beta1 precursor [Homo sapiens]	21.4	362	5%	1316	100%
NP_001008229.1	myelin-oligodendrocyte glycoprotein isoform alpha3 precursor [Homo sapiens]	21.4	363	5%	1316	100%
NP_000144.2	galactocerebrosidase isoform a precursor [Homo sapiens]	21.4	774	8%	1316	100%
NP_001009959.1	ermin isoform a [Homo sapiens]	21.4	225	4%	1316	80%
NP_055478.2	lysine-specific demethylase 4A [Homo sapiens]	21.4	781	9%	1316	100%
NP_996532.2	myelin-oligodendrocyte glycoprotein isoform alpha1 precursor [Homo sapiens]	21.4	397	5%	1316	100%
NP_001091948.1	HLA class I histocompatibility antigen, alpha chain F isoform 3 precursor [Homo sapiens]	21.4	304	4%	1316	100%
NP_001922.2	dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial precursor [Homo sapiens]	21.4	573	7%	1316	100%
NP_112155.2	T-cell surface glycoprotein CD1e, membrane-associated isoform a precursor [Homo sapiens]	21.4	463	6%	1316	100%
NP_687034.1	T-cell activation Rho GTPase-activating protein isoform a [Homo sapiens]	21.4	636	8%	1316	100%
Q9BT09.1	RecName: Full=Protein canopy homolog 3; AltName: Full=Trinucleotide repeat-containing gene 5 protein; AltName: Full=CTG repeat protein 4a; AltName: Full=Expanded repeat-domain protein CAG/CTG 5; AltName: Full=Protein associated with TLR4; Flags: Precursor	21.4	295	4%	1316	100%
NP_620165.1	T-cell activation Rho GTPase-activating protein isoform c [Homo sapiens]	21.4	422	6%	1316	100%
1CSY_A	Chain A, Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed With A Phosphopeptidefrom The Gamma Chain Of The High Affinity Immunoglobin G Receptor, Nmr >pdb\|1CSZ\|A Chain A, Syk Tyrosine Kinase C-Terminal Sh2 Domain Complexed With A Phosphopeptidefrom The Gamma Chain Of The High Affinity Immunoglobin G Receptor, Nmr	21.4	158	1%	1316	100%
ACR09652.1	galectin-16 precursor [Homo sapiens]	21.4	121	1%	1316	85%
NP_002453.2	interferon-induced GTP-binding protein Mx1 [Homo sapiens] >ref\|NP_001138397.1\| interferon-induced GTP-binding protein Mx1 [Homo sapiens] >ref\|NP_001171517.1\| interferon-induced GTP-binding protein Mx1 [Homo sapiens]	21.4	642	8%	1316	100%
NP_852004.1	interleukin-6 receptor subunit alpha isoform 2 precursor [Homo sapiens]	21.4	385	4%	1316	100%
NP_001177370.1	hypothetical protein LOC148003 [Homo sapiens]	21.4	121	1%	1316	85%
NP_002249.1	killer cell lectin-like receptor subfamily B member 1 [Homo sapiens]	21.4	290	4%	1316	85%
AAA36073.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	21.4	69.6	0%	1316	100%
AAA36080.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	21.4	140	2%	1316	100%
AAA36066.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	21.4	138	1%	1316	100%
NP_689501.1	protein orai-3 [Homo sapiens] >sp\|Q9BRQ5.2\|ORAI3_HUMAN RecName: Full=Protein orai-3; AltName: Full=Transmembrane protein 142C	21.4	302	3%	1316	100%
NP_001075106.1	leukocyte immunoglobulin-like receptor subfamily B member 1 isoform 2 [Homo sapiens]	21.4	781	11%	1316	100%
AAA99717.1	complement C4B precursor [Homo sapiens]	21.4	1629	23%	1316	100%
NP_001075108.1	leukocyte immunoglobulin-like receptor subfamily B member 1 isoform 4 [Homo sapiens]	21.4	764	10%	1316	100%
NP_001075107.1	leukocyte immunoglobulin-like receptor subfamily B member 1 isoform 3 [Homo sapiens]	21.4	765	10%	1316	100%
A8K4G0.2	RecName: Full=CMRF35-like molecule 7; Short=CLM-7; AltName: Full=CMRF35-A2; AltName: Full=Immune receptor expressed on myeloid cells 3; Short=IREM-3; AltName: Full=Triggering receptor expressed on myeloid cells 5; Short=TREM-5; AltName: Full=Leukocyte mono-Ig-like receptor 5; AltName: Full=CD300 antigen-like family member B; AltName: CD_antigen=CD300b; Flags: Precursor	21.4	106	1%	1316	100%
AAB52592.1	immunoglobulin heavy chain [Homo sapiens]	21.4	107	1%	1316	85%
NP_001108409.1	SH2 domain-containing protein 1A isoform 2 [Homo sapiens]	21.4	74.2	1%	1316	71%
NP_001032614.1	galactocerebrosidase isoform b precursor [Homo sapiens]	21.4	591	6%	1316	100%
AAY57178.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	95.7	1%	1316	80%
AAY57084.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	124	2%	1316	100%
AAY57061.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	106	2%	1316	80%
AAY33451.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.4	58.3	0%	1316	71%
AAY33467.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.4	103	1%	1316	83%
AAY33290.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.4	74.2	1%	1316	100%
AAY33249.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.4	122	1%	1316	83%
AAY33250.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.4	186	2%	1316	100%
AAY33222.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.4	57.1	0%	1316	83%
NP_002719.3	bone marrow proteoglycan preproprotein [Homo sapiens] >sp\|P13727.2\|PRG2_HUMAN RecName: Full=Bone marrow proteoglycan; Short=BMPG; AltName: Full=Proteoglycan 2; Contains: RecName: Full=Eosinophil granule major basic protein; Short=EMBP; Short=MBP; AltName: Full=Pregnancy-associated major basic protein; Flags: Precursor	21.4	300	3%	1316	100%
NP_740750.1	cell surface glycoprotein CD200 receptor 1 isoform d [Homo sapiens]	21.4	521	7%	1316	100%
AAB25911.1	anti-Hib capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	21.4	71.3	1%	1316	100%
NP_065762.1	ermin isoform b [Homo sapiens]	21.4	207	3%	1316	80%
NP_006059.2	toll-like receptor 6 precursor [Homo sapiens] >sp\|Q9Y2C9.2\|TLR6_HUMAN RecName: Full=Toll-like receptor 6; AltName: CD_antigen=CD286; Flags: Precursor	21.4	859	12%	1316	100%
3FUP_A	Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes >pdb\|3FUP\|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes	21.4	252	3%	1316	100%
CAD10382.2	killer cell immunoglobulin receptor [Homo sapiens]	21.4	376	5%	1316	100%
2A74_B	Chain B, Human Complement Component C3c >pdb\|2A74\|E Chain E, Human Complement Component C3c >pdb\|2QKI\|B Chain B, Human C3c In Complex With The Inhibitor Compstatin >pdb\|2QKI\|E Chain E, Human C3c In Complex With The Inhibitor Compstatin	21.4	250	3%	1316	100%
Q96M98.2	RecName: Full=Parkin coregulated gene protein; AltName: Full=PARK2 coregulated gene protein; AltName: Full=Molecular chaperone/chaperonin-binding protein	21.4	191	3%	1316	83%
1VDG_A	Chain A, Crystal Structure Of Lir1.01, One Of The Alleles Of Lir1 >pdb\|1VDG\|B Chain B, Crystal Structure Of Lir1.01, One Of The Alleles Of Lir1	21.4	206	3%	1316	100%
2BNQ_D	Chain D, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2BNR\|D Chain D, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines	21.4	281	3%	1316	100%
2BNU_A	Chain A, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines	21.4	266	3%	1316	100%
1YMM_D	Chain D, TcrHLA-Dr2bMBP-Peptide Complex	21.4	263	3%	1316	100%
1X9Q_A	Chain A, 4m5.3 Anti-Fluorescein Single Chain Antibody Fragment (Scfv)	21.4	286	3%	1316	100%
1TP0_A	Chain A, Triple Mutation In Interleukin 1 Beta Cavity:replacement Of Phenylalanines With Tryptophan	21.4	91.8	1%	1316	80%
1TQE_P	Chain P, Mechanism Of Recruitment Of Class Ii Histone Deacetylases By Myocyte Enhancer Factor-2 >pdb\|1TQE\|Q Chain Q, Mechanism Of Recruitment Of Class Ii Histone Deacetylases By Myocyte Enhancer Factor-2 >pdb\|1TQE\|R Chain R, Mechanism Of Recruitment Of Class Ii Histone Deacetylases By Myocyte Enhancer Factor-2 >pdb\|1TQE\|S Chain S, Mechanism Of Recruitment Of Class Ii Histone Deacetylases By Myocyte Enhancer Factor-2	21.4	138	2%	1316	100%
CAH03672.1	killer cell immunoglobulin-like receptor [Homo sapiens]	21.4	536	6%	1316	100%
1S0L_A	Chain A, Interleukin 1 Beta Mutant F42w	21.4	88.9	1%	1316	80%
CAE54365.1	immunoglobulin light chain [Homo sapiens]	21.4	113	1%	1316	100%
3G9V_B	Chain B, Crystal Structure Of A Soluble Decoy Receptor Il-22bp Bound To Interleukin-22 >pdb\|3G9V\|D Chain D, Crystal Structure Of A Soluble Decoy Receptor Il-22bp Bound To Interleukin-22	21.4	125	1%	1316	100%
CAD88709.1	immunoglobulin lambda light chain variable region [Homo sapiens]	21.4	121	2%	1316	83%
NP_940894.1	C-type lectin domain family 4 member G [Homo sapiens]	21.4	246	4%	1316	83%
CAD88648.1	immunoglobulin heavy chain [Homo sapiens]	21.4	103	1%	1316	100%
CAD88681.1	immunoglobulin heavy chain [Homo sapiens]	21.4	37.8	1%	1316	50%
1JVK_A	Chain A, Three-Dimensional Structure Of An Immunoglobulin Light Chain Dimer Acting As A Lethal Amyloid Precursor >pdb\|1JVK\|B Chain B, Three-Dimensional Structure Of An Immunoglobulin Light Chain Dimer Acting As A Lethal Amyloid Precursor >pdb\|1LGV\|A Chain A, Structure Of A Human Bence-Jones Dimer Crystallized In U.S. Space Shuttle Mission Sts-95: 100k >pdb\|1LGV\|B Chain B, Structure Of A Human Bence-Jones Dimer Crystallized In U.S. Space Shuttle Mission Sts-95: 100k >pdb\|1LHZ\|A Chain A, Structure Of A Human Bence-Jones Dimer Crystallized In U.S. Space Shuttle Mission Sts-95: 293k >pdb\|1LHZ\|B Chain B, Structure Of A Human Bence-Jones Dimer Crystallized In U.S. Space Shuttle Mission Sts-95: 293k	21.4	191	4%	1316	100%
NP_004748.2	aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform a precursor [Homo sapiens] >ref\|NP_001135887.1\| aminoacyl tRNA synthase complex-interacting multifunctional protein 1 isoform a precursor [Homo sapiens]	21.4	378	5%	1316	100%
C41287	Ig heavy chain precursor V-I region (71-31) (anti-HIV-1) - human >gb\|AAA52943.1\| anti-HIV1 antibody [Homo sapiens]	21.4	123	1%	1316	83%
CAC37570.1	artemis protein [Homo sapiens]	21.4	796	11%	1316	100%
NP_683513.1	C-C motif chemokine 28 precursor [Homo sapiens]	21.4	123	2%	1316	100%
CAB51713.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	105	1%	1316	70%
NP_473455.2	T-cell activation Rho GTPase-activating protein isoform b [Homo sapiens]	21.4	879	12%	1316	100%
NP_000556.1	interleukin-6 receptor subunit alpha isoform 1 precursor [Homo sapiens] >sp\|P08887.1\|IL6RA_HUMAN RecName: Full=Interleukin-6 receptor subunit alpha; Short=IL-6 receptor subunit alpha; Short=IL-6R subunit alpha; Short=IL-6R-alpha; Short=IL-6RA; AltName: Full=IL-6R 1; AltName: Full=Membrane glycoprotein 80; Short=gp80; AltName: CD_antigen=CD126; Flags: Precursor	21.4	478	6%	1316	100%
NP_009149.2	RING finger protein 139 [Homo sapiens] >sp\|Q8WU17.1\|RN139_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF139; AltName: Full=RING finger protein 139; AltName: Full=Translocation in renal carcinoma on chromosome 8 protein	21.4	982	17%	1316	100%
2DL2_A	Chain A, Killer Immunoglobulin Receptor 2dl2	21.4	254	3%	1316	100%
1L2H_A	Chain A, Crystal Structure Of Interleukin 1-Beta F42wW120F MUTANT	21.4	103	1%	1316	83%
NP_037421.2	killer cell immunoglobulin-like receptor 3DL1 precursor [Homo sapiens]	21.4	568	8%	1316	100%
CAB51712.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	187	2%	1316	83%
JC7679	dendritic cell-derived BTB/POZ zinc finger protein, DPZF - human	21.4	634	8%	1316	100%
NP_079470.1	inositol-trisphosphate 3-kinase C [Homo sapiens]	21.4	740	9%	1316	100%
CAC03806.1	T-cell receptor beta chain [Homo sapiens]	21.4	108	1%	1316	83%
CAD68159.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	193	2%	1316	100%
CAC85284.1	anti-peptide/MHC complex HLA-A1/MAGE-A1 monoclonal antibody heavy chain [Homo sapiens]	21.4	210	3%	1316	100%
2CD0_A	Chain A, Structure Of Human Lambda-6 Light Chain Dimer Wil >pdb\|2CD0\|B Chain B, Structure Of Human Lambda-6 Light Chain Dimer Wil	21.4	105	1%	1316	85%
CAB51733.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	124	1%	1316	100%
Q13421.2	RecName: Full=Mesothelin; AltName: Full=Pre-pro-megakaryocyte-potentiating factor; AltName: Full=CAK1 antigen; Contains: RecName: Full=Megakaryocyte-potentiating factor; Short=MPF; Contains: RecName: Full=Mesothelin, cleaved form; Flags: Precursor	21.4	715	9%	1316	100%
NP_001029029.1	protein artemis isoform d [Homo sapiens] >ref\|NP_001029030.1\| protein artemis isoform c [Homo sapiens]	21.4	560	8%	1316	100%
NP_149124.3	2',3'-cyclic-nucleotide 3'-phosphodiesterase [Homo sapiens]	21.4	361	6%	1316	85%
NP_003844.1	interleukin-18 receptor accessory protein precursor [Homo sapiens]	21.4	591	7%	1316	100%
NP_065131.1	eppin isoform 1 precursor [Homo sapiens]	21.4	88.5	1%	1316	80%
CAB51735.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	124	1%	1316	100%
1N3Y_A	Chain A, Crystal Structure Of The Alpha-X Beta2 Integrin I Domain	21.4	172	2%	1316	100%
1IW2_A	Chain A, X-Ray Structure Of Human Complement Protein C8gamma At Ph7.O >pdb\|1LF7\|A Chain A, Crystal Structure Of Human Complement Protein C8gamma At 1.2 A Resolution	21.4	37.3	0%	1316	80%
1M27_A	Chain A, Crystal Structure Of SapFYNSH3SLAM TERNARY COMPLEX	21.4	74.2	1%	1316	71%
AAL65231.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	72.1	1%	1316	83%
NP_079496.1	disintegrin and metalloproteinase domain-containing protein 33 isoform alpha preproprotein [Homo sapiens]	21.4	790	11%	1316	100%
NP_110414.1	complement factor H-related protein 5 precursor [Homo sapiens]	21.4	508	8%	1316	100%
P05423.2	RecName: Full=DNA-directed RNA polymerase III subunit RPC4; Short=RNA polymerase III subunit C4; AltName: Full=DNA-directed RNA polymerase III subunit D; AltName: Full=RNA polymerase III 47 kDa subunit; AltName: Full=RPC53 homolog; AltName: Full=Protein BN51	21.4	278	4%	1316	100%
NP_000140.1	galactoside 3(4)-L-fucosyltransferase [Homo sapiens] >ref\|NP_001091108.1\| galactoside 3(4)-L-fucosyltransferase [Homo sapiens] >ref\|NP_001091109.1\| galactoside 3(4)-L-fucosyltransferase [Homo sapiens] >ref\|NP_001091110.1\| galactoside 3(4)-L-fucosyltransferase [Homo sapiens]	21.4	366	5%	1316	100%
NP_003371.2	vimentin [Homo sapiens]	21.4	417	5%	1316	100%
CAB46453.1	immunoglobulin light chain variable region [Homo sapiens]	21.4	150	2%	1316	85%
P15151.2	RecName: Full=Poliovirus receptor; AltName: Full=Nectin-like protein 5; Short=NECL-5; AltName: CD_antigen=CD155; Flags: Precursor	21.4	499	7%	1316	100%
CAB51307.1	immunoglobulin kappa chain variable region [Homo sapiens]	21.4	126	1%	1316	100%
NP_005558.1	galectin-3-binding protein [Homo sapiens] >sp\|Q08380.1\|LG3BP_HUMAN RecName: Full=Galectin-3-binding protein; AltName: Full=Lectin galactoside-binding soluble 3-binding protein; AltName: Full=Mac-2-binding protein; Short=Mac-2 BP; Short=MAC2BP; AltName: Full=Tumor-associated antigen 90K; AltName: Full=Basement membrane autoantigen p105; Flags: Precursor >emb\|CAA55699.1\| 90K [Homo sapiens]	21.4	456	6%	1316	100%
CAB51726.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	150	1%	1316	100%
CAA67057.1	TCR junctional sequence [Homo sapiens]	21.4	1072	1%	1316	83%
CAB51728.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	124	1%	1316	100%
NP_036200.2	cyclic AMP-dependent transcription factor ATF-5 [Homo sapiens] >ref\|NP_001180575.1\| cyclic AMP-dependent transcription factor ATF-5 [Homo sapiens]	21.4	366	3%	1316	100%
NP_060322.1	NACHT, LRR and PYD domains-containing protein 2 isoform 1 [Homo sapiens] >ref\|NP_001167552.1\| NACHT, LRR and PYD domains-containing protein 2 isoform 1 [Homo sapiens]	21.4	1143	13%	1316	100%
NP_071932.2	protein artemis isoform b [Homo sapiens]	21.4	560	8%	1316	100%
CAB51315.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.4	91.4	0%	1316	85%
NP_079515.2	programmed cell death 1 ligand 2 precursor [Homo sapiens]	21.4	338	3%	1316	100%
1FS1_B	Chain B, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FS1\|D Chain D, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FS2\|B Chain B, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FS2\|D Chain D, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex	21.4	155	2%	1316	80%
NP_112572.1	Fc receptor-like protein 4 precursor [Homo sapiens] >sp\|Q96PJ5.1\|FCRL4_HUMAN RecName: Full=Fc receptor-like protein 4; Short=FcR-like protein 4; Short=FcRL4; AltName: Full=Fc receptor homolog 4; Short=FcRH4; AltName: Full=IFGP family protein 2; Short=hIFGP2; AltName: Full=Immune receptor translocation-associated protein 1; Flags: Precursor	21.4	606	7%	1316	100%
1A02_N	Chain N, Structure Of The Dna Binding Domains Of Nfat, Fos And Jun Bound To Dna >pdb\|1PZU\|B Chain B, An Asymmetric Nfat1-Rhr Homodimer On A Pseudo-Palindromic, Kappa-B Site >pdb\|1PZU\|D Chain D, An Asymmetric Nfat1-Rhr Homodimer On A Pseudo-Palindromic, Kappa-B Site >pdb\|1PZU\|H Chain H, An Asymmetric Nfat1-Rhr Homodimer On A Pseudo-Palindromic, Kappa-B Site >pdb\|1PZU\|I Chain I, An Asymmetric Nfat1-Rhr Homodimer On A Pseudo-Palindromic, Kappa-B Site >pdb\|1PZU\|L Chain L, An Asymmetric Nfat1-Rhr Homodimer On A Pseudo-Palindromic, Kappa-B Site >pdb\|1PZU\|M Chain M, An Asymmetric Nfat1-Rhr Homodimer On A Pseudo-Palindromic, Kappa-B Site	21.4	146	1%	1316	100%
NP_003892.2	sphingosine-1-phosphate lyase 1 [Homo sapiens]	21.4	510	7%	1316	100%
NP_056074.1	ICOS ligand precursor [Homo sapiens] >sp\|O75144.2\|ICOSL_HUMAN RecName: Full=ICOS ligand; AltName: Full=B7 homolog 2; Short=B7-H2; AltName: Full=B7-like protein Gl50; AltName: Full=B7-related protein 1; Short=B7RP-1; AltName: CD_antigen=CD275; Flags: Precursor	21.4	291	4%	1316	100%
CAD10380.1	killer cell immunoglobulin receptor [Homo sapiens] >emb\|CAD10381.1\| killer cell immunoglobulin receptor [Homo sapiens]	21.4	549	8%	1316	100%
P02748.2	RecName: Full=Complement component C9; Contains: RecName: Full=Complement component C9a; Contains: RecName: Full=Complement component C9b; Flags: Precursor	21.4	508	7%	1316	100%
NP_071445.1	nucleotide-binding oligomerization domain-containing protein 2 [Homo sapiens]	21.4	1040	14%	1316	100%
1LQS_R	Chain R, Crystal Structure Of Human Cytomegalovirus Il-10 Bound To Soluble Human Il-10r1 >pdb\|1LQS\|S Chain S, Crystal Structure Of Human Cytomegalovirus Il-10 Bound To Soluble Human Il-10r1 >pdb\|1Y6M\|R Chain R, Crystal Structure Of Epstein-Barr Virus Il-10 Complexed With The Soluble Il-10r1 Chain >pdb\|1Y6N\|R Chain R, Crystal Structure Of Epstein-Barr Virus Il-10 Mutant (A87i) Complexed With The Soluble Il-10r1 Chain >pdb\|1Y6K\|R Chain R, Crystal Structure Of Human Il-10 Complexed With The Soluble Il-10r1 Chain	21.4	188	2%	1316	85%
NP_006660.3	leukocyte immunoglobulin-like receptor subfamily B member 1 isoform 1 [Homo sapiens] >sp\|Q8NHL6.1\|LIRB1_HUMAN RecName: Full=Leukocyte immunoglobulin-like receptor subfamily B member 1; Short=Leukocyte immunoglobulin-like receptor 1; Short=LIR-1; AltName: Full=Immunoglobulin-like transcript 2; Short=ILT-2; AltName: Full=Monocyte/macrophage immunoglobulin-like receptor 7; Short=MIR-7; AltName: Full=CD85 antigen-like family member J; AltName: CD_antigen=CD85j; Flags: Precursor	21.4	748	10%	1316	100%
CAC20410.1	ribonuclease 7 [Homo sapiens] >emb\|CAC84462.1\| ribonuclease 7 [Homo sapiens]	21.4	255	3%	1316	100%
NP_001323.1	catenin delta-2 [Homo sapiens]	21.4	1041	12%	1316	100%
NP_001241.1	tumor necrosis factor receptor superfamily member 5 isoform 1 precursor [Homo sapiens] >sp\|P25942.1\|TNR5_HUMAN RecName: Full=Tumor necrosis factor receptor superfamily member 5; AltName: Full=CD40L receptor; AltName: Full=B-cell surface antigen CD40; AltName: Full=Bp50; AltName: Full=CDw40; AltName: CD_antigen=CD40; Flags: Precursor	21.4	290	3%	1316	100%
P30461.1	RecName: Full=HLA class I histocompatibility antigen, B-13 alpha chain; AltName: Full=MHC class I antigen B*13; Flags: Precursor	21.4	243	3%	1316	100%
NP_001029027.1	protein artemis isoform a [Homo sapiens] >sp\|Q96SD1.2\|DCR1C_HUMAN RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair 1C protein; AltName: Full=SNM1 homolog C; Short=hSNM1C; AltName: Full=SNM1-like protein; AltName: Full=Protein A-SCID	21.4	779	11%	1316	100%
P42167.2	RecName: Full=Lamina-associated polypeptide 2, isoforms beta/gamma; AltName: Full=Thymopoietin, isoforms beta/gamma; Short=TP beta/gamma; AltName: Full=Thymopoietin-related peptide isoforms beta/gamma; Short=TPRP isoforms beta/gamma; Contains: RecName: Full=Thymopoietin; Short=TP; AltName: Full=Splenin; Contains: RecName: Full=Thymopentin; AltName: Full=TP5	21.4	492	6%	1316	100%
P15529.3	RecName: Full=Membrane cofactor protein; AltName: Full=Trophoblast leukocyte common antigen; AltName: Full=TLX; AltName: CD_antigen=CD46; Flags: Precursor	21.4	397	5%	1316	100%
1FQV_B	Chain B, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|D Chain D, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|F Chain F, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|H Chain H, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|J Chain J, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|L Chain L, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|N Chain N, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FQV\|P Chain P, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex	21.4	139	2%	1316	80%
NP_001077008.1	killer cell immunoglobulin-like receptor 3DS1 [Homo sapiens]	21.4	392	6%	1316	100%
NP_002342.1	SH2 domain-containing protein 1A isoform 1 [Homo sapiens] >sp\|O60880.1\|SH21A_HUMAN RecName: Full=SH2 domain-containing protein 1A; AltName: Full=Signaling lymphocytic activation molecule-associated protein; Short=SLAM-associated protein; AltName: Full=T-cell signal transduction molecule SAP; AltName: Full=Duncan disease SH2-protein >pdb\|1KA6\|A Chain A, SapSH2D1A BOUND TO PEPTIDE N-Py >pdb\|1KA7\|A Chain A, SapSH2D1A BOUND TO PEPTIDE N-Y-C	21.4	74.2	1%	1316	71%
1HDM_A	Chain A, Histocompatibility Antigen Hla-Dm	21.4	267	4%	1316	83%
1MCC_A	Chain A, Principles And Pitfalls In Designing Site Directed Peptide Ligands >pdb\|1MCC\|B Chain B, Principles And Pitfalls In Designing Site Directed Peptide Ligands >pdb\|1MCI\|A Chain A, Principles And Pitfalls In Designing Site Directed Peptide Ligands >pdb\|1MCI\|B Chain B, Principles And Pitfalls In Designing Site Directed Peptide Ligands >pdb\|1MCN\|A Chain A, Principles And Pitfalls In Designing Site Directed Peptide Ligands >pdb\|1MCN\|B Chain B, Principles And Pitfalls In Designing Site Directed Peptide Ligands	21.4	176	2%	1316	80%
Q92854.1	RecName: Full=Semaphorin-4D; AltName: Full=BB18; AltName: Full=A8; AltName: Full=GR3; AltName: CD_antigen=CD100; Flags: Precursor	21.4	621	8%	1316	100%
NP_116260.2	tumor necrosis factor receptor superfamily member 19L precursor [Homo sapiens] >ref\|NP_689408.1\| tumor necrosis factor receptor superfamily member 19L precursor [Homo sapiens]	21.4	387	4%	1316	100%
1BVK_A	Chain A, Humanized Anti-Lysozyme Fv Complexed With Lysozyme >pdb\|1BVK\|D Chain D, Humanized Anti-Lysozyme Fv Complexed With Lysozyme	21.4	175	2%	1316	100%
CAB51719.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.4	125	1%	1316	100%
P01893.2	RecName: Full=Putative HLA class I histocompatibility antigen, alpha chain H; AltName: Full=HLA-AR; AltName: Full=HLA-12.4; Flags: Precursor	21.4	385	6%	1316	100%
B0I1T2.1	RecName: Full=Myosin-Ig; Contains: RecName: Full=Minor histocompatibility antigen HA-2; Short=mHag HA-2	21.4	785	11%	1316	100%
NP_777567.1	serine/threonine-protein phosphatase 4 regulatory subunit 2 [Homo sapiens] >sp\|Q9NY27.3\|PP4R2_HUMAN RecName: Full=Serine/threonine-protein phosphatase 4 regulatory subunit 2	20.6	375	6%	1540	83%
NP_003114.1	leukosialin precursor [Homo sapiens] >ref\|NP_001025459.1\| leukosialin precursor [Homo sapiens] >sp\|P16150.1\|LEUK_HUMAN RecName: Full=Leukosialin; AltName: Full=Leukocyte sialoglycoprotein; AltName: Full=Sialophorin; AltName: Full=Galactoglycoprotein; Short=GALGP; AltName: CD_antigen=CD43; Flags: Precursor	19.7	281	3%	1559	100%
NP_036394.1	heparan sulfate 2-O-sulfotransferase 1 isoform 1 [Homo sapiens]	21.0	419	5%	1765	100%
CAA66155.1	immunoglobulin light chain [Homo sapiens]	19.7	173	3%	1642	83%
1B0W_A	Chain A, Structural Comparison Of Amyloidogenic Light Chain Dimer In Two Crystal Forms With Nonamyloidogenic Counterparts >pdb\|1B0W\|B Chain B, Structural Comparison Of Amyloidogenic Light Chain Dimer In Two Crystal Forms With Nonamyloidogenic Counterparts >pdb\|1B0W\|C Chain C, Structural Comparison Of Amyloidogenic Light Chain Dimer In Two Crystal Forms With Nonamyloidogenic Counterparts	20.6	124	3%	2369	100%
1QP1_A	Chain A, Kappa Variable Light Chain >pdb\|1QP1\|B Chain B, Kappa Variable Light Chain >pdb\|1QP1\|C Chain C, Kappa Variable Light Chain	20.6	124	3%	2369	100%
NP_061127.1	myoneurin isoform A [Homo sapiens] >ref\|NP_001172047.1\| myoneurin isoform A [Homo sapiens]	20.2	477	8%	3178	100%
NP_001172048.1	myoneurin isoform B [Homo sapiens]	19.3	441	7%	1757	100%
NP_001180251.1	inhibitor of nuclear factor kappa-B kinase subunit epsilon isoform 2 [Homo sapiens]	21.0	670	8%	1765	100%
3MLW_H	Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 1006-15d In Complex With An Mn V3 Peptide >pdb\|3MLW\|I Chain I, Crystal Structure Of Anti-Hiv-1 V3 Fab 1006-15d In Complex With An Mn V3 Peptide	21.0	204	3%	1765	85%
NP_001177945.1	inactive caspase-12 [Homo sapiens]	21.0	338	4%	1765	100%
3MV7_D	Chain D, Crystal Structure Of The Tk3 Tcr In Complex With Hla-B3501 >pdb\|3MV8\|D Chain D, Crystal Structure Of The Tk3-Gln55his Tcr In Complex With Hl B3501HPVG >pdb\|3MV9\|D Chain D, Crystal Structure Of The Tk3-Gln55ala Tcr In Complex With Hl B3501HPVG	21.0	225	2%	1765	100%
3MFF_A	Chain A, 1f1e8hu Tcr >pdb\|3MFF\|C Chain C, 1f1e8hu Tcr	21.0	241	3%	1765	100%
3LQZ_B	Chain B, Crystal Structure Of Hla-Dp2	21.0	209	3%	1765	80%
3LQA_C	Chain C, Crystal Structure Of Clade C Gp120 In Complex With Scd4 And	21.0	230	2%	1765	100%
3KYM_B	Chain B, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|D Chain D, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|F Chain F, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|H Chain H, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|J Chain J, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|L Chain L, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|N Chain N, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|P Chain P, Crystal Structure Of Li33 Igg2 Di-Fab	21.0	207	3%	1765	100%
3KYK_H	Chain H, Crystal Structure Of Li33 Igg1 Fab	21.0	222	4%	1765	100%
NP_001166986.1	TYRO protein tyrosine kinase-binding protein isoform 4 precursor [Homo sapiens]	21.0	155	2%	1765	100%
NP_001166985.1	TYRO protein tyrosine kinase-binding protein isoform 3 precursor [Homo sapiens]	21.0	155	2%	1765	100%
2X4Q_B	Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4Q\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4S\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peptide Representing The Epitope Of The H5n1 (Avian Flu) Nucleoprotein >pdb\|2X4S\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peptide Representing The Epitope Of The H5n1 (Avian Flu) Nucleoprotein >pdb\|2X4T\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peiodate-Cleavable Peptide >pdb\|2X4T\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peiodate-Cleavable Peptide	21.0	89.3	1%	1765	80%
NP_001159818.3	myoD family inhibitor domain-containing protein isoform c [Homo sapiens]	21.0	157	2%	1765	100%
3JUY_B	Chain B, Crystal Structure Of A 3b3 Variant, A Broadly Neutralizing Hiv-1 Scfv Antibody >pdb\|3JUY\|A Chain A, Crystal Structure Of A 3b3 Variant, A Broadly Neutralizing Hiv-1 Scfv Antibody >pdb\|3JUY\|C Chain C, Crystal Structure Of A 3b3 Variant, A Broadly Neutralizing Hiv-1 Scfv Antibody >pdb\|3JUY\|E Chain E, Crystal Structure Of A 3b3 Variant, A Broadly Neutralizing Hiv-1 Scfv Antibody >pdb\|3JUY\|F Chain F, Crystal Structure Of A 3b3 Variant, A Broadly Neutralizing Hiv-1 Scfv Antibody >pdb\|3JUY\|D Chain D, Crystal Structure Of A 3b3 Variant, A Broadly Neutralizing Hiv-1 Scfv Antibody	21.0	208	3%	1765	100%
ACN63215.1	B cell antibody heavy chain variable region [Homo sapiens]	21.0	213	2%	1765	100%
CBF35739.1	MHC class II antigen [Homo sapiens]	21.0	304	3%	1765	83%
CBF35736.1	MHC class II antigen [Homo sapiens]	21.0	272	3%	1765	83%
3GSN_A	Chain A, Crystal Structure Of The Public Ra14 Tcr In Complex With The Hcmv Dominant NlvHLA-A2 Epitope	21.0	307	4%	1765	100%
3HUJ_E	Chain E, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor >pdb\|3HUJ\|G Chain G, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor	21.0	211	2%	1765	100%
3HG1_D	Chain D, Germline-Governed Recognition Of A Cancer Epitope By An Immunodominant Human T Cell Receptor	21.0	140	1%	1765	100%
ACJ26775.1	immunoglobulin-like transcript 5 antigenic variant 2 [Homo sapiens]	21.0	560	7%	1765	100%
ACJ37278.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	21.0	118	2%	1765	100%
ACJ37266.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	21.0	102	1%	1765	85%
ACJ37247.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	21.0	123	2%	1765	85%
NP_001138381.1	C-type lectin domain family 4 member M isoform 9 [Homo sapiens]	21.0	420	4%	1765	83%
NP_001138377.1	C-type lectin domain family 4 member M isoform 12 [Homo sapiens]	21.0	474	4%	1765	83%
NP_001138376.1	C-type lectin domain family 4 member M isoform 2 [Homo sapiens]	21.0	439	3%	1765	83%
NP_001138380.1	C-type lectin domain family 4 member M isoform 10 [Homo sapiens]	21.0	249	2%	1765	83%
3FFC_E	Chain E, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR >pdb\|3FFC\|J Chain J, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR	21.0	280	4%	1765	100%
NP_001135945.1	fas apoptotic inhibitory molecule 3 isoform b [Homo sapiens]	21.0	375	5%	1765	100%
Q8N423.3	RecName: Full=Leukocyte immunoglobulin-like receptor subfamily B member 2; Short=Leukocyte immunoglobulin-like receptor 2; Short=LIR-2; AltName: Full=Immunoglobulin-like transcript 4; Short=ILT-4; AltName: Full=Monocyte/macrophage immunoglobulin-like receptor 10; Short=MIR-10; AltName: Full=CD85 antigen-like family member D; AltName: CD_antigen=CD85d; Flags: Precursor	21.0	675	9%	1765	100%
3CIQ_A	Chain A, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|B Chain B, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|C Chain C, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|D Chain D, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|E Chain E, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|F Chain F, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|G Chain G, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|H Chain H, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|I Chain I, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|J Chain J, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|K Chain K, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold >pdb\|3CIQ\|L Chain L, A Regulatable Switch Mediates Self-Association In An Immunoglobulin Fold	21.0	73.0	0%	1765	80%
CAR62543.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.0	57.5	0%	1765	85%
CAR63009.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.0	52.4	1%	1765	80%
CAR62951.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.0	70.4	0%	1765	80%
CAR62945.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.0	105	1%	1765	100%
CAR62943.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.0	195	3%	1765	80%
CAR62616.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.0	140	2%	1765	100%
CAR62584.1	immunoglobulin lambda chain variable region [Homo sapiens]	21.0	85.1	1%	1765	80%
CAR62560.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.0	125	1%	1765	100%
3DGG_A	Chain A, Crystal Structure Of Fabox108 >pdb\|3DGG\|C Chain C, Crystal Structure Of Fabox108	21.0	326	4%	1765	100%
3BZF_B	Chain B, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZF\|D Chain D, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E	21.0	106	2%	1765	80%
2RMJ_A	Chain A, Solution Structure Of Rig-I C-Terminal Domain >pdb\|3NCU\|A Chain A, Structural And Functional Insights Into Pattern Recognition By The Innate Immune Receptor Rig-I >pdb\|3NCU\|B Chain B, Structural And Functional Insights Into Pattern Recognition By The Innate Immune Receptor Rig-I	21.0	91.0	1%	1765	100%
ACA28839.1	T cell receptor variable alpha 3 chain [Homo sapiens]	21.0	226	3%	1765	100%
Q99467.2	RecName: Full=CD180 antigen; AltName: Full=Lymphocyte antigen 64; AltName: Full=Radioprotective 105 kDa protein; AltName: CD_antigen=CD180; Flags: Precursor	21.0	701	9%	1765	100%
2VLJ_D	Chain D, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLK\|D Chain D, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLM\|D Chain D, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|D Chain D, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|I Chain I, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain	21.0	231	4%	1765	100%
2RCJ_A	Chain A, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|B Chain B, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|E Chain E, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|F Chain F, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|I Chain I, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|J Chain J, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|M Chain M, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|N Chain N, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|Q Chain Q, Solution Structure Of Human Immunoglobulin M >pdb\|2RCJ\|R Chain R, Solution Structure Of Human Immunoglobulin M	21.0	244	4%	1765	83%
2NNA_B	Chain B, Structure Of The Mhc Class Ii Molecule Hla-Dq8 Bound With A Deamidated Gluten Peptide	21.0	242	3%	1765	83%
2O49_A	Chain A, Crystal Structure Of The N-Terminal Cut Domain Of Satb1 Bound To Matrix Attachment Region Dna >pdb\|2O4A\|A Chain A, Crystal Structure Of The N-Terminal Cut Domain Of Satb1 Bound To Matrix Attachment Region Dna	21.0	127	1%	1765	100%
2GTJ_A	Chain A, Reduced Form Of Adap Hsh3-N-Domain >pdb\|2GTO\|A Chain A, Oxidized Form Of Adap Hsh3-N	21.0	141	1%	1765	83%
2PO6_C	Chain C, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain >pdb\|2PO6\|G Chain G, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain	21.0	211	2%	1765	100%
ABR67886.1	T cell receptor delta chain variable region [Homo sapiens]	21.0	21.0	0%	1765	100%
ABR37260.1	T-cell receptor beta chain [Homo sapiens]	21.0	91.8	1%	1765	100%
2H3N_B	Chain B, Crystal Structure Of A Surrogate Light Chain (Lambda5 And Vpreb) Homodimer >pdb\|2H3N\|D Chain D, Crystal Structure Of A Surrogate Light Chain (Lambda5 And Vpreb) Homodimer	21.0	90.1	1%	1765	80%
2H32_B	Chain B, Crystal Structure Of The Pre-B Cell Receptor	21.0	90.1	1%	1765	80%
2IAL_A	Chain A, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAL\|C Chain C, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAM\|C Chain C, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|D Chain D, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|I Chain I, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|N Chain N, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|S Chain S, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr	21.0	242	3%	1765	100%
NP_002340.2	lymphocyte antigen 75 precursor [Homo sapiens]	21.0	1537	17%	1765	100%
3JWD_C	Chain C, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility >pdb\|3JWD\|D Chain D, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility >pdb\|3JWO\|C Chain C, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility	21.0	230	2%	1765	100%
NP_001074447.1	leukocyte immunoglobulin-like receptor subfamily B member 2 isoform 2 [Homo sapiens]	21.0	656	9%	1765	100%
NP_001121683.1	nudC domain-containing protein 1 isoform 2 [Homo sapiens]	21.0	658	10%	1765	100%
EAW85618.1	splA/ryanodine receptor domain and SOCS box containing 3, isoform CRA_a [Homo sapiens]	21.0	274	3%	1765	100%
NP_116258.2	nudC domain-containing protein 1 isoform 1 [Homo sapiens] >sp\|Q96RS6.2\|NUDC1_HUMAN RecName: Full=NudC domain-containing protein 1; AltName: Full=Chronic myelogenous leukemia tumor antigen 66; AltName: Full=Tumor antigen CML66	21.0	675	10%	1765	100%
EAW55191.1	lymphocyte antigen 86, isoform CRA_a [Homo sapiens]	21.0	162	2%	1765	100%
NP_001138378.1	C-type lectin domain family 4 member M isoform 7 [Homo sapiens]	21.0	330	3%	1765	83%
NP_391988.1	integrin beta-1 isoform 1D precursor [Homo sapiens]	21.0	655	10%	1765	100%
NP_003808.2	disintegrin and metalloproteinase domain-containing protein 7 precursor [Homo sapiens]	21.0	851	10%	1765	100%
ABG38449.1	immunglobulin heavy chain variable region [Homo sapiens]	21.0	141	2%	1765	100%
ABG38450.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38451.1\| immunglobulin heavy chain variable region [Homo sapiens]	21.0	124	1%	1765	100%
ABG38444.1	immunglobulin heavy chain variable region [Homo sapiens]	21.0	163	2%	1765	100%
ABG38413.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	127	2%	1765	85%
ABG38390.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	127	1%	1765	85%
ABG38421.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	108	1%	1765	85%
ABG38411.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	109	1%	1765	85%
ABG38345.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	93.5	1%	1765	85%
ABG38347.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
ABG38373.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
ABG38368.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	71.7	1%	1765	85%
ABG38344.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	71.3	1%	1765	85%
ABG38375.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
ABG38364.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
2BC4_B	Chain B, Crystal Structure Of Hla-Dm >pdb\|2BC4\|D Chain D, Crystal Structure Of Hla-Dm	21.0	251	3%	1765	83%
2F53_B	Chain B, Directed Evolution Of Human T-Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Apparent Cross-Reactivity >pdb\|2P5E\|B Chain B, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry >pdb\|2P5W\|B Chain B, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry >pdb\|2PYE\|B Chain B, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Revealnative Diagonal Binding Geometry Tcr Clone C5c1 Complexed With Mhc	21.0	106	2%	1765	80%
2EYR_A	Chain A, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION >pdb\|2EYS\|A Chain A, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION >pdb\|2EYT\|A Chain A, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION >pdb\|2EYT\|C Chain C, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION	21.0	211	2%	1765	100%
2F8O_A	Chain A, A Native To Amyloidogenic Transition Regulated By A Backbone Trigger >pdb\|2F8O\|B Chain B, A Native To Amyloidogenic Transition Regulated By A Backbone Trigger	21.0	106	2%	1765	80%
2ERJ_C	Chain C, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2 >pdb\|2ERJ\|G Chain G, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2	21.0	187	2%	1765	100%
NP_001019241.1	GTP cyclohydrolase 1 isoform 2 [Homo sapiens]	21.0	321	5%	1765	100%
NP_060049.2	deleted in malignant brain tumors 1 protein isoform c precursor [Homo sapiens]	21.0	1800	11%	1765	100%
NP_004397.2	deleted in malignant brain tumors 1 protein isoform a precursor [Homo sapiens]	21.0	1448	11%	1765	100%
NP_996537.3	myelin-oligodendrocyte glycoprotein isoform alpha5 precursor [Homo sapiens]	21.0	280	4%	1765	100%
NP_006228.3	POU domain, class 4, transcription factor 1 [Homo sapiens]	21.0	327	4%	1765	100%
NP_443723.2	ankyrin repeat domain-containing protein 30A [Homo sapiens]	21.0	1241	14%	1765	100%
NP_659458.2	E3 ubiquitin-protein ligase MARCH8 isoform 8 [Homo sapiens] >ref\|NP_001002265.1\| E3 ubiquitin-protein ligase MARCH8 isoform 6 [Homo sapiens] >ref\|NP_001002266.1\| E3 ubiquitin-protein ligase MARCH8 isoform 7 [Homo sapiens] >sp\|Q5T0T0.1\|MARH8_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH8; AltName: Full=Membrane-associated RING finger protein 8; AltName: Full=Membrane-associated RING-CH protein VIII; Short=MARCH-VIII; AltName: Full=RING finger protein 178; AltName: Full=Cellular modulator of immune recognition; Short=c-MIR >dbj\|BAG36144.1\| unnamed protein product [Homo sapiens]	21.0	251	3%	1765	85%
NP_001136269.1	C-X-C chemokine receptor type 3 isoform B [Homo sapiens]	21.0	435	7%	1765	100%
NP_663778.1	TNF receptor-associated factor 3 isoform 2 [Homo sapiens]	21.0	340	4%	1765	100%
NP_006153.2	nuclear factor of activated T-cells, cytoplasmic 1 isoform B [Homo sapiens]	21.0	643	9%	1765	100%
CAB56155.1	DMBT1/8kb.2 protein [Homo sapiens]	21.0	1840	11%	1765	100%
NP_065909.1	semaphorin-6D isoform 1 precursor [Homo sapiens]	21.0	833	12%	1765	100%
NP_056652.1	ficolin-2 isoform b precursor [Homo sapiens]	21.0	188	2%	1765	80%
O95936.3	RecName: Full=Eomesodermin homolog; AltName: Full=T-box brain protein 2; Short=T-brain-2; Short=TBR-2	21.0	609	8%	1765	100%
NP_001077061.1	tyrosine-protein kinase transmembrane receptor ROR1 isoform 2 [Homo sapiens]	21.0	433	5%	1765	100%
NP_002958.2	scaffold attachment factor B1 [Homo sapiens]	21.0	827	12%	1765	100%
NP_434701.1	caspase recruitment domain-containing protein 9 isoform 2 [Homo sapiens]	21.0	301	3%	1765	100%
NP_705869.1	semaphorin-6D isoform 2 precursor [Homo sapiens]	21.0	814	12%	1765	100%
NP_705870.1	semaphorin-6D isoform 3 precursor [Homo sapiens]	21.0	814	12%	1765	100%
NP_002202.2	integrin beta-1 isoform 1A precursor [Homo sapiens] >ref\|NP_596867.1\| integrin beta-1 isoform 1A precursor [Homo sapiens]	21.0	669	10%	1765	100%
NP_066295.3	protein SSX5 isoform a [Homo sapiens]	21.0	293	3%	1765	85%
NP_005003.2	tyrosine-protein kinase transmembrane receptor ROR1 isoform 1 [Homo sapiens]	21.0	958	12%	1765	100%
AAK38154.1	mitochondria solute carrier protein [Homo sapiens]	21.0	220	2%	1765	100%
AAM69373.1	chronic myelogenous leukemia tumor antigen 66 short form [Homo sapiens]	21.0	637	9%	1765	100%
CAC44122.1	DMBT1/8kb.2 protein [Homo sapiens]	21.0	1832	11%	1765	100%
NP_055034.2	killer cell immunoglobulin-like receptor 2DL2 precursor [Homo sapiens]	21.0	546	6%	1765	100%
NP_005615.2	C-C motif chemokine 25 precursor [Homo sapiens]	21.0	161	1%	1765	100%
NP_783729.1	protein SSX5 isoform b [Homo sapiens]	21.0	229	3%	1765	85%
NP_006335.2	C-type lectin domain family 10 member A isoform 2 [Homo sapiens]	21.0	199	2%	1765	100%
CAB63941.1	DMBT1 prototype [Homo sapiens]	21.0	1830	11%	1765	100%
NP_005865.2	leukocyte immunoglobulin-like receptor subfamily B member 2 isoform 1 [Homo sapiens]	21.0	656	9%	1765	100%
NP_001007470.1	hematopoietic cell signal transducer isoform 2 precursor [Homo sapiens]	21.0	191	2%	1765	100%
NP_765976.1	nuclear factor of activated T-cells, cytoplasmic 1 isoform D [Homo sapiens]	21.0	246	5%	1765	83%
AAL04518.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	21.0	55.8	0%	1765	75%
AAC41702.1	interferon-beta [Homo sapiens]	21.0	326	4%	1765	100%
NP_110393.1	apoptosis facilitator Bcl-2-like protein 14 isoform 2 [Homo sapiens]	21.0	295	4%	1765	100%
NP_001138382.1	C-type lectin domain family 4 member M isoform 8 [Homo sapiens]	21.0	474	4%	1765	83%
AAC41993.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	21.0	141	2%	1765	80%
AAC43025.1	anti-mucin1 light chain variable region [Homo sapiens]	21.0	143	2%	1765	83%
AAA36078.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	21.0	230	3%	1765	83%
AAC68895.1	envelope protein RIC-3 [Homo sapiens]	21.0	186	2%	1765	100%
AAC41984.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	21.0	119	2%	1765	80%
AAL47718.1	herpesvirus entry mediator [Homo sapiens]	21.0	147	2%	1765	100%
NP_765977.1	nuclear factor of activated T-cells, cytoplasmic 1 isoform E [Homo sapiens]	21.0	626	9%	1765	100%
AAA59651.1	complement component C4B [Homo sapiens]	21.0	498	6%	1765	100%
NP_001138379.1	C-type lectin domain family 4 member M isoform 11 [Homo sapiens]	21.0	456	4%	1765	83%
NP_002655.2	pleckstrin [Homo sapiens]	21.0	346	4%	1765	100%
NP_079516.1	CD276 antigen isoform b [Homo sapiens]	21.0	290	3%	1765	100%
AAC41988.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	21.0	119	2%	1765	80%
ABG38391.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
AAZ32309.1	immunoglobulin kappa light chain [Homo sapiens]	21.0	156	2%	1765	100%
AAY57072.1	immunoglobulin heavy chain variable region [Homo sapiens]	21.0	104	1%	1765	100%
AAY33473.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.0	120	2%	1765	83%
AAY33425.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
AAY33435.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.0	91.4	1%	1765	85%
AAY33397.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.0	105	1%	1765	100%
AAY33354.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.0	110	1%	1765	85%
AAY33240.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.0	157	2%	1765	100%
AAY33341.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	21.0	127	2%	1765	85%
AAY33261.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.0	122	1%	1765	80%
AAY33200.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.0	87.2	1%	1765	100%
AAY33309.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.0	102	1%	1765	100%
AAY33236.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.0	122	1%	1765	80%
AAY33336.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	21.0	87.6	1%	1765	100%
NP_001107849.1	forkhead box protein P3 isoform b [Homo sapiens]	21.0	345	5%	1765	100%
AAY16611.1	immunoglobulin lambda light chain [Homo sapiens]	21.0	125	1%	1765	100%
AAY16617.1	immunoglobulin kappa light chain [Homo sapiens]	21.0	171	3%	1765	80%
AAY16639.1	immunoglobulin kappa light chain [Homo sapiens]	21.0	109	1%	1765	85%
AAY16622.1	immunoglobulin lambda light chain [Homo sapiens]	21.0	120	1%	1765	100%
NP_998759.1	transcription factor RFX4 isoform c [Homo sapiens]	21.0	846	10%	1765	100%
NP_055033.2	killer cell immunoglobulin-like receptor 2DL1 [Homo sapiens]	21.0	516	6%	1765	100%
NP_604389.1	DNA-binding protein RFXANK isoform b [Homo sapiens]	21.0	206	2%	1765	83%
NP_005534.2	insulin-like 3 precursor [Homo sapiens]	21.0	193	2%	1765	100%
NP_115880.2	transcription factor RFX4 isoform a [Homo sapiens]	21.0	695	9%	1765	100%
AAL04531.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	21.0	109	1%	1765	83%
NP_060140.2	ubiquitin thioesterase OTUB1 [Homo sapiens]	21.0	308	4%	1765	100%
AAK73017.1	chronic myelogenous leukemia tumor antigen 66 [Homo sapiens]	21.0	654	10%	1765	100%
AAA73002.1	unnamed protein product [Homo sapiens]	21.0	426	4%	1765	100%
3BHB_B	Chain B, Crystal Structure Of Kmd Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3D25\|B Chain B, Crystal Structure Of Ha-1 Minor Histocompatibility Antigen Bound To Human Class I Mhc Hla-A2 >pdb\|3FQN\|B Chain B, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQR\|B Chain B, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQT\|B Chain B, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQU\|B Chain B, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQW\|B Chain B, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQX\|B Chain B, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes	21.0	106	2%	1765	80%
NP_005440.1	fas apoptotic inhibitory molecule 3 isoform a [Homo sapiens] >sp\|O60667.1\|FAIM3_HUMAN RecName: Full=Fas apoptotic inhibitory molecule 3; AltName: Full=Regulator of Fas-induced apoptosis Toso; Flags: Precursor	21.0	447	5%	1765	100%
NP_068569.2	acidic mammalian chitinase isoform a [Homo sapiens]	21.0	273	3%	1765	100%
NP_004409.1	dual specificity protein phosphatase 2 [Homo sapiens]	21.0	311	4%	1765	100%
1YSE_A	Chain A, Solution Structure Of The Mar-Binding Domain Of Satb1	21.0	260	3%	1765	100%
2AK4_D	Chain D, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|I Chain I, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|N Chain N, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|T Chain T, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide	21.0	175	2%	1765	100%
2AK4_E	Chain E, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|J Chain J, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|P Chain P, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|U Chain U, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide	21.0	138	1%	1765	100%
Q33E94.1	RecName: Full=Transcription factor RFX4; AltName: Full=Regulatory factor X 4; AltName: Full=Testis development protein NYD-SP10 >dbj\|BAE48232.1\| regulatory factor X4, isoform d [Homo sapiens]	21.0	846	10%	1765	100%
BAE48238.1	regulatory factor X4 isoform F [Homo sapiens]	21.0	416	5%	1765	100%
BAE48237.1	regulatory factor X4 isoform E [Homo sapiens]	21.0	432	5%	1765	100%
2AW2_A	Chain A, Crystal Structure Of The Human Btla-Hvem Complex >pdb\|2AW2\|X Chain X, Crystal Structure Of The Human Btla-Hvem Complex	21.0	139	1%	1765	100%
1XR8_A	Chain A, Crystal Structures Of Hla-B1501 In Complex With Peptides From Human Ubch6 And Epstein-Barr Virus Ebna-3 >pdb\|1XR9\|A Chain A, Crystal Structures Of Hla-B1501 In Complex With Peptides From Human Ubch6 And Epstein-Barr Virus Ebna-3 >pdb\|3C9N\|A Chain A, Crystal Structure Of A Sars Corona Virus Derived Peptide Bound To The Human Major Histocompatibility Complex Class I Molecule Hla-B1501	21.0	183	2%	1765	100%
1YPZ_B	Chain B, Immune Receptor >pdb\|1YPZ\|D Chain D, Immune Receptor	21.0	106	2%	1765	80%
1XPH_A	Chain A, Structure Of Dc-Signr And A Portion Of Repeat Domain 8	21.0	207	2%	1765	83%
1YCK_A	Chain A, Crystal Structure Of Human Peptidoglycan Recognition Protein (Pgrp-S)	21.0	282	4%	1765	100%
NP_015568.2	deleted in malignant brain tumors 1 protein isoform b precursor [Homo sapiens] >sp\|Q9UGM3.2\|DMBT1_HUMAN RecName: Full=Deleted in malignant brain tumors 1 protein; AltName: Full=Glycoprotein 340; Short=Gp-340; AltName: Full=Surfactant pulmonary-associated D-binding protein; AltName: Full=Hensin; AltName: Full=Salivary agglutinin; Short=SAG; Flags: Precursor	21.0	1815	11%	1765	100%
1N0X_H	Chain H, Crystal Structure Of A Broadly Neutralizing Anti-Hiv-1 Antibody In Complex With A Peptide Mimotope >pdb\|1N0X\|K Chain K, Crystal Structure Of A Broadly Neutralizing Anti-Hiv-1 Antibody In Complex With A Peptide Mimotope	21.0	192	3%	1765	100%
CAG29716.1	immunoglobulin heavy chain [Homo sapiens]	21.0	69.6	0%	1765	100%
CAG29714.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62727.1\| immunoglobulin heavy chain variable region [Homo sapiens]	21.0	103	1%	1765	100%
1S9V_B	Chain B, Crystal Structure Of Hla-Dq2 Complexed With Deamidated Gliadin Peptide >pdb\|1S9V\|E Chain E, Crystal Structure Of Hla-Dq2 Complexed With Deamidated Gliadin Peptide	21.0	256	3%	1765	80%
2ZKH_L	Chain L, Human Thrombopoietin Neutralizing Antibody Tn1 Fab	21.0	334	4%	1765	100%
1OEY_A	Chain A, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase >pdb\|1OEY\|B Chain B, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase >pdb\|1OEY\|C Chain C, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase >pdb\|1OEY\|D Chain D, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase	21.0	93.5	0%	1765	100%
1UCT_A	Chain A, Crystal Structure Of The Extracellular Fragment Of Fc Alpha Receptor I (Cd89)	21.0	193	2%	1765	85%
ACR09653.1	galectin-17A precursor transcription variant 1 [Homo sapiens] >gb\|ACR09654.1\| galectin-17A precursor transcription variant 2 [Homo sapiens]	21.0	231	3%	1765	80%
1OGA_D	Chain D, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition	21.0	231	4%	1765	100%
1OVZ_A	Chain A, Crystal Structure Of Human Fcari >pdb\|1OVZ\|B Chain B, Crystal Structure Of Human Fcari >pdb\|1OW0\|C Chain C, Crystal Structure Of Human Fcari Bound To Iga1-Fc >pdb\|1OW0\|D Chain D, Crystal Structure Of Human Fcari Bound To Iga1-Fc	21.0	175	2%	1765	85%
CAD89236.1	immunoglobulin heavy chain [Homo sapiens]	21.0	170	1%	1765	100%
CAD88758.1	immunoglobulin heavy chain [Homo sapiens]	21.0	124	1%	1765	100%
CAD88695.1	immunoglobulin kappa light chain variable region [Homo sapiens]	21.0	121	1%	1765	85%
CAD88667.1	immunoglobulin heavy chain [Homo sapiens]	21.0	132	2%	1765	85%
CAD88715.1	immunoglobulin lambda light chain variable region [Homo sapiens]	21.0	140	2%	1765	83%
CAD88719.1	immunoglobulin lambda light chain variable region [Homo sapiens]	21.0	41.1	0%	1765	85%
CAD88723.1	immunoglobulin lambda light chain variable region [Homo sapiens]	21.0	94.8	1%	1765	85%
CAC03827.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.1	0%	1765	80%
CAC03921.1	T-cell receptor beta chain [Homo sapiens]	21.0	90.6	1%	1765	100%
NP_055154.3	interleukin-17 receptor A precursor [Homo sapiens]	21.0	913	12%	1765	100%
1KTK_E	Chain E, Complex Of Streptococcal Pyrogenic Enterotoxin C (Spec) With A Human T Cell Receptor Beta Chain (Vbeta2.1) >pdb\|1KTK\|F Chain F, Complex Of Streptococcal Pyrogenic Enterotoxin C (Spec) With A Human T Cell Receptor Beta Chain (Vbeta2.1)	21.0	252	3%	1765	83%
CAB59408.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	54.9	1%	1765	100%
P32121.2	RecName: Full=Beta-arrestin-2; AltName: Full=Arrestin beta-2	21.0	380	4%	1765	100%
CAC03787.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
CAB46480.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	129	2%	1765	85%
CAB59378.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	54.1	0%	1765	80%
1QRN_D	Chain D, Crystal Structure Of Human A6 Tcr Complexed With Hla-A2 Bound To Altered Htlv-1 Tax Peptide P6a	21.0	157	2%	1765	100%
NP_001019242.1	GTP cyclohydrolase 1 isoform 3 [Homo sapiens]	21.0	267	4%	1765	100%
NP_620048.1	apoptosis facilitator Bcl-2-like protein 14 isoform 1 [Homo sapiens] >ref\|NP_620049.1\| apoptosis facilitator Bcl-2-like protein 14 isoform 1 [Homo sapiens]	21.0	313	4%	1765	100%
CAC03970.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
NP_002112.3	HLA class II histocompatibility antigen, DP beta 1 chain precursor [Homo sapiens]	21.0	295	4%	1765	100%
NP_110380.1	proto-oncogene Wnt-3 precursor [Homo sapiens]	21.0	264	3%	1765	100%
NP_061821.1	ERBB receptor feedback inhibitor 1 [Homo sapiens]	21.0	539	8%	1765	100%
NP_848545.1	E3 ubiquitin-protein ligase MARCH3 [Homo sapiens]	21.0	278	3%	1765	100%
NP_001138383.1	C-type lectin domain family 4 member M isoform 3 [Homo sapiens]	21.0	358	2%	1765	83%
NP_000407.1	interferon gamma receptor 1 precursor [Homo sapiens]	21.0	453	5%	1765	100%
CAC48312.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
P61769.1	RecName: Full=Beta-2-microglobulin; Contains: RecName: Full=Beta-2-microglobulin form pI 5.3; Flags: Precursor >gb\|ABB01003.1\| beta-2-microglobin [Homo sapiens]	21.0	124	2%	1765	80%
NP_066961.2	TNF receptor-associated factor 2 [Homo sapiens]	21.0	407	5%	1765	100%
CAC28012.1	immunoglobulin lambda light chain variable region [Homo sapiens]	21.0	150	2%	1765	85%
NP_004263.1	homer protein homolog 1 [Homo sapiens]	21.0	429	6%	1765	100%
NP_003291.2	TNF receptor-associated factor 3 isoform 1 [Homo sapiens] >ref\|NP_663777.1\| TNF receptor-associated factor 3 isoform 1 [Homo sapiens] >sp\|Q13114.2\|TRAF3_HUMAN RecName: Full=TNF receptor-associated factor 3; AltName: Full=CD40 receptor-associated factor 1; Short=CRAF1; AltName: Full=CD40-binding protein; Short=CD40BP; AltName: Full=LMP1-associated protein 1; Short=LAP1; AltName: Full=CAP-1	21.0	357	4%	1765	100%
1JPY_A	Chain A, Crystal Structure Of Il-17f >pdb\|1JPY\|B Chain B, Crystal Structure Of Il-17f >pdb\|1JPY\|X Chain X, Crystal Structure Of Il-17f >pdb\|1JPY\|Y Chain Y, Crystal Structure Of Il-17f	21.0	87.2	1%	1765	80%
1EXU_A	Chain A, Crystal Structure Of The Human Mhc-Related Fc Receptor >pdb\|3M17\|A Chain A, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M17\|C Chain C, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M17\|E Chain E, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M17\|G Chain G, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M1B\|A Chain A, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib >pdb\|3M1B\|C Chain C, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib >pdb\|3M1B\|E Chain E, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib >pdb\|3M1B\|G Chain G, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib	21.0	261	3%	1765	100%
1HZH_L	Chain L, Crystal Structure Of The Intact Human Igg B12 With Broad And Potent Activity Against Primary Hiv-1 Isolates: A Template For Hiv Vaccine Design >pdb\|1HZH\|M Chain M, Crystal Structure Of The Intact Human Igg B12 With Broad And Potent Activity Against Primary Hiv-1 Isolates: A Template For Hiv Vaccine Design >pdb\|1N0X\|L Chain L, Crystal Structure Of A Broadly Neutralizing Anti-Hiv-1 Antibody In Complex With A Peptide Mimotope >pdb\|1N0X\|M Chain M, Crystal Structure Of A Broadly Neutralizing Anti-Hiv-1 Antibody In Complex With A Peptide Mimotope	21.0	243	3%	1765	100%
NP_006655.1	C-C motif chemokine 27 precursor [Homo sapiens]	21.0	86.8	1%	1765	85%
P20962.2	RecName: Full=Parathymosin	21.0	137	1%	1765	100%
CAB59419.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	57.9	0%	1765	83%
1SYX_A	Chain A, The Crystal Structure Of A Binary U5 Snrnp Complex >pdb\|1SYX\|C Chain C, The Crystal Structure Of A Binary U5 Snrnp Complex >pdb\|1SYX\|E Chain E, The Crystal Structure Of A Binary U5 Snrnp Complex	21.0	148	2%	1765	100%
P30486.1	RecName: Full=HLA class I histocompatibility antigen, B-48 alpha chain; AltName: Full=MHC class I antigen B*48; AltName: Full=Bw-48; Flags: Precursor	21.0	321	4%	1765	100%
CAC03974.1	T-cell receptor beta chain [Homo sapiens]	21.0	36.9	0%	1765	80%
CAC03865.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
NP_821080.1	tubulin beta-2B chain [Homo sapiens]	21.0	350	5%	1765	83%
CAB59373.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	70.8	1%	1765	100%
Q13501.1	RecName: Full=Sequestosome-1; AltName: Full=Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa; AltName: Full=Ubiquitin-binding protein p62; AltName: Full=EBI3-associated protein of 60 kDa; Short=EBIAP; Short=p60	21.0	423	5%	1765	100%
CAC48319.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
1QSE_D	Chain D, Structure Of Human A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide V7r >pdb\|1QSF\|D Chain D, Structure Of A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide Y8a >pdb\|2GJ6\|D Chain D, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|3D39\|D Chain D, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(4-Fluorophenylalanine)) Peptide >pdb\|3D3V\|D Chain D, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(3,4-Difluorophenylalanine)) Peptide >pdb\|3H9S\|D Chain D, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Bound Tel1p Peptide	21.0	157	2%	1765	100%
CAB48550.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	147	2%	1765	85%
NP_878910.1	C-type lectin domain family 10 member A isoform 1 [Homo sapiens] >sp\|Q8IUN9.1\|CLC10_HUMAN RecName: Full=C-type lectin domain family 10 member A; AltName: Full=C-type lectin superfamily member 14; AltName: Full=Macrophage lectin 2; AltName: CD_antigen=CD301	21.0	234	3%	1765	100%
O15204.2	RecName: Full=ADAM DEC1; AltName: Full=A disintegrin and metalloproteinase domain-like protein decysin-1; Short=ADAM-like protein decysin-1; Flags: Precursor	21.0	501	6%	1765	100%
1JK8_B	Chain B, Crystal Structure Of A Human Insulin Peptide-Hla-Dq8 Complex	21.0	242	3%	1765	83%
NP_004262.1	lymphocyte antigen 86 precursor [Homo sapiens] >sp\|O95711.1\|LY86_HUMAN RecName: Full=Lymphocyte antigen 86; Short=Ly-86; AltName: Full=Protein MD-1; Flags: Precursor >gb\|AAC98152.2\| MD-1 [Homo sapiens] >emb\|CAB76262.1\| lymphocyte antigen 86 [Homo sapiens] >gb\|AAH38846.1\| Lymphocyte antigen 86 [Homo sapiens] >gb\|EAW55192.1\| lymphocyte antigen 86, isoform CRA_b [Homo sapiens]	21.0	95.7	1%	1765	100%
CAC03969.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
CAC03890.1	T-cell receptor beta chain [Homo sapiens]	21.0	36.9	0%	1765	100%
NP_003712.1	DNA-binding protein RFXANK isoform a [Homo sapiens]	21.0	237	3%	1765	83%
CAC48310.1	T-cell receptor beta chain [Homo sapiens]	21.0	36.9	0%	1765	80%
P40763.2	RecName: Full=Signal transducer and activator of transcription 3; AltName: Full=Acute-phase response factor	21.0	912	11%	1765	100%
Q01826.1	RecName: Full=DNA-binding protein SATB1; AltName: Full=Special AT-rich sequence-binding protein 1	21.0	943	12%	1765	100%
NP_003641.3	cystatin-F precursor [Homo sapiens] >sp\|O76096.1\|CYTF_HUMAN RecName: Full=Cystatin-F; AltName: Full=Leukocystatin; AltName: Full=Cystatin-7; AltName: Full=Cystatin-like metastasis-associated protein; Short=CMAP; Flags: Precursor	21.0	151	1%	1765	100%
P18463.1	RecName: Full=HLA class I histocompatibility antigen, B-37 alpha chain; AltName: Full=MHC class I antigen B*37; Flags: Precursor	21.0	241	3%	1765	100%
NP_001495.1	C-X-C chemokine receptor type 3 isoform A [Homo sapiens]	21.0	450	7%	1765	100%
CAC03901.1	T-cell receptor beta chain [Homo sapiens]	21.0	36.9	0%	1765	100%
NP_002995.1	secreted and transmembrane protein 1 precursor [Homo sapiens]	21.0	253	3%	1765	100%
1DTJ_A	Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding Domain >pdb\|1DTJ\|B Chain B, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding Domain >pdb\|1DTJ\|C Chain C, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding Domain >pdb\|1DTJ\|D Chain D, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding Domain	21.0	142	1%	1765	100%
Q96C10.1	RecName: Full=Probable ATP-dependent RNA helicase DHX58; AltName: Full=Probable ATP-dependent helicase LGP2; AltName: Full=Protein D11Lgp2 homolog; AltName: Full=RIG-I-like receptor LGP2; Short=RLR	21.0	731	9%	1765	100%
4HCK_A	Chain A, Human Hck Sh3 Domain, Nmr, 25 Structures >pdb\|5HCK\|A Chain A, Human Hck Sh3 Domain, Nmr, Minimized Average Structure	21.0	71.7	1%	1765	80%
NP_000152.1	GTP cyclohydrolase 1 isoform 1 [Homo sapiens] >ref\|NP_001019195.1\| GTP cyclohydrolase 1 isoform 1 [Homo sapiens]	21.0	322	5%	1765	100%
CAC03894.1	T-cell receptor beta chain [Homo sapiens]	21.0	36.9	0%	1765	100%
NP_443185.1	leucine-rich repeat-containing protein 3B precursor [Homo sapiens]	21.0	261	3%	1765	100%
CAC03851.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
1HLA_M	Chain M, Structure Of The Human Class I Histocompatibility Antigen, Hla-A2	21.0	89.3	1%	1765	80%
CAC03822.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
1JL4_D	Chain D, Crystal Structure Of The Human Cd4 N-Terminal Two Domain Fragment Complexed To A Class Ii Mhc Molecule	21.0	230	2%	1765	100%
NP_005745.1	ras GTPase-activating protein-binding protein 1 [Homo sapiens] >ref\|NP_938405.1\| ras GTPase-activating protein-binding protein 1 [Homo sapiens]	21.0	452	6%	1765	100%
NP_005027.2	peroxisome proliferator-activated receptor alpha [Homo sapiens] >ref\|NP_001001928.1\| peroxisome proliferator-activated receptor alpha [Homo sapiens]	21.0	424	5%	1765	100%
Q9HC97.4	RecName: Full=G-protein coupled receptor 35; AltName: Full=Kynurenic acid receptor; Short=KYNA receptor	21.0	551	6%	1765	100%
NP_001048.2	substance-K receptor [Homo sapiens]	21.0	549	7%	1765	100%
NP_004682.2	V-type proton ATPase subunit d 1 [Homo sapiens]	21.0	301	4%	1765	83%
NP_001286.1	C-C chemokine receptor type 1 [Homo sapiens]	21.0	437	7%	1765	100%
CAB46451.1	immunoglobulin light chain variable region [Homo sapiens]	21.0	97.4	1%	1765	85%
NP_055081.1	hematopoietic cell signal transducer isoform 1 precursor [Homo sapiens] >sp\|Q9UBK5.1\|HCST_HUMAN RecName: Full=Hematopoietic cell signal transducer; AltName: Full=Transmembrane adapter protein KAP10; AltName: Full=DNAX-activation protein 10; AltName: Full=Membrane protein DAP10; Flags: Precursor	21.0	191	2%	1765	100%
NP_057686.2	C-C chemokine receptor type 10 [Homo sapiens]	21.0	386	5%	1765	100%
1JH5_A	Chain A, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|B Chain B, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|C Chain C, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|D Chain D, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|E Chain E, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|F Chain F, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|G Chain G, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|H Chain H, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|I Chain I, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1JH5\|J Chain J, Crystal Structure Of Stall-1 Of Tnf Family Ligand >pdb\|1OQD\|A Chain A, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|B Chain B, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|C Chain C, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|D Chain D, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|E Chain E, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|F Chain F, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|G Chain G, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|H Chain H, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|I Chain I, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQD\|J Chain J, Crystal Structure Of Stall-1 And Bcma >pdb\|1OQE\|A Chain A, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|B Chain B, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|C Chain C, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|D Chain D, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|E Chain E, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|F Chain F, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|G Chain G, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|H Chain H, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|I Chain I, Crystal Structure Of Stall-1 With Baff-R >pdb\|1OQE\|J Chain J, Crystal Structure Of Stall-1 With Baff-R	21.0	299	4%	1765	83%
1FYH_B	Chain B, 1:1 Complex Between An Interferon Gamma Single-Chain Variant And Its Receptor >pdb\|1FYH\|E Chain E, 1:1 Complex Between An Interferon Gamma Single-Chain Variant And Its Receptor	21.0	176	2%	1765	100%
CAB59412.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	54.9	1%	1765	100%
NP_001019907.1	CD276 antigen isoform a [Homo sapiens] >sp\|Q5ZPR3.1\|CD276_HUMAN RecName: Full=CD276 antigen; AltName: Full=Costimulatory molecule; AltName: Full=B7 homolog 3; Short=B7-H3; AltName: Full=4Ig-B7-H3; AltName: CD_antigen=CD276; Flags: Precursor	21.0	462	4%	1765	100%
NP_003922.1	wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] >ref\|NP_001020105.1\| wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] >ref\|NP_001020106.1\| wiskott-Aldrich syndrome protein family member 1 [Homo sapiens] >ref\|NP_001020107.1\| wiskott-Aldrich syndrome protein family member 1 [Homo sapiens]	21.0	871	9%	1765	100%
NP_054728.2	forkhead box protein P3 isoform a [Homo sapiens] >sp\|Q9BZS1.1\|FOXP3_HUMAN RecName: Full=Forkhead box protein P3; AltName: Full=Scurfin	21.0	345	5%	1765	100%
1HDM_B	Chain B, Histocompatibility Antigen Hla-Dm	21.0	158	2%	1765	83%
CAB59377.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	54.9	1%	1765	100%
P30464.2	RecName: Full=HLA class I histocompatibility antigen, B-15 alpha chain; AltName: Full=MHC class I antigen B*15; Flags: Precursor	21.0	268	3%	1765	100%
CAC03906.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
1ES0_B	Chain B, Crystal Structure Of The Murine Class Ii Allele I-A(G7) Complexed With The Glutamic Acid Decarboxylase (Gad65) Peptide 207-220	21.0	276	3%	1765	100%
CAC04320.1	Pellino [Homo sapiens]	21.0	507	6%	1765	100%
NP_000776.1	25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial [Homo sapiens]	21.0	439	6%	1765	100%
P07358.3	RecName: Full=Complement component C8 beta chain; AltName: Full=Complement component 8 subunit beta; Flags: Precursor	21.0	762	9%	1765	100%
CAB63942.1	DMBT1/8kb.1 protein [Homo sapiens]	21.0	1810	12%	1765	100%
1A02_J	Chain J, Structure Of The Dna Binding Domains Of Nfat, Fos And Jun Bound To Dna	21.0	87.6	1%	1765	80%
NP_000301.1	palmitoyl-protein thioesterase 1 isoform 1 precursor [Homo sapiens]	21.0	225	2%	1765	100%
CAC03976.1	T-cell receptor beta chain [Homo sapiens]	21.0	36.9	0%	1765	80%
NP_705871.1	semaphorin-6D isoform 4 precursor [Homo sapiens]	21.0	846	12%	1765	100%
CAC03776.1	T-cell receptor beta chain [Homo sapiens]	21.0	52.8	0%	1765	100%
NP_075380.1	reticulon-4 receptor precursor [Homo sapiens]	21.0	488	6%	1765	100%
CAC03910.1	T-cell receptor beta chain [Homo sapiens]	21.0	155	2%	1765	83%
NP_003811.2	tumor necrosis factor receptor superfamily member 14 precursor [Homo sapiens] >sp\|Q92956.3\|TNR14_HUMAN RecName: Full=Tumor necrosis factor receptor superfamily member 14; AltName: Full=Herpes virus entry mediator A; Short=Herpesvirus entry mediator A; Short=HveA; AltName: Full=Tumor necrosis factor receptor-like 2; Short=TR2; Flags: Precursor >gb\|AAL47717.1\|AF373877_1 herpesvirus entry mediator [Homo sapiens]	21.0	130	1%	1765	100%
CAD45087.1	T-cell receptor alpha chain [Homo sapiens]	21.0	239	3%	1765	100%
NP_055072.3	C-type lectin domain family 4 member M isoform 1 [Homo sapiens] >sp\|Q9H2X3.1\|CLC4M_HUMAN RecName: Full=C-type lectin domain family 4 member M; AltName: Full=CD209 antigen-like protein 1; AltName: Full=Dendritic cell-specific ICAM-3-grabbing non-integrin 2; Short=DC-SIGN2; AltName: Full=DC-SIGN-related protein; Short=DC-SIGNR; AltName: Full=Liver/lymph node-specific ICAM-3-grabbing non-integrin; Short=L-SIGN; AltName: CD_antigen=CD299	21.0	510	4%	1765	83%
CAC03870.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
1QRN_B	Chain B, Crystal Structure Of Human A6 Tcr Complexed With Hla-A2 Bound To Altered Htlv-1 Tax Peptide P6a >pdb\|1QR1\|B Chain B, Poor Binding Of A Her-2NEU EPITOPE (GP2) TO HLA-A2.1 Is Due To A Lack Of Interactions In The Center Of The Peptide >pdb\|1QR1\|E Chain E, Poor Binding Of A Her-2NEU EPITOPE (GP2) TO HLA-A2.1 Is Due To A Lack Of Interactions In The Center Of The Peptide >pdb\|1QSE\|B Chain B, Structure Of Human A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide V7r >pdb\|1QSF\|B Chain B, Structure Of A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide Y8a >pdb\|1I1Y\|B Chain B, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1I1Y\|E Chain E, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1I1F\|B Chain B, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1I1F\|E Chain E, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1DUY\|B Chain B, Crystal Structure Of Hla-A0201OCTAMERIC TAX PEPTIDE Complex >pdb\|1DUY\|E Chain E, Crystal Structure Of Hla-A0201OCTAMERIC TAX PEPTIDE Complex >pdb\|1DUZ\|B Chain B, Human Class I Histocompatibility Antigen (Hla-A 0201) In Complex With A Nonameric Peptide From Htlv-1 Tax Protein >pdb\|1DUZ\|E Chain E, Human Class I Histocompatibility Antigen (Hla-A 0201) In Complex With A Nonameric Peptide From Htlv-1 Tax Protein >pdb\|1EFX\|B Chain B, Structure Of A Complex Between The Human Natural Killer Cell Receptor Kir2dl2 And A Class I Mhc Ligand Hla-Cw3 >pdb\|1IM3\|B Chain B, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM3\|F Chain F, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM3\|J Chain J, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM3\|N Chain N, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM9\|B Chain B, Crystal Structure Of The Human Natural Killer Cell Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4 >pdb\|1IM9\|F Chain F, Crystal Structure Of The Human Natural Killer Cell Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4 >pdb\|1I4F\|B Chain B, Crystal Structure Of Hla-A0201MAGE-A4-Peptide Complex >pdb\|1JF1\|B Chain B, Crystal Structure Of Hla-A20201 In Complex With A Decameric Altered Peptide Ligand From The Mart-1MELAN-A >pdb\|1JHT\|B Chain B, Crystal Structure Of Hla-A20201 In Complex With A Nonameric Altered Peptide Ligand (Algigiltv) From The Mart- 1MELAN-A. >pdb\|1I7R\|B Chain B, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1058 >pdb\|1I7R\|E Chain E, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1058 >pdb\|1I7T\|B Chain B, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-5v >pdb\|1I7T\|E Chain E, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-5v >pdb\|1I7U\|B Chain B, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-6v >pdb\|1I7U\|E Chain E, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-6v >pdb\|1JNJ\|A Chain A, Nmr Solution Structure Of The Human Beta2-Microglobulin >pdb\|1LDS\|A Chain A, Crystal Structure Of Monomeric Human Beta-2-Microglobulin >pdb\|1JGE\|B Chain B, Hla-B2705 Bound To Nona-Peptide M9 >pdb\|1K5N\|B Chain B, Hla-B2709 Bound To Nona-Peptide M9 >pdb\|1KPR\|B Chain B, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1KPR\|D Chain D, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1KTL\|B Chain B, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1KTL\|D Chain D, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|1EEY\|B Chain B, Crystal Structure Determination Of Hla A2 Complexed To Peptide Gp2 With The Substitution (I2lV5LL9V) >pdb\|1EEY\|E Chain E, Crystal Structure Determination Of Hla A2 Complexed To Peptide Gp2 With The Substitution (I2lV5LL9V) >pdb\|1EEZ\|B Chain B, Crystal Structure Determination Of Hla-A2.1 Complexed To Gp2 Peptide Variant(I2lV5L) >pdb\|1EEZ\|E Chain E, Crystal Structure Determination Of Hla-A2.1 Complexed To Gp2 Peptide Variant(I2lV5L) >pdb\|1JGD\|B Chain B, Hla-B2709 Bound To Deca-Peptide S10r >pdb\|1OGA\|B Chain B, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition. >pdb\|1LP9\|B Chain B, Xenoreactive Complex Ahiii 12.2 Tcr Bound To P1049HLA-A2.1 >pdb\|1LP9\|I Chain I, Xenoreactive Complex Ahiii 12.2 Tcr Bound To P1049HLA-A2.1 >pdb\|1OF2\|B Chain B, Crystal Structure Of Hla-B2709 Complexed With The Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|1OGT\|B Chain B, Crystal Structure Of Hla-B2705 Complexed With The Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|1Q94\|B Chain B, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1Q94\|E Chain E, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1QVO\|B Chain B, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1QVO\|E Chain E, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1S9W\|B Chain B, Crystal Structure Analysis Of Ny-Eso-1 Epitope, Sllmwitqc, In Complex With Hla-A2 >pdb\|1S9X\|B Chain B, Crystal Structure Analysis Of Ny-Eso-1 Epitope Analogue, Sllmwitqa, In Complex With Hla-A2 >pdb\|1S9Y\|B Chain B, Crystal Structure Analysis Of Ny-Eso-1 Epitope Analogue, Sllmwitqs, In Complex With Hla-A2 >pdb\|1SYS\|B Chain B, Crystal Structure Of Hla, B4403, And Peptide Eeptvikky >pdb\|1SYV\|B Chain B, Hla-B4405 Complexed To The Dominant Self Ligand Eefgraygf >pdb\|1W0V\|B Chain B, Crystal Structure Of Hla-B2705 Complexed With The Self- Peptide Tis From Egf-Response Factor 1 >pdb\|1W0W\|B Chain B, Crystal Structure Of Hla-B2709 Complexed With The Self- Peptide Tis From Egf-Response Factor 1 >pdb\|1YDP\|B Chain B, 1.9a Crystal Structure Of Hla-G >pdb\|1TVB\|B Chain B, Crystal Structure Of Melanoma Antigen Gp100(209-217) Bound To Human Class I Mhc Hla-A2 >pdb\|1TVB\|E Chain E, Crystal Structure Of Melanoma Antigen Gp100(209-217) Bound To Human Class I Mhc Hla-A2 >pdb\|1TVH\|B Chain B, Crystal Structure Of Modified Melanoma Antigen Gp100(209- T2m) Bound To Human Class I Mhc Hla-A2 >pdb\|1TVH\|E Chain E, Crystal Structure Of Modified Melanoma Antigen Gp100(209- T2m) Bound To Human Class I Mhc Hla-A2 >pdb\|2BSR\|B Chain B, Crystal Structures And Kir3dl1 Recognition Of Three Immunodominant Viral Peptides Complexed To Hla-B2705 >pdb\|2BSS\|B Chain B, Crystal Structures And Kir3dl1 Recognition Of Three Immunodominant Viral Peptides Complexed To Hla-B2705 >pdb\|2BST\|B Chain B, Crystal Structures And Kir3dl1 Recognition Of Three Immunodominant Viral Peptides Complexed To Hla-B2705 >pdb\|2BNQ\|B Chain B, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2BNR\|B Chain B, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|1ZT4\|B Chain B, The Crystal Structure Of Human Cd1d With And Without Alpha- Galactosylceramide >pdb\|1ZT4\|D Chain D, The Crystal Structure Of Human Cd1d With And Without Alpha- Galactosylceramide >pdb\|2BVO\|B Chain B, Structures Of Three Hiv-1 Hla-B5703-Peptide Complexes And Identification Of Related Hlas Potentially Associated With Long-Term Non-Progression >pdb\|2BVP\|B Chain B, Structures Of Three Hiv-1 Hla-B5703-Peptide Complexes And Identification Of Related Hlas Potentially Associated With Long-Term Non-Progression >pdb\|2BVQ\|B Chain B, Structures Of Three Hiv-1 Hla-B5703-Peptide Complexes And Identification Of Related Hlas Potentially Associated With Long-Term Non-Progression >pdb\|2AV1\|B Chain B, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The E63q And K66a Mutations In The Heavy Chain. >pdb\|2AV1\|E Chain E, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The E63q And K66a Mutations In The Heavy Chain. >pdb\|2AV7\|B Chain B, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The K66a Mutation In The Heavy Chain. >pdb\|2AV7\|E Chain E, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The K66a Mutation In The Heavy Chain. >pdb\|2A83\|B Chain B, Crystal Structure Of Hla-B2705 Complexed With The Glucagon Receptor (Gr) Peptide (Residues 412-420) >pdb\|2BCK\|B Chain B, Crystal Structure Of Hla-A2402 Complexed With A Telomerase Peptide >pdb\|2BCK\|E Chain E, Crystal Structure Of Hla-A2402 Complexed With A Telomerase Peptide >pdb\|2F74\|B Chain B, Murine Mhc Class I H-2db In Complex With Human B2- Microglobulin And Lcmv-Derived Immunodminant Peptide Gp33 >pdb\|2F74\|E Chain E, Murine Mhc Class I H-2db In Complex With Human B2- Microglobulin And Lcmv-Derived Immunodminant Peptide Gp33 >pdb\|2D31\|B Chain B, Crystal Structure Of Disulfide-Linked Hla-G Dimer >pdb\|2D31\|E Chain E, Crystal Structure Of Disulfide-Linked Hla-G Dimer >pdb\|2ESV\|B Chain B, Structure Of The Hla-E-VmaprtlilKK50.4 TCR COMPLEX >pdb\|2D4F\|A Chain A, The Crystal Structure Of Human Beta2-Microglobulin >pdb\|2GIT\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Modified Htlv- 1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|2GIT\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Modified Htlv- 1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|2GJ6\|B Chain B, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|2DYP\|B Chain B, Crystal Structure Of Lilrb2(Lir2ILT4CD85D) COMPLEXED WITH Hla-G >pdb\|2GT9\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Decameric Melan-AMART-1(26-35) Peptide >pdb\|2GT9\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Decameric Melan-AMART-1(26-35) Peptide >pdb\|2GTW\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A27l Substitution >pdb\|2GTW\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A27l Substitution >pdb\|2GTZ\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A28l Substitution >pdb\|2GTZ\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A28l Substitution >pdb\|2GUO\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Native Nonameric Melan-AMART-1(27-35) Peptide >pdb\|2GUO\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Native Nonameric Melan-AMART-1(27-35) Peptide >pdb\|2J8U\|B Chain B, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation. >pdb\|2J8U\|I Chain I, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation. >pdb\|2JCC\|B Chain B, Ah3 Recognition Of Mutant Hla-A2 W167a >pdb\|2JCC\|I Chain I, Ah3 Recognition Of Mutant Hla-A2 W167a >pdb\|2UWE\|B Chain B, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation >pdb\|2UWE\|I Chain I, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation >pdb\|2YXF\|A Chain A, The High Resolution Crystal Structure Of Beta2- Microglobulin Under Physiological Conditions >pdb\|2V2W\|B Chain B, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement >pdb\|2V2W\|E Chain E, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement >pdb\|2V2X\|B Chain B, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement. >pdb\|2V2X\|E Chain E, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement. >pdb\|2VLJ\|B Chain B, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLK\|B Chain B, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLL\|B Chain B, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLL\|E Chain E, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|B Chain B, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|G Chain G, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|3BW9\|B Chain B, Crystal Structure Of Hla B3508 In Complex With A Hcmv 12- Mer Peptide From The Pp65 Protein >pdb\|3BWA\|B Chain B, Crystal Structure Of Hla B3508 In Complex With A Hcmv 8- Mer Peptide From The Pp65 Protein >pdb\|3CDG\|B Chain B, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3CDG\|D Chain D, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3BZE\|B Chain B, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZE\|D Chain D, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZE\|F Chain F, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3BZE\|H Chain H, The Human Non-Classical Major Histocompatibility Complex Molecule Hla-E >pdb\|3CII\|B Chain B, Structure Of Nkg2aCD94 BOUND TO HLA-E >pdb\|3CII\|E Chain E, Structure Of Nkg2aCD94 BOUND TO HLA-E >pdb\|3B3I\|B Chain B, Citrullination-Dependent Differential Presentation Of A Self-Peptide By Hla-B27 Subtypes >pdb\|3B6S\|B Chain B, Crystal Structure Of Hla-B2705 Complexed With The Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|3BGM\|B Chain B, Crystal Structure Of Pkd2 Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3BH8\|B Chain B, Crystal Structure Of Rqa_m Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3BH9\|B Chain B, Crystal Structure Of Rty Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3BO8\|B Chain B, The High Resolution Crystal Structure Of Hla-A1 Complexed With The Mage-A1 Peptide >pdb\|3BP4\|B Chain B, The High Resolution Crystal Structure Of Hla-B2705 In Complex With A Cathepsin A Signal Sequence Peptide Pcata >pdb\|3BP7\|B Chain B, The High Resolution Crystal Structure Of Hla-B2709 In Complex With A Cathepsin A Signal Sequence Peptide, Pcata >pdb\|3FFC\|B Chain B, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR >pdb\|3FFC\|G Chain G, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR >pdb\|3BVN\|B Chain B, High Resolution Crystal Structure Of Hla-B1402 In Complex With The Latent Membrane Protein 2 Peptide (Lmp2) Of Epstein-Barr Virus >pdb\|3BVN\|E Chain E, High Resolution Crystal Structure Of Hla-B1402 In Complex With The Latent Membrane Protein 2 Peptide (Lmp2) Of Epstein-Barr Virus >pdb\|3BXN\|B Chain B, The High Resolution Crystal Structure Of Hla-B1402 Complexed With A Cathepsin A Signal Sequence Peptide, Pcata >pdb\|3CZF\|B Chain B, Crystal Structure Of Hla-B2709 Complexed With The Glucagon Receptor (Gr) Peptide (Residues 412-420) >pdb\|3FT2\|B Chain B, Crystal Structure Of A Citrulline Peptide Variant Of The Minor Histocompatibility Peptide Ha-1 In Complex With Hla- A2 >pdb\|3FT3\|B Chain B, Crystal Structure Of The Minor Histocompatibility Peptide Ha-1his In Complex With Hla-A2 >pdb\|3FT4\|B Chain B, Crystal Structure Of The Minor Histocompatibility Peptide Ha-1arg In Complex With Hla-A2 >pdb\|3GJF\|B Chain B, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJF\|E Chain E, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|B Chain B, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|E Chain E, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|K Chain K, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|Q Chain Q, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3D18\|B Chain B, Crystal Structure Of Hla-B2709 Complexed With A Variant Of The Latent Membrane Protein 2 Peptide (Lmp2(L)) Of Epstein- Barr Virus >pdb\|3DTX\|B Chain B, Crystal Structure Of Hla-B2705 Complexed With The Double Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|3HAE\|B Chain B, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|E Chain E, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|K Chain K, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|Q Chain Q, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HCV\|B Chain B, Crystal Structure Of Hla-B2709 Complexed With The Double Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 400-408) >pdb\|3D39\|B Chain B, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(4-Fluorophenylalanine)) Peptide >pdb\|3D3V\|B Chain B, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(3,4-Difluorophenylalanine)) Peptide >pdb\|3GIV\|B Chain B, Antigen Processing Influences Hiv-Specific Cytotoxic T Lymphocyte Immunodominance >pdb\|3GIV\|E Chain E, Antigen Processing Influences Hiv-Specific Cytotoxic T Lymphocyte Immunodominance >pdb\|3HG1\|B Chain B, Germline-Governed Recognition Of A Cancer Epitope By An Immunodominant Human T Cell Receptor >pdb\|3GSN\|L Chain L, Crystal Structure Of The Public Ra14 Tcr In Complex With The Hcmv Dominant NlvHLA-A2 Epitope >pdb\|3GSO\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv Peptide >pdb\|3GSQ\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5s Peptide Variant >pdb\|3GSR\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5v Peptide Variant >pdb\|3GSU\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5t Peptide Variant >pdb\|3GSV\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5q Peptide Variant >pdb\|3GSW\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-T8a Peptide Variant >pdb\|3GSX\|B Chain B, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-T8v Peptide Variant >pdb\|3KPO\|B Chain B, Crystal Structure Of Hla B4403 In Complex With Eeylkawtf, A Mimotope >pdb\|3H7B\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Tel1p Peptide >pdb\|3H7B\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Tel1p Peptide >pdb\|3H9H\|B Chain B, Human Class I Mhc Hla-A2(A150p) In Complex With The Tel1p Peptide >pdb\|3H9H\|E Chain E, Human Class I Mhc Hla-A2(A150p) In Complex With The Tel1p Peptide >pdb\|3H9S\|B Chain B, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Bound Tel1p Peptide >pdb\|3IXA\|B Chain B, Human Class I Mhc Hla-A2(A150p) In Complex With The Tax Peptide >pdb\|3IXA\|E Chain E, Human Class I Mhc Hla-A2(A150p) In Complex With The Tax Peptide >pdb\|3KLA\|B Chain B, Ca2+ Release From The Endoplasmic Reticulum Of Ny-Eso-1 Specific T Cells Is Modulated By The Affinity Of T Cell Receptor And By The Use Of The Cd8 Co-Receptor >pdb\|3KLA\|E Chain E, Ca2+ Release From The Endoplasmic Reticulum Of Ny-Eso-1 Specific T Cells Is Modulated By The Affinity Of T Cell Receptor And By The Use Of The Cd8 Co-Receptor >pdb\|3KYN\|B Chain B, Crystal Structure Of Hla-G Presenting Kgppaaltl Peptide >pdb\|3KYO\|B Chain B, Crystal Structure Of Hla-G Presenting Klpaqfyil Peptide >pdb\|3KYO\|D Chain D, Crystal Structure Of Hla-G Presenting Klpaqfyil Peptide >pdb\|2X4N\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Residual Fragments Of A Photocleavable Peptide That Is Cleaved Upon Uv-Light Treatment >pdb\|2X4N\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Residual Fragments Of A Photocleavable Peptide That Is Cleaved Upon Uv-Light Treatment >pdb\|2X4O\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Envelope Peptide Env120-128 >pdb\|2X4O\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Envelope Peptide Env120-128 >pdb\|2X4P\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4P\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4R\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Cytomegalovirus (Cmv) Pp65 Epitope >pdb\|2X4R\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Cytomegalovirus (Cmv) Pp65 Epitope >pdb\|2X4U\|B Chain B, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Peptide Rt468-476 >pdb\|2X4U\|E Chain E, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Peptide Rt468-476 >pdb\|3MGO\|B Chain B, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGO\|E Chain E, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGO\|H Chain H, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGO\|K Chain K, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|B Chain B, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|E Chain E, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|H Chain H, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|K Chain K, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MV8\|B Chain B, Crystal Structure Of The Tk3-Gln55his Tcr In Complex With Hl B3501HPVG >pdb\|3MV9\|B Chain B, Crystal Structure Of The Tk3-Gln55ala Tcr In Complex With Hl B3501HPVG >pdb\|3I6G\|B Chain B, Newly Identified Epitope Mn2 From Sars-Cov M Protein Complex Withhla-A0201 >pdb\|3I6G\|E Chain E, Newly Identified Epitope Mn2 From Sars-Cov M Protein Complex Withhla-A0201 >pdb\|3I6K\|B Chain B, Newly Identified Epitope From Sars-Cov Membrane Protein Comp Hla-A0201 >pdb\|3I6K\|F Chain F, Newly Identified Epitope From Sars-Cov Membrane Protein Comp Hla-A0201 >pdb\|3HPJ\|B Chain B, Human Class I Mhc Hla-A2 In Complex With The Wt-1 (126-134) Peptide >pdb\|3HPJ\|E Chain E, Human Class I Mhc Hla-A2 In Complex With The Wt-1 (126-134) Peptide >pdb\|3LKN\|B Chain B, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1918 Strain >pdb\|3LKO\|B Chain B, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1934 Strain >pdb\|3LKP\|B Chain B, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1972 Strain >pdb\|3LKQ\|B Chain B, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1977 Strain >pdb\|3LKR\|B Chain B, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 2009 H1n1 Swine Origin Strain >pdb\|3LKS\|B Chain B, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1980 Strain >pdb\|3I6L\|E Chain E, Newly Identified Epitope N1 Derived From Sars-Cov N Protein Complexed With Hla-A2402	21.0	106	2%	1765	80%
CAC03881.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
NP_003138.3	protein SSX2 isoform a [Homo sapiens]	21.0	146	2%	1765	85%
CAC03959.1	T-cell receptor beta chain [Homo sapiens]	21.0	55.8	1%	1765	71%
CAC03952.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
1K2P_A	Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain >pdb\|1K2P\|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain	21.0	187	3%	1765	83%
1FG9_C	Chain C, 3:1 Complex Of Interferon-Gamma Receptor With Interferon- Gamma Dimer >pdb\|1FG9\|D Chain D, 3:1 Complex Of Interferon-Gamma Receptor With Interferon- Gamma Dimer >pdb\|1FG9\|E Chain E, 3:1 Complex Of Interferon-Gamma Receptor With Interferon- Gamma Dimer	21.0	194	2%	1765	100%
1MI5_D	Chain D, The Crystal Structure Of Lc13 Tcr In Complex With Hlab8-Ebv Peptide Complex >pdb\|3KPR\|D Chain D, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPR\|I Chain I, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPS\|D Chain D, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylqafty A Self Peptide From The Abcd3 Protein	21.0	239	3%	1765	100%
CAB59424.1	T cell receptor beta chain variable region [Homo sapiens]	21.0	36.9	0%	1765	80%
1FYV_A	Chain A, Crystal Structure Of The Tir Domain Of Human Tlr1	21.0	174	2%	1765	100%
NP_079511.1	tankyrase-2 [Homo sapiens]	21.0	817	11%	1765	100%
NP_937758.1	TYRO protein tyrosine kinase-binding protein isoform 2 precursor [Homo sapiens]	21.0	153	2%	1765	100%
NP_689866.1	ubiquitin-conjugating enzyme E2 E2 [Homo sapiens]	21.0	204	2%	1765	100%
O42043.2	RecName: Full=HERV-K_1q23.3 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=HERV-K18 envelope protein; AltName: Full=HERV-K110 envelope protein; AltName: Full=IDDMK1,2 22 envelope protein; AltName: Full=HERV-K(C1a) envelope protein; AltName: Full=HERV-K18 superantigen; AltName: Full=IDDMK1,2 22 superantigen; Contains: RecName: Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane protein; Short=TM	21.0	565	7%	1765	100%
1FYT_D	Chain D, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr1 >pdb\|1J8H\|D Chain D, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr4	21.0	332	5%	1765	100%
1H04_P	Chain P, Human Cd55 Domains 3 & 4	21.0	106	2%	1765	80%
NP_003323.1	TYRO protein tyrosine kinase-binding protein isoform 1 precursor [Homo sapiens] >sp\|O43914.1\|TYOBP_HUMAN RecName: Full=TYRO protein tyrosine kinase-binding protein; AltName: Full=DNAX-activation protein 12; AltName: Full=Killer-activating receptor-associated protein; Short=KAR-associated protein; Flags: Precursor	21.0	153	2%	1765	100%
CAC03875.1	T-cell receptor beta chain [Homo sapiens]	21.0	72.5	1%	1765	100%
1KGC_D	Chain D, Immune Receptor	21.0	239	3%	1765	100%
Q9H1D9.1	RecName: Full=DNA-directed RNA polymerase III subunit RPC6; Short=RNA polymerase III subunit C6; AltName: Full=DNA-directed RNA polymerase III subunit F; AltName: Full=RNA polymerase III 39 kDa subunit; Short=RPC39	21.0	296	5%	1765	100%
CAC28010.1	immunoglobulin lambda light chain variable region [Homo sapiens]	21.0	113	1%	1765	85%
1HSA_B	Chain B, The Three-Dimensional Structure Of Hla-B27 At 2.1 Angstroms Resolution Suggests A General Mechanism For Tight Peptide Binding To Mhc >pdb\|1HSA\|E Chain E, The Three-Dimensional Structure Of Hla-B27 At 2.1 Angstroms Resolution Suggests A General Mechanism For Tight Peptide Binding To Mhc >pdb\|2HLA\|B Chain B, Specificity Pockets For The Side Chains Of Peptide Antigens In Hla-Aw68 >pdb\|3HLA\|B Chain B, Human Class I Histocompatibility Antigen A2.1 >pdb\|1AGB\|B Chain B, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggrkkykl-3r Mutation) >pdb\|1AGC\|B Chain B, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkkyql-7q Mutation) >pdb\|1AGD\|B Chain B, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkkykl-Index Peptide) >pdb\|1AGE\|B Chain B, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkkyrl-7r Mutation) >pdb\|1AGF\|B Chain B, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkrykl-5r Mutation) >pdb\|1QLF\|B Chain B, Mhc Class I H-2db Complexed With Glycopeptide K3g >pdb\|1C16\|B Chain B, Crystal Structure Analysis Of The GammaDELTA T CELL LIGAND T22 >pdb\|1C16\|D Chain D, Crystal Structure Analysis Of The GammaDELTA T CELL LIGAND T22 >pdb\|1C16\|F Chain F, Crystal Structure Analysis Of The GammaDELTA T CELL LIGAND T22 >pdb\|1C16\|H Chain H, Crystal Structure Analysis Of The GammaDELTA T CELL LIGAND T22 >pdb\|1EXU\|B Chain B, Crystal Structure Of The Human Mhc-Related Fc Receptor >pdb\|1E27\|B Chain B, Nonstandard Peptide Binding Of Hla-B5101 Complexed With Hiv Immunodominant Epitope Km1(Lppvvakei) >pdb\|1MI5\|B Chain B, The Crystal Structure Of Lc13 Tcr In Complex With Hlab8-Ebv Peptide Complex >pdb\|1M05\|B Chain B, Hla B8 In Complex With An Epstein Barr Virus Determinant >pdb\|1M05\|D Chain D, Hla B8 In Complex With An Epstein Barr Virus Determinant >pdb\|1M6O\|B Chain B, Crystal Structure Of Hla B4402 In Complex With Hla Dpa0201 Peptide >pdb\|1ONQ\|B Chain B, Crystal Structure Of Cd1a In Complex With A Sulfatide >pdb\|1ONQ\|D Chain D, Crystal Structure Of Cd1a In Complex With A Sulfatide >pdb\|1P7Q\|B Chain B, Crystal Structure Of Hla-A2 Bound To Lir-1, A Host And Viral Mhc Receptor >pdb\|1N2R\|B Chain B, A Natural Selected Dimorphism In Hla B44 Alters Self, Peptide Reportoire And T Cell Recognition. >pdb\|1R3H\|B Chain B, Crystal Structure Of T10 >pdb\|1R3H\|D Chain D, Crystal Structure Of T10 >pdb\|1R3H\|F Chain F, Crystal Structure Of T10 >pdb\|1R3H\|H Chain H, Crystal Structure Of T10 >pdb\|1XH3\|B Chain B, Conformational Restraints And Flexibility Of 14-Meric Peptides In Complex With Hla-B3501 >pdb\|1XZ0\|B Chain B, Crystal Structure Of Cd1a In Complex With A Synthetic Mycobactin Lipopeptide >pdb\|1XZ0\|D Chain D, Crystal Structure Of Cd1a In Complex With A Synthetic Mycobactin Lipopeptide >pdb\|1XR8\|B Chain B, Crystal Structures Of Hla-B1501 In Complex With Peptides From Human Ubch6 And Epstein-Barr Virus Ebna-3 >pdb\|1XR9\|B Chain B, Crystal Structures Of Hla-B1501 In Complex With Peptides From Human Ubch6 And Epstein-Barr Virus Ebna-3 >pdb\|1ZHK\|B Chain B, Crystal Structure Of Hla-B3501 Presenting 13-Mer Ebv Antigen Lpeplpqgqltay >pdb\|1ZHL\|B Chain B, Crystal Structure Of Hla-B3508 Presenting 13-Mer Ebv Antigen Lpeplpqgqltay >pdb\|1VGK\|B Chain B, The Crystal Structure Of Class I Major Histocompatibility Complex, H-2kd At 2.0 A Resolution >pdb\|1ZSD\|B Chain B, Crystal Structure Of Hla-B3501 Presenting An 11-Mer Ebv Antigen Eplpqgqltay >pdb\|1X7Q\|B Chain B, Crystal Structure Of Hla-A1101 With Sars Nucleocapsid Peptide >pdb\|1ZS8\|B Chain B, Crystal Structure Of The Murine Mhc Class Ib Molecule M10.5 >pdb\|1ZS8\|D Chain D, Crystal Structure Of The Murine Mhc Class Ib Molecule M10.5 >pdb\|1ZS8\|F Chain F, Crystal Structure Of The Murine Mhc Class Ib Molecule M10.5 >pdb\|1ZS8\|H Chain H, Crystal Structure Of The Murine Mhc Class Ib Molecule M10.5 >pdb\|1ZS8\|J Chain J, Crystal Structure Of The Murine Mhc Class Ib Molecule M10.5 >pdb\|1S8D\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-3a >pdb\|1T1W\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-3f6i8v >pdb\|1T1X\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-4l >pdb\|1T1Y\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-5v >pdb\|1T1Z\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-6a >pdb\|1T20\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-6i >pdb\|1T21\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9, Monoclinic Crystal >pdb\|1T22\|B Chain B, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9, Orthorhombic Crystal >pdb\|2AK4\|B Chain B, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|G Chain G, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|L Chain L, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|R Chain R, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AXF\|B Chain B, The Immunogenicity Of A Viral Cytotoxic T Cell Epitope Is Controlled By Its Mhc-Bound Conformation >pdb\|2AXG\|B Chain B, The Immunogenicity Of A Viral Cytotoxic T Cell Epitope Is Controlled By Its Mhc-Bound Conformation >pdb\|2H26\|B Chain B, Human Cd1b In Complex With Endogenous Phosphatidylcholine And Spacer >pdb\|1ZVS\|B Chain B, Crystal Structure Of The First Class Mhc Mamu And Tat-Tl8 Complex >pdb\|1ZVS\|E Chain E, Crystal Structure Of The First Class Mhc Mamu And Tat-Tl8 Complex >pdb\|2H6P\|B Chain B, Crystal Structure Of Hla-B3501 Presenting The Human Cytochrome P450 Derived Peptide, Kpivvlhgy >pdb\|2HJK\|B Chain B, Crystal Structure Of Hla-B5703 And Hiv-1 Peptide >pdb\|2HJL\|B Chain B, Crystal Structure Of Hla-B5703 And Hiv-1 Peptide >pdb\|2HN7\|B Chain B, Hla-A1101 In Complex With Hbv Peptide Homologue >pdb\|2FYY\|B Chain B, The Role Of T Cell Receptor Alpha Genes In Directing Human Mhc Restriction >pdb\|2FZ3\|B Chain B, The Role Of T Cell Receptor Alpha Genes In Directing Human Mhc Restriction >pdb\|2NW3\|B Chain B, Crystal Structure Of Hla-B3508 Presenting Ebv Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|B Chain B, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|G Chain G, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|L Chain L, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|R Chain R, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2PO6\|B Chain B, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain >pdb\|2PO6\|F Chain F, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain >pdb\|3C9N\|B Chain B, Crystal Structure Of A Sars Corona Virus Derived Peptide Bound To The Human Major Histocompatibility Complex Class I Molecule Hla-B1501 >pdb\|2RFX\|B Chain B, Crystal Structure Of Hla-B5701, Presenting The Self Peptide, Lsspvtksf >pdb\|3D2U\|B Chain B, Structure Of Ul18, A Peptide-Binding Viral Mhc Mimic, Bound To A Host Inhibitory Receptor >pdb\|3D2U\|F Chain F, Structure Of Ul18, A Peptide-Binding Viral Mhc Mimic, Bound To A Host Inhibitory Receptor >pdb\|3DBX\|B Chain B, Structure Of Chicken Cd1-2 With Bound Fatty Acid >pdb\|3DX6\|B Chain B, Crystal Structure Of B4402 Presenting A 10mer Ebv Epitope >pdb\|3DX7\|B Chain B, Crystal Structure Of Hla-B4403 Presenting 10mer Ebv Antigen >pdb\|3DX8\|B Chain B, Crystal Structure Of B4405 Presenting A 10mer Ebv Epitope >pdb\|3DXA\|B Chain B, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|G Chain G, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|L Chain L, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3HUJ\|B Chain B, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor >pdb\|3HUJ\|D Chain D, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor >pdb\|3KPL\|B Chain B, Crystal Structure Of Hla B4402 In Complex With Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3KPM\|B Chain B, Crystal Structure Of Hla B4402 In Complex With Eeylkawtf, A Mimotope >pdb\|3KPN\|B Chain B, Crystal Structure Of Hla B4403 In Complex With Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3KPP\|B Chain B, Crystal Structure Of Hla B4405 In Complex With Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3KPR\|B Chain B, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPR\|G Chain G, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPS\|B Chain B, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylqafty A Self Peptide From The Abcd3 Protein >pdb\|3L3D\|B Chain B, Crystal Structure Of Hla-B4402 In Complex With The F3a Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3G\|B Chain B, Crystal Structure Of Hla-B4402 In Complex With The R5a Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3I\|B Chain B, Crystal Structure Of Hla-B4402 In Complex With The F7a Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3J\|B Chain B, Crystal Structure Of Hla-B4402 In Complex With The F3aR5A Double Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3L3K\|B Chain B, Crystal Structure Of Hla-B4402 In Complex With The R5aF7A Double Mutant Of A Self-Peptide Derived From Dpa0201 >pdb\|3KWW\|B Chain B, Crystal Structure Of The 'restriction Triad' Mutant Of Hla B Beta-2-Microglobulin And Ebv Peptide >pdb\|3MV7\|B Chain B, Crystal Structure Of The Tk3 Tcr In Complex With Hla-B3501 >pdb\|3M17\|B Chain B, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M17\|D Chain D, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M17\|F Chain F, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M17\|H Chain H, Crystal Structure Of Human Fcrn With A Monomeric Peptide Inh >pdb\|3M1B\|B Chain B, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib >pdb\|3M1B\|D Chain D, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib >pdb\|3M1B\|F Chain F, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib >pdb\|3M1B\|H Chain H, Crystal Structure Of Human Fcrn With A Dimeric Peptide Inhib	21.0	106	2%	1765	80%
NP_110415.1	transmembrane 7 superfamily member 4 [Homo sapiens]	21.0	688	9%	1765	100%
1G1T_A	Chain A, Crystal Structure Of E-Selectin LectinEGF DOMAINS Complexed With Slex	21.0	265	3%	1765	100%
CAC03956.1	T-cell receptor beta chain [Homo sapiens]	21.0	54.9	1%	1765	100%
P30490.1	RecName: Full=HLA class I histocompatibility antigen, B-52 alpha chain; AltName: Full=MHC class I antigen B*52; AltName: Full=Bw-52; AltName: Full=HLA class I histocompatibility antigen, B-5 alpha chain; Flags: Precursor	21.0	202	2%	1765	100%
AAB39713.1	ADP-ribosylation factor-like protein 4 [Homo sapiens]	21.0	328	4%	1765	100%
NP_037384.1	C-type lectin domain family 5 member A [Homo sapiens]	21.0	340	4%	1765	100%
NP_060854.2	GTPase IMAP family member 5 [Homo sapiens] >gb\|EAL24486.1\| immune associated nucleotide 4 like 1 (mouse) [Homo sapiens]	21.0	400	8%	1765	83%
NP_001127964.1	heparan sulfate 2-O-sulfotransferase 1 isoform 2 [Homo sapiens]	20.6	346	4%	1776	100%
CAC03801.1	T-cell receptor beta chain [Homo sapiens]	19.7	141	1%	1851	83%
NP_003989.2	nuclear factor NF-kappa-B p105 subunit isoform 1 [Homo sapiens]	20.2	823	10%	3178	100%
NP_001158884.1	nuclear factor NF-kappa-B p105 subunit isoform 2 [Homo sapiens] >sp\|P19838.2\|NFKB1_HUMAN RecName: Full=Nuclear factor NF-kappa-B p105 subunit; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1; AltName: Full=DNA-binding factor KBF1; AltName: Full=EBP-1; Contains: RecName: Full=Nuclear factor NF-kappa-B p50 subunit	20.2	823	10%	3178	100%
CAR62871.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	181	2%	2053	100%
NP_653310.2	putative tRNA pseudouridine synthase Pus10 [Homo sapiens]	20.2	607	9%	2270	100%
3LD8_A	Chain A, Structure Of Jmjd6 And Fab Fragments >pdb\|3LDB\|A Chain A, Structure Of Jmjd6 Complexd With Alpha-Ketoglutarate And Fab Fragment.	20.6	216	3%	2369	83%
NP_001180267.1	fas apoptotic inhibitory molecule 3 isoform c [Homo sapiens]	20.6	180	2%	2369	100%
3MV9_E	Chain E, Crystal Structure Of The Tk3-Gln55ala Tcr In Complex With Hl B3501HPVG	20.6	254	3%	2369	100%
3MV8_E	Chain E, Crystal Structure Of The Tk3-Gln55his Tcr In Complex With Hl B3501HPVG	20.6	270	3%	2369	100%
3MV7_E	Chain E, Crystal Structure Of The Tk3 Tcr In Complex With Hla-B3501	20.6	254	3%	2369	100%
3LMJ_H	Chain H, Structure Of Human Anti Hiv 21c Fab >pdb\|3LQA\|H Chain H, Crystal Structure Of Clade C Gp120 In Complex With Scd4 And	20.6	189	2%	2369	83%
3LXX_A	Chain A, Crystal Structure Of Human Gtpase Imap Family Member 4	20.6	218	2%	2369	100%
ACZ51446.1	V-set and transmembrane domain containing 1 isoform e [Homo sapiens]	20.6	138	1%	2369	80%
3A4O_X	Chain X, Lyn Kinase Domain	20.6	371	4%	2369	83%
3KNV_A	Chain A, Crystal Structure Of The Ring And First Zinc Finger Domains Of Traf2	20.6	114	1%	2369	100%
3IDX_L	Chain L, Crystal Structure Of Hiv-Gp120 Core In Complex With Cd4- Binding Site Antibody B13, Space Group C222 >pdb\|3IDY\|L Chain L, Crystal Structure Of Hiv-Gp120 Core In Complex With Cd4- Binding Site Antibody B13, Space Group C2221 >pdb\|3IDY\|C Chain C, Crystal Structure Of Hiv-Gp120 Core In Complex With Cd4- Binding Site Antibody B13, Space Group C2221	20.6	264	4%	2369	100%
2KLL_A	Chain A, Solution Structure Of Human Interleukin-33	20.6	87.2	1%	2369	100%
3JZ1_B	Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form >pdb\|3JZ2\|B Chain B, Crystal Structure Of Human Thrombin Mutant N143p In E Form	20.6	316	4%	2369	100%
ACN63313.1	B cell antibody heavy chain variable region [Homo sapiens]	20.6	86.3	1%	2369	100%
ACN63266.1	B cell antibody heavy chain variable region [Homo sapiens]	20.6	142	1%	2369	85%
ACN63246.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63248.1\| B cell antibody heavy chain variable region [Homo sapiens]	20.6	120	1%	2369	85%
ACN63235.1	B cell antibody heavy chain variable region [Homo sapiens]	20.6	37.8	0%	2369	83%
ACN63231.1	B cell antibody heavy chain variable region [Homo sapiens]	20.6	37.8	0%	2369	83%
ACN63228.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63229.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63230.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63232.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63233.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63236.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63237.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63238.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63239.1\| B cell antibody heavy chain variable region [Homo sapiens]	20.6	37.8	0%	2369	83%
ACN63227.1	B cell antibody heavy chain variable region [Homo sapiens]	20.6	37.8	0%	2369	83%
ACN63226.1	B cell antibody heavy chain variable region [Homo sapiens]	20.6	37.8	0%	2369	83%
3F12_B	Chain B, Germline V-Genes Sculpt The Binding Site Of A Family Of Antibodies Neutralizing Human Cytomegalovirus >pdb\|3F12\|D Chain D, Germline V-Genes Sculpt The Binding Site Of A Family Of Antibodies Neutralizing Human Cytomegalovirus	20.6	221	3%	2369	100%
3HC4_H	Chain H, Bha10 Igg1 Fab Quadruple Mutant Variant - Antibody Directed At Human Ltbr	20.6	225	3%	2369	85%
3G04_C	Chain C, Crystal Structure Of The Tsh Receptor In Complex With A Thyroid-Stimulating Autoantibody	20.6	172	3%	2369	100%
3HG1_E	Chain E, Germline-Governed Recognition Of A Cancer Epitope By An Immunodominant Human T Cell Receptor	20.6	224	3%	2369	100%
3F74_A	Chain A, Crystal Structure Of Wild Type Lfa1 I Domain >pdb\|3F74\|B Chain B, Crystal Structure Of Wild Type Lfa1 I Domain >pdb\|3F74\|C Chain C, Crystal Structure Of Wild Type Lfa1 I Domain >pdb\|3F78\|A Chain A, Crystal Structure Of Wild Type Lfa1 I Domain Complexed With Isoflurane >pdb\|3F78\|B Chain B, Crystal Structure Of Wild Type Lfa1 I Domain Complexed With Isoflurane >pdb\|3F78\|C Chain C, Crystal Structure Of Wild Type Lfa1 I Domain Complexed With Isoflurane	20.6	120	1%	2369	83%
3GXB_A	Chain A, Crystal Structure Of Vwf A2 Domain >pdb\|3GXB\|B Chain B, Crystal Structure Of Vwf A2 Domain	20.6	240	2%	2369	100%
3EOA_I	Chain I, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form I >pdb\|3EOA\|J Chain J, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form I >pdb\|3EOB\|I Chain I, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form Ii >pdb\|3EOB\|J Chain J, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form Ii	20.6	122	1%	2369	83%
NP_001139645.1	SLAM family member 9 isoform 3 [Homo sapiens]	20.6	197	3%	2369	100%
ACJ37254.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	20.6	111	1%	2369	100%
3BVN_A	Chain A, High Resolution Crystal Structure Of Hla-B1402 In Complex With The Latent Membrane Protein 2 Peptide (Lmp2) Of Epstein-Barr Virus >pdb\|3BVN\|D Chain D, High Resolution Crystal Structure Of Hla-B1402 In Complex With The Latent Membrane Protein 2 Peptide (Lmp2) Of Epstein-Barr Virus >pdb\|3BXN\|A Chain A, The High Resolution Crystal Structure Of Hla-B1402 Complexed With A Cathepsin A Signal Sequence Peptide, Pcata	20.6	155	2%	2369	100%
3DX9_B	Chain B, Crystal Structure Of The Dm1 Tcr At 2.75a >pdb\|3DX9\|D Chain D, Crystal Structure Of The Dm1 Tcr At 2.75a >pdb\|3DXA\|E Chain E, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|J Chain J, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen >pdb\|3DXA\|O Chain O, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 And Decamer Ebv Antigen	20.6	277	3%	2369	100%
NP_001161144.1	lipoma-preferred partner isoform b [Homo sapiens]	20.6	444	6%	2369	100%
3F8U_B	Chain B, TapasinERP57 HETERODIMER >pdb\|3F8U\|D Chain D, TapasinERP57 HETERODIMER	20.6	408	5%	2369	100%
3EGB_A	Chain A, Structure Of Pellino2 Fha Domain At 3.3 Angstroms Resolution >pdb\|3EGB\|B Chain B, Structure Of Pellino2 Fha Domain At 3.3 Angstroms Resolution.	20.6	275	3%	2369	83%
3EGA_A	Chain A, Crystal Structure Of Pellino2 Fha Domain At 1.8 Angstroms Resolution	20.6	241	3%	2369	83%
3EYQ_D	Chain D, Crystal Structure Of Mj5 Fab, A Germline Antibody Variant Of Anti-Human Cytomegalovirus Antibody 8f9	20.6	221	3%	2369	100%
3EYF_B	Chain B, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9 Plus Gb Peptide >pdb\|3EYF\|D Chain D, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9 Plus Gb Peptide >pdb\|3EYO\|B Chain B, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9 >pdb\|3EYO\|D Chain D, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9	20.6	191	3%	2369	83%
2VYR_A	Chain A, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|B Chain B, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|C Chain C, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|D Chain D, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody	20.6	125	1%	2369	83%
CAO98983.1	killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 3 [Homo sapiens]	20.6	427	5%	2369	100%
3D0L_A	Chain A, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Fp-Mper Hyb3k Construct 514gigalflgflgaags528kk-Ahx-655kneqelleldkwaslwn671	20.6	225	3%	2369	100%
2JXB_A	Chain A, Structure Of Cd3epsilon-Nck2 First Sh3 Domain Complex	20.6	38.2	0%	2369	83%
CAR63051.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	89.7	1%	2369	100%
CAR63048.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	73.0	1%	2369	66%
CAR63045.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	53.2	0%	2369	80%
CAR63038.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	138	1%	2369	100%
CAR63035.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	52.4	0%	2369	100%
CAR63028.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.6	88.5	1%	2369	83%
CAR63005.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.6	136	1%	2369	100%
CAR62988.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	102	1%	2369	100%
CAR62973.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.6	1%	2369	80%
CAR62952.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	68.7	1%	2369	100%
CAR62942.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	71.3	1%	2369	71%
CAR62941.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	91.0	1%	2369	66%
CAR62934.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	136	1%	2369	100%
CAR62933.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	87.6	1%	2369	100%
CAR62923.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	102	1%	2369	100%
CAR62845.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	88.0	1%	2369	71%
CAR62768.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	36.9	0%	2369	80%
CAR62756.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	109	1%	2369	100%
CAR62755.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	87.2	1%	2369	71%
CAR62681.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.6	83.8	1%	2369	80%
CAR62648.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.6	118	1%	2369	80%
CAR62619.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	195	3%	2369	100%
CAR62615.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	119	1%	2369	100%
CAR62571.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	95.2	1%	2369	80%
3DUH_A	Chain A, Structure Of Interleukin-23 >pdb\|3DUH\|B Chain B, Structure Of Interleukin-23	20.6	310	4%	2369	100%
3BN3_A	Chain A, Crystal Structure Of Icam-5 In Complex With Al I Domain	20.6	152	2%	2369	83%
2V7N_A	Chain A, Unusual Twinning In Crystals Of The Cits Binding Antibody Fab Fragment F3p4 >pdb\|2V7N\|C Chain C, Unusual Twinning In Crystals Of The Cits Binding Antibody Fab Fragment F3p4 >pdb\|2V7N\|E Chain E, Unusual Twinning In Crystals Of The Cits Binding Antibody Fab Fragment F3p4 >pdb\|2V7N\|G Chain G, Unusual Twinning In Crystals Of The Cits Binding Antibody Fab Fragment F3p4	20.6	240	3%	2369	100%
3BT1_B	Chain B, Structure Of Urokinase Receptor, Urokinase And Vitronectin Complex >pdb\|3BT2\|B Chain B, Structure Of Urokinase Receptor, Urokinase And Vitronectin Complex	20.6	74.7	0%	2369	83%
CAQ53833.1	killer-cell immunoglobulin-like receptor [Homo sapiens]	20.6	389	5%	2369	100%
2PYF_B	Chain B, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Revealnative Diagonal Binding Geometry Unbound Tcr Clone 5-1	20.6	201	2%	2369	100%
2PYE_E	Chain E, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Revealnative Diagonal Binding Geometry Tcr Clone C5c1 Complexed With Mhc	20.6	201	2%	2369	100%
2P5W_E	Chain E, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry	20.6	201	2%	2369	100%
2P5E_E	Chain E, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry	20.6	201	2%	2369	100%
2NNA_A	Chain A, Structure Of The Mhc Class Ii Molecule Hla-Dq8 Bound With A Deamidated Gluten Peptide	20.6	234	3%	2369	85%
2JHI_F	Chain F, Structure Of Globular Heads Of M-Ficolin Complexed With N- Acetyl-D-Galactosamine >pdb\|2JHK\|F Chain F, Structure Of Globular Heads Of M-Ficolin Complexed With N- Acetyl-D-Glucosamine	20.6	194	3%	2369	80%
2EAX_A	Chain A, Crystal Structure Of Human Pgrp-Ibetac In Complex With Glycosamyl Muramyl Pentapeptide >pdb\|2EAX\|B Chain B, Crystal Structure Of Human Pgrp-Ibetac In Complex With Glycosamyl Muramyl Pentapeptide >pdb\|2EAX\|C Chain C, Crystal Structure Of Human Pgrp-Ibetac In Complex With Glycosamyl Muramyl Pentapeptide	20.6	189	2%	2369	85%
O60602.4	RecName: Full=Toll-like receptor 5; AltName: Full=Toll/interleukin-1 receptor-like protein 3; Flags: Precursor	20.6	964	13%	2369	100%
2PGB_B	Chain B, Inhibitor-Free Human Thrombin Mutant C191a-C220a	20.6	380	5%	2369	100%
ABR91959.1	T-cell receptor beta chain [Homo sapiens]	20.6	106	1%	2369	83%
ABR91954.1	T-cell receptor beta chain [Homo sapiens]	20.6	57.1	0%	2369	83%
ABR91956.1	T-cell receptor beta chain [Homo sapiens]	20.6	86.8	1%	2369	83%
ABR91960.1	T-cell receptor beta chain [Homo sapiens]	20.6	67.9	0%	2369	80%
ABR91961.1	T-cell receptor beta chain [Homo sapiens]	20.6	52.4	0%	2369	80%
ABR37245.1	T-cell receptor beta chain [Homo sapiens]	20.6	69.6	1%	2369	100%
ABR37269.1	T cell receptor [Homo sapiens] >gb\|ABR37272.1\| T cell receptor [Homo sapiens]	20.6	53.2	0%	2369	71%
ABR37236.1	T cell receptor [Homo sapiens]	20.6	40.7	0%	2369	70%
ABR37238.1	T-cell receptor beta chain [Homo sapiens]	20.6	53.2	0%	2369	71%
ABR37237.1	T-cell receptor beta chain [Homo sapiens]	20.6	139	1%	2369	100%
ABR37259.1	T-cell receptor beta chain [Homo sapiens]	20.6	67.9	0%	2369	80%
ABR37241.1	T cell receptor [Homo sapiens]	20.6	156	2%	2369	100%
ABR37244.1	T-cell receptor beta chain [Homo sapiens]	20.6	54.1	0%	2369	71%
ABR37265.1	T-cell receptor beta chain [Homo sapiens]	20.6	123	1%	2369	83%
ABR37261.1	T cell receptor [Homo sapiens]	20.6	158	2%	2369	83%
ABR37268.1	T-cell receptor beta chain [Homo sapiens]	20.6	53.2	0%	2369	71%
ABR37271.1	T-cell receptor beta chain [Homo sapiens]	20.6	123	1%	2369	83%
ABR37240.1	T-cell receptor beta chain [Homo sapiens] >gb\|ABR37243.1\| T cell receptor [Homo sapiens]	20.6	156	2%	2369	100%
ABR37262.1	T-cell receptor beta chain [Homo sapiens]	20.6	52.4	0%	2369	80%
ABR37252.1	T-cell receptor beta chain [Homo sapiens]	20.6	53.2	0%	2369	71%
ABR37242.1	T-cell receptor beta chain [Homo sapiens]	20.6	139	1%	2369	100%
ABR37251.1	T-cell receptor beta chain [Homo sapiens]	20.6	53.2	0%	2369	71%
ABR37264.1	T-cell receptor beta chain [Homo sapiens]	20.6	52.4	0%	2369	80%
ABR37246.1	T-cell receptor beta chain [Homo sapiens]	20.6	156	2%	2369	100%
ABR37255.1	T-cell receptor beta chain [Homo sapiens]	20.6	54.1	1%	2369	71%
2P0C_A	Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina >pdb\|2P0C\|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina >pdb\|3BRB\|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene Protein Kinase Mer In Complex With Adp >pdb\|3BRB\|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene Protein Kinase Mer In Complex With Adp >pdb\|3BPR\|A Chain A, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene Protein Kinase Mer In Complex With Inhibitor C52 >pdb\|3BPR\|B Chain B, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene Protein Kinase Mer In Complex With Inhibitor C52 >pdb\|3BPR\|C Chain C, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene Protein Kinase Mer In Complex With Inhibitor C52 >pdb\|3BPR\|D Chain D, Crystal Structure Of Catalytic Domain Of The Proto-Oncogene Protein Kinase Mer In Complex With Inhibitor C52	20.6	345	3%	2369	100%
2OD3_B	Chain B, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents	20.6	348	4%	2369	100%
NP_940883.2	V-set and transmembrane domain-containing protein 1 precursor [Homo sapiens] >gb\|ACU00109.1\| V-set and transmembrane domain containing 1 isoform a [Homo sapiens] >emb\|CAZ61324.1\| V-set and transmembrane domain containing 1 [Homo sapiens]	20.6	327	5%	2369	100%
2HP4_A	Chain A, Computational Design And Crystal Structure Of An Enhanced Affinity Mutant Human Cd8-Alpha-Alpha Co-Receptor >pdb\|2HP4\|B Chain B, Computational Design And Crystal Structure Of An Enhanced Affinity Mutant Human Cd8-Alpha-Alpha Co-Receptor	20.6	72.5	1%	2369	83%
NP_001074911.1	leukocyte immunoglobulin-like receptor subfamily B member 5 isoform 1 [Homo sapiens]	20.6	584	9%	2369	100%
NP_006855.2	leukocyte immunoglobulin-like receptor subfamily B member 3 isoform 2 [Homo sapiens]	20.6	553	7%	2369	100%
NP_001074919.1	leukocyte immunoglobulin-like receptor subfamily B member 3 isoform 1 [Homo sapiens]	20.6	553	7%	2369	100%
NP_001074912.1	leukocyte immunoglobulin-like receptor subfamily B member 5 isoform 3 [Homo sapiens]	20.6	461	7%	2369	100%
NP_001002858.1	annexin A2 isoform 1 [Homo sapiens]	20.6	239	3%	2369	100%
NP_071320.2	nucleolysin TIA-1 isoform p40 isoform 1 [Homo sapiens]	20.6	350	4%	2369	100%
ABG38437.1	immunglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
ABG38427.1	immunglobulin heavy chain variable region [Homo sapiens]	20.6	37.8	0%	2369	83%
ABG38441.1	immunglobulin heavy chain variable region [Homo sapiens]	20.6	124	1%	2369	100%
ABG38420.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	119	2%	2369	80%
ABG38415.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	51.5	0%	2369	70%
ABG38341.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	136	2%	2369	80%
CAJ14079.1	T-cell receptor beta chain [Homo sapiens]	20.6	37.3	0%	2369	71%
2F53_E	Chain E, Directed Evolution Of Human T-Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Apparent Cross-Reactivity	20.6	200	2%	2369	100%
CAJ90649.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	37.3	0%	2369	85%
CAJ90639.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	36.1	0%	2369	66%
CAJ90632.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	153	2%	2369	100%
CAJ90641.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	73.0	0%	2369	85%
2AJ3_A	Chain A, Crystal Structure Of A Cross-Reactive Hiv-1 Neutralizing Cd4-Binding Site Antibody Fab M18 >pdb\|2AJ3\|C Chain C, Crystal Structure Of A Cross-Reactive Hiv-1 Neutralizing Cd4-Binding Site Antibody Fab M18 >pdb\|2AJ3\|E Chain E, Crystal Structure Of A Cross-Reactive Hiv-1 Neutralizing Cd4-Binding Site Antibody Fab M18	20.6	159	2%	2369	100%
2ESV_E	Chain E, Structure Of The Hla-E-VmaprtlilKK50.4 TCR COMPLEX	20.6	235	2%	2369	100%
2ERJ_A	Chain A, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2 >pdb\|2ERJ\|E Chain E, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2	20.6	120	1%	2369	80%
NP_001139644.1	SLAM family member 9 isoform 2 [Homo sapiens]	20.6	266	4%	2369	100%
AAR89155.1	C4A3 [Homo sapiens] >gb\|AAR89156.1\| C4A3 [Homo sapiens]	20.6	497	7%	2369	100%
AAR89161.1	C4A3 [Homo sapiens] >gb\|AAR89162.1\| C4A2 [Homo sapiens]	20.6	497	7%	2369	100%
AAR89153.1	C4A [Homo sapiens] >gb\|AAR89154.1\| C4A91 [Homo sapiens]	20.6	446	6%	2369	100%
AAR89152.1	C4A [Homo sapiens]	20.6	478	7%	2369	100%
AAR89157.1	C4A3 [Homo sapiens] >gb\|AAR89158.1\| C4A [Homo sapiens] >gb\|AAR89160.1\| C4A3 [Homo sapiens]	20.6	497	7%	2369	100%
AAR89151.1	C4B1 [Homo sapiens]	20.6	464	6%	2369	100%
AAR89159.1	C4A [Homo sapiens]	20.6	466	7%	2369	100%
NP_002153.2	intercellular adhesion molecule 3 precursor [Homo sapiens] >gb\|ABB01007.1\| intercellular adhesion molecule-3 [Homo sapiens]	20.6	393	4%	2369	100%
ACU00108.1	V-set and transmembrane domain containing 1 isoform a [Homo sapiens]	20.6	327	5%	2369	100%
ACU00110.1	V-set and transmembrane domain containing 1 isoform b [Homo sapiens]	20.6	256	3%	2369	100%
NP_055328.2	killer cell immunoglobulin-like receptor 2DS5 [Homo sapiens]	20.6	388	4%	2369	100%
AAN40504.1	melanoma-associated antigen [Homo sapiens]	20.6	509	6%	2369	100%
NP_254273.2	SLAM family member 9 isoform 1 [Homo sapiens]	20.6	373	6%	2369	100%
Q9H0F6.1	RecName: Full=Sharpin; AltName: Full=Shank-associated RH domain-interacting protein; AltName: Full=Shank-interacting protein-like 1; Short=hSIPL1	20.6	315	6%	2369	100%
NP_818932.1	band 4.1-like protein 1 isoform b [Homo sapiens]	20.6	664	10%	2369	100%
NP_001006667.1	DNA dC->dU-editing enzyme APOBEC-3F isoform b [Homo sapiens]	20.6	130	2%	2369	83%
NP_938016.1	myelin protein zero-like protein 3 precursor [Homo sapiens]	20.6	231	3%	2369	100%
2CRY_A	Chain A, Solution Structure Of The Fifth Ig-Like Domain Of Human Kin Of Irre Like 3	20.6	124	2%	2369	100%
2CPC_A	Chain A, Solution Structure Of Rsgi Ruh-030, An Ig Like Domain From Human Cdna	20.6	105	1%	2369	71%
AAC41962.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	223	4%	2369	100%
AAC41951.1	MHC class II HLA-DQ-alpha chain [Homo sapiens] >gb\|AAC41952.1\| MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	266	4%	2369	85%
AAA36071.2	immunoglobulin heavy chain VDJC region [Homo sapiens]	20.6	213	2%	2369	83%
AAC41956.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	284	4%	2369	85%
AAC41953.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	230	4%	2369	85%
AAC41958.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	206	3%	2369	100%
AAA36065.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	20.6	191	2%	2369	83%
AAC41950.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	241	4%	2369	85%
AAC41954.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	242	4%	2369	80%
AAB92619.1	T cell receptor beta chain [Homo sapiens]	20.6	36.9	0%	2369	71%
AAB92618.1	T cell receptor beta chain [Homo sapiens]	20.6	54.9	0%	2369	83%
AAC41957.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	284	4%	2369	85%
AAC41955.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.6	285	5%	2369	85%
NP_071505.2	nucleolysin TIA-1 isoform p40 isoform 2 [Homo sapiens]	20.6	366	4%	2369	100%
AAL04517.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	20.6	74.7	0%	2369	100%
AAC41987.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	20.6	136	2%	2369	80%
AAB92617.1	T cell receptor beta chain [Homo sapiens]	20.6	53.7	0%	2369	80%
NP_114418.2	high affinity immunoglobulin alpha and immunoglobulin mu Fc receptor isoform a [Homo sapiens] >ref\|NP_001116451.1\| high affinity immunoglobulin alpha and immunoglobulin mu Fc receptor isoform a [Homo sapiens]	20.6	280	3%	2369	100%
AAY16631.2	immunoglobulin kappa light chain [Homo sapiens]	20.6	137	2%	2369	100%
AAZ32299.1	immunoglobulin kappa light chain [Homo sapiens]	20.6	153	2%	2369	100%
AAY57125.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	149	1%	2369	100%
AAY57117.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
AAY57123.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	102	1%	2369	80%
AAY57107.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	101	1%	2369	100%
AAY57168.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	118	1%	2369	100%
AAY57170.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	100	1%	2369	100%
AAY57110.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	117	1%	2369	100%
AAY57172.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	36.1	0%	2369	100%
AAY57106.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	104	1%	2369	100%
AAY57108.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	123	1%	2369	100%
AAY57113.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	151	1%	2369	100%
AAY57167.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	124	1%	2369	100%
AAY57128.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	134	1%	2369	100%
AAY57109.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	54.5	1%	2369	66%
AAY57140.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	36.1	0%	2369	100%
AAY57120.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	100	1%	2369	80%
AAY57157.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	158	2%	2369	80%
AAY57112.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	103	1%	2369	100%
AAY57156.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	120	2%	2369	80%
AAY57115.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
AAY57126.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	82.9	0%	2369	100%
AAY57165.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	105	1%	2369	80%
AAY57118.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
AAY57116.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	116	1%	2369	100%
AAY57119.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
AAY57114.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
AAY57169.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	137	2%	2369	85%
AAY57176.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	161	2%	2369	100%
AAY57124.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	138	1%	2369	100%
AAY57130.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	118	1%	2369	100%
AAY57103.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	85.9	1%	2369	100%
AAY57059.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	124	1%	2369	100%
AAY57100.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	103	1%	2369	100%
AAY57073.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	142	2%	2369	100%
AAY57085.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	87.2	1%	2369	100%
AAY57104.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	101	1%	2369	100%
AAY57101.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	153	2%	2369	100%
AAY57102.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	85.9	1%	2369	100%
AAY57078.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	116	1%	2369	100%
AAY57065.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	158	2%	2369	100%
AAY57066.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	107	1%	2369	100%
AAY57099.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	85.9	1%	2369	100%
AAY57105.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	103	1%	2369	83%
AAY57086.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	51.5	0%	2369	66%
AAY33422.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	75.1	0%	2369	100%
AAY33274.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	228	2%	2369	83%
AAY33235.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	88.5	1%	2369	100%
AAY33298.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	84.2	1%	2369	100%
AAY33273.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	208	2%	2369	83%
AAY33331.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	67.0	0%	2369	100%
AAY33255.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	125	1%	2369	100%
AAY33239.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.6	191	2%	2369	83%
AAY33359.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.6	93.5	1%	2369	100%
AAY16600.1	immunoglobulin kappa light chain [Homo sapiens]	20.6	168	2%	2369	100%
AAY16613.1	immunoglobulin kappa light chain [Homo sapiens]	20.6	137	2%	2369	100%
NP_001034241.1	regulator of G-protein signaling 21 [Homo sapiens]	20.6	122	2%	2369	100%
AAL04528.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	20.6	131	1%	2369	100%
AAB31470.1	HIV-specific T-cell antigen receptor beta chain {V-D-J junction, Vbeta19 subset, clone 1.44} [human, patient 1, peripheral blood mononuclear cells, day 20 after onset of symptoms, Peptide Partial, 15 aa]	20.6	20.6	0%	2369	85%
NP_001018091.1	killer cell immunoglobulin-like receptor 2DL5B precursor [Homo sapiens]	20.6	568	8%	2369	100%
NP_001806.2	carcinoembryonic antigen-related cell adhesion molecule 3 precursor [Homo sapiens] >sp\|P40198.2\|CEAM3_HUMAN RecName: Full=Carcinoembryonic antigen-related cell adhesion molecule 3; AltName: Full=Carcinoembryonic antigen CGM1; AltName: CD_antigen=CD66d; Flags: Precursor	20.6	260	3%	2369	100%
NP_004020.1	interferon regulatory factor 7 isoform b [Homo sapiens]	20.6	478	5%	2369	100%
NP_741969.1	T-cell surface glycoprotein CD8 alpha chain isoform 2 precursor [Homo sapiens]	20.6	154	2%	2369	100%
AAL04534.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	20.6	83.8	1%	2369	80%
2FBE_A	Chain A, Crystal Structure Of The Pryspry-Domain >pdb\|2FBE\|B Chain B, Crystal Structure Of The Pryspry-Domain >pdb\|2FBE\|C Chain C, Crystal Structure Of The Pryspry-Domain >pdb\|2FBE\|D Chain D, Crystal Structure Of The Pryspry-Domain	20.6	228	3%	2369	100%
2A9M_H	Chain H, Structural Analysis Of A Tight-Binding Fluorescein-Scfv; Apo Form >pdb\|2A9M\|I Chain I, Structural Analysis Of A Tight-Binding Fluorescein-Scfv; Apo Form	20.6	52.0	0%	2369	80%
2A9N_H	Chain H, A Mutation Designed To Alter Crystal Packing Permits Structural Analysis Of A Tight-Binding Fluorescein-Scfv Complex >pdb\|2A9N\|I Chain I, A Mutation Designed To Alter Crystal Packing Permits Structural Analysis Of A Tight-Binding Fluorescein-Scfv Complex	20.6	52.0	0%	2369	80%
2BNU_B	Chain B, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2BNQ\|E Chain E, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2BNR\|E Chain E, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2F54\|E Chain E, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity >pdb\|2F54\|L Chain L, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity	20.6	200	2%	2369	100%
1YMM_E	Chain E, TcrHLA-Dr2bMBP-Peptide Complex	20.6	211	3%	2369	83%
1T2J_A	Chain A, Crystal Structure Of A Human Vh Domain	20.6	69.6	1%	2369	100%
Q9HBE4.2	RecName: Full=Interleukin-21; Short=IL-21; AltName: Full=Za11; Flags: Precursor	20.6	104	1%	2369	80%
1U8K_A	Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Leldkwasl	20.6	225	3%	2369	100%
1SK3_A	Chain A, Crystal Structure Of The C-Terminal Peptidoglycan-Binding Domain Of Human Peptidoglycan Recognition Protein Ialpha >pdb\|1TWQ\|A Chain A, Crystal Structure Of The C-Terminal Pgn-Binding Domain Of Human Pgrp-Ialpha In Complex With Pgn Analog Muramyl Tripeptide >pdb\|2APH\|A Chain A, Crystal Structure Of Human Pgrp-Ialphac In Complex With Muramyl Pentapeptide >pdb\|2APH\|B Chain B, Crystal Structure Of Human Pgrp-Ialphac In Complex With Muramyl Pentapeptide	20.6	253	3%	2369	100%
1SK4_A	Chain A, Crystal Structure Of The C-Terminal Peptidoglycan-Binding Domain Of Human Peptidoglycan Recognition Protein Ialpha	20.6	256	3%	2369	100%
3A3Z_X	Chain X, Crystal Structure Of The Human Vdr Ligand Binding Domain Bound To The Synthetic Agonist Compound 2alpha-Methyl- Amcr277a(C23s) >pdb\|3A40\|X Chain X, Crystal Structure Of The Human Vdr Ligand Binding Domain Bound To The Synthetic Agonist Compound 2alpha-Methyl- Amcr277b(C23r)	20.6	245	3%	2369	100%
P61550.1	RecName: Full=HERV-T_19q13.11 provirus ancestral Env polyprotein; AltName: Full=Envelope polyprotein; AltName: Full=HERV-T Env protein; Includes: RecName: Full=Surface protein; Short=SU; Includes: RecName: Full=Transmembrane protein; Short=TM; Flags: Precursor	20.6	760	9%	2369	100%
CAG29696.1	immunoglobulin kappa light chain [Homo sapiens]	20.6	74.7	0%	2369	100%
1RD4_A	Chain A, An Allosteric Inhibitor Of Lfa-1 Bound To Its I-Domain >pdb\|1RD4\|B Chain B, An Allosteric Inhibitor Of Lfa-1 Bound To Its I-Domain >pdb\|1RD4\|C Chain C, An Allosteric Inhibitor Of Lfa-1 Bound To Its I-Domain >pdb\|1RD4\|D Chain D, An Allosteric Inhibitor Of Lfa-1 Bound To Its I-Domain	20.6	122	1%	2369	83%
CAE54374.1	immunoglobulin heavy chain [Homo sapiens]	20.6	90.1	1%	2369	71%
CAD67580.1	killer-cell Ig-like receptor [Homo sapiens]	20.6	584	8%	2369	100%
1U8H_A	Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Aldkwas >pdb\|1U8I\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwan >pdb\|1U8J\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwag >pdb\|1U8L\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Dldrwas >pdb\|1U8M\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkyas >pdb\|1U8N\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkfas >pdb\|1U8O\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkhas >pdb\|1U8P\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Ecdkwcs >pdb\|1U8Q\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Elekwas >pdb\|1U91\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Analog Endkw- [dap]-S (Cyclic) >pdb\|1U92\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Analog E-[dap]- Dkwqs (Cyclic) >pdb\|1U93\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Analog Eqdkw- [dap]-S (Cyclic) >pdb\|1U95\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldhwas >pdb\|2PW1\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwnsl >pdb\|2PW2\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwksl >pdb\|3D0V\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Lleldkwaslw >pdb\|3DRO\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Antibody 2f5 In Complex With Gp41 Peptide Elleldkwaslwn Grown In Ammonium Sulfate >pdb\|3DRQ\|A Chain A, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Fp-Mper Hyb3k Construct 514gigalflgflgaags528kk-Ahx-655kneqelleldkwaslwn671 Soaked In Peg2-Propanol Solution >pdb\|3BQU\|A Chain A, Crystal Structure Of The 2f5 Fab'-3h6 Fab Complex >pdb\|3DRT\|A Chain A, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Scrambledfp-Mper Scrhyb3k Construct Gigafgllgflaagskk-Ahx-K656neqelleldkwaslwn671 >pdb\|3EGS\|A Chain A, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Scrambledfp-Mper Scrhyb3k Construct Gigafgllgflaagskk-Ahx-K656neqelleldkwaslwn671 Soaked In Ammonium Sulfate >pdb\|3IDJ\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Analog Eld(Orn)was >pdb\|3IDM\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Analog Eld(Nrg)was >pdb\|3IDN\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Analog Eld(Paf)was >pdb\|3IDG\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Aldkwd >pdb\|3IDI\|A Chain A, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Aldkwnq	20.6	225	3%	2369	100%
CAD35933.1	interferon gamma receptor 1 [Homo sapiens]	20.6	155	2%	2369	100%
CAD89248.1	immunoglobulin heavy chain [Homo sapiens]	20.6	54.1	1%	2369	66%
CAD89249.1	immunoglobulin heavy chain [Homo sapiens]	20.6	84.2	1%	2369	100%
CAD89238.1	immunoglobulin heavy chain [Homo sapiens]	20.6	174	2%	2369	100%
CAD89237.1	immunoglobulin heavy chain [Homo sapiens]	20.6	84.2	1%	2369	100%
CAD89245.1	immunoglobulin heavy chain [Homo sapiens]	20.6	84.2	1%	2369	100%
CAD88673.1	immunoglobulin heavy chain [Homo sapiens]	20.6	68.7	1%	2369	100%
CAD88660.1	immunoglobulin heavy chain [Homo sapiens]	20.6	84.6	1%	2369	80%
CAD88674.1	immunoglobulin heavy chain [Homo sapiens]	20.6	117	1%	2369	100%
CAD88659.1	immunoglobulin heavy chain [Homo sapiens]	20.6	136	1%	2369	100%
CAD88665.1	immunoglobulin heavy chain [Homo sapiens]	20.6	36.1	0%	2369	66%
CAD88700.1	immunoglobulin kappa light chain variable region [Homo sapiens]	20.6	57.5	0%	2369	100%
CAD88663.1	immunoglobulin heavy chain [Homo sapiens]	20.6	71.7	0%	2369	80%
CAD88768.1	immunoglobulin kappa light chain variable region [Homo sapiens]	20.6	90.6	1%	2369	83%
CAD88708.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.6	90.6	1%	2369	85%
1FS1_A	Chain A, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex >pdb\|1FS1\|C Chain C, Insights Into Scf Ubiquitin Ligases From The Structure Of The Skp1-Skp2 Complex	20.6	58.8	1%	2369	100%
NP_004421.2	early growth response protein 3 [Homo sapiens]	20.6	446	7%	2369	100%
NP_663304.1	mitogen-activated protein kinase kinase kinase 7 isoform B [Homo sapiens]	20.6	453	6%	2369	100%
O43866.1	RecName: Full=CD5 antigen-like; AltName: Full=SP-alpha; AltName: Full=CT-2; AltName: Full=IgM-associated peptide; Flags: Precursor	20.6	239	2%	2369	100%
Q96QH2.1	RecName: Full=PML-RARA-regulated adapter molecule 1; Short=PRAM-1; Short=PRAM	20.6	740	9%	2369	100%
NP_006020.4	paraneoplastic antigen Ma1 [Homo sapiens]	20.6	409	5%	2369	83%
NP_037394.2	E3 ubiquitin-protein ligase MYLIP [Homo sapiens]	20.6	505	6%	2369	100%
NP_612121.1	protein G6b isoform G6b-G precursor [Homo sapiens]	20.6	215	3%	2369	83%
1AGB_A	Chain A, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggrkkykl-3r Mutation) >pdb\|1AGC\|A Chain A, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkkyql-7q Mutation) >pdb\|1AGD\|A Chain A, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkkykl-Index Peptide) >pdb\|1AGE\|A Chain A, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkkyrl-7r Mutation) >pdb\|1AGF\|A Chain A, Antagonist Hiv-1 Gag Peptides Induce Structural Changes In Hla B8-Hiv-1 Gag Peptide (Ggkkrykl-5r Mutation)	20.6	169	2%	2369	100%
CAC03902.1	T-cell receptor beta chain [Homo sapiens]	20.6	129	1%	2369	100%
1IM9_D	Chain D, Crystal Structure Of The Human Natural Killer Cell Inhibitory Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4	20.6	235	2%	2369	100%
NP_006831.1	leukocyte immunoglobulin-like receptor subfamily B member 5 isoform 2 [Homo sapiens]	20.6	584	9%	2369	100%
NP_004030.1	annexin A2 isoform 2 [Homo sapiens] >ref\|NP_001002857.1\| annexin A2 isoform 2 [Homo sapiens] >ref\|NP_001129487.1\| annexin A2 isoform 2 [Homo sapiens]	20.6	239	3%	2369	100%
CAB46482.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	135	2%	2369	80%
CAB59390.1	T cell receptor beta chain variable region [Homo sapiens]	20.6	84.6	1%	2369	83%
CAK26553.1	TPA: interleukin 2 receptor, alpha [Homo sapiens]	20.6	253	3%	2369	100%
NP_006761.1	macrophage receptor MARCO [Homo sapiens]	20.6	445	7%	2369	100%
1MI5_A	Chain A, The Crystal Structure Of Lc13 Tcr In Complex With Hlab8-Ebv Peptide Complex >pdb\|1M05\|A Chain A, Hla B8 In Complex With An Epstein Barr Virus Determinant >pdb\|1M05\|C Chain C, Hla B8 In Complex With An Epstein Barr Virus Determinant >pdb\|3FFC\|A Chain A, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR >pdb\|3FFC\|F Chain F, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR	20.6	169	2%	2369	100%
P30498.1	RecName: Full=HLA class I histocompatibility antigen, B-78 alpha chain; AltName: Full=MHC class I antigen B*78; Flags: Precursor	20.6	234	3%	2369	100%
P30460.1	RecName: Full=HLA class I histocompatibility antigen, B-8 alpha chain; AltName: Full=MHC class I antigen B*8; Flags: Precursor	20.6	289	4%	2369	100%
NP_663305.1	mitogen-activated protein kinase kinase kinase 7 isoform C [Homo sapiens]	20.6	404	5%	2369	100%
1L7I_L	Chain L, Crystal Structure Of The Anti-Erbb2 Fab2c4	20.6	274	3%	2369	100%
CAC03815.1	T-cell receptor beta chain [Homo sapiens]	20.6	110	1%	2369	100%
CAB46465.1	immunoglobulin light chain variable region [Homo sapiens]	20.6	125	1%	2369	80%
NP_612116.1	protein G6b isoform G6b-B precursor [Homo sapiens]	20.6	280	4%	2369	100%
NP_000930.1	pro-opiomelanocortin preproprotein [Homo sapiens] >ref\|NP_001030333.1\| pro-opiomelanocortin preproprotein [Homo sapiens]	20.6	202	3%	2369	100%
1MQ9_A	Chain A, Crystal Structure Of High Affinity Alphal I Domain With Ligand Mimetic Crystal Contact >pdb\|1MQA\|A Chain A, Crystal Structure Of High Affinity Alphal I Domain In The Absence Of Ligand Or Metal	20.6	106	1%	2369	83%
1CQP_A	Chain A, Crystal Structure Analysis Of The Complex Lfa-1 (Cd11a) I- Domain LOVASTATIN AT 2.6 A RESOLUTION >pdb\|1CQP\|B Chain B, Crystal Structure Analysis Of The Complex Lfa-1 (Cd11a) I- Domain LOVASTATIN AT 2.6 A RESOLUTION	20.6	120	1%	2369	83%
P30475.1	RecName: Full=HLA class I histocompatibility antigen, B-39 alpha chain; AltName: Full=MHC class I antigen B*39; Flags: Precursor	20.6	286	4%	2369	100%
NP_001902.1	cathepsin G preproprotein [Homo sapiens]	20.6	174	2%	2369	100%
NP_055327.1	killer cell immunoglobulin-like receptor 2DS1 precursor [Homo sapiens]	20.6	389	5%	2369	100%
NP_005118.2	C-type lectin domain family 2 member B [Homo sapiens]	20.6	52.0	0%	2369	100%
1XDD_A	Chain A, X-Ray Structure Of Lfa-1 I-Domain In Complex With Lfa703 At 2.2a Resolution >pdb\|1XDD\|B Chain B, X-Ray Structure Of Lfa-1 I-Domain In Complex With Lfa703 At 2.2a Resolution >pdb\|1XDG\|A Chain A, X-Ray Structure Of Lfa-1 I-Domain In Complex With Lfa878 At 2.1a Resolution >pdb\|1XDG\|B Chain B, X-Ray Structure Of Lfa-1 I-Domain In Complex With Lfa878 At 2.1a Resolution >pdb\|1XUO\|A Chain A, X-Ray Structure Of Lfa-1 I-Domain Bound To A 1,4-Diazepane- 2,5-Dione Inhibitor At 1.8a Resolution >pdb\|1XUO\|B Chain B, X-Ray Structure Of Lfa-1 I-Domain Bound To A 1,4-Diazepane- 2,5-Dione Inhibitor At 1.8a Resolution >pdb\|1DGQ\|A Chain A, Nmr Solution Structure Of The Inserted Domain Of Human Leukocyte Function Associated Antigen-1	20.6	138	2%	2369	83%
NP_079536.2	protein G6b isoform G6b-A precursor [Homo sapiens]	20.6	247	3%	2369	83%
Q29718.1	RecName: Full=HLA class I histocompatibility antigen, B-82 alpha chain; AltName: Full=MHC class I antigen B*82; Flags: Precursor	20.6	253	3%	2369	100%
CAC03971.1	T-cell receptor beta chain [Homo sapiens]	20.6	107	1%	2369	100%
CAC27999.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.6	119	1%	2369	100%
NP_003179.1	mitogen-activated protein kinase kinase kinase 7 isoform A [Homo sapiens]	20.6	453	6%	2369	100%
CAC03809.1	T-cell receptor beta chain [Homo sapiens]	20.6	125	1%	2369	100%
S69896	Ig heavy chain V region (clone RFKL5H), rheumatoid factor - human >emb\|CAA51998.1\| IgG heavy chain, variable region, rheumatoid factor [Homo sapiens]	20.6	53.2	0%	2369	66%
NP_036445.1	killer cell immunoglobulin-like receptor 2DS3 precursor [Homo sapiens]	20.6	427	5%	2369	100%
3EBA_B	Chain B, Cabhul6 Fglw Mutant (Humanized) In Complex With Human Lysozyme	20.6	105	1%	2369	80%
P30493.1	RecName: Full=HLA class I histocompatibility antigen, B-55 alpha chain; AltName: Full=MHC class I antigen B*55; AltName: Full=Bw-55; AltName: Full=HLA class I histocompatibility antigen, B-12 alpha chain; Flags: Precursor	20.6	220	3%	2369	100%
NP_703144.2	killer cell immunoglobulin-like receptor 3DL3 precursor [Homo sapiens]	20.6	489	6%	2369	100%
NP_002113.2	HLA class II histocompatibility antigen, DQ alpha 1 chain precursor [Homo sapiens]	20.6	282	5%	2369	100%
1JK8_A	Chain A, Crystal Structure Of A Human Insulin Peptide-Hla-Dq8 Complex	20.6	217	3%	2369	80%
CAC03907.1	T-cell receptor beta chain [Homo sapiens]	20.6	110	1%	2369	100%
Q31610.1	RecName: Full=HLA class I histocompatibility antigen, B-81 alpha chain; AltName: Full=MHC class I antigen B*81; AltName: Full=B'DT; Flags: Precursor	20.6	301	4%	2369	100%
NP_443123.1	peptidoglycan recognition protein 3 precursor [Homo sapiens]	20.6	371	4%	2369	100%
NP_000467.1	adenylate kinase isoenzyme 1 [Homo sapiens]	20.6	140	1%	2369	100%
P08047.3	RecName: Full=Transcription factor Sp1	20.6	750	12%	2369	100%
NP_001814.2	creatine kinase B-type [Homo sapiens]	20.6	227	4%	2369	83%
NP_002975.1	C-C motif chemokine 4 isoform 1 precursor [Homo sapiens] >sp\|P13236.1\|CCL4_HUMAN RecName: Full=C-C motif chemokine 4; AltName: Full=Small-inducible cytokine A4; AltName: Full=Macrophage inflammatory protein 1-beta; Short=MIP-1-beta; AltName: Full=MIP-1-beta(1-69); AltName: Full=T-cell activation protein 2; Short=ACT-2; AltName: Full=PAT 744; AltName: Full=Protein H400; AltName: Full=SIS-gamma; AltName: Full=Lymphocyte activation gene 1 protein; Short=LAG-1; AltName: Full=HC21; AltName: Full=G-26 T-lymphocyte-secreted protein; Contains: RecName: Full=MIP-1-beta(3-69); Flags: Precursor >gb\|AAA51576.1\| act-2 protein precursor [Homo sapiens]	20.6	109	1%	2369	83%
3LU9_B	Chain B, Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1 >pdb\|3LU9\|E Chain E, Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1	20.6	348	4%	2369	100%
Q53H80.2	RecName: Full=Akirin-2	20.6	205	2%	2369	83%
NP_005308.1	granzyme M precursor [Homo sapiens]	20.6	294	4%	2369	100%
NP_115850.1	sperm protein associated with the nucleus on the X chromosome B/F [Homo sapiens]	20.6	139	2%	2369	100%
NP_065396.1	killer cell immunoglobulin-like receptor 2DL5A precursor [Homo sapiens]	20.6	584	9%	2369	100%
CAC29067.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.6	136	1%	2369	100%
NP_006266.2	splicing factor, arginine/serine-rich 6 [Homo sapiens]	20.6	594	6%	2369	100%
NP_004206.1	receptor-binding cancer antigen expressed on SiSo cells [Homo sapiens] >ref\|NP_936056.1\| receptor-binding cancer antigen expressed on SiSo cells [Homo sapiens] >sp\|O00559.1\|RCAS1_HUMAN RecName: Full=Receptor-binding cancer antigen expressed on SiSo cells; AltName: Full=Cancer-associated surface antigen RCAS1; AltName: Full=Estrogen receptor-binding fragment-associated gene 9 protein	20.6	291	4%	2369	100%
NP_663306.1	mitogen-activated protein kinase kinase kinase 7 isoform D [Homo sapiens]	20.6	404	5%	2369	100%
NP_116741.1	C-C motif chemokine 15 precursor [Homo sapiens]	20.6	141	1%	2369	85%
NP_003476.3	ovarian cancer G-protein coupled receptor 1 [Homo sapiens] >ref\|NP_001171147.1\| ovarian cancer G-protein coupled receptor 1 [Homo sapiens]	20.6	538	6%	2369	100%
Q9UHA7.1	RecName: Full=Interleukin-1 family member 6; Short=IL-1F6; AltName: Full=Interleukin-1 epsilon; Short=IL-1 epsilon; AltName: Full=FIL1 epsilon	20.6	153	2%	2369	85%
P30462.1	RecName: Full=HLA class I histocompatibility antigen, B-14 alpha chain; AltName: Full=MHC class I antigen B*14; Flags: Precursor	20.6	291	4%	2369	100%
1DN0_A	Chain A, Structure Of The Fab Fragment From A Human Igm Cold Agglutinin >pdb\|1DN0\|C Chain C, Structure Of The Fab Fragment From A Human Igm Cold Agglutinin	20.6	209	3%	2369	100%
1JV5_B	Chain B, Anti-Blood Group A Fv	20.6	154	2%	2369	83%
P30492.1	RecName: Full=HLA class I histocompatibility antigen, B-54 alpha chain; AltName: Full=MHC class I antigen B*54; AltName: Full=Bw-54; AltName: Full=Bw-22; Flags: Precursor	20.6	220	3%	2369	100%
CAB51305.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.6	116	1%	2369	100%
NP_001243.1	CD70 antigen [Homo sapiens]	20.6	192	3%	2369	100%
Q9HCN6.2	RecName: Full=Platelet glycoprotein VI; Short=GPVI; AltName: Full=Glycoprotein 6; Flags: Precursor	20.6	306	4%	2369	100%
CAB51717.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	106	1%	2369	100%
NP_065126.2	peptidoglycan recognition protein 4 precursor [Homo sapiens]	20.6	432	5%	2369	100%
1HXM_B	Chain B, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR >pdb\|1HXM\|D Chain D, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR >pdb\|1HXM\|F Chain F, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR >pdb\|1HXM\|H Chain H, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR	20.6	240	3%	2369	100%
Q31612.1	RecName: Full=HLA class I histocompatibility antigen, B-73 alpha chain; AltName: Full=MHC class I antigen B*73; Flags: Precursor	20.6	215	3%	2369	100%
NP_001759.3	T-cell surface glycoprotein CD8 alpha chain isoform 1 precursor [Homo sapiens] >ref\|NP_001139345.1\| T-cell surface glycoprotein CD8 alpha chain isoform 1 precursor [Homo sapiens]	20.6	154	2%	2369	100%
NP_003259.2	toll-like receptor 5 precursor [Homo sapiens]	20.6	964	13%	2369	100%
NP_005505.2	major histocompatibility complex, class I, B precursor [Homo sapiens] >sp\|P01889.3\|1B07_HUMAN RecName: Full=HLA class I histocompatibility antigen, B-7 alpha chain; AltName: Full=MHC class I antigen B*7; Flags: Precursor	20.6	304	4%	2369	100%
P30480.1	RecName: Full=HLA class I histocompatibility antigen, B-42 alpha chain; AltName: Full=MHC class I antigen B*42; Flags: Precursor	20.6	304	4%	2369	100%
Q96A28.1	RecName: Full=SLAM family member 9; AltName: Full=CD2 family member 10; Short=CD2F-10; AltName: Full=CD84 homolog 1; Short=CD84-H1; Flags: Precursor	20.6	394	6%	2369	100%
NP_060294.1	E3 ubiquitin-protein ligase MARCH5 [Homo sapiens] >sp\|Q9NX47.1\|MARH5_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH5; AltName: Full=Membrane-associated RING finger protein 5; AltName: Full=Membrane-associated RING-CH protein V; Short=MARCH-V; AltName: Full=RING finger protein 153; AltName: Full=Mitochondrial ubiquitin ligase; Short=MITOL	20.6	229	3%	2369	100%
NP_003338.1	ubiquitin-conjugating enzyme E2 L3 [Homo sapiens]	20.6	188	3%	2369	100%
NP_009167.1	calcium-binding protein p22 [Homo sapiens]	20.6	158	2%	2369	85%
CAC28901.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	20.6	178	2%	2369	100%
Q29836.1	RecName: Full=HLA class I histocompatibility antigen, B-67 alpha chain; AltName: Full=MHC class I antigen B*67; Flags: Precursor	20.6	286	4%	2369	100%
NP_115945.4	interleukin-1 family member 10 [Homo sapiens] >ref\|NP_775184.1\| interleukin-1 family member 10 [Homo sapiens]	20.6	106	1%	2369	83%
CAC28907.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	20.6	153	2%	2369	100%
CAC28004.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.6	72.5	1%	2369	83%
CAB51722.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	139	2%	2369	100%
2ESG_C	Chain C, Solution Structure Of The Complex Between Immunoglobulin Iga1 And Human Serum Albumin	20.6	357	4%	2369	83%
NP_071427.2	tenomodulin [Homo sapiens]	20.6	393	6%	2369	85%
CAC28912.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	20.6	166	2%	2369	100%
NP_005569.1	lipoma-preferred partner isoform a [Homo sapiens] >ref\|NP_001161143.1\| lipoma-preferred partner isoform a [Homo sapiens]	20.6	494	7%	2369	100%
NP_001445.2	forkhead box protein J1 [Homo sapiens]	20.6	300	5%	2369	100%
3FCT_B	Chain B, Mature Metal Chelatase Catalytic Antibody With Hapten >pdb\|3FCT\|D Chain D, Mature Metal Chelatase Catalytic Antibody With Hapten >pdb\|1NGW\|H Chain H, Chimeric Affinity Matured Fab 7g12 Complexed With Mesoporphyrin >pdb\|1NGW\|B Chain B, Chimeric Affinity Matured Fab 7g12 Complexed With Mesoporphyrin	20.6	207	3%	2369	100%
NP_002155.1	indoleamine 2,3-dioxygenase 1 [Homo sapiens]	20.6	587	7%	2369	100%
NP_000367.1	vitamin D3 receptor [Homo sapiens] >ref\|NP_001017535.1\| vitamin D3 receptor [Homo sapiens]	20.6	344	4%	2369	100%
CAC03882.1	T-cell receptor beta chain [Homo sapiens]	20.6	125	1%	2369	100%
NP_000306.1	parathyroid hormone preproprotein [Homo sapiens]	20.6	119	1%	2369	83%
CAB51730.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.6	118	1%	2369	80%
NP_002161.2	interferon alpha-8 precursor [Homo sapiens]	20.6	157	2%	2369	100%
P30495.1	RecName: Full=HLA class I histocompatibility antigen, B-56 alpha chain; AltName: Full=MHC class I antigen B*56; AltName: Full=Bw-56; AltName: Full=Bw-22; Flags: Precursor	20.6	236	3%	2369	100%
CAB52137.1	calpain [Homo sapiens]	20.6	628	7%	2369	100%
CAC28891.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	20.6	124	1%	2369	100%
NP_110382.3	thioredoxin-related transmembrane protein 1 precursor [Homo sapiens]	20.6	344	5%	2369	100%
NP_060796.1	GTPase IMAP family member 4 [Homo sapiens] >sp\|Q9NUV9.1\|GIMA4_HUMAN RecName: Full=GTPase IMAP family member 4; AltName: Full=Immunity-associated protein 4; AltName: Full=Immunity-associated nucleotide 1 protein; Short=IAN-1; Short=hIAN1	20.6	324	4%	2369	100%
NP_073568.2	nuclear ubiquitous casein and cyclin-dependent kinases substrate [Homo sapiens]	20.2	276	3%	3178	83%
NP_004022.2	interferon regulatory factor 7 isoform d [Homo sapiens]	20.2	524	6%	3178	100%
NP_001563.2	interferon regulatory factor 7 isoform a [Homo sapiens]	20.2	490	5%	3178	100%
P10316.2	RecName: Full=HLA class I histocompatibility antigen, A-69 alpha chain; AltName: Full=MHC class I antigen A*69; AltName: Full=Aw-69; AltName: Full=HLA class I histocompatibility antigen, A-28 alpha chain	20.2	232	3%	3106	100%
P18462.1	RecName: Full=HLA class I histocompatibility antigen, A-25 alpha chain; AltName: Full=MHC class I antigen A*25; AltName: Full=HLA class I histocompatibility antigen, A-10 alpha chain; Flags: Precursor	20.2	267	3%	3106	100%
NP_002107.3	HLA class I histocompatibility antigen, A-1 alpha chain precursor [Homo sapiens] >sp\|P04439.2\|1A03_HUMAN RecName: Full=HLA class I histocompatibility antigen, A-3 alpha chain; AltName: Full=MHC class I antigen A*3; Flags: Precursor	20.2	290	5%	3106	100%
P30450.2	RecName: Full=HLA class I histocompatibility antigen, A-26 alpha chain; AltName: Full=MHC class I antigen A*26; Flags: Precursor	20.2	284	4%	3106	100%
P05534.2	RecName: Full=HLA class I histocompatibility antigen, A-24 alpha chain; AltName: Full=MHC class I antigen A*24; AltName: Full=Aw-24; AltName: Full=HLA class I histocompatibility antigen, A-9 alpha chain; Flags: Precursor	20.2	253	3%	3106	83%
Q09160.1	RecName: Full=HLA class I histocompatibility antigen, A-80 alpha chain; AltName: Full=MHC class I antigen A*80; AltName: Full=Aw-80; AltName: Full=HLA class I histocompatibility antigen, A-1 alpha chain; Flags: Precursor	20.2	242	3%	3106	85%
P30443.1	RecName: Full=HLA class I histocompatibility antigen, A-1 alpha chain; AltName: Full=MHC class I antigen A*1; Flags: Precursor	20.2	306	5%	3106	85%
P30453.1	RecName: Full=HLA class I histocompatibility antigen, A-34 alpha chain; AltName: Full=MHC class I antigen A*34; AltName: Full=Aw-34; AltName: Full=HLA class I histocompatibility antigen, A-10 alpha chain; Flags: Precursor	20.2	250	3%	3106	100%
P01892.1	RecName: Full=HLA class I histocompatibility antigen, A-2 alpha chain; AltName: Full=MHC class I antigen A*2; Flags: Precursor	20.2	234	3%	3106	100%
P30455.1	RecName: Full=HLA class I histocompatibility antigen, A-36 alpha chain; AltName: Full=MHC class I antigen A*36; AltName: Full=Aw-36; Flags: Precursor	20.2	306	5%	3106	85%
P30456.1	RecName: Full=HLA class I histocompatibility antigen, A-43 alpha chain; AltName: Full=MHC class I antigen A*43; AltName: Full=Aw-43; Flags: Precursor	20.2	318	4%	3106	100%
P01891.4	RecName: Full=HLA class I histocompatibility antigen, A-68 alpha chain; AltName: Full=MHC class I antigen A*68; AltName: Full=Aw-68; AltName: Full=HLA class I histocompatibility antigen, A-28 alpha chain; Flags: Precursor	20.2	267	3%	3106	100%
P13746.1	RecName: Full=HLA class I histocompatibility antigen, A-11 alpha chain; AltName: Full=MHC class I antigen A*11; Flags: Precursor	20.2	289	5%	3106	100%
P30457.1	RecName: Full=HLA class I histocompatibility antigen, A-66 alpha chain; AltName: Full=MHC class I antigen A*66; AltName: Full=Aw-66; AltName: Full=HLA class I histocompatibility antigen, A-10 alpha chain; Flags: Precursor	20.2	267	3%	3106	100%
P30447.1	RecName: Full=HLA class I histocompatibility antigen, A-23 alpha chain; AltName: Full=MHC class I antigen A*23; AltName: Full=HLA class I histocompatibility antigen, A-9 alpha chain; Flags: Precursor	20.2	253	3%	3106	83%
Q3LIE5.1	RecName: Full=Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase; AltName: Full=CDP-choline phosphohydrolase; AltName: Full=ADPRibase-Mn	19.7	350	4%	4264	100%
NP_001180345.1	ATP-dependent RNA helicase DDX3X isoform 2 [Homo sapiens]	20.2	543	7%	3178	100%
3KDM_L	Chain L, Crystal Structure Of Human Anti-Steroid Fab 5f2 In Complex W Testosterone >pdb\|3KDM\|A Chain A, Crystal Structure Of Human Anti-Steroid Fab 5f2 In Complex W Testosterone	20.2	205	2%	3178	100%
2KQN_A	Chain A, Solution Structure Of The Al-09 H87y Immunoglobulin Light Ch Variable Domain >pdb\|2KQN\|B Chain B, Solution Structure Of The Al-09 H87y Immunoglobulin Light Ch Variable Domain	20.2	105	2%	3178	100%
3KFD_I	Chain I, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|J Chain J, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|K Chain K, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|L Chain L, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily	20.2	139	2%	3178	80%
3KFD_E	Chain E, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|F Chain F, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|G Chain G, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|H Chain H, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily	20.2	36.1	0%	3178	100%
NP_001177694.1	killer cell lectin-like receptor subfamily F member 2 [Homo sapiens] >gb\|ADC80446.1\| killer cell lectin-like receptor subfamily F member 2 [Homo sapiens]	20.2	172	2%	3178	100%
3JWD_H	Chain H, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility >pdb\|3JWD\|P Chain P, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility >pdb\|3JWO\|H Chain H, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility	20.2	207	3%	3178	85%
2WNP_F	Chain F, M-Ficolin Mutant Y271f	20.2	194	2%	3178	100%
ACN63292.1	B cell antibody heavy chain variable region [Homo sapiens]	20.2	108	1%	3178	83%
ACN63277.1	B cell antibody heavy chain variable region [Homo sapiens]	20.2	152	2%	3178	100%
ACN63271.1	B cell antibody heavy chain variable region [Homo sapiens]	20.2	88.0	1%	3178	100%
NP_001158159.1	protein THEMIS isoform 3 [Homo sapiens]	20.2	659	9%	3178	100%
NP_001158157.1	protein THEMIS isoform 1 [Homo sapiens]	20.2	727	10%	3178	100%
Q9BUD6.2	RecName: Full=Spondin-2; AltName: Full=Mindin; AltName: Full=Differentially expressed in cancerous and non-cancerous lung cells 1; Short=DIL-1; Flags: Precursor	20.2	123	1%	3178	100%
2WBJ_D	Chain D, Tcr Complex >pdb\|2WBJ\|H Chain H, Tcr Complex	20.2	174	2%	3178	83%
3FZU_H	Chain H, Igg1 Fab Characterized By HD EXCHANGE >pdb\|3FZU\|C Chain C, Igg1 Fab Characterized By HD EXCHANGE	20.2	187	3%	3178	100%
3GBM_H	Chain H, Crystal Structure Of Fab Cr6261 In Complex With A H5n1 Influenza Virus Hemagglutinin >pdb\|3GBM\|I Chain I, Crystal Structure Of Fab Cr6261 In Complex With A H5n1 Influenza Virus Hemagglutinin.	20.2	225	3%	3178	85%
2WA0_A	Chain A, Crystal Structure Of The Human Magea4	20.2	156	2%	3178	100%
ACJ37268.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	20.2	86.3	1%	3178	83%
NP_001138758.1	mu-type opioid receptor isoform MOR-1B5 [Homo sapiens]	20.2	642	9%	3178	100%
NP_001138757.1	mu-type opioid receptor isoform MOR-1B4 [Homo sapiens]	20.2	593	9%	3178	100%
3D34_A	Chain A, Structure Of The F-Spondin Domain Of Mindin >pdb\|3D34\|B Chain B, Structure Of The F-Spondin Domain Of Mindin	20.2	144	1%	3178	100%
NP_001138371.1	CD209 antigen isoform 8 [Homo sapiens]	20.2	221	2%	3178	100%
3EYG_A	Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes >pdb\|3EYH\|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes	20.2	109	1%	3178	83%
3CBC_A	Chain A, Crystal Structure Of Siderocalin (Ngal, Lipocalin 2) Y106f Complexed With Ferric Enterobactin >pdb\|3CBC\|B Chain B, Crystal Structure Of Siderocalin (Ngal, Lipocalin 2) Y106f Complexed With Ferric Enterobactin >pdb\|3CBC\|C Chain C, Crystal Structure Of Siderocalin (Ngal, Lipocalin 2) Y106f Complexed With Ferric Enterobactin	20.2	180	2%	3178	100%
3BY0_A	Chain A, Crystal Structure Of Siderocalin (Ngal, Lipocalin 2) W79a- R81a Complexed With Ferric Enterobactin >pdb\|3BY0\|B Chain B, Crystal Structure Of Siderocalin (Ngal, Lipocalin 2) W79a- R81a Complexed With Ferric Enterobactin >pdb\|3BY0\|C Chain C, Crystal Structure Of Siderocalin (Ngal, Lipocalin 2) W79a- R81a Complexed With Ferric Enterobactin	20.2	180	2%	3178	100%
3D85_B	Chain B, Crystal Structure Of Il-23 In Complex With Neutralizing Fab	20.2	256	4%	3178	83%
3CDY_A	Chain A, Al-09 H87y, Immuglobulin Light Chain Variable Domain >pdb\|3CDY\|B Chain B, Al-09 H87y, Immuglobulin Light Chain Variable Domain	20.2	105	2%	3178	100%
CAR62541.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	71.7	0%	3178	85%
CAR63064.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	67.5	0%	3178	85%
CAR63023.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	51.5	0%	3178	85%
CAR63020.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	104	1%	3178	71%
CAR63015.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	89.7	1%	3178	100%
CAR63008.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	140	2%	3178	85%
CAR62991.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	137	1%	3178	100%
CAR62963.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	103	1%	3178	83%
CAR62962.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	53.2	1%	3178	61%
CAR62910.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	103	1%	3178	85%
CAR62908.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	54.5	0%	3178	100%
CAR62904.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	51.5	0%	3178	85%
CAR62875.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	103	1%	3178	83%
CAR62855.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	104	1%	3178	100%
CAR62846.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	54.1	0%	3178	75%
CAR62844.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	105	1%	3178	83%
CAR62828.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	67.9	0%	3178	85%
CAR62763.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	71.3	0%	3178	85%
CAR62752.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	85.9	1%	3178	100%
CAR62695.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.2	155	3%	3178	100%
CAR62693.1	immunoglobulin kappa chain variable region [Homo sapiens]	20.2	39.0	0%	3178	100%
CAR62659.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	38.6	0%	3178	100%
CAR62651.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	68.7	0%	3178	85%
CAR62650.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	100	1%	3178	100%
CAR62631.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	105	1%	3178	85%
CAR62630.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	87.2	1%	3178	85%
CAR62614.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	89.7	1%	3178	83%
CAR62608.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	83.4	1%	3178	85%
CAR62604.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	85.1	1%	3178	85%
CAR62603.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	55.8	0%	3178	85%
CAR62559.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	36.9	0%	3178	100%
CAR62558.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	53.7	0%	3178	100%
CAR62551.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	119	2%	3178	83%
NP_001180346.1	ATP-dependent RNA helicase DDX3X isoform 3 [Homo sapiens]	20.2	541	7%	3178	100%
NP_001129631.1	OTU domain-containing protein 5 isoform c [Homo sapiens]	20.2	255	3%	3178	100%
NP_008831.3	interferon alpha-1/13 precursor [Homo sapiens]	20.2	282	3%	3178	100%
2EIZ_A	Chain A, Crystal Structure Of Humanized Hyhel-10 Fv Mutant(Hw47y)- Hen Lysozyme Complex >pdb\|2EKS\|A Chain A, Crystal Structure Of Humanized Hyhel-10 Fv-Hen Lysozyme Complex >pdb\|2YSS\|A Chain A, Crystal Structure Of Humanized Hyhel-10 Fv Mutant(Hq39kw47y)-Hen Lysozyme Complex	20.2	105	1%	3178	100%
CAP72493.1	interleukin 4 [Homo sapiens]	20.2	239	3%	3178	100%
2JHH_C	Chain C, Structure Of Globular Heads Of M-Ficolin At Acidic Ph >pdb\|2JHH\|F Chain F, Structure Of Globular Heads Of M-Ficolin At Acidic Ph >pdb\|2JHL\|F Chain F, Structure Of Globular Heads Of M-Ficolin Complexed With Sialic Acid >pdb\|2JHM\|F Chain F, Structure Of Globular Heads Of M-Ficolin At Neutral Ph	20.2	194	2%	3178	100%
2DO4_A	Chain A, Solution Structure Of The Rna Binding Domain Of Squamous Cell Carcinoma Antigen Recognized By T Cells 3	20.2	104	1%	3178	83%
2DBG_A	Chain A, Solution Structure Of The Pyrin (Paad-Dapin) Domain In Human Myeloid Cell Nuclear Differentiation Antigen	20.2	67.9	0%	3178	83%
ABR67881.1	T cell receptor delta chain variable region [Homo sapiens]	20.2	69.6	1%	3178	71%
2J5Z_A	Chain A, H-Ficolin Complexed To Galactose >pdb\|2J5Z\|B Chain B, H-Ficolin Complexed To Galactose >pdb\|2J5Z\|C Chain C, H-Ficolin Complexed To Galactose >pdb\|2J60\|A Chain A, H-Ficolin Complexed To D-Fucose >pdb\|2J60\|B Chain B, H-Ficolin Complexed To D-Fucose >pdb\|2J60\|C Chain C, H-Ficolin Complexed To D-Fucose >pdb\|2J64\|A Chain A, H-Ficolin >pdb\|2J64\|B Chain B, H-Ficolin >pdb\|2J64\|C Chain C, H-Ficolin	20.2	240	3%	3178	100%
NP_002085.2	eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform 1 [Homo sapiens]	20.2	345	5%	3178	100%
NP_001123478.1	eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform 2 [Homo sapiens]	20.2	364	6%	3178	100%
NP_001129629.1	OTU domain-containing protein 5 isoform b [Homo sapiens] >ref\|NP_001129630.1\| OTU domain-containing protein 5 isoform b [Homo sapiens]	20.2	421	5%	3178	100%
NP_001138367.1	CD209 antigen isoform 7 [Homo sapiens]	20.2	329	3%	3178	100%
NP_001138365.1	CD209 antigen isoform 5 [Homo sapiens]	20.2	264	2%	3178	100%
NP_001008505.2	mu-type opioid receptor isoform MOR-1X [Homo sapiens]	20.2	667	9%	3178	100%
Q6P5W5.3	RecName: Full=Zinc transporter ZIP4; AltName: Full=Zrt- and Irt-like protein 4; Short=ZIP-4; AltName: Full=Solute carrier family 39 member 4; Flags: Precursor	20.2	722	9%	3178	100%
2BO2_A	Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Calcium >pdb\|2BO2\|B Chain B, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Calcium. >pdb\|2BOU\|A Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Barium. >pdb\|2BOX\|A Chain A, Egf Domains 1,2,5 Of Human Emr2, A 7-Tm Immune System Molecule, In Complex With Strontium.	20.2	124	1%	3178	83%
2H26_A	Chain A, Human Cd1b In Complex With Endogenous Phosphatidylcholine And Spacer	20.2	292	3%	3178	100%
ABG38452.1	immunglobulin heavy chain variable region [Homo sapiens]	20.2	142	2%	3178	100%
ABG38433.1	immunglobulin heavy chain variable region [Homo sapiens]	20.2	88.5	1%	3178	100%
ABG38357.1	immunoglobulin light chain variable region [Homo sapiens]	20.2	118	1%	3178	100%
CAJ90648.1	immunoglobulin light chain variable region [Homo sapiens]	20.2	90.1	1%	3178	83%
CAJ90631.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	35.6	0%	3178	60%
CAJ90633.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	150	2%	3178	100%
2B6B_D	Chain D, Cryo Em Structure Of Dengue Complexed With Crd Of Dc-Sign	20.2	172	1%	3178	100%
2FRG_P	Chain P, Structure Of The Immunoglobulin-Like Domain Of Human Tlt-1	20.2	100	1%	3178	100%
2JF1_A	Chain A, Crystal Structure Of The Filamin A Repeat 21 Complexed With The Integrin Beta2 Cytoplasmic Tail Peptide	20.2	53.7	0%	3178	80%
2ERJ_B	Chain B, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2 >pdb\|2ERJ\|F Chain F, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2	20.2	189	2%	3178	80%
NP_001091949.1	HLA class I histocompatibility antigen, alpha chain F isoform 1 precursor [Homo sapiens]	20.2	428	5%	3178	100%
NP_005276.2	neuropeptides B/W receptor type 1 [Homo sapiens]	20.2	520	8%	3178	100%
NP_001138754.1	mu-type opioid receptor isoform MOR-1B1 [Homo sapiens]	20.2	578	9%	3178	100%
NP_001138756.1	mu-type opioid receptor isoform MOR-1B3 [Homo sapiens]	20.2	615	9%	3178	100%
NP_001138755.1	mu-type opioid receptor isoform MOR-1B2 [Homo sapiens]	20.2	578	9%	3178	100%
NP_001008504.2	mu-type opioid receptor isoform MOR-1A [Homo sapiens]	20.2	593	9%	3178	100%
NP_001093250.1	proteasome subunit beta type-11 precursor [Homo sapiens]	20.2	241	3%	3178	100%
NP_061823.2	HLA class I histocompatibility antigen, alpha chain F isoform 2 precursor [Homo sapiens]	20.2	311	4%	3178	100%
NP_001138369.1	CD209 antigen isoform 4 [Homo sapiens]	20.2	313	3%	3178	100%
NP_001138368.1	CD209 antigen isoform 3 [Homo sapiens]	20.2	330	3%	3178	100%
NP_060072.1	OTU domain-containing protein 5 isoform a [Homo sapiens] >sp\|Q96G74.1\|OTUD5_HUMAN RecName: Full=OTU domain-containing protein 5; AltName: Full=Deubiquitinating enzyme A; Short=DUBA	20.2	421	5%	3178	100%
Q7LGC8.3	RecName: Full=Carbohydrate sulfotransferase 3; AltName: Full=Chondroitin 6-sulfotransferase; AltName: Full=Chondroitin 6-O-sulfotransferase 1; Short=C6ST-1; AltName: Full=Galactose/N-acetylglucosamine/N-acetylglucosamine 6-O-sulfotransferase 0; Short=GST-0	20.2	431	6%	3178	100%
NP_001092099.1	interferon regulatory factor 5 isoform d [Homo sapiens]	20.2	378	5%	3178	83%
NP_001138366.1	CD209 antigen isoform 6 [Homo sapiens]	20.2	264	2%	3178	100%
NP_002179.2	interleukin-13 precursor [Homo sapiens]	20.2	172	2%	3178	100%
NP_004410.3	dual specificity protein phosphatase 5 [Homo sapiens]	20.2	259	3%	3178	100%
NP_705872.1	semaphorin-6D isoform 5 precursor [Homo sapiens]	20.2	532	7%	3178	100%
NP_001870.3	mannan-binding lectin serine protease 1 isoform 1 precursor [Homo sapiens]	20.2	531	7%	3178	100%
NP_001010923.1	protein THEMIS isoform 2 [Homo sapiens]	20.2	708	9%	3178	100%
P30511.2	RecName: Full=HLA class I histocompatibility antigen, alpha chain F; AltName: Full=HLA F antigen; AltName: Full=Leukocyte antigen F; AltName: Full=CDA12; Flags: Precursor	20.2	311	4%	3178	100%
2QZH_A	Chain A, Scr23 OF DAF FROM THE NMR STRUCTURE 1NWV FITTED INTO A Cryoem Reconstruction Of Cvb3-Rd Complexed With Daf	20.2	73.0	1%	3178	75%
2HYM_B	Chain B, Nmr Based Docking Model Of The Complex Between The Human Type I Interferon Receptor And Human Interferon Alpha-2	20.2	119	1%	3178	100%
1GA3_A	Chain A, Nmr Structure Of Interleukin-13	20.2	141	1%	3178	100%
NP_001027019.1	mannan-binding lectin serine protease 1 isoform 3 precursor [Homo sapiens]	20.2	305	3%	3178	100%
NP_444260.1	myosin light chain kinase, smooth muscle isoform 8 [Homo sapiens]	20.2	71.3	1%	3178	83%
NP_783856.1	protein SSX4 isoform b [Homo sapiens] >ref\|NP_001035702.1\| protein SSX4 isoform b [Homo sapiens]	20.2	118	1%	3178	100%
AAC52038.1	histone deacetylase 3 [Homo sapiens]	20.2	378	5%	3178	100%
AAC41985.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	20.2	124	1%	3178	100%
AAA36077.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	20.2	152	2%	3178	83%
AAC41961.1	MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.2	202	3%	3178	100%
AAC41959.1	MHC class II HLA-DQ-alpha chain [Homo sapiens] >gb\|AAC41960.1\| MHC class II HLA-DQ-alpha chain [Homo sapiens]	20.2	202	3%	3178	100%
AAY57143.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	122	1%	3178	100%
AAY57180.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	124	1%	3178	100%
AAY57181.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	124	1%	3178	100%
AAY57144.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	137	1%	3178	100%
AAY57137.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	86.8	1%	3178	100%
AAY33420.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	53.7	1%	3178	62%
AAY33437.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	89.3	1%	3178	83%
AAY33410.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	54.5	1%	3178	62%
AAY33470.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	104	1%	3178	83%
AAY33471.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	104	1%	3178	83%
AAY33458.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	71.7	1%	3178	83%
AAY33419.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	105	1%	3178	100%
AAY33207.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	104	1%	3178	85%
AAY33301.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	92.3	2%	3178	60%
AAY33286.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	88.9	1%	3178	85%
AAY33260.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33294.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	88.9	1%	3178	85%
AAY33278.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	88.9	1%	3178	85%
AAY33195.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	85.9	1%	3178	83%
AAY33385.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	105	1%	3178	100%
AAY33288.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	138	1%	3178	100%
AAY33351.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	36.1	0%	3178	62%
AAY33348.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	102	1%	3178	100%
AAY33264.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	121	1%	3178	100%
AAY33368.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	102	2%	3178	83%
AAY33208.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	70.4	1%	3178	83%
AAY33285.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	87.6	1%	3178	85%
AAY33192.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	105	1%	3178	83%
AAY33382.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	120	1%	3178	83%
AAY33355.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	20.2	90.6	0%	3178	100%
AAY33234.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	88.0	1%	3178	83%
AAY33259.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	20.2	86.3	0%	3178	100%
AAW65985.1	chromosome-associated protein E [Homo sapiens]	20.2	721	11%	3178	100%
NP_444259.1	myosin light chain kinase, smooth muscle isoform 7 [Homo sapiens]	20.2	71.3	1%	3178	83%
AAC50775.1	PRSM1 [Homo sapiens]	20.2	225	2%	3178	85%
Q8IZS7.1	RecName: Full=C-type lectin-like domain family 1; AltName: Full=Dendritic cell-associated lectin 1; Short=DC-associated lectin-1; Short=DCAL-1	20.2	223	3%	3178	100%
NP_620386.1	cell surface glycoprotein CD200 receptor 1 isoform c [Homo sapiens]	20.2	278	4%	3178	83%
AAL04539.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	20.2	104	1%	3178	83%
NP_776246.1	sperm acrosome membrane-associated protein 3 [Homo sapiens] >sp\|Q8IXA5.1\|SACA3_HUMAN RecName: Full=Sperm acrosome membrane-associated protein 3; AltName: Full=Sperm lysozyme-like protein 1; AltName: Full=Lysozyme-like protein 3; AltName: Full=Lysozyme-like acrosomal sperm-specific secretory protein ALLP-17; AltName: Full=Sperm protein reactive with antisperm antibodies; Short=Sperm protein reactive with ASA; AltName: Full=Cancer/testis antigen 54; Short=CT54; Contains: RecName: Full=Sperm acrosome membrane-associated protein 3, membrane form; Contains: RecName: Full=Sperm acrosome membrane-associated protein 3, processed form	20.2	188	3%	3178	85%
AAC08351.1	histone deacetylase 3 [Homo sapiens]	20.2	171	2%	3178	83%
NP_079242.2	semaphorin-6D isoform 6 precursor [Homo sapiens]	20.2	378	5%	3178	100%
2AW2_B	Chain B, Crystal Structure Of The Human Btla-Hvem Complex >pdb\|2AW2\|Y Chain Y, Crystal Structure Of The Human Btla-Hvem Complex	20.2	38.6	0%	3178	100%
1WT5_A	Chain A, The Crystal Structure Of A Humanized Antibody Fv 528 >pdb\|1WT5\|B Chain B, The Crystal Structure Of A Humanized Antibody Fv 528	20.2	156	2%	3178	85%
1YVH_A	Chain A, Crystal Structure Of The C-Cbl Tkb Domain In Complex With The Aps Ptyr-618 Phosphopeptide	20.2	343	4%	3178	100%
NP_001015070.1	killer-cell Ig-like receptor [Homo sapiens] >emb\|CAF74822.1\| killer-cell Ig-like receptor [Homo sapiens]	20.2	299	3%	3178	100%
1PW3_A	Chain A, Crystal Structure Of Jtor68s >pdb\|1PW3\|B Chain B, Crystal Structure Of Jtor68s	20.2	87.6	1%	3178	83%
1PEW_A	Chain A, High Resolution Crystal Structure Of Jto2, A Mutant Of The Non-Amyloidogenic Lamba6 Light Chain, Jto >pdb\|1PEW\|B Chain B, High Resolution Crystal Structure Of Jto2, A Mutant Of The Non-Amyloidogenic Lamba6 Light Chain, Jto	20.2	174	2%	3178	100%
2IT6_A	Chain A, Crystal Structure Of Dcsign-Crd With Man2	20.2	156	1%	3178	100%
2IT5_A	Chain A, Crystal Structure Of Dcsign-Crd With Man6	20.2	70.4	0%	3178	80%
1S9V_A	Chain A, Crystal Structure Of Hla-Dq2 Complexed With Deamidated Gliadin Peptide >pdb\|1S9V\|D Chain D, Crystal Structure Of Hla-Dq2 Complexed With Deamidated Gliadin Peptide	20.2	187	3%	3178	100%
1RZI_B	Chain B, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|D Chain D, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|F Chain F, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|H Chain H, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|J Chain J, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|L Chain L, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|N Chain N, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|P Chain P, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab	20.2	204	3%	3178	83%
1RZ8_B	Chain B, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 17b >pdb\|1RZ8\|D Chain D, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 17b	20.2	270	4%	3178	100%
1RZ7_H	Chain H, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 48d	20.2	207	3%	3178	85%
1OEY_J	Chain J, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase >pdb\|1OEY\|K Chain K, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase >pdb\|1OEY\|L Chain L, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase >pdb\|1OEY\|M Chain M, Heterodimer Of P40phox And P67phox Pb1 Domains From Human Nadph Oxidase	20.2	104	1%	3178	100%
CAD89247.1	immunoglobulin heavy chain [Homo sapiens]	20.2	105	1%	3178	85%
CAD89246.1	immunoglobulin heavy chain [Homo sapiens]	20.2	88.9	1%	3178	85%
CAD89264.1	immunoglobulin kappa light chain [Homo sapiens]	20.2	55.4	0%	3178	80%
CAD88691.1	immunoglobulin kappa light chain variable region [Homo sapiens]	20.2	20.2	1%	3178	35%
CAD88762.1	immunoglobulin heavy chain [Homo sapiens]	20.2	70.0	1%	3178	85%
CAD88722.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.2	68.3	1%	3178	100%
CAD88666.1	immunoglobulin heavy chain [Homo sapiens]	20.2	71.3	1%	3178	83%
CAD88678.1	immunoglobulin heavy chain [Homo sapiens]	20.2	190	2%	3178	100%
CAD88724.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.2	86.8	1%	3178	83%
NP_004301.1	rho-related GTP-binding protein RhoH precursor [Homo sapiens]	20.2	158	2%	3178	80%
NP_065160.1	secreted Ly-6/uPAR-related protein 1 precursor [Homo sapiens]	20.2	170	3%	3178	100%
P04637.4	RecName: Full=Cellular tumor antigen p53; AltName: Full=Tumor suppressor p53; AltName: Full=Phosphoprotein p53; AltName: Full=Antigen NY-CO-13	20.2	284	4%	3178	83%
P35225.2	RecName: Full=Interleukin-13; Short=IL-13; Flags: Precursor >emb\|CAA48823.1\| NC30 [Homo sapiens] >prf\|\|1909326A interleukin 13	20.2	172	2%	3178	100%
CAA48824.1	NC30 [Homo sapiens]	20.2	141	1%	3178	100%
CAB59403.1	T cell receptor beta chain variable region [Homo sapiens]	20.2	54.5	0%	3178	80%
CAB51310.1	immunoglobulin lambda chain variable region [Homo sapiens]	20.2	104	1%	3178	85%
Q96J02.2	RecName: Full=E3 ubiquitin-protein ligase Itchy homolog; Short=Itch; AltName: Full=Atrophin-1-interacting protein 4; Short=AIP4; AltName: Full=NFE2-associated polypeptide 1; Short=NAPP1	20.2	687	9%	3178	100%
NP_000905.3	mu-type opioid receptor isoform MOR-1 [Homo sapiens] >sp\|P35372.2\|OPRM_HUMAN RecName: Full=Mu-type opioid receptor; Short=M-OR-1; Short=MOR-1; AltName: Full=Mu opioid receptor; Short=MOP; Short=hMOP; AltName: Full=Mu opiate receptor	20.2	578	9%	3178	100%
Q13291.1	RecName: Full=Signaling lymphocytic activation molecule; AltName: Full=IPO-3; AltName: Full=CDw150; AltName: CD_antigen=CD150; Flags: Precursor	20.2	262	4%	3178	100%
NP_001233.1	CD27 antigen precursor [Homo sapiens]	20.2	221	3%	3178	100%
NP_000566.3	interleukin-1 alpha proprotein [Homo sapiens]	20.2	208	2%	3178	83%
CAC94946.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	88.5	1%	3178	100%
CAB59318.1	TCR beta chain variable region [Homo sapiens]	20.2	86.8	1%	3178	83%
NP_005856.1	thymus-specific serine protease precursor [Homo sapiens]	20.2	427	7%	3178	85%
CAC48316.1	T-cell receptor beta chain [Homo sapiens]	20.2	70.0	1%	3178	80%
NP_000580.1	interleukin-4 isoform 1 precursor [Homo sapiens]	20.2	223	3%	3178	100%
1TFG_A	Chain A, An Unusual Feature Revealed By The Crystal Structure At 2.2 Angstroms Resolution Of Human Transforming Growth Factor- Beta2	20.2	156	1%	3178	100%
NP_612117.1	protein G6b isoform G6b-C precursor [Homo sapiens]	20.2	188	2%	3178	83%
1F6L_L	Chain L, Variable Light Chain Dimer Of Anti-Ferritin Antibody	20.2	155	2%	3178	100%
1IAR_A	Chain A, Interleukin-4 RECEPTOR ALPHA CHAIN COMPLEX	20.2	191	3%	3178	100%
CAC03848.1	T-cell receptor beta chain [Homo sapiens]	20.2	69.6	0%	3178	80%
CAC03774.1	T-cell receptor beta chain [Homo sapiens]	20.2	52.0	0%	3178	100%
NP_078902.2	V-set domain-containing T-cell activation inhibitor 1 precursor [Homo sapiens] >sp\|Q7Z7D3.1\|VTCN1_HUMAN RecName: Full=V-set domain-containing T-cell activation inhibitor 1; AltName: Full=Immune costimulatory protein B7-H4; AltName: Full=B7h.5; AltName: Full=T-cell costimulatory molecule B7x; AltName: Full=Protein B7S1; Flags: Precursor >gb\|AAP37283.1\| immune costimulatory protein B7-H4 [Homo sapiens]	20.2	173	2%	3178	80%
NP_005347.3	tyrosine-protein kinase Lck precursor [Homo sapiens] >tpe\|CAD55807.1\| TPA: protein tyrosine kinase [Homo sapiens]	20.2	584	7%	3178	100%
CAC28016.1	immunoglobulin lambda light chain variable region [Homo sapiens]	20.2	124	1%	3178	83%
1ITM_A	Chain A, Analysis Of The Solution Structure Of Human Interleukin 4 Determined By Heteronuclear Three-Dimensional Nuclear Magnetic Resonance Techniques	20.2	191	3%	3178	100%
P49238.1	RecName: Full=CX3C chemokine receptor 1; Short=C-X3-C CKR-1; Short=CX3CR1; AltName: Full=Fractalkine receptor; AltName: Full=G-protein coupled receptor 13; AltName: Full=V28; AltName: Full=Beta chemokine receptor-like 1; AltName: Full=CMK-BRL-1; Short=CMK-BRL1	20.2	537	6%	3178	100%
NP_003333.1	ubiquitin-conjugating enzyme E2 G1 [Homo sapiens]	20.2	200	3%	3178	100%
NP_000317.1	retinaldehyde-binding protein 1 [Homo sapiens]	20.2	344	5%	3178	83%
CAD32732.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	106	1%	3178	83%
CAB46474.1	immunoglobulin light chain variable region [Homo sapiens]	20.2	143	2%	3178	83%
NP_001123479.1	eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform 3 [Homo sapiens]	20.2	277	4%	3178	100%
CAD32738.1	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	108	1%	3178	100%
CAC03859.1	T-cell receptor beta chain [Homo sapiens]	20.2	71.7	1%	3178	100%
NP_570900.1	dendritic cell nuclear protein 1 [Homo sapiens]	20.2	289	3%	3178	100%
NP_612119.1	protein G6b isoform G6b-E precursor [Homo sapiens]	20.2	188	2%	3178	83%
1DPT_A	Chain A, D-Dopachrome Tautomerase >pdb\|1DPT\|B Chain B, D-Dopachrome Tautomerase >pdb\|1DPT\|C Chain C, D-Dopachrome Tautomerase	20.2	141	1%	3178	100%
NP_789791.1	NACHT, LRR and PYD domains-containing protein 10 [Homo sapiens]	20.2	610	7%	3178	100%
CAB99322.2	immunoglobulin heavy chain variable region [Homo sapiens]	20.2	125	1%	3178	85%
NP_002900.2	lithostathine-1-alpha precursor [Homo sapiens]	20.2	124	1%	3178	100%
E41287	Ig heavy chain precursor V-V region (257-D) (anti-HIV-1) - human >gb\|AAA52946.1\| anti-HIV1 antibody [Homo sapiens]	20.2	68.7	1%	3178	85%
NP_002163.2	interferon alpha-14 precursor [Homo sapiens]	20.2	234	3%	3178	100%
NP_001556.2	C-X-C motif chemokine 10 precursor [Homo sapiens]	20.2	144	1%	3178	83%
NP_003874.2	histone deacetylase 3 [Homo sapiens] >sp\|O15379.2\|HDAC3_HUMAN RecName: Full=Histone deacetylase 3; Short=HD3; AltName: Full=RPD3-2; AltName: Full=SMAP45	20.2	391	5%	3178	100%
NP_000596.2	interferon alpha-2 precursor [Homo sapiens]	20.2	191	2%	3178	100%
CAB46457.1	immunoglobulin light chain variable region [Homo sapiens]	20.2	143	2%	3178	83%
P26718.1	RecName: Full=NKG2-D type II integral membrane protein; AltName: Full=NKG2-D-activating NK receptor; AltName: Full=NK cell receptor D; AltName: Full=Killer cell lectin-like receptor subfamily K member 1; AltName: CD_antigen=CD314	20.2	233	3%	3178	100%
NP_006348.1	ubiquitin-conjugating enzyme E2 E3 [Homo sapiens] >ref\|NP_872619.1\| ubiquitin-conjugating enzyme E2 E3 [Homo sapiens]	20.2	120	2%	3178	83%
NP_055296.2	DNA-(apurinic or apyrimidinic site) lyase 2 [Homo sapiens]	20.2	493	8%	3178	100%
NP_060872.1	interleukin-26 precursor [Homo sapiens]	20.2	191	2%	3178	83%
1G0Y_R	Chain R, Il-1 Receptor Type 1 Complexed With Antagonist Peptide Af10847	20.2	206	2%	3178	100%
CAC03914.1	T-cell receptor beta chain [Homo sapiens]	20.2	68.7	0%	3178	80%
Q9Y535.1	RecName: Full=DNA-directed RNA polymerase III subunit RPC8; Short=RNA polymerase III subunit C8; AltName: Full=DNA-directed RNA polymerase III subunit H; AltName: Full=RNA polymerase III subunit 22.9 kDa subunit; Short=RPC22.9	20.2	193	3%	3178	100%
Q8NET5.1	RecName: Full=NFAT activation molecule 1; AltName: Full=Calcineurin/NFAT-activating ITAM-containing protein; AltName: Full=NFAT-activating protein with ITAM motif 1; Flags: Precursor	20.2	372	5%	3178	100%
NP_004581.1	C-C motif chemokine 16 precursor [Homo sapiens]	20.2	294	3%	3178	100%
S69899	Ig heavy chain V region (clone RFTS7H), rheumatoid factor - human >emb\|CAA84376.1\| IgG, variable region, rheumatoid factor, autoantibody [Homo sapiens]	20.2	88.9	1%	3178	85%
NP_113671.3	E3 ubiquitin-protein ligase Itchy homolog [Homo sapiens]	20.2	687	9%	3178	100%
CAC03917.1	T-cell receptor beta chain [Homo sapiens]	20.2	84.6	1%	3178	83%
NP_061113.1	triggering receptor expressed on myeloid cells 1 precursor [Homo sapiens] >gb\|ABB01010.1\| triggering receptor expressed on myeloid cells 1 [Homo sapiens]	20.2	207	3%	3178	100%
NP_001159845.1	E3 ubiquitin-protein ligase MARCH1 isoform 1 [Homo sapiens] >sp\|Q8TCQ1.1\|MARH1_HUMAN RecName: Full=E3 ubiquitin-protein ligase MARCH1; AltName: Full=Membrane-associated RING finger protein 1; AltName: Full=Membrane-associated RING-CH protein I; Short=MARCH-I; AltName: Full=RING finger protein 171	20.2	192	2%	3178	83%
CAB59411.1	T cell receptor beta chain variable region [Homo sapiens]	20.2	68.7	1%	3178	80%
3G6D_A	Chain A, Crystal Structure Of The Complex Between Cnto607 Fab And Il- 13 >pdb\|3L5W\|I Chain I, Crystal Structure Of The Complex Between Il-13 And C836 Fab >pdb\|3L5W\|J Chain J, Crystal Structure Of The Complex Between Il-13 And C836 Fab >pdb\|3L5X\|A Chain A, Crystal Structure Of The Complex Between Il-13 And H2l6 Fab >pdb\|3L5Y\|A Chain A, Crystal Structure Of The Complex Between Il-13 And M1295 Fab	20.2	141	1%	3178	100%
CAB48547.1	immunoglobulin light chain variable region [Homo sapiens]	20.2	72.1	1%	3178	83%
NP_000233.1	mannose-binding protein C precursor [Homo sapiens] >sp\|P11226.2\|MBL2_HUMAN RecName: Full=Mannose-binding protein C; Short=MBP-C; AltName: Full=MBP1; AltName: Full=Mannan-binding protein; AltName: Full=Mannose-binding lectin; AltName: Full=Collectin-1; Flags: Precursor >gb\|ABB01009.1\| mannose-binding protein C [Homo sapiens]	20.2	329	5%	3178	100%
NP_076918.1	interferon alpha-1/13 precursor [Homo sapiens]	20.2	283	3%	3178	100%
CAC03968.1	T-cell receptor beta chain [Homo sapiens]	20.2	53.2	0%	3178	80%
Q15722.2	RecName: Full=Leukotriene B4 receptor 1; Short=LTB4-R 1; Short=LTB4-R1; AltName: Full=P2Y purinoceptor 7; Short=P2Y7; AltName: Full=Chemoattractant receptor-like 1; AltName: Full=G-protein coupled receptor 16	20.2	375	6%	3178	100%
NP_612118.1	protein G6b isoform G6b-D precursor [Homo sapiens]	20.2	170	2%	3178	83%
2F54_B	Chain B, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity >pdb\|2F54\|G Chain G, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity	20.2	105	2%	3178	80%
CAB59381.1	T cell receptor beta chain variable region [Homo sapiens]	20.2	69.1	0%	3178	83%
CAB59317.1	TCR beta chain variable region [Homo sapiens]	20.2	73.8	0%	3178	100%
CAC03877.1	T-cell receptor beta chain [Homo sapiens]	20.2	52.8	0%	3178	80%
P16188.2	RecName: Full=HLA class I histocompatibility antigen, A-30 alpha chain; AltName: Full=MHC class I antigen A*30; Flags: Precursor	20.2	308	6%	3178	100%
CAC03833.1	T-cell receptor beta chain [Homo sapiens]	20.2	54.5	0%	3178	80%
Q86YW5.2	RecName: Full=Trem-like transcript 1 protein; Short=TLT-1; AltName: Full=Triggering receptor expressed on myeloid cells-like protein 1; Flags: Precursor	20.2	340	5%	3178	100%
NP_000527.2	V(D)J recombination-activating protein 2 [Homo sapiens] >sp\|P55895.1\|RAG2_HUMAN RecName: Full=V(D)J recombination-activating protein 2; Short=RAG-2	20.2	359	5%	3178	100%
NP_003755.2	syntaxin-11 [Homo sapiens] >sp\|O75558.1\|STX11_HUMAN RecName: Full=Syntaxin-11	20.2	269	3%	3178	100%
NP_066978.1	CD209 antigen isoform 1 [Homo sapiens] >sp\|Q9NNX6.1\|CD209_HUMAN RecName: Full=CD209 antigen; AltName: Full=Dendritic cell-specific ICAM-3-grabbing non-integrin 1; Short=DC-SIGN1; Short=DC-SIGN; AltName: Full=C-type lectin domain family 4 member L; AltName: CD_antigen=CD209	20.2	329	3%	3178	100%
CAJ90646.1	immunoglobulin light chain variable region [Homo sapiens]	20.2	70.4	1%	3178	83%
NP_001347.3	ATP-dependent RNA helicase DDX3X isoform 1 [Homo sapiens]	20.2	560	7%	3178	100%
NP_001879.1	mu-crystallin homolog isoform 1 [Homo sapiens]	20.2	307	4%	3178	100%
NP_004452.1	phenylalanyl-tRNA synthetase alpha chain [Homo sapiens]	20.2	403	5%	3178	100%
NP_055267.1	tumor necrosis factor receptor superfamily member 21 precursor [Homo sapiens]	20.2	674	9%	3178	100%
NP_001805.3	dipeptidyl peptidase 1 isoform a preproprotein [Homo sapiens]	20.2	260	3%	3178	100%
1CD0_A	Chain A, Structure Of Human Lamda-6 Light Chain Dimer Jto >pdb\|1CD0\|B Chain B, Structure Of Human Lamda-6 Light Chain Dimer Jto	20.2	122	2%	3178	100%
P10145.1	RecName: Full=Interleukin-8; Short=IL-8; AltName: Full=C-X-C motif chemokine 8; AltName: Full=Monocyte-derived neutrophil chemotactic factor; Short=MDNCF; AltName: Full=T-cell chemotactic factor; AltName: Full=Neutrophil-activating protein 1; Short=NAP-1; AltName: Full=Protein 3-10C; AltName: Full=Granulocyte chemotactic protein 1; Short=GCP-1; AltName: Full=Monocyte-derived neutrophil-activating peptide; Short=MONAP; AltName: Full=Emoctakin; Contains: RecName: Full=MDNCF-a; AltName: Full=IL8/NAP1 form I; AltName: Full=GCP/IL-8 protein IV; Contains: RecName: Full=Interleukin-8; AltName: Full=IL-8(1-77); AltName: Full=MDNCF-b; AltName: Full=IL8/NAP1 form II; AltName: Full=GCP/IL-8 protein II; AltName: Full=(Ala-IL-8)77; Contains: RecName: Full=IL-8(5-77); Contains: RecName: Full=IL-8(6-77); AltName: Full=Lymphocyte-derived neutrophil-activating factor; Short=LYNAP; AltName: Full=Neutrophil-activating factor; Short=NAF; AltName: Full=MDNCF-c; AltName: Full=IL8/NAP1 form III; AltName: Full=GCP/IL-8 protein I; AltName: Full=(Ser-IL-8)72; Contains: RecName: Full=IL-8(7-77); AltName: Full=IL8/NAP1 form IV; AltName: Full=GCP/IL-8 protein V; Contains: RecName: Full=IL-8(8-77); AltName: Full=IL8/NAP1 form V; AltName: Full=GCP/IL-8 protein VI; Contains: RecName: Full=IL-8(9-77); AltName: Full=IL8/NAP1 form VI; AltName: Full=GCP/IL-8 protein III; Flags: Precursor	20.2	104	1%	3178	100%
NP_116032.1	interferon regulatory factor 5 isoform b [Homo sapiens] >ref\|NP_001092100.1\| interferon regulatory factor 5 isoform b [Homo sapiens] >ref\|NP_001092097.2\| interferon regulatory factor 5 isoform b [Homo sapiens]	20.2	341	4%	3178	83%
2JJU_A	Chain A, Structure Of Human Signal Regulatory Protein (Sirp) Beta >pdb\|2JJU\|B Chain B, Structure Of Human Signal Regulatory Protein (Sirp) Beta	19.7	133	2%	3243	83%
CAB46458.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	122	1%	3408	100%
CAA66153.1	immunoglobulin light chain [Homo sapiens]	19.7	72.1	0%	3418	100%
CAD89251.1	immunoglobulin kappa light chain [Homo sapiens]	19.7	54.5	0%	3671	80%
CAR62698.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.7	54.5	0%	3684	80%
CAD88705.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.7	36.9	0%	3684	80%
CAR62686.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.7	54.5	0%	3712	80%
CAB59393.1	T cell receptor beta chain variable region [Homo sapiens]	19.7	89.3	0%	3755	100%
CAC03925.1	T-cell receptor beta chain [Homo sapiens]	19.7	103	1%	3786	100%
CAC03934.1	T-cell receptor beta chain [Homo sapiens]	19.7	87.2	1%	3786	100%
2OAY_A	Chain A, Crystal Structure Of Latent Human C1-Inhibitor	19.7	460	6%	4264	100%
CAC03946.1	T-cell receptor beta chain [Homo sapiens]	19.7	70.0	0%	3923	100%
CAC03828.1	T-cell receptor beta chain [Homo sapiens]	19.7	70.0	0%	3923	100%
3MOP_G	Chain G, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|H Chain H, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|I Chain I, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|J Chain J, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2	19.7	53.7	0%	4264	85%
3L6F_A	Chain A, Structure Of Mhc Class Ii Molecule Hla-Dr1 Complexed With Phosphopeptide Mart-1	19.7	189	3%	4264	83%
3AAZ_A	Chain A, Crystal Structure Of The Humanized Recombinant Fab Fragment Of A Murine; Antibody >pdb\|3AAZ\|H Chain H, Crystal Structure Of The Humanized Recombinant Fab Fragment Of A Murine; Antibody	19.7	207	3%	4264	100%
ACU00112.1	V-set and transmembrane domain containing 1 isoform d [Homo sapiens]	19.7	187	3%	4264	75%
3JWO_L	Chain L, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility	19.7	254	3%	4264	100%
3JWD_L	Chain L, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility >pdb\|3JWD\|O Chain O, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: Layered Architecture And Basis Of Conformational Mobility	19.7	254	3%	4264	100%
3HI1_H	Chain H, Structure Of Hiv-1 Gp120 (Core With V3) In Complex With Cd4- Binding-Site Antibody F105 >pdb\|3HI1\|B Chain B, Structure Of Hiv-1 Gp120 (Core With V3) In Complex With Cd4- Binding-Site Antibody F105	19.7	191	3%	4264	83%
2W0L_A	Chain A, Crystal Structure Of The Mutant H8p From The Recombinant Variable Domain 6jal2 >pdb\|2W0L\|B Chain B, Crystal Structure Of The Mutant H8p From The Recombinant Variable Domain 6jal2 >pdb\|2W0L\|C Chain C, Crystal Structure Of The Mutant H8p From The Recombinant Variable Domain 6jal2 >pdb\|2W0L\|D Chain D, Crystal Structure Of The Mutant H8p From The Recombinant Variable Domain 6jal2	19.7	171	2%	4264	83%
2W0K_A	Chain A, Crystal Structure Of The Recombinant Variable Domain 6jal2 >pdb\|2W0K\|B Chain B, Crystal Structure Of The Recombinant Variable Domain 6jal2	19.7	137	1%	4264	83%
ACN63244.1	B cell antibody heavy chain variable region [Homo sapiens]	19.7	118	1%	4264	100%
3H9Y_A	Chain A, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3H9Y\|B Chain B, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3H9Y\|E Chain E, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3H9Z\|A Chain A, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3H9Z\|B Chain B, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3H9Z\|C Chain C, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3H9Z\|D Chain D, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3HA0\|A Chain A, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3HA0\|B Chain B, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3HA0\|C Chain C, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3HA0\|D Chain D, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3HA0\|E Chain E, Crystal Structure Of The Ige-Fc3-4 Domains >pdb\|3HA0\|F Chain F, Crystal Structure Of The Ige-Fc3-4 Domains	19.7	139	1%	4264	100%
3HC3_H	Chain H, Bha10 Igg1 Fab Double Mutant Variant - Antibody Directed At Human Ltbr	19.7	207	3%	4264	85%
3HC0_H	Chain H, Bha10 Igg1 Wild-Type Fab - Antibody Directed At Human Ltbr >pdb\|3HC0\|A Chain A, Bha10 Igg1 Wild-Type Fab - Antibody Directed At Human Ltbr	19.7	207	3%	4264	83%
3G04_B	Chain B, Crystal Structure Of The Tsh Receptor In Complex With A Thyroid-Stimulating Autoantibody	19.7	190	2%	4264	100%
2WCY_A	Chain A, Nmr Solution Structure Of Factor I-Like Modules Of Complement C7	19.7	105	1%	4264	100%
2WBJ_A	Chain A, Tcr Complex >pdb\|2WBJ\|E Chain E, Tcr Complex	19.7	188	3%	4264	83%
ACJ37290.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.7	85.9	1%	4264	85%
ACJ37284.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.7	154	2%	4264	100%
ACJ37283.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.7	83.4	1%	4264	100%
ACJ37255.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.7	138	2%	4264	85%
NP_001138753.1	mu-type opioid receptor isoform MOR-1G2 [Homo sapiens]	19.7	418	6%	4264	83%
NP_001138752.1	mu-type opioid receptor isoform MOR-1G1 [Homo sapiens] >ref\|NP_001138759.1\| mu-type opioid receptor isoform MOR1-K1 [Homo sapiens]	19.7	418	6%	4264	83%
3FJU_A	Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With Human Carboxypeptidase A1	19.7	271	3%	4264	100%
3BDX_A	Chain A, Crystal Structure Of The Unstable And Highly Fibrillogenic Pro7ser Mutant Of The Recombinant Variable Domain 6ajl2 >pdb\|3BDX\|B Chain B, Crystal Structure Of The Unstable And Highly Fibrillogenic Pro7ser Mutant Of The Recombinant Variable Domain 6ajl2 >pdb\|3BDX\|C Chain C, Crystal Structure Of The Unstable And Highly Fibrillogenic Pro7ser Mutant Of The Recombinant Variable Domain 6ajl2 >pdb\|3B5G\|A Chain A, Crystal Structure Of The Unstable And Highly Fibrillogenic Pro7ser Mutant Of The Recombinant Variable Domain 6ajl2 >pdb\|3B5G\|B Chain B, Crystal Structure Of The Unstable And Highly Fibrillogenic Pro7ser Mutant Of The Recombinant Variable Domain 6ajl2	19.7	157	2%	4264	83%
3D85_D	Chain D, Crystal Structure Of Il-23 In Complex With Neutralizing Fab	19.7	311	4%	4264	100%
CAR62545.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	120	1%	4264	83%
CAR63030.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	155	1%	4264	100%
CAR62996.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	71.3	1%	4264	71%
CAR62977.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	103	1%	4264	100%
CAR62975.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	158	1%	4264	100%
CAR62972.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	52.0	1%	4264	58%
CAR62970.1	immunoglobulin heavy chain variable region [Homo sapiens] >emb\|CAR62987.1\| immunoglobulin heavy chain variable region [Homo sapiens]	19.7	121	1%	4264	100%
CAR62968.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	116	1%	4264	100%
CAR62956.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	110	1%	4264	100%
CAR62949.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	87.2	1%	4264	83%
CAR62874.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	121	1%	4264	80%
CAR62866.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	70.0	1%	4264	83%
CAR62834.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	86.8	1%	4264	83%
CAR62783.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	86.3	1%	4264	100%
CAR62746.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	69.6	1%	4264	80%
CAR62672.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.7	70.8	0%	4264	83%
CAR62654.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	86.3	1%	4264	71%
CAR62610.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	67.9	0%	4264	71%
CAR62609.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	69.1	0%	4264	100%
CAR62587.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	137	1%	4264	85%
CAR62568.1	immunoglobulin heavy chain variable region [Homo sapiens] >emb\|CAR62570.1\| immunoglobulin heavy chain variable region [Homo sapiens]	19.7	119	1%	4264	100%
CAR62549.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	19.7	0%	4264	38%
3DIF_A	Chain A, Crystal Structure Of Fabox117 >pdb\|3DIF\|C Chain C, Crystal Structure Of Fabox117	19.7	256	3%	4264	100%
NP_001136076.1	palmitoyl-protein thioesterase 1 isoform 2 precursor [Homo sapiens]	19.7	171	2%	4264	100%
3D2U_D	Chain D, Structure Of Ul18, A Peptide-Binding Viral Mhc Mimic, Bound To A Host Inhibitory Receptor >pdb\|3D2U\|H Chain H, Structure Of Ul18, A Peptide-Binding Viral Mhc Mimic, Bound To A Host Inhibitory Receptor	19.7	161	2%	4264	100%
ACA28840.1	T cell receptor variable beta 2 chain [Homo sapiens]	19.7	291	4%	4264	100%
2JB5_H	Chain H, Fab Fragment In Complex With Small Molecule Hapten, Crystal Form-1 >pdb\|2JB6\|B Chain B, Fab Fragment In Complex With Small Molecule Hapten, Crystal Form-2 >pdb\|2JB6\|H Chain H, Fab Fragment In Complex With Small Molecule Hapten, Crystal Form-2	19.7	190	3%	4264	83%
3BDW_B	Chain B, Human Cd94NKG2A >pdb\|3BDW\|D Chain D, Human Cd94NKG2A >pdb\|3CDG\|K Chain K, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3CDG\|F Chain F, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3CII\|H Chain H, Structure Of Nkg2aCD94 BOUND TO HLA-E >pdb\|3CII\|J Chain J, Structure Of Nkg2aCD94 BOUND TO HLA-E	19.7	106	2%	4264	83%
ABO69591.1	leukocyte-associated Ig-like receptor-2 isoform c [Homo sapiens]	19.7	172	2%	4264	100%
2NZ1_D	Chain D, Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The Cc-Chemokine Ccl2MCP-1 >pdb\|2NZ1\|E Chain E, Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The Cc-Chemokine Ccl2MCP-1 >pdb\|2NZ1\|Y Chain Y, Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The Cc-Chemokine Ccl2MCP-1	19.7	103	1%	4264	83%
2QEJ_A	Chain A, Crystal Structure Of A Staphylococcus Aureus Protein (Ssl7) In Complex With Fc Of Human Iga1 >pdb\|2QEJ\|B Chain B, Crystal Structure Of A Staphylococcus Aureus Protein (Ssl7) In Complex With Fc Of Human Iga1	19.7	211	2%	4264	100%
2NTS_P	Chain P, Crystal Structure Of Sek-Hvb5.1	19.7	187	2%	4264	83%
ABR67895.1	T cell receptor delta chain variable region [Homo sapiens]	19.7	37.3	0%	4264	85%
ABR67901.1	T cell receptor delta chain variable region [Homo sapiens]	19.7	19.7	0%	4264	61%
ABR37250.1	T-cell receptor beta chain [Homo sapiens]	19.7	52.4	0%	4264	80%
ABR37254.1	T cell receptor [Homo sapiens]	19.7	36.9	0%	4264	66%
ABR37258.1	T-cell receptor beta chain [Homo sapiens]	19.7	36.9	0%	4264	66%
2OTT_X	Chain X, Crystal Structure Of Cd5_diii >pdb\|2OTT\|Y Chain Y, Crystal Structure Of Cd5_diii	19.7	155	1%	4264	100%
2ICW_A	Chain A, Crystal Structure Of A Complete Ternary Complex Between Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule >pdb\|2ICW\|D Chain D, Crystal Structure Of A Complete Ternary Complex Between Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule	19.7	205	3%	4264	83%
2IPK_A	Chain A, Crystal Structure Of The Mhc Class Ii Molecule Hla-Dr1 In Complex With The Fluorogenic Peptide, Acpkxvkqntlklat (X3- [5-(Dimethylamino)-1,3-Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl]- L-Alanine) And The Superantigen, Sec3 Variant 3b2	19.7	186	3%	4264	83%
2JA4_A	Chain A, Crystal Structure Of Cd5 Domain Iii Reveals The Fold Of A Group B Scavenger Cysteine-Rich Receptor	19.7	139	1%	4264	100%
2OJE_A	Chain A, Mycoplasma Arthritidis-Derived Mitogen Complexed With Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE OF EDTA >pdb\|2OJE\|E Chain E, Mycoplasma Arthritidis-Derived Mitogen Complexed With Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE OF EDTA	19.7	205	3%	4264	83%
EAW74690.1	T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3, isoform CRA_b [Homo sapiens]	19.7	118	1%	4264	71%
2HFG_R	Chain R, Crystal Structure Of Hbr3 Bound To Cb3s-Fab	19.7	120	1%	4264	100%
2DYP_D	Chain D, Crystal Structure Of Lilrb2(Lir2ILT4CD85D) COMPLEXED WITH Hla-G	19.7	172	2%	4264	83%
2FSE_A	Chain A, Crystallographic Structure Of A Rheumatoid Arthritis Mhc Susceptibility Allele, Hla-Dr1 (Drb10101), Complexed With The Immunodominant Determinant Of Human Type Ii Collagen >pdb\|2FSE\|C Chain C, Crystallographic Structure Of A Rheumatoid Arthritis Mhc Susceptibility Allele, Hla-Dr1 (Drb10101), Complexed With The Immunodominant Determinant Of Human Type Ii Collagen	19.7	176	2%	4264	83%
2GW5_A	Chain A, Crystal Structure Of Lir-2 (Ilt4) At 1.8 : Differences From Lir-1 (Ilt2) In Regions Implicated In The Binding Of The Cytomegalovirus Class I Mhc Homolog Ul18	19.7	173	2%	4264	83%
ABG38436.1	immunglobulin heavy chain variable region [Homo sapiens]	19.7	87.6	1%	4264	85%
ABG38402.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	101	1%	4264	83%
ABG38400.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	68.3	0%	4264	100%
ABG38398.1	immunoglobulin light chain variable region [Homo sapiens] >gb\|ABG38405.1\| immunoglobulin light chain variable region [Homo sapiens]	19.7	68.3	0%	4264	100%
ABG38401.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	68.3	0%	4264	100%
ABG38403.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	86.8	1%	4264	80%
ABG38396.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	84.2	1%	4264	100%
ABG38397.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	68.3	0%	4264	100%
ABG38399.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	86.8	1%	4264	100%
ABG38404.1	immunoglobulin light chain variable region [Homo sapiens] >gb\|ABG38406.1\| immunoglobulin light chain variable region [Homo sapiens]	19.7	68.3	0%	4264	100%
ABG38337.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	103	1%	4264	100%
ABG38346.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	89.3	1%	4264	83%
CAJ14121.1	T-cell receptor beta chain [Homo sapiens]	19.7	39.0	0%	4264	100%
CAJ90645.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	119	2%	4264	83%
CAJ90647.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	102	1%	4264	83%
2AJ3_B	Chain B, Crystal Structure Of A Cross-Reactive Hiv-1 Neutralizing Cd4-Binding Site Antibody Fab M18 >pdb\|2AJ3\|D Chain D, Crystal Structure Of A Cross-Reactive Hiv-1 Neutralizing Cd4-Binding Site Antibody Fab M18 >pdb\|2AJ3\|F Chain F, Crystal Structure Of A Cross-Reactive Hiv-1 Neutralizing Cd4-Binding Site Antibody Fab M18	19.7	308	4%	4264	100%
2FL5_H	Chain H, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody >pdb\|2FL5\|B Chain B, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody >pdb\|2FL5\|D Chain D, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody >pdb\|2FL5\|F Chain F, Cofactor-Containing Antibodies: Crystal Structure Of The Original Yellow Antibody	19.7	243	4%	4264	83%
NP_001008883.1	T-complex protein 1 subunit gamma isoform b [Homo sapiens]	19.7	543	8%	4264	100%
NP_001008800.1	T-complex protein 1 subunit gamma isoform c [Homo sapiens]	19.7	511	7%	4264	100%
NP_001014358.1	interleukin-31 precursor [Homo sapiens]	19.7	207	2%	4264	100%
NP_001138728.1	interleukin-1 receptor-associated kinase 4 isoform b [Homo sapiens] >ref\|NP_001138729.1\| interleukin-1 receptor-associated kinase 4 isoform b [Homo sapiens] >ref\|NP_001138730.1\| interleukin-1 receptor-associated kinase 4 isoform b [Homo sapiens]	19.7	275	3%	4264	100%
NP_871622.1	ubiquitin-conjugating enzyme E2 D3 isoform 3 [Homo sapiens]	19.7	102	1%	4264	83%
NP_055602.1	putative tyrosine-protein phosphatase auxilin [Homo sapiens]	19.7	867	11%	4264	100%
NP_871621.1	ubiquitin-conjugating enzyme E2 D3 isoform 2 [Homo sapiens]	19.7	118	1%	4264	83%
NP_775656.1	high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A isoform 2 [Homo sapiens]	19.7	808	10%	4264	100%
CAD10379.1	killer cell immunoglobulin receptor [Homo sapiens]	19.7	431	6%	4264	100%
NP_002279.2	leukocyte-associated immunoglobulin-like receptor 2 isoform a [Homo sapiens]	19.7	222	2%	4264	100%
AAB35629.1	mu opioid receptor [human, CEM x174 cells, Peptide Partial, 146 aa]	19.7	231	4%	4264	83%
NP_001819.2	eosinophil lysophospholipase [Homo sapiens] >gb\|ACR09636.1\| galectin-10A precursor [Homo sapiens]	19.7	52.4	0%	4264	85%
NP_001139277.1	immunity-related GTPase family M protein [Homo sapiens] >sp\|A1A4Y4.2\|IRGM_HUMAN RecName: Full=Immunity-related GTPase family M protein; AltName: Full=Immunity-related GTPase family M protein 1; AltName: Full=Interferon-inducible protein 1; AltName: Full=LPS-stimulated RAW 264.7 macrophage protein 47 homolog; Short=LRG-47	19.7	108	1%	4264	85%
AAD47070.1	anti-HLA-A2/A28 immunoglobulin light chain variable region [Homo sapiens]	19.7	158	2%	4264	100%
AAA36079.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	19.7	160	1%	4264	83%
NP_067154.1	leukocyte-associated immunoglobulin-like receptor 2 isoform b [Homo sapiens]	19.7	154	1%	4264	100%
AAD47067.1	anti-HLA-A2/A28 immunoglobulin heavy chain variable region [Homo sapiens]	19.7	66.6	1%	4264	100%
AAC68897.1	envelope protein RIC-5 [Homo sapiens]	19.7	158	1%	4264	100%
AAL65230.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	109	1%	4264	80%
AAA36076.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	19.7	188	2%	4264	80%
AAC61602.1	immunoglobulin variable region used by the ITC33 lambda light chain (subgroup V lambda II) (anti-cytomeglovirus glycoprotein B [Homo sapiens]	19.7	86.3	1%	4264	80%
AAL57835.1	anti-hepatitis B surface antigen immunoglobulin heavy chain variable region [Homo sapiens]	19.7	172	2%	4264	100%
AAC43028.1	anti-mucin1 heavy chain variable region [Homo sapiens]	19.7	85.5	1%	4264	66%
NP_067074.1	calpain-10 isoform h [Homo sapiens]	19.7	237	3%	4264	100%
ABG38419.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	154	2%	4264	83%
AAY57173.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	120	1%	4264	100%
AAY57179.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	120	1%	4264	100%
AAY57182.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	70.4	0%	4264	100%
AAY57093.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	83.4	1%	4264	100%
AAY33472.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	135	1%	4264	83%
AAY33408.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	137	2%	4264	83%
AAY33412.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	87.6	0%	4264	100%
AAY33438.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	121	1%	4264	83%
AAY33433.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	90.1	1%	4264	100%
AAY33400.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	91.8	1%	4264	100%
AAY33432.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	134	1%	4264	83%
AAY33477.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	37.8	0%	4264	100%
AAY33406.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	134	1%	4264	83%
AAY33194.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.7	52.4	0%	4264	100%
AAY33304.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.7	52.4	0%	4264	100%
AAY33211.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.7	136	2%	4264	85%
AAY33366.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	54.5	0%	4264	100%
AAY33362.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	105	1%	4264	100%
AAY33365.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	89.7	1%	4264	83%
AAY33383.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	87.2	1%	4264	100%
AAY33389.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	126	1%	4264	100%
AAY33390.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.7	104	1%	4264	100%
AAY33320.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.7	85.5	1%	4264	80%
AAY16612.1	immunoglobulin kappa light chain [Homo sapiens]	19.7	122	1%	4264	100%
AAY16630.1	immunoglobulin kappa light chain [Homo sapiens]	19.7	122	1%	4264	100%
NP_062550.2	cytotoxic and regulatory T-cell molecule precursor [Homo sapiens] >sp\|O95727.2\|CRTAM_HUMAN RecName: Full=Cytotoxic and regulatory T-cell molecule; AltName: Full=Class-I MHC-restricted T-cell-associated molecule; Flags: Precursor	19.7	401	4%	4264	100%
NP_982297.1	placental protein 13-like isoform 2 [Homo sapiens]	19.7	143	2%	4264	83%
AAL04535.1	anti-pneumococcal capsular polysaccharide immunoglobulin kappa light chain [Homo sapiens]	19.7	84.6	1%	4264	80%
AAL04541.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	19.7	106	1%	4264	100%
NP_001020271.1	Golli-MBP isoform 2 [Homo sapiens] >gb\|AAA72010.1\| unnamed protein product [Homo sapiens]	19.7	170	2%	4264	100%
AAA72009.1	unnamed protein product [Homo sapiens]	19.7	54.9	0%	4264	100%
NP_765978.1	nuclear factor of activated T-cells, cytoplasmic 1 isoform A [Homo sapiens]	19.7	531	8%	4264	100%
AAL04538.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	19.7	71.7	0%	4264	100%
AAL04537.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	19.7	52.0	0%	4264	80%
AAL04525.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	19.7	51.1	0%	4264	80%
AAL04527.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	19.7	87.2	1%	4264	83%
CAJ00282.1	T-cell receptor alpha chain [Homo sapiens]	19.7	37.8	0%	4264	85%
1ZGL_P	Chain P, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|R Chain R, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|T Chain T, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|V Chain V, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a	19.7	187	2%	4264	83%
1W2R_A	Chain A, Solution Structure Of Cr2 Scr 1-2 By X-Ray Scattering >pdb\|1W2S\|B Chain B, Solution Structure Of Cr2 Scr 1-2 In Its Complex With C3d By X-Ray Scattering	19.7	86.8	1%	4264	80%
1ZLS_H	Chain H, Fab 2g12 + Man4 >pdb\|1ZLU\|H Chain H, Fab 2g12 + Man5 >pdb\|1ZLU\|M Chain M, Fab 2g12 + Man5 >pdb\|1ZLV\|H Chain H, Fab 2g12 + Man7 >pdb\|1ZLV\|M Chain M, Fab 2g12 + Man7 >pdb\|1ZLW\|H Chain H, Fab 2g12 + Man8 >pdb\|1ZLW\|M Chain M, Fab 2g12 + Man8 >pdb\|2OQJ\|B Chain B, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1 >pdb\|2OQJ\|E Chain E, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1 >pdb\|2OQJ\|H Chain H, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1 >pdb\|2OQJ\|K Chain K, Crystal Structure Analysis Of Fab 2g12 In Complex With Peptide 2g12.1	19.7	209	3%	4264	83%
1U6A_H	Chain H, Crystal Structure Of The Broadly Neutralizing Anti-Hiv Fab F105	19.7	191	3%	4264	83%
2A0Z_A	Chain A, The Molecular Structure Of Toll-Like Receptor 3 Ligand Binding Domain	19.7	679	7%	4264	100%
1ZIW_A	Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure	19.7	663	7%	4264	100%
1YMM_A	Chain A, TcrHLA-Dr2bMBP-Peptide Complex	19.7	188	3%	4264	83%
3CFJ_L	Chain L, Crystal Structure Of Catalytic Elimination Antibody 34e4, Orthorhombic Crystal Form >pdb\|3CFJ\|A Chain A, Crystal Structure Of Catalytic Elimination Antibody 34e4, Orthorhombic Crystal Form >pdb\|3CFJ\|C Chain C, Crystal Structure Of Catalytic Elimination Antibody 34e4, Orthorhombic Crystal Form >pdb\|3CFJ\|E Chain E, Crystal Structure Of Catalytic Elimination Antibody 34e4, Orthorhombic Crystal Form >pdb\|3CFK\|L Chain L, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|A Chain A, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|C Chain C, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|E Chain E, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|G Chain G, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|J Chain J, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|M Chain M, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form >pdb\|3CFK\|O Chain O, Crystal Structure Of Catalytic Elimination Antibody 34e4, Triclinic Crystal Form	19.7	281	4%	4264	100%
NP_005989.3	T-complex protein 1 subunit gamma isoform a [Homo sapiens]	19.7	543	8%	4264	100%
1UGN_A	Chain A, Crystal Structure Of Lir1.02, One Of The Alleles Of Lir1	19.7	160	2%	4264	100%
1T5X_A	Chain A, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) And The Superantigen Sec3-3b2	19.7	186	3%	4264	83%
1UJ3_B	Chain B, Crystal Structure Of A Humanized Fab Fragment Of Anti- Tissue-Factor Antibody In Complex With Tissue Factor	19.7	209	4%	4264	100%
CAG29710.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62729.1\| immunoglobulin heavy chain variable region [Homo sapiens]	19.7	51.5	0%	4264	80%
1R5I_A	Chain A, Crystal Structure Of The Mam-Mhc Complex >pdb\|1R5I\|E Chain E, Crystal Structure Of The Mam-Mhc Complex	19.7	205	3%	4264	83%
CAE54367.1	immunoglobulin heavy chain [Homo sapiens]	19.7	106	1%	4264	100%
CAE54368.1	immunoglobulin heavy chain [Homo sapiens]	19.7	106	1%	4264	100%
1RZG_A	Chain A, Crystal Structure Of Human Anti-Hiv-1 Gp120 Reactive Antibody 412d >pdb\|1RZG\|C Chain C, Crystal Structure Of Human Anti-Hiv-1 Gp120 Reactive Antibody 412d	19.7	188	3%	4264	83%
1RZG_B	Chain B, Crystal Structure Of Human Anti-Hiv-1 Gp120 Reactive Antibody 412d >pdb\|1RZG\|D Chain D, Crystal Structure Of Human Anti-Hiv-1 Gp120 Reactive Antibody 412d	19.7	225	3%	4264	100%
1RZ7_L	Chain L, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 48d	19.7	254	3%	4264	100%
1OLZ_A	Chain A, The Ligand-Binding Face Of The Semaphorins Revealed By The High Resolution Crystal Structure Of Sema4d >pdb\|1OLZ\|B Chain B, The Ligand-Binding Face Of The Semaphorins Revealed By The High Resolution Crystal Structure Of Sema4d	19.7	443	5%	4264	100%
1OM3_H	Chain H, Fab 2g12 Unliganded >pdb\|1OM3\|K Chain K, Fab 2g12 Unliganded >pdb\|1OP3\|H Chain H, Crystal Structure Of Fab 2g12 Bound To Man1->2man >pdb\|1OP3\|M Chain M, Crystal Structure Of Fab 2g12 Bound To Man1->2man >pdb\|1OP5\|H Chain H, Crystal Structure Of Fab 2g12 Bound To Man9glcnac2 >pdb\|1OP5\|M Chain M, Crystal Structure Of Fab 2g12 Bound To Man9glcnac2	19.7	209	3%	4264	83%
1OW0_A	Chain A, Crystal Structure Of Human Fcari Bound To Iga1-Fc >pdb\|1OW0\|B Chain B, Crystal Structure Of Human Fcari Bound To Iga1-Fc	19.7	211	2%	4264	100%
1MPU_A	Chain A, Crystal Structure Of The Free Human Nkg2d Immunoreceptor	19.7	155	1%	4264	100%
CAD88675.1	immunoglobulin heavy chain [Homo sapiens]	19.7	52.4	0%	4264	80%
CAD88644.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.7	66.6	0%	4264	83%
CAD88693.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.7	51.1	0%	4264	80%
CAD88689.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.7	136	2%	4264	83%
CAD88697.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.7	54.9	0%	4264	80%
CAD88765.1	immunoglobulin heavy chain [Homo sapiens]	19.7	89.3	1%	4264	83%
CAD88764.1	immunoglobulin heavy chain [Homo sapiens]	19.7	85.9	1%	4264	100%
CAD88664.1	immunoglobulin heavy chain [Homo sapiens]	19.7	53.2	0%	4264	80%
CAD88720.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.7	102	2%	4264	80%
CAB46454.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	116	1%	4264	83%
O75398.1	RecName: Full=Deformed epidermal autoregulatory factor 1 homolog; AltName: Full=Nuclear DEAF-1-related transcriptional regulator; Short=NUDR; AltName: Full=Suppressin; AltName: Full=Zinc finger MYND domain-containing protein 5	19.7	364	6%	4264	100%
CAC03908.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
1HYR_C	Chain C, Crystal Structure Of Human Mica In Complex With Natural Killer Cell Receptor Nkg2d	19.7	248	3%	4264	100%
NP_001627.2	ADP/ATP translocase 3 [Homo sapiens]	19.7	189	2%	4264	100%
1FE8_A	Chain A, Crystal Structure Of The Von Willebrand Factor A3 Domain In Complex With A Fab Fragment Of Igg Ru5 That Inhibits Collagen Binding >pdb\|1FE8\|B Chain B, Crystal Structure Of The Von Willebrand Factor A3 Domain In Complex With A Fab Fragment Of Igg Ru5 That Inhibits Collagen Binding >pdb\|1FE8\|C Chain C, Crystal Structure Of The Von Willebrand Factor A3 Domain In Complex With A Fab Fragment Of Igg Ru5 That Inhibits Collagen Binding	19.7	209	3%	4264	83%
1QFW_B	Chain B, Ternary Complex Of Human Chorionic Gonadotropin With Fv Anti Alpha Subunit And Fv Anti Beta Subunit	19.7	136	1%	4264	100%
CAC03813.1	T-cell receptor beta chain [Homo sapiens]	19.7	84.6	1%	4264	83%
NP_003331.1	ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >ref\|NP_871615.1\| ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >ref\|NP_871616.1\| ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >ref\|NP_871617.1\| ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >ref\|NP_871618.1\| ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >ref\|NP_871619.1\| ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >ref\|NP_871620.1\| ubiquitin-conjugating enzyme E2 D3 isoform 1 [Homo sapiens] >sp\|P61077.1\|UB2D3_HUMAN RecName: Full=Ubiquitin-conjugating enzyme E2 D3; AltName: Full=Ubiquitin-protein ligase D3; AltName: Full=Ubiquitin carrier protein D3; AltName: Full=Ubiquitin-conjugating enzyme E2-17 kDa 3; AltName: Full=Ubiquitin-conjugating enzyme E2(17)KB 3 >gb\|AAA91461.1\| UbcH5C [Homo sapiens]	19.7	118	1%	4264	83%
1B3J_A	Chain A, Structure Of The Mhc Class I Homolog Mic-A, A Gammadelta T Cell Ligand	19.7	248	3%	4264	100%
CAB59375.1	T cell receptor beta chain variable region [Homo sapiens]	19.7	102	1%	4264	83%
Q9NP55.1	RecName: Full=Protein Plunc; AltName: Full=Palate lung and nasal epithelium clone protein; AltName: Full=Lung-specific protein X; AltName: Full=Nasopharyngeal carcinoma-related protein; AltName: Full=Tracheal epithelium-enriched protein; AltName: Full=Secretory protein in upper respiratory tracts; AltName: Full=Von Ebner protein Hl; Flags: Precursor	19.7	218	3%	4264	100%
CAB59409.1	T cell receptor beta chain variable region [Homo sapiens]	19.7	86.8	1%	4264	83%
P13500.1	RecName: Full=C-C motif chemokine 2; AltName: Full=Small-inducible cytokine A2; AltName: Full=Monocyte chemoattractant protein 1; AltName: Full=Monocyte chemotactic protein 1; Short=MCP-1; AltName: Full=Monocyte chemotactic and activating factor; Short=MCAF; AltName: Full=Monocyte secretory protein JE; AltName: Full=HC11; Flags: Precursor	19.7	86.3	1%	4264	83%
ACR09637.1	galectin-10A precursor [Homo sapiens]	19.7	52.4	0%	4264	85%
NP_001740.1	calpain small subunit 1 [Homo sapiens] >ref\|NP_001003962.1\| calpain small subunit 1 [Homo sapiens]	19.7	334	4%	4264	100%
CAC03800.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
NP_525126.2	C-type lectin domain family 4 member D [Homo sapiens]	19.7	298	4%	4264	100%
NP_036224.1	inducible T-cell costimulator precursor [Homo sapiens] >emb\|CAC06612.1\| inducible T-cell co-stimulator [Homo sapiens]	19.7	224	2%	4264	100%
CAC28007.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.7	152	2%	4264	83%
NP_057207.2	interleukin-1 receptor-associated kinase 4 isoform a [Homo sapiens] >ref\|NP_001107654.1\| interleukin-1 receptor-associated kinase 4 isoform a [Homo sapiens]	19.7	328	4%	4264	100%
CAC03780.1	T-cell receptor beta chain [Homo sapiens]	19.7	119	1%	4264	83%
CAB51296.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.7	197	3%	4264	100%
CAB51312.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.7	137	2%	4264	83%
1F6A_B	Chain B, Structure Of The Human Ige-Fc Bound To Its High Affinity Receptor Fc(Epsilon)ri(Alpha) >pdb\|1F6A\|D Chain D, Structure Of The Human Ige-Fc Bound To Its High Affinity Receptor Fc(Epsilon)ri(Alpha) >pdb\|1FP5\|A Chain A, Crystal Structure Analysis Of The Human Ige-Fc Cepsilon3- Cepsilon4 Fragment.	19.7	139	1%	4264	100%
CAC03781.1	T-cell receptor beta chain [Homo sapiens]	19.7	37.3	0%	4264	85%
CAC03832.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
CAC03821.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
CAB59418.1	T cell receptor beta chain variable region [Homo sapiens]	19.7	86.8	1%	4264	83%
1KCG_C	Chain C, Nkg2d In Complex With Ulbp3	19.7	256	3%	4264	100%
1HXY_A	Chain A, Crystal Structure Of Staphylococcal Enterotoxin H In Complex With Human Mhc Class Ii >pdb\|1LO5\|A Chain A, Crystal Structure Of The D227a Variant Of Staphylococcal Enterotoxin A In Complex With Human Mhc Class Ii >pdb\|1JWM\|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1(Ha Peptide 306-318) With The Superantigen Sec3 >pdb\|1JWS\|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1 (Ha Peptide 306-318) With The Superantigen Sec3 Variant 3b1 >pdb\|1JWU\|A Chain A, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1 (Ha Peptide 306-318) With The Superantigen Sec3 Variant 3b2 >pdb\|1PYW\|A Chain A, Human Class Ii Mhc Protein Hla-Dr1 Bound To A Designed Peptide Related To Influenza Virus Hemagglutinin, Fvkqna(Maa)al, In Complex With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2) >pdb\|2G9H\|A Chain A, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In Complex With A Human Mhc Class Ii Molecule >pdb\|2IAM\|A Chain A, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|A Chain A, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|F Chain F, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|K Chain K, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|P Chain P, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2Q6W\|A Chain A, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound Platelet Integrin Peptide Associated With Fetal And Neonatal Alloimmune Thrombocytopenia >pdb\|2Q6W\|D Chain D, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound Platelet Integrin Peptide Associated With Fetal And Neonatal Alloimmune Thrombocytopenia	19.7	186	3%	4264	83%
NP_057227.2	NSFL1 cofactor p47 isoform a [Homo sapiens]	19.7	379	4%	4264	100%
CAC03788.1	T-cell receptor beta chain [Homo sapiens]	19.7	88.5	1%	4264	100%
CAB59400.1	T cell receptor beta chain variable region [Homo sapiens]	19.7	86.8	1%	4264	83%
NP_002493.3	nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens] >ref\|NP_001070961.1\| nuclear factor NF-kappa-B p100 subunit isoform b [Homo sapiens]	19.7	788	12%	4264	100%
NP_002596.1	high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A isoform 1 [Homo sapiens]	19.7	824	11%	4264	100%
NP_001919.2	complement factor D preproprotein [Homo sapiens]	19.7	153	2%	4264	100%
CAC28000.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.7	68.3	1%	4264	66%
1BWW_A	Chain A, Bence-Jones Immunoglobulin Rei Variable Portion, T39k Mutant >pdb\|1BWW\|B Chain B, Bence-Jones Immunoglobulin Rei Variable Portion, T39k Mutant	19.7	157	3%	4264	100%
CAC03764.1	T-cell receptor beta chain [Homo sapiens]	19.7	110	1%	4264	100%
1NKR_A	Chain A, Inhibitory Receptor (P58-Cl42) For Human Natural Killer Cells	19.7	185	1%	4264	100%
CAB46472.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	137	1%	4264	83%
CAC28017.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.7	68.3	1%	4264	66%
NP_006601.2	mannan-binding lectin serine protease 2 isoform 1 precursor [Homo sapiens]	19.7	478	5%	4264	100%
CAC48317.1	T-cell receptor beta chain [Homo sapiens]	19.7	72.1	0%	4264	100%
CAC03883.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
NP_004542.1	NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial precursor [Homo sapiens]	19.7	228	3%	4264	100%
NP_001020272.1	Golli-MBP isoform 1 [Homo sapiens] >sp\|P02686.3\|MBP_HUMAN RecName: Full=Myelin basic protein; Short=MBP; AltName: Full=Myelin A1 protein; AltName: Full=Myelin membrane encephalitogenic protein >gb\|AAA72011.1\| unnamed protein product [Homo sapiens]	19.7	219	3%	4264	100%
CAC03932.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	66%
1KLU_A	Chain A, Crystal Structure Of Hla-Dr1TPI(23-37) Complexed With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2)	19.7	186	3%	4264	83%
1DL7_L	Chain L, The Structural Basis Of Repertoire Shift In An Immune Response To Phosphocholine	19.7	113	1%	4264	80%
1FH5_L	Chain L, Crystal Structure Of The Fab Fragment Of The Monoclonal Antibody Mak33	19.7	271	3%	4264	100%
CAC03808.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
Q95365.1	RecName: Full=HLA class I histocompatibility antigen, B-38 alpha chain; AltName: Full=MHC class I antigen B*38; AltName: Full=Bw-4; Flags: Precursor	19.7	233	3%	4264	100%
NP_061327.2	NSFL1 cofactor p47 isoform b [Homo sapiens]	19.7	363	4%	4264	100%
1G0X_A	Chain A, Crystal Structure Of The Ligand Binding Domain Of Lir-1 (Ilt2) >pdb\|1P7Q\|D Chain D, Crystal Structure Of Hla-A2 Bound To Lir-1, A Host And Viral Mhc Receptor >pdb\|1UFU\|A Chain A, Crystal Structure Of Ligand Binding Domain Of Immunoglobulin-Like Transcript 2 (Ilt2; Lir-1)	19.7	161	2%	4264	100%
1EK3_A	Chain A, Kappa-4 Immunoglobulin Vl, Rec >pdb\|1EK3\|B Chain B, Kappa-4 Immunoglobulin Vl, Rec	19.7	51.1	1%	4264	71%
CAB59380.1	T cell receptor beta chain variable region [Homo sapiens]	19.7	86.8	1%	4264	83%
AAB86580.1	1C7 precursor [Homo sapiens]	19.7	187	2%	4264	100%
CAB48532.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	121	1%	4264	83%
NP_006854.1	leukocyte immunoglobulin-like receptor subfamily A member 1 precursor [Homo sapiens]	19.7	567	8%	4264	100%
1D5M_A	Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptide And Seb >pdb\|1D5X\|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Dipeptide Mimetic And Seb >pdb\|1D5Z\|A Chain A, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptidomimetic And Seb >pdb\|1D6E\|A Chain A, Crystal Structure Of Hla-Dr4 Complex With Peptidomimetic And Seb >pdb\|1FV1\|A Chain A, Structural Basis For The Binding Of An Immunodominant Peptide From Myelin Basic Protein In Different Registers By Two Hla-Dr2 Alleles >pdb\|1FV1\|D Chain D, Structural Basis For The Binding Of An Immunodominant Peptide From Myelin Basic Protein In Different Registers By Two Hla-Dr2 Alleles >pdb\|1FYT\|A Chain A, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr1 >pdb\|1HQR\|A Chain A, Crystal Structure Of A Superantigen Bound To The High- Affinity, Zinc-Dependent Site On Mhc Class Ii >pdb\|1J8H\|A Chain A, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr4 >pdb\|1ZGL\|A Chain A, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|D Chain D, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|G Chain G, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|J Chain J, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a	19.7	186	3%	4264	83%
NP_001035534.1	PHD finger protein 11 isoform b [Homo sapiens]	19.7	118	1%	4264	83%
CAC03916.1	T-cell receptor beta chain [Homo sapiens]	19.7	102	1%	4264	83%
NP_000582.1	monocyte differentiation antigen CD14 precursor [Homo sapiens] >ref\|NP_001035110.1\| monocyte differentiation antigen CD14 precursor [Homo sapiens] >ref\|NP_001167575.1\| monocyte differentiation antigen CD14 precursor [Homo sapiens] >ref\|NP_001167576.1\| monocyte differentiation antigen CD14 precursor [Homo sapiens] >sp\|P08571.2\|CD14_HUMAN RecName: Full=Monocyte differentiation antigen CD14; AltName: Full=Myeloid cell-specific leucine-rich glycoprotein; AltName: CD_antigen=CD14; Contains: RecName: Full=Monocyte differentiation antigen CD14, urinary form; Contains: RecName: Full=Monocyte differentiation antigen CD14, membrane-bound form; Flags: Precursor	19.7	301	4%	4264	100%
CAC48307.1	T-cell receptor beta chain [Homo sapiens]	19.7	70.0	1%	4264	58%
P28062.2	RecName: Full=Proteasome subunit beta type-8; AltName: Full=Proteasome subunit beta-5i; AltName: Full=Proteasome component C13; AltName: Full=Macropain subunit C13; AltName: Full=Multicatalytic endopeptidase complex subunit C13; AltName: Full=Low molecular mass protein 7; AltName: Full=Really interesting new gene 10 protein; Flags: Precursor	19.7	119	1%	4264	100%
CAB43019.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.7	172	2%	4264	100%
CAC03864.1	T-cell receptor beta chain [Homo sapiens]	19.7	68.7	0%	4264	100%
1KLG_A	Chain A, Crystal Structure Of Hla-Dr1TPI(23-37, Thr28-->ile Mutant) Complexed With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2)	19.7	186	3%	4264	83%
NP_061194.2	interleukin-20 precursor [Homo sapiens]	19.7	217	3%	4264	100%
1HYR_B	Chain B, Crystal Structure Of Human Mica In Complex With Natural Killer Cell Receptor Nkg2d >pdb\|1HYR\|A Chain A, Crystal Structure Of Human Mica In Complex With Natural Killer Cell Receptor Nkg2d	19.7	155	1%	4264	100%
CAB51291.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.7	90.1	1%	4264	100%
NP_742152.1	interleukin-29 precursor [Homo sapiens]	19.7	176	2%	4264	100%
1BX2_A	Chain A, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed With A Peptide From Human Myelin Basic Protein >pdb\|1BX2\|D Chain D, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed With A Peptide From Human Myelin Basic Protein >pdb\|1T5W\|A Chain A, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) >pdb\|1T5W\|D Chain D, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr)	19.7	186	3%	4264	83%
CAB46460.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	71.7	0%	4264	100%
CAC03857.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
Q9H6Q3.3	RecName: Full=Src-like-adapter 2; AltName: Full=Src-like adapter protein 2; Short=SLAP-2; AltName: Full=Modulator of antigen receptor signaling; Short=MARS	19.7	485	5%	4264	100%
CAB51306.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.7	67.9	0%	4264	80%
1KG0_A	Chain A, Structure Of The Epstein-Barr Virus Gp42 Protein Bound To The Mhc Class Ii Receptor Hla-Dr1 >pdb\|1SJE\|A Chain A, Hla-Dr1 Complexed With A 16 Residue Hiv Capsid Peptide Bound In A Hairpin Conformation >pdb\|1SJH\|A Chain A, Hla-Dr1 Complexed With A 13 Residue Hiv Capsid Peptide	19.7	186	3%	4264	83%
NP_005353.1	melanoma-associated antigen 3 [Homo sapiens]	19.7	292	4%	4264	100%
NP_061984.2	HLA class II histocompatibility antigen, DR alpha chain precursor [Homo sapiens]	19.7	308	4%	4264	83%
NP_001035533.1	PHD finger protein 11 isoform a [Homo sapiens]	19.7	152	1%	4264	83%
CAC03929.1	T-cell receptor beta chain [Homo sapiens]	19.7	70.0	1%	4264	58%
1ML0_D	Chain D, Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The P8a Variant Of Cc- Chemokine Mcp-1	19.7	103	1%	4264	83%
NP_036444.1	killer cell immunoglobulin-like receptor 2DS2 precursor [Homo sapiens] >emb\|CAL64379.1\| killer-cell Ig-like receptor [Homo sapiens]	19.7	448	5%	4264	100%
Q9UIB8.1	RecName: Full=SLAM family member 5; AltName: Full=Signaling lymphocytic activation molecule 5; AltName: Full=Leukocyte differentiation antigen CD84; AltName: Full=Cell surface antigen MAX.3; AltName: Full=Hly9-beta; AltName: CD_antigen=CD84; Flags: Precursor	19.7	489	7%	4264	100%
NP_036446.3	killer cell immunoglobulin-like receptor 2DS4 [Homo sapiens]	19.7	432	6%	4264	100%
AAB86578.1	1C7 precursor [Homo sapiens]	19.7	188	2%	4264	100%
CAC03814.1	T-cell receptor beta chain [Homo sapiens]	19.7	70.8	0%	4264	83%
1DON_A	Chain A, Solution Structure Of The Monocyte Chemoattractant Protein- 1 Dimer Using Heteronuclear, Nmr, 20 Structures >pdb\|1DON\|B Chain B, Solution Structure Of The Monocyte Chemoattractant Protein- 1 Dimer Using Heteronuclear, Nmr, 20 Structures >pdb\|1DOM\|A Chain A, Solution Structure Of The Monocyte Chemoattractant Protein- 1 Dimer Using Heteronuclear, Nmr, Minimized Average Structure >pdb\|1DOM\|B Chain B, Solution Structure Of The Monocyte Chemoattractant Protein- 1 Dimer Using Heteronuclear, Nmr, Minimized Average Structure >pdb\|2BDN\|A Chain A, Crystal Structure Of Human Mcp-1 Bound To A Blocking Antibody, 11k2	19.7	86.3	1%	4264	83%
AAB86579.1	1C7 precursor [Homo sapiens]	19.7	205	3%	4264	100%
CAC03954.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
CAC03772.1	T-cell receptor beta chain [Homo sapiens]	19.7	36.1	0%	4264	100%
1A02_F	Chain F, Structure Of The Dna Binding Domains Of Nfat, Fos And Jun Bound To Dna	19.7	19.7	0%	4264	48%
2OXM_A	Chain A, Crystal Structure Of A Ung2MODIFIED DNA COMPLEX THAT Represent A Stabilized Short-Lived Extrahelical State In Ezymatic Dna Base Flipping >pdb\|2OYT\|A Chain A, Crystal Structure Of Ung2DNA(TM)	19.7	154	2%	4264	83%
CAC48308.1	T-cell receptor beta chain [Homo sapiens]	19.7	54.5	0%	4264	83%
P02763.1	RecName: Full=Alpha-1-acid glycoprotein 1; Short=AGP 1; AltName: Full=Orosomucoid-1; Short=OMD 1; Flags: Precursor	19.7	167	1%	4264	100%
NP_963837.1	galectin-8 isoform b [Homo sapiens] >ref\|NP_963838.1\| galectin-8 isoform b [Homo sapiens]	19.7	180	3%	4264	100%
CAC03967.1	T-cell receptor beta chain [Homo sapiens]	19.7	105	1%	4264	100%
NP_002801.1	26S proteasome non-ATPase regulatory subunit 4 [Homo sapiens]	19.7	416	5%	4264	100%
CAB46452.1	immunoglobulin light chain variable region [Homo sapiens]	19.7	118	2%	4264	100%
1NYS_B	Chain B, Crystal Structure Of Activin A Bound To The Ecd Of Actriib P41 >pdb\|1NYS\|D Chain D, Crystal Structure Of Activin A Bound To The Ecd Of Actriib P41 >pdb\|1NYU\|B Chain B, Crystal Structure Of Activin A Bound To The Ecd Of Actriib >pdb\|1NYU\|D Chain D, Crystal Structure Of Activin A Bound To The Ecd Of Actriib	19.7	155	2%	4264	83%
1JV5_A	Chain A, Anti-Blood Group A Fv	19.7	103	1%	4264	83%
P19652.2	RecName: Full=Alpha-1-acid glycoprotein 2; Short=AGP 2; AltName: Full=Orosomucoid-2; Short=OMD 2; Flags: Precursor	19.7	138	1%	4264	100%
NP_059121.1	sperm surface protein Sp17 [Homo sapiens]	19.7	158	2%	4264	100%
Q5D1E8.1	RecName: Full=Ribonuclease ZC3H12A; AltName: Full=Zinc finger CCCH domain-containing protein 12A; AltName: Full=MCP-induced protein 1	19.7	469	6%	4264	100%
CAC03944.1	T-cell receptor beta chain [Homo sapiens]	19.7	86.8	1%	4264	83%
NP_001070962.1	nuclear factor NF-kappa-B p100 subunit isoform a [Homo sapiens] >sp\|Q00653.4\|NFKB2_HUMAN RecName: Full=Nuclear factor NF-kappa-B p100 subunit; AltName: Full=Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2; AltName: Full=DNA-binding factor KBF2; AltName: Full=H2TF1; AltName: Full=Lymphocyte translocation chromosome 10 protein; AltName: Full=Oncogene Lyt-10; Short=Lyt10; Contains: RecName: Full=Nuclear factor NF-kappa-B p52 subunit	19.7	770	12%	4264	100%
NP_653202.1	CKLF-like MARVEL transmembrane domain-containing protein 3 [Homo sapiens] >ref\|NP_853531.1\| CKLF-like MARVEL transmembrane domain-containing protein 3 [Homo sapiens] >ref\|NP_853532.1\| CKLF-like MARVEL transmembrane domain-containing protein 3 [Homo sapiens] >ref\|NP_001041716.1\| CKLF-like MARVEL transmembrane domain-containing protein 3 [Homo sapiens]	19.7	224	3%	4264	100%
CAC28905.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	19.7	91.4	1%	4264	83%
Q9ULZ1.1	RecName: Full=Apelin; AltName: Full=APJ endogenous ligand; Contains: RecName: Full=Apelin-36; Contains: RecName: Full=Apelin-31; Contains: RecName: Full=Apelin-28; Contains: RecName: Full=Apelin-13; Flags: Precursor	19.7	167	2%	4264	83%
NP_000221.1	leptin precursor [Homo sapiens]	19.7	221	3%	4264	100%
3MLY_H	Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With A Ur29 V3 Peptide >pdb\|3MLY\|I Chain I, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With A Ur29 V3 Peptide >pdb\|3MLZ\|H Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With A Vi191 V3 Peptide	19.3	151	2%	5722	83%
3MLX_H	Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With An Mn V3 Peptide >pdb\|3MLX\|I Chain I, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex With An Mn V3 Peptide	19.3	151	2%	5722	83%
3MLR_H	Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ny5 V3 Peptide >pdb\|3MLS\|H Chain H, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLS\|I Chain I, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLS\|J Chain J, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLS\|K Chain K, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex With A Hiv- 1 Gp120 V3 Mimotope >pdb\|3MLT\|H Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLT\|B Chain B, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLT\|E Chain E, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLT\|I Chain I, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Ug1033 V3 Peptide >pdb\|3MLU\|H Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With A Zam18 V3 Peptide >pdb\|3MLV\|H Chain H, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With An Nof V3 Peptide >pdb\|3MLV\|N Chain N, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex With An Nof V3 Peptide	19.3	134	2%	5722	83%
3I6L_D	Chain D, Newly Identified Epitope N1 Derived From Sars-Cov N Protein Complexed With Hla-A2402	19.3	135	2%	5722	83%
3GO1_H	Chain H, Crystal Structure Of Anti-Hiv-1 Fab 268-D In Complex With V3 Peptide Mn	19.3	201	3%	5722	83%
3MUG_B	Chain B, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|D Chain D, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|F Chain F, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|H Chain H, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|J Chain J, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody >pdb\|3MUG\|L Chain L, Crystal Structure Of Human Fab Pg16, A Broadly Reactive And Hiv-1 Neutralizing Antibody	19.3	186	3%	5722	83%
3KR3_H	Chain H, Crystal Structure Of Igf-Ii Antibody Complex	19.3	167	2%	5722	100%
3LRS_H	Chain H, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3LRS\|A Chain A, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3LRS\|C Chain C, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3LRS\|E Chain E, Structure Of Pg16, An Antibody With Broad And Potent Neutral Hiv-1 >pdb\|3MME\|H Chain H, Structure And Functional Dissection Of Pg16, An Antibody Wit And Potent Neutralization Of Hiv-1 >pdb\|3MME\|A Chain A, Structure And Functional Dissection Of Pg16, An Antibody Wit And Potent Neutralization Of Hiv-1 >pdb\|3MME\|C Chain C, Structure And Functional Dissection Of Pg16, An Antibody Wit And Potent Neutralization Of Hiv-1	19.3	186	3%	5722	83%
3HMW_H	Chain H, Crystal Structure Of Ustekinumab Fab	19.3	234	4%	5722	85%
3KDM_H	Chain H, Crystal Structure Of Human Anti-Steroid Fab 5f2 In Complex W Testosterone >pdb\|3KDM\|B Chain B, Crystal Structure Of Human Anti-Steroid Fab 5f2 In Complex W Testosterone	19.3	186	2%	5722	100%
NP_001171569.1	B-lymphocyte antigen CD19 isoform 1 precursor [Homo sapiens]	19.3	407	4%	5722	100%
3LQZ_A	Chain A, Crystal Structure Of Hla-Dp2	19.3	87.2	1%	5722	100%
3L5Y_H	Chain H, Crystal Structure Of The Complex Between Il-13 And M1295 Fab	19.3	217	3%	5722	100%
3L5X_H	Chain H, Crystal Structure Of The Complex Between Il-13 And H2l6 Fab	19.3	216	3%	5722	100%
3L95_X	Chain X, Crystal Structure Of The Human Notch1 Negative Regulatory Re Bound To The Fab Fragment Of An Antagonist Antibody >pdb\|3L95\|Y Chain Y, Crystal Structure Of The Human Notch1 Negative Regulatory Re Bound To The Fab Fragment Of An Antagonist Antibody	19.3	220	2%	5722	85%
NP_001166039.1	myeloid differentiation primary response protein MyD88 isoform 3 [Homo sapiens]	19.3	267	3%	5722	100%
NP_001166038.1	myeloid differentiation primary response protein MyD88 isoform 1 [Homo sapiens]	19.3	286	4%	5722	100%
3L9J_C	Chain C, Selection Of A Novel Highly Specific Tnfalpha Antagonist: Insight From The Crystal Structure Of The Antagonist- Tnfalpha Complex	19.3	171	1%	5722	100%
3KQG_A	Chain A, Trimeric Structure Of Langerin >pdb\|3KQG\|B Chain B, Trimeric Structure Of Langerin >pdb\|3KQG\|C Chain C, Trimeric Structure Of Langerin >pdb\|3KQG\|D Chain D, Trimeric Structure Of Langerin >pdb\|3KQG\|E Chain E, Trimeric Structure Of Langerin >pdb\|3KQG\|F Chain F, Trimeric Structure Of Langerin	19.3	186	2%	5722	100%
3FN3_A	Chain A, Dimeric Structure Of Pd-L1 >pdb\|3FN3\|B Chain B, Dimeric Structure Of Pd-L1	19.3	139	2%	5722	80%
3IDX_H	Chain H, Crystal Structure Of Hiv-Gp120 Core In Complex With Cd4- Binding Site Antibody B13, Space Group C222 >pdb\|3IDY\|H Chain H, Crystal Structure Of Hiv-Gp120 Core In Complex With Cd4- Binding Site Antibody B13, Space Group C2221 >pdb\|3IDY\|B Chain B, Crystal Structure Of Hiv-Gp120 Core In Complex With Cd4- Binding Site Antibody B13, Space Group C2221	19.3	216	3%	5722	100%
3INU_H	Chain H, Crystal Structure Of An Unbound Kz52 Neutralizing Anti- Ebolavirus Antibody >pdb\|3INU\|M Chain M, Crystal Structure Of An Unbound Kz52 Neutralizing Anti- Ebolavirus Antibody.	19.3	201	3%	5722	100%
ACN63333.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63334.1\| B cell antibody heavy chain variable region [Homo sapiens]	19.3	102	1%	5722	87%
ACN63329.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	86.8	1%	5722	83%
ACN63324.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	102	1%	5722	87%
ACN63321.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	85%
ACN63320.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63336.1\| B cell antibody heavy chain variable region [Homo sapiens]	19.3	120	2%	5722	85%
ACN63265.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	70.4	1%	5722	83%
ACN63260.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	70.4	1%	5722	83%
ACN63225.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	105	1%	5722	85%
ACN63221.1	B cell antibody heavy chain variable region [Homo sapiens]	19.3	102	2%	5722	85%
ACN63216.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63217.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63220.1\| B cell antibody heavy chain variable region [Homo sapiens]	19.3	88.5	1%	5722	85%
3HI5_H	Chain H, Crystal Structure Of Fab Fragment Of Al-57	19.3	204	3%	5722	100%
3GKW_H	Chain H, Crystal Structure Of The Fab Fragment Of Nimotuzumab. An Anti-Epidermal Growth Factor Receptor Antibody	19.3	221	3%	5722	100%
3H0T_B	Chain B, Hepcidin-Fab Complex	19.3	256	3%	5722	83%
3FN0_H	Chain H, Crystal Structure Of Hiv-1 Neutralizing Human Fab Z13e1 In Complex With A 12-Residue Peptide Containing The Z13e1 Epitope On Gp41	19.3	252	3%	5722	100%
2VXV_H	Chain H, Crystal Structure Of Human Igg Abt-325 Fab Fragment	19.3	170	2%	5722	83%
2WII_C	Chain C, Complement C3b In Complex With Factor H Domains 1-4	19.3	139	1%	5722	83%
3HCT_A	Chain A, Crystal Structure Of Traf6 In Complex With Ubc13 In The P1 Space Group >pdb\|3HCU\|A Chain A, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2 Space Group >pdb\|3HCU\|C Chain C, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2 Space Group	19.3	140	1%	5722	100%
3HCS_A	Chain A, Crystal Structure Of The N-Terminal Domain Of Traf6 >pdb\|3HCS\|B Chain B, Crystal Structure Of The N-Terminal Domain Of Traf6	19.3	189	2%	5722	100%
3FFD_P	Chain P, Structure Of Parathyroid Hormone-Related Protein Complexed To A Neutralizing Monoclonal Antibody	19.3	52.4	0%	5722	83%
3EOA_H	Chain H, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form I >pdb\|3EOA\|B Chain B, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form I >pdb\|3EOB\|H Chain H, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form Ii >pdb\|3EOB\|B Chain B, Crystal Structure The Fab Fragment Of Efalizumab In Complex With Lfa-1 I Domain, Form Ii	19.3	168	2%	5722	83%
3EO9_H	Chain H, Crystal Structure The Fab Fragment Of Efalizumab	19.3	168	2%	5722	83%
3G6D_H	Chain H, Crystal Structure Of The Complex Between Cnto607 Fab And Il- 13 >pdb\|3G6A\|H Chain H, Crystal Structure Of Anti-Il-13 Antibody Cnto607 >pdb\|3G6A\|B Chain B, Crystal Structure Of Anti-Il-13 Antibody Cnto607	19.3	224	3%	5722	100%
3G6J_F	Chain F, C3b In Complex With A C3b Specific Fab >pdb\|3G6J\|H Chain H, C3b In Complex With A C3b Specific Fab	19.3	185	3%	5722	100%
ACJ37282.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.3	71.3	0%	5722	100%
ACJ37273.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.3	103	1%	5722	87%
ACJ37260.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	19.3	53.2	0%	5722	100%
ACJ37252.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	19.3	137	2%	5722	80%
2VXQ_H	Chain H, Crystal Structure Of The Major Grass Pollen Allergen Phl P 2 In Complex With Its Specific Ige-Fab	19.3	219	3%	5722	83%
3C22_A	Chain A, Crystal Structure Of The Carbohydrate Recognition Domain Of Human Langerin >pdb\|3C22\|B Chain B, Crystal Structure Of The Carbohydrate Recognition Domain Of Human Langerin >pdb\|3C22\|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain Of Human Langerin >pdb\|3C22\|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain Of Human Langerin	19.3	150	1%	5722	100%
3FCU_A	Chain A, Structure Of Headpiece Of Integrin Aiibb3 In Open Conformation >pdb\|3FCU\|C Chain C, Structure Of Headpiece Of Integrin Aiibb3 In Open Conformation >pdb\|3FCU\|E Chain E, Structure Of Headpiece Of Integrin Aiibb3 In Open Conformation	19.3	338	5%	5722	100%
3EYI_A	Chain A, The Crystal Structure Of The Second Z-Dna Binding Domain Of Human Dai (Zbp1) In Complex With Z-Dna >pdb\|3EYI\|B Chain B, The Crystal Structure Of The Second Z-Dna Binding Domain Of Human Dai (Zbp1) In Complex With Z-Dna	19.3	84.2	1%	5722	80%
3F62_B	Chain B, Crystal Structure Of Human Il-18 In Complex With Ectromelia Virus Il-18 Binding Protein	19.3	172	3%	5722	100%
Q969G5.2	RecName: Full=Protein kinase C delta-binding protein; AltName: Full=Serum deprivation response factor-related gene product that binds to C-kinase; Short=hSRBC; AltName: Full=Cavin-3	19.3	232	3%	5722	100%
CAR63050.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	99.3	1%	5722	100%
CAR63010.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	102	1%	5722	83%
CAR63006.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	50.7	0%	5722	80%
CAR62986.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	198	2%	5722	83%
CAR62976.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	83%
CAR62938.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	71.3	1%	5722	83%
CAR62929.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	36.5	0%	5722	80%
CAR62873.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	50.3	0%	5722	100%
CAR62850.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	121	2%	5722	83%
CAR62848.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	139	1%	5722	100%
CAR62814.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	36.5	0%	5722	66%
CAR62690.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	69.6	0%	5722	80%
CAR62683.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	72.1	1%	5722	80%
CAR62677.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	66.6	0%	5722	100%
CAR62671.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	71.7	2%	5722	83%
CAR62662.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	54.5	0%	5722	80%
CAR62641.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	85.5	1%	5722	83%
CAR62640.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	50.7	0%	5722	80%
CAR62628.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	136	1%	5722	100%
CAR62621.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	186	3%	5722	100%
CAR62600.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	87.6	1%	5722	83%
CAR62572.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	52.8	0%	5722	100%
CAR62565.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	119	2%	5722	100%
2Z5V_A	Chain A, Solution Structure Of The Tir Domain Of Human Myd88	19.3	147	2%	5722	100%
3D0V_B	Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Lleldkwaslw >pdb\|3D0L\|B Chain B, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Fp-Mper Hyb3k Construct 514gigalflgflgaags528kk-Ahx-655kneqelleldkwaslwn671 >pdb\|3IDJ\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Analog Eld(Orn)was >pdb\|3IDM\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Analog Eld(Nrg)was >pdb\|3IDN\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Analog Eld(Paf)was >pdb\|3IDG\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Aldkwd >pdb\|3IDI\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 Fab' Fragment In Complex With Gp41 Peptide Aldkwnq	19.3	272	4%	5722	100%
NP_001166040.1	myeloid differentiation primary response protein MyD88 isoform 4 [Homo sapiens]	19.3	177	3%	5722	100%
NP_001166037.1	myeloid differentiation primary response protein MyD88 isoform 5 [Homo sapiens]	19.3	159	2%	5722	100%
NP_001129513.1	histone deacetylase 11 isoform 2 [Homo sapiens]	19.3	204	2%	5722	83%
3CSY_A	Chain A, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor >pdb\|3CSY\|C Chain C, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor >pdb\|3CSY\|E Chain E, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor >pdb\|3CSY\|G Chain G, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor	19.3	233	4%	5722	100%
3BT1_A	Chain A, Structure Of Urokinase Receptor, Urokinase And Vitronectin Complex >pdb\|3BT2\|A Chain A, Structure Of Urokinase Receptor, Urokinase And Vitronectin Complex	19.3	154	1%	5722	80%
3BIK_A	Chain A, Crystal Structure Of The Pd-1PD-L1 Complex >pdb\|3BIS\|A Chain A, Crystal Structure Of The Pd-L1 >pdb\|3BIS\|B Chain B, Crystal Structure Of The Pd-L1	19.3	139	2%	5722	80%
3B2U_H	Chain H, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|C Chain C, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|F Chain F, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|J Chain J, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|N Chain N, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|Q Chain Q, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|T Chain T, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|W Chain W, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2V\|H Chain H, Crystal Structure Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8	19.3	153	2%	5722	83%
2YRP_A	Chain A, Solution Structure Of The Tig Domain From Human Nuclear Factor Of Activated T-Cells, Cytoplasmic 4	19.3	119	2%	5722	100%
ABQ02434.1	immunoglobulin heavy chain VDJ region [Homo sapiens]	19.3	52.8	0%	5722	83%
ABQ02435.1	immunoglobulin heavy chain VDJ region [Homo sapiens]	19.3	69.1	0%	5722	100%
ABQ02429.1	immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02430.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02431.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02432.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02436.1\| immunoglobulin heavy chain VDJ region [Homo sapiens]	19.3	86.3	0%	5722	100%
ABQ02406.1	immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02407.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02408.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02409.1\| immunoglobulin heavy chain VDJ region [Homo sapiens]	19.3	86.3	0%	5722	100%
ABQ02410.1	immunoglobulin heavy chain VDJ region [Homo sapiens]	19.3	86.3	0%	5722	100%
2VH5_L	Chain L, Crystal Structure Of Hras(G12v) - Anti-Ras Fv (Disulfide Free Mutant) Complex	19.3	155	2%	5722	100%
2RCJ_U	Chain U, Solution Structure Of Human Immunoglobulin M	19.3	118	1%	5722	83%
2QSC_H	Chain H, Crystal Structure Analysis Of Anti-Hiv-1 V3-Fab F425-B4e8 In Complex With A V3-Peptide	19.3	204	2%	5722	100%
ABW06577.1	CD247 [Homo sapiens] >gb\|ABW06578.1\| CD247 [Homo sapiens] >gb\|ABW06579.1\| CD247 [Homo sapiens] >gb\|ABW96174.1\| TCR zeta chain [Homo sapiens] >gb\|ABW96175.1\| TCR zeta chain [Homo sapiens] >gb\|ABW96176.1\| TCR zeta chain [Homo sapiens] >gb\|ABW96177.1\| TCR zeta chain [Homo sapiens] >gb\|ABW96178.1\| TCR zeta chain [Homo sapiens] >gb\|ABW96179.1\| TCR zeta chain [Homo sapiens]	19.3	52.8	0%	5722	100%
3BBS_A	Chain A, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BBS\|B Chain B, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BBS\|C Chain C, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BBS\|D Chain D, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC6\|A Chain A, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC6\|B Chain B, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC6\|C Chain C, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC6\|D Chain D, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC7\|A Chain A, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC7\|B Chain B, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC7\|C Chain C, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site >pdb\|3BC7\|D Chain D, The Carbohydrate Recognition Domain Of Langerin Reveals High Structural Similarity With The One Of Dc-Sign But An Additional, Calcium-Independent Sugar-Binding Site	19.3	134	1%	5722	100%
2R0K_H	Chain H, Protease Domain Of Hgfa With Inhibitor Fab58	19.3	170	2%	5722	100%
3B9V_A	Chain A, Crystal Structure Of An Autonomous Vh Domain >pdb\|3B9V\|B Chain B, Crystal Structure Of An Autonomous Vh Domain >pdb\|3B9V\|C Chain C, Crystal Structure Of An Autonomous Vh Domain >pdb\|3B9V\|D Chain D, Crystal Structure Of An Autonomous Vh Domain	19.3	106	1%	5722	100%
2R32_A	Chain A, Crystal Structure Of Human Gitrl Variant	19.3	167	2%	5722	100%
2QFG_A	Chain A, Solution Structure Of The N-Terminal Scr-15 FRAGMENT OF Complement Factor H	19.3	170	2%	5722	100%
2JCC_A	Chain A, Ah3 Recognition Of Mutant Hla-A2 W167a >pdb\|2JCC\|H Chain H, Ah3 Recognition Of Mutant Hla-A2 W167a	19.3	136	1%	5722	100%
2QR0_C	Chain C, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|D Chain D, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|I Chain I, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|J Chain J, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|O Chain O, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|P Chain P, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|U Chain U, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|V Chain V, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs	19.3	134	1%	5722	100%
2QR0_B	Chain B, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|F Chain F, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|H Chain H, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|L Chain L, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|N Chain N, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|R Chain R, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|T Chain T, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs >pdb\|2QR0\|X Chain X, Structure Of Vegf Complexed To A Fab Containing Tyr And Ser In The Cdrs	19.3	219	4%	5722	100%
2HWZ_H	Chain H, Fab Fragment Of Humanized Anti-Viral Antibody Medi-493 (Synagis Tm)	19.3	134	2%	5722	100%
2PW1_B	Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwnsl >pdb\|2PW2\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwksl >pdb\|3DRO\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Antibody 2f5 In Complex With Gp41 Peptide Elleldkwaslwn Grown In Ammonium Sulfate >pdb\|3DRQ\|B Chain B, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Fp-Mper Hyb3k Construct 514gigalflgflgaags528kk-Ahx-655kneqelleldkwaslwn671 Soaked In Peg2-Propanol Solution >pdb\|3DRT\|B Chain B, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Scrambledfp-Mper Scrhyb3k Construct Gigafgllgflaagskk-Ahx-K656neqelleldkwaslwn671 >pdb\|3EGS\|B Chain B, Crystal Structure Of The Hiv-1 Broadly Neutralizing Antibody 2f5 In Complex With The Gp41 Scrambledfp-Mper Scrhyb3k Construct Gigafgllgflaagskk-Ahx-K656neqelleldkwaslwn671 Soaked In Ammonium Sulfate	19.3	272	4%	5722	100%
2GI7_A	Chain A, Crystal Structure Of Human Platelet Glycoprotein Vi (Gpvi) >pdb\|2GI7\|B Chain B, Crystal Structure Of Human Platelet Glycoprotein Vi (Gpvi)	19.3	102	1%	5722	100%
NP_001076436.1	family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 isoform 1 [Homo sapiens]	19.3	121	3%	5722	100%
AAH47441.2	SplA/ryanodine receptor domain and SOCS box containing 3 [Homo sapiens]	19.3	448	5%	5722	100%
2J3F_A	Chain A, L-Ficolin Complexed To N-Acetyl-D-Galactosamine >pdb\|2J3F\|B Chain B, L-Ficolin Complexed To N-Acetyl-D-Galactosamine >pdb\|2J3F\|C Chain C, L-Ficolin Complexed To N-Acetyl-D-Galactosamine >pdb\|2J3F\|E Chain E, L-Ficolin Complexed To N-Acetyl-D-Galactosamine >pdb\|2J3F\|F Chain F, L-Ficolin Complexed To N-Acetyl-D-Galactosamine >pdb\|2J3O\|A Chain A, L-Ficolin Complexed To N-Acetyl-D-Glucosamin >pdb\|2J3O\|B Chain B, L-Ficolin Complexed To N-Acetyl-D-Glucosamin >pdb\|2J3O\|C Chain C, L-Ficolin Complexed To N-Acetyl-D-Glucosamin >pdb\|2J3O\|D Chain D, L-Ficolin Complexed To N-Acetyl-D-Glucosamin >pdb\|2J3O\|E Chain E, L-Ficolin Complexed To N-Acetyl-D-Glucosamin >pdb\|2J3O\|F Chain F, L-Ficolin Complexed To N-Acetyl-D-Glucosamin	19.3	88.0	1%	5722	80%
2J0G_A	Chain A, L-Ficolin Complexed To N-Acetyl-Mannosamine >pdb\|2J0G\|B Chain B, L-Ficolin Complexed To N-Acetyl-Mannosamine >pdb\|2J0G\|C Chain C, L-Ficolin Complexed To N-Acetyl-Mannosamine >pdb\|2J0G\|D Chain D, L-Ficolin Complexed To N-Acetyl-Mannosamine >pdb\|2J0G\|E Chain E, L-Ficolin Complexed To N-Acetyl-Mannosamine >pdb\|2J0G\|F Chain F, L-Ficolin Complexed To N-Acetyl-Mannosamine >pdb\|2J0H\|A Chain A, L-Ficolin Complexed To Acetyl-Choline >pdb\|2J0H\|B Chain B, L-Ficolin Complexed To Acetyl-Choline >pdb\|2J0H\|C Chain C, L-Ficolin Complexed To Acetyl-Choline >pdb\|2J0H\|D Chain D, L-Ficolin Complexed To Acetyl-Choline >pdb\|2J0H\|E Chain E, L-Ficolin Complexed To Acetyl-Choline >pdb\|2J0H\|F Chain F, L-Ficolin Complexed To Acetyl-Choline >pdb\|2J0Y\|A Chain A, L-Ficolin Complexed To B-1,3-D-Glucan >pdb\|2J0Y\|B Chain B, L-Ficolin Complexed To B-1,3-D-Glucan >pdb\|2J0Y\|C Chain C, L-Ficolin Complexed To B-1,3-D-Glucan >pdb\|2J0Y\|D Chain D, L-Ficolin Complexed To B-1,3-D-Glucan >pdb\|2J0Y\|E Chain E, L-Ficolin Complexed To B-1,3-D-Glucan >pdb\|2J0Y\|F Chain F, L-Ficolin Complexed To B-1,3-D-Glucan >pdb\|2J1G\|A Chain A, L-Ficolin Complexed To N-Acetyl-Cystein >pdb\|2J1G\|B Chain B, L-Ficolin Complexed To N-Acetyl-Cystein >pdb\|2J1G\|C Chain C, L-Ficolin Complexed To N-Acetyl-Cystein >pdb\|2J1G\|D Chain D, L-Ficolin Complexed To N-Acetyl-Cystein >pdb\|2J1G\|E Chain E, L-Ficolin Complexed To N-Acetyl-Cystein >pdb\|2J1G\|F Chain F, L-Ficolin Complexed To N-Acetyl-Cystein >pdb\|2J2P\|A Chain A, L-Ficolin Complexed To N-Acetyl-Cystein (150mm) >pdb\|2J2P\|B Chain B, L-Ficolin Complexed To N-Acetyl-Cystein (150mm) >pdb\|2J2P\|C Chain C, L-Ficolin Complexed To N-Acetyl-Cystein (150mm) >pdb\|2J2P\|D Chain D, L-Ficolin Complexed To N-Acetyl-Cystein (150mm) >pdb\|2J2P\|E Chain E, L-Ficolin Complexed To N-Acetyl-Cystein (150mm) >pdb\|2J2P\|F Chain F, L-Ficolin Complexed To N-Acetyl-Cystein (150mm) >pdb\|2J3G\|A Chain A, L-Ficolin >pdb\|2J3G\|B Chain B, L-Ficolin >pdb\|2J3G\|C Chain C, L-Ficolin >pdb\|2J3G\|D Chain D, L-Ficolin >pdb\|2J3G\|E Chain E, L-Ficolin >pdb\|2J3G\|F Chain F, L-Ficolin >pdb\|2J3U\|A Chain A, L-Ficolin Complexed To Galactose >pdb\|2J3U\|B Chain B, L-Ficolin Complexed To Galactose >pdb\|2J3U\|C Chain C, L-Ficolin Complexed To Galactose >pdb\|2J3U\|D Chain D, L-Ficolin Complexed To Galactose >pdb\|2J3U\|E Chain E, L-Ficolin Complexed To Galactose >pdb\|2J3U\|F Chain F, L-Ficolin Complexed To Galactose >pdb\|2J61\|B Chain B, L-Ficolin Complexed To N-Acetylglucosamine (Forme C)	19.3	88.0	1%	5722	80%
2J3F_D	Chain D, L-Ficolin Complexed To N-Acetyl-D-Galactosamine	19.3	88.0	1%	5722	80%
2FX7_H	Chain H, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A 16-Residue Peptide Encompassing The 4e10 Epitope On Gp41	19.3	119	2%	5722	83%
2D39_A	Chain A, Trivalent Recognition Unit Of Innate Immunity System; Crystal Structure Of Human M-Ficolin Fibrinogen-Like Domain >pdb\|2D39\|B Chain B, Trivalent Recognition Unit Of Innate Immunity System; Crystal Structure Of Human M-Ficolin Fibrinogen-Like Domain >pdb\|2D39\|C Chain C, Trivalent Recognition Unit Of Innate Immunity System; Crystal Structure Of Human M-Ficolin Fibrinogen-Like Domain	19.3	174	2%	5722	80%
2FX8_H	Chain H, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|I Chain I, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|J Chain J, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|K Chain K, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX9\|H Chain H, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A Thioether-Linked Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX9\|I Chain I, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A Thioether-Linked Peptide Encompassing The 4e10 Epitope On Gp41	19.3	119	2%	5722	83%
NP_002459.2	myeloid differentiation primary response protein MyD88 isoform 2 [Homo sapiens]	19.3	269	4%	5722	100%
2HFF_B	Chain B, Crystal Structure Of Cb2 Fab >pdb\|2HFF\|H Chain H, Crystal Structure Of Cb2 Fab	19.3	191	3%	5722	100%
2HFG_H	Chain H, Crystal Structure Of Hbr3 Bound To Cb3s-Fab	19.3	189	3%	5722	83%
2HDL_A	Chain A, Solution Structure Of BrakCXCL14	19.3	82.5	1%	5722	80%
2H9G_B	Chain B, Crystal Structure Of Phage Derived Fab Bdf1 With Human Death Receptor 5 (Dr5) >pdb\|2H9G\|H Chain H, Crystal Structure Of Phage Derived Fab Bdf1 With Human Death Receptor 5 (Dr5)	19.3	173	2%	5722	100%
2FFK_B	Chain B, Solution Structure Of The Complex Between Poxvirus-Encoded Cc Chemokine Inhibitor Vcci And Human Mip-1beta, Minimized Average Structure >pdb\|2FIN\|B Chain B, Solution Structure Of The Complex Between Poxvirus-Encoded Cc Chemokine Inhibitor Vcci And Human Mip-1beta, Ensemble Structure	19.3	71.7	1%	5722	83%
2H2R_A	Chain A, Crystal Structure Of The Human Cd23 Lectin Domain, Apo Form >pdb\|2H2R\|B Chain B, Crystal Structure Of The Human Cd23 Lectin Domain, Apo Form >pdb\|2H2T\|B Chain B, Cd23 Lectin Domain, Calcium 2+-Bound	19.3	221	2%	5722	100%
ABG38412.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	121	2%	5722	83%
ABG38380.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	54.5	0%	5722	83%
ABG38339.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	51.1	0%	5722	83%
ABG38374.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	54.5	0%	5722	83%
ABG38360.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	104	2%	5722	83%
ABG38355.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	87.2	2%	5722	83%
ABG38354.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	90.1	1%	5722	66%
ABG38348.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	51.5	0%	5722	83%
CAJ14072.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14119.1\| T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14081.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14088.1\| T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	83%
CAJ14116.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14105.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14107.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14120.1	T-cell receptor beta chain [Homo sapiens]	19.3	50.7	0%	5722	100%
CAJ14103.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14115.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14113.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14108.1	T-cell receptor beta chain [Homo sapiens]	19.3	36.5	0%	5722	100%
CAJ14069.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14118.1\| T-cell receptor beta chain [Homo sapiens]	19.3	36.5	0%	5722	100%
CAJ14110.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14076.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14117.1\| T-cell receptor beta chain [Homo sapiens]	19.3	35.6	0%	5722	100%
CAJ14114.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14104.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14074.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14112.1\| T-cell receptor beta chain [Homo sapiens]	19.3	36.1	0%	5722	100%
CAJ14111.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14122.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ14106.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14109.1\| T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	100%
CAJ90637.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	123	1%	5722	100%
2DD8_H	Chain H, Crystal Structure Of Sars-Cov Spike Receptor-Binding Domain Complexed With Neutralizing Antibody >pdb\|2G75\|A Chain A, Crystal Structure Of Anti-Sars M396 Antibody >pdb\|2G75\|C Chain C, Crystal Structure Of Anti-Sars M396 Antibody	19.3	185	2%	5722	100%
2FJF_H	Chain H, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|B Chain B, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|D Chain D, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|F Chain F, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|I Chain I, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|K Chain K, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|N Chain N, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|P Chain P, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|R Chain R, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|T Chain T, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|V Chain V, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|X Chain X, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab	19.3	185	3%	5722	100%
2FD6_A	Chain A, Structure Of Human Urokinase Plasminogen Activator In Complex With Urokinase Receptor And An Anti-Upar Antibody At 1.9 A	19.3	154	1%	5722	80%
NP_001014444.1	mu-crystallin homolog isoform 2 [Homo sapiens]	19.3	253	3%	5722	100%
NP_068600.4	heparanase-2 isoform 1 [Homo sapiens]	19.3	481	6%	5722	100%
NP_001159716.1	heparanase-2 isoform 2 [Homo sapiens]	19.3	397	4%	5722	100%
NP_001159718.1	heparanase-2 isoform 4 [Homo sapiens]	19.3	418	5%	5722	100%
AAH24244.1	SplA/ryanodine receptor domain and SOCS box containing 3 [Homo sapiens]	19.3	464	5%	5722	100%
NP_001070974.1	tachykinin-4 isoform alpha-2 [Homo sapiens]	19.3	83.4	1%	5722	83%
NP_919296.1	ubiquitin-conjugating enzyme E2 J2 isoform 1 [Homo sapiens]	19.3	172	3%	5722	100%
NP_919439.1	ubiquitin-conjugating enzyme E2 J2 isoform 3 [Homo sapiens] >ref\|NP_919440.1\| ubiquitin-conjugating enzyme E2 J2 isoform 3 [Homo sapiens]	19.3	138	2%	5722	100%
NP_001070973.1	tachykinin-4 isoform delta [Homo sapiens]	19.3	101	1%	5722	100%
NP_001070971.1	tachykinin-4 isoform beta [Homo sapiens]	19.3	83.4	1%	5722	83%
NP_733786.2	tachykinin-4 isoform alpha [Homo sapiens]	19.3	99.7	1%	5722	83%
NP_001070972.1	tachykinin-4 isoform gamma [Homo sapiens]	19.3	83.4	1%	5722	83%
AAK61293.1	JFP13 [Homo sapiens]	19.3	255	3%	5722	100%
AAM18704.1	T-cell immune regulator 1 transcript variant 3 [Homo sapiens]	19.3	67.0	0%	5722	71%
NP_116171.3	hepatitis A virus cellular receptor 2 precursor [Homo sapiens]	19.3	298	3%	5722	85%
NP_543137.2	SPRY domain-containing SOCS box protein 3 [Homo sapiens] >sp\|Q6PJ21.2\|SPSB3_HUMAN RecName: Full=SPRY domain-containing SOCS box protein 3; Short=SSB-3 >gb\|AAL57347.1\|AF403028_1 SPRY domain-containing SOCS box protein SSB-3 [Homo sapiens] >gb\|EAW85619.1\| splA/ryanodine receptor domain and SOCS box containing 3, isoform CRA_b [Homo sapiens] >gb\|EAW85620.1\| splA/ryanodine receptor domain and SOCS box containing 3, isoform CRA_b [Homo sapiens] >gb\|AAH07588.2\| SplA/ryanodine receptor domain and SOCS box containing 3 [Homo sapiens]	19.3	464	5%	5722	100%
O97980.1	RecName: Full=Minor histocompatibility protein HB-1; Contains: RecName: Full=Minor histocompatibility antigen HB-1; Short=mHag HB-1	19.3	70.0	0%	5722	80%
1HKL_L	Chain L, Free And Liganded Form Of An Esterolytic Catalytic Antibody	19.3	272	3%	5722	100%
1B6U_A	Chain A, Crystal Structure Of The Human Killer Cell Inhibitory Receptor (Kir2dl3) Specific For Hla-Cw3 Related Alleles	19.3	302	4%	5722	100%
1WGL_A	Chain A, Solution Structure Of Cue Domain In The C-Terminal Of Human Toll-Interacting Protein (Tollip)	19.3	52.0	0%	5722	71%
1FQQ_A	Chain A, Solution Structure Of Human Beta-Defensin-2	19.3	19.3	0%	5722	80%
NP_001138929.1	natural cytotoxicity triggering receptor 1 isoform b [Homo sapiens]	19.3	355	4%	5722	100%
NP_620587.2	CMRF35-like molecule 1 precursor [Homo sapiens] >sp\|Q8TDQ1.3\|CLM1_HUMAN RecName: Full=CMRF35-like molecule 1; Short=CLM-1; AltName: Full=CD300 antigen-like family member F; AltName: Full=Immune receptor expressed on myeloid cells 1; Short=IREM-1; AltName: Full=Immunoglobulin superfamily member 13; Short=IgSF13; AltName: Full=NK inhibitory receptor; AltName: CD_antigen=CD300f; Flags: Precursor	19.3	202	2%	5722	100%
AAP57942.1	inhibitory receptor IREM1 [Homo sapiens]	19.3	255	3%	5722	100%
AAP42152.1	immune receptor expressed on myeloid cells splice variant 1 [Homo sapiens]	19.3	238	3%	5722	100%
AAA36068.1	immunoglobulin heavy chain V-region [Homo sapiens]	19.3	35.2	0%	5722	66%
AAC43027.1	anti-mucin1 heavy chain variable region [Homo sapiens]	19.3	85.1	1%	5722	66%
AAC68899.1	envelope protein RIC-7 [Homo sapiens]	19.3	239	2%	5722	100%
AAB25912.2	anti-Hib capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	19.3	102	1%	5722	100%
NP_683708.1	toll/interleukin-1 receptor domain-containing adapter protein isoform b [Homo sapiens]	19.3	301	4%	5722	83%
NP_002811.1	parathyroid hormone-related protein isoform 2 preproprotein [Homo sapiens] >ref\|NP_945315.1\| parathyroid hormone-related protein isoform 2 preproprotein [Homo sapiens]	19.3	100	1%	5722	100%
AAC68898.1	envelope protein RIC-6 [Homo sapiens]	19.3	172	2%	5722	100%
AAG14421.1	interleukin-1-related protein long isoform [Homo sapiens]	19.3	187	2%	5722	100%
AAL04542.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAA36070.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	19.3	203	2%	5722	83%
AAA36067.1	immunoglobulin heavy chain VDJC region [Homo sapiens]	19.3	261	4%	5722	83%
AAL04522.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	19.3	138	2%	5722	100%
NP_001761.3	B-lymphocyte antigen CD19 isoform 2 precursor [Homo sapiens]	19.3	392	5%	5722	100%
AAL57836.1	anti-hepatitis B surface antigen immunoglobulin heavy chain variable region [Homo sapiens]	19.3	153	2%	5722	83%
AAC68894.1	envelope protein RIC-2 [Homo sapiens]	19.3	193	2%	5722	100%
AAC68896.1	envelope protein RIC-4 [Homo sapiens]	19.3	172	2%	5722	85%
AAG14422.1	interleukin-1-related protein short isoform [Homo sapiens]	19.3	186	2%	5722	100%
AAB52590.1	immunoglobulin heavy chain [Homo sapiens]	19.3	88.0	1%	5722	100%
AAA65699.1	immunoglobulin variable region used by the ITC63B lambda light chain (subgroup V lambda III) (anti-cytomeglovirus glycoprotein B (AD-1 epitope)) [Homo sapiens]	19.3	101	1%	5722	100%
AAK52609.1	ubiquitin conjugating enzyme 6 [Homo sapiens]	19.3	140	3%	5722	80%
AAZ32303.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	87.6	1%	5722	83%
AAZ32302.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	122	1%	5722	83%
AAZ32305.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	67.0	0%	5722	83%
AAH41897.1	SPSB3 protein [Homo sapiens] >gb\|EAW85622.1\| splA/ryanodine receptor domain and SOCS box containing 3, isoform CRA_d [Homo sapiens] >gb\|EAW85623.1\| splA/ryanodine receptor domain and SOCS box containing 3, isoform CRA_d [Homo sapiens]	19.3	327	4%	5722	100%
AAY57148.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	68.3	0%	5722	100%
AAY57141.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	85.9	1%	5722	100%
AAY57139.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	67.9	0%	5722	100%
AAY57092.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	203	3%	5722	100%
AAY57083.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	119	2%	5722	100%
AAY33459.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAY33450.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	54.5	0%	5722	83%
AAY33434.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	139	3%	5722	100%
AAY33443.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	69.1	0%	5722	100%
AAY33457.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	52.0	0%	5722	100%
AAY33413.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAY33448.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	103	1%	5722	83%
AAY33395.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	85.5	1%	5722	83%
AAY33402.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAY33436.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	103	1%	5722	83%
AAY33460.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	88.0	1%	5722	100%
AAY33431.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	51.5	0%	5722	83%
AAY33338.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	36.1	0%	5722	83%
AAY33381.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	51.5	0%	5722	83%
AAY33262.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	100%
AAY33233.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	100%
AAY33371.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	68.7	0%	5722	83%
AAY33350.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAY33377.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAY33204.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.3	34.8	0%	5722	66%
AAY33393.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	156	3%	5722	100%
AAY33369.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	34.8	0%	5722	83%
AAY33232.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	100%
AAY33376.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	72.5	0%	5722	100%
AAY33380.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	19.3	51.5	0%	5722	83%
AAY33275.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	100%
AAY16638.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	119	1%	5722	83%
AAY16620.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	83.8	1%	5722	83%
AAY16621.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	101	1%	5722	83%
AAY16602.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	51.1	0%	5722	83%
AAY16608.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	120	1%	5722	83%
AAY16604.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	102	1%	5722	83%
AAY16594.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	103	1%	5722	83%
AAY16637.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	102	1%	5722	83%
AAY16633.1	immunoglobulin kappa light chain [Homo sapiens]	19.3	118	1%	5722	80%
AAY16592.1	immunoglobulin lambda light chain [Homo sapiens] >gb\|AAY16595.1\| immunoglobulin lambda light chain [Homo sapiens]	19.3	100	1%	5722	83%
AAY16606.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	54.5	0%	5722	83%
AAY16605.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	51.5	0%	5722	83%
AAY16603.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	118	1%	5722	83%
AAY16593.1	immunoglobulin lambda light chain [Homo sapiens]	19.3	85.1	1%	5722	83%
NP_001122091.2	leucine zipper protein 6 [Homo sapiens] >sp\|Q538Z0.1\|LUZP6_HUMAN RecName: Full=Leucine zipper protein 6; AltName: Full=Myeloproliferative disease-associated 6 kDa antigen >gb\|AAU14892.1\| myeloproliferative disease-associated SEREX antigen [Homo sapiens]	19.3	51.1	0%	5722	66%
AAC68893.1	envelope protein RIC-1 [Homo sapiens]	19.3	226	2%	5722	100%
AAL04524.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	19.3	149	1%	5722	83%
NP_003764.3	hyaluronidase-2 precursor [Homo sapiens] >ref\|NP_149348.2\| hyaluronidase-2 precursor [Homo sapiens]	19.3	274	3%	5722	100%
AAL04526.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	19.3	70.0	0%	5722	66%
NP_067042.1	junctional adhesion molecule B precursor [Homo sapiens]	19.3	173	2%	5722	100%
NP_777578.2	mast cell-expressed membrane protein 1 [Homo sapiens]	19.3	202	2%	5722	100%
2BCK_A	Chain A, Crystal Structure Of Hla-A2402 Complexed With A Telomerase Peptide >pdb\|2BCK\|D Chain D, Crystal Structure Of Hla-A2402 Complexed With A Telomerase Peptide	19.3	154	2%	5722	83%
2F4W_A	Chain A, Human Ubiquitin-Conjugating Enzyme E2 J2 >pdb\|2F4W\|B Chain B, Human Ubiquitin-Conjugating Enzyme E2 J2	19.3	124	2%	5722	71%
CAJ00287.1	T-cell receptor alpha chain [Homo sapiens]	19.3	19.3	0%	5722	83%
CAJ00284.1	T-cell receptor alpha chain [Homo sapiens]	19.3	19.3	0%	5722	100%
1T8C_A	Chain A, Structure Of The C-Type Lectin Domain Of Cd23 >pdb\|1T8D\|A Chain A, Structure Of The C-Type Lectin Domain Of Cd23	19.3	170	2%	5722	100%
NP_525128.2	beta-defensin 104 precursor [Homo sapiens]	19.3	72.1	1%	5722	100%
1T0P_B	Chain B, Structural Basis Of Icam Recognition By Integrin Alpahlbeta2 Revealed In The Complex Structure Of Binding Domains Of Icam-3 And Alphalbeta2 At 1.65 A	19.3	121	1%	5722	100%
1TZG_H	Chain H, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A 13-Residue Peptide Containing The 4e10 Epitope On Gp41 >pdb\|1TZG\|I Chain I, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A 13-Residue Peptide Containing The 4e10 Epitope On Gp41	19.3	119	2%	5722	83%
1TWE_A	Chain A, Interleukin 1 Beta Mutant F101y	19.3	101	1%	5722	83%
1TWM_A	Chain A, Interleukin-1 Beta Mutant F146y	19.3	101	1%	5722	83%
1TOO_A	Chain A, Interleukin 1b Mutant F146w	19.3	101	1%	5722	83%
1T4Q_A	Chain A, Interleukin 1 Beta F101w	19.3	104	1%	5722	83%
1XED_A	Chain A, Crystal Structure Of A Ligand-Binding Domain Of The Human Polymeric Ig Receptor, Pigr >pdb\|1XED\|B Chain B, Crystal Structure Of A Ligand-Binding Domain Of The Human Polymeric Ig Receptor, Pigr >pdb\|1XED\|C Chain C, Crystal Structure Of A Ligand-Binding Domain Of The Human Polymeric Ig Receptor, Pigr >pdb\|1XED\|D Chain D, Crystal Structure Of A Ligand-Binding Domain Of The Human Polymeric Ig Receptor, Pigr >pdb\|1XED\|E Chain E, Crystal Structure Of A Ligand-Binding Domain Of The Human Polymeric Ig Receptor, Pigr >pdb\|1XED\|F Chain F, Crystal Structure Of A Ligand-Binding Domain Of The Human Polymeric Ig Receptor, Pigr	19.3	87.6	1%	5722	85%
3BO8_A	Chain A, The High Resolution Crystal Structure Of Hla-A1 Complexed With The Mage-A1 Peptide	19.3	150	2%	5722	66%
1U92_B	Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Analog E-[dap]- Dkwqs (Cyclic)	19.3	272	4%	5722	100%
1T04_B	Chain B, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma Fab In C2 Space Group >pdb\|1T04\|D Chain D, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma Fab In C2 Space Group	19.3	189	3%	5722	83%
1T3F_B	Chain B, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma Fab (Huzaf) In P21 21 21 Space Group	19.3	189	3%	5722	83%
1SMO_A	Chain A, Crystal Structure Of Human Triggering Receptor Expressed On Myeloid Cells 1 (Trem-1) At 1.47 >pdb\|1SMO\|B Chain B, Crystal Structure Of Human Triggering Receptor Expressed On Myeloid Cells 1 (Trem-1) At 1.47 .	19.3	103	1%	5722	100%
1U8H_B	Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Aldkwas >pdb\|1U8I\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwan >pdb\|1U8J\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkwag >pdb\|1U8L\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Dldrwas >pdb\|1U8M\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkyas >pdb\|1U8N\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkfas >pdb\|1U8O\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldkhas >pdb\|1U8P\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Ecdkwcs >pdb\|1U8Q\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Elekwas >pdb\|1U91\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Analog Endkw- [dap]-S (Cyclic) >pdb\|1U93\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Analog Eqdkw- [dap]-S (Cyclic) >pdb\|1U95\|B Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Eldhwas	19.3	272	4%	5722	100%
1U8K_B	Chain B, Crystal Structure Of The Hiv-1 Cross Neutralizing Monoclonal Antibody 2f5 In Complex With Gp41 Peptide Leldkwasl	19.3	288	5%	5722	100%
1S3K_H	Chain H, Crystal Structure Of A Humanized Fab (Hu3s193) In Complex With The Lewis Y Tetrasaccharide >pdb\|3EYV\|H Chain H, Anti-Lewis Y Fab Fragment With Lewis Y Antigen In The Presence Of Zinc Ions >pdb\|3EYV\|B Chain B, Anti-Lewis Y Fab Fragment With Lewis Y Antigen In The Presence Of Zinc Ions	19.3	235	3%	5722	83%
1Q94_A	Chain A, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1Q94\|D Chain D, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1QVO\|A Chain A, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1QVO\|D Chain D, Structures Of Hla-A1101 In Complex With Immunodominant Nonamer And Decamer Hiv-1 Epitopes Clearly Reveal The Presence Of A Middle Anchor Residue >pdb\|1X7Q\|A Chain A, Crystal Structure Of Hla-A1101 With Sars Nucleocapsid Peptide >pdb\|2HN7\|A Chain A, Hla-A1101 In Complex With Hbv Peptide Homologue	19.3	118	2%	5722	66%
CAG29718.1	immunoglobulin heavy chain [Homo sapiens]	19.3	85.9	1%	5722	83%
CAG29717.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62720.1\| immunoglobulin heavy chain variable region [Homo sapiens]	19.3	104	1%	5722	100%
CAG29700.1	immunoglobulin kappa light chain [Homo sapiens] >emb\|CAR62739.1\| immunoglobulin kappa chain variable region [Homo sapiens]	19.3	36.9	0%	5722	83%
CAE54361.1	immunoglobulin light chain [Homo sapiens]	19.3	105	1%	5722	100%
CAE54371.1	immunoglobulin heavy chain [Homo sapiens]	19.3	136	1%	5722	83%
CAE54370.1	immunoglobulin heavy chain [Homo sapiens]	19.3	119	2%	5722	100%
1RHH_B	Chain B, Crystal Structure Of The Broadly Hiv-1 Neutralizing Fab X5 At 1.90 Angstrom Resolution >pdb\|1RHH\|D Chain D, Crystal Structure Of The Broadly Hiv-1 Neutralizing Fab X5 At 1.90 Angstrom Resolution	19.3	268	3%	5722	100%
1RZI_A	Chain A, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|C Chain C, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|E Chain E, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|G Chain G, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|I Chain I, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|K Chain K, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|M Chain M, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab >pdb\|1RZI\|O Chain O, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 47e Fab	19.3	223	2%	5722	100%
1PY2_A	Chain A, Structure Of A 60 Nm Small Molecule Bound To A Hot Spot On Il-2 >pdb\|1PY2\|B Chain B, Structure Of A 60 Nm Small Molecule Bound To A Hot Spot On Il-2 >pdb\|1PY2\|C Chain C, Structure Of A 60 Nm Small Molecule Bound To A Hot Spot On Il-2 >pdb\|1PY2\|D Chain D, Structure Of A 60 Nm Small Molecule Bound To A Hot Spot On Il-2	19.3	103	1%	5722	100%
1NL0_H	Chain H, Crystal Structure Of Human Factor Ix Gla Domain In Complex Of An Inhibitory Antibody, 10c12	19.3	167	2%	5722	100%
1RZF_H	Chain H, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody E51	19.3	153	2%	5722	83%
1Q8M_A	Chain A, Crystal Structure Of The Human Myeloid Cell Activating Receptor Trem-1 >pdb\|1Q8M\|B Chain B, Crystal Structure Of The Human Myeloid Cell Activating Receptor Trem-1 >pdb\|1Q8M\|C Chain C, Crystal Structure Of The Human Myeloid Cell Activating Receptor Trem-1 >pdb\|1Q8M\|D Chain D, Crystal Structure Of The Human Myeloid Cell Activating Receptor Trem-1	19.3	103	1%	5722	100%
1P6F_A	Chain A, Structure Of The Human Natural Cytotoxicity Receptor Nkp46	19.3	206	2%	5722	100%
1PG7_H	Chain H, Murine 6a6 Fab In Complex With Humanized Anti-Tissue Factor D3h44 Fab >pdb\|1PG7\|I Chain I, Murine 6a6 Fab In Complex With Humanized Anti-Tissue Factor D3h44 Fab	19.3	182	3%	5722	100%
3BQU_B	Chain B, Crystal Structure Of The 2f5 Fab'-3h6 Fab Complex	19.3	272	4%	5722	100%
CAD89243.1	immunoglobulin heavy chain [Homo sapiens]	19.3	51.1	0%	5722	80%
CAD89259.1	immunoglobulin kappa light chain [Homo sapiens]	19.3	54.5	0%	5722	80%
CAD89250.1	immunoglobulin kappa light chain [Homo sapiens]	19.3	54.5	0%	5722	80%
CAD88683.1	immunoglobulin heavy chain [Homo sapiens]	19.3	138	1%	5722	83%
CAD88754.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.3	86.8	1%	5722	83%
CAD88736.1	immunoglobulin heavy chain [Homo sapiens]	19.3	87.6	1%	5722	85%
CAD88733.1	immunoglobulin heavy chain [Homo sapiens]	19.3	71.7	0%	5722	83%
CAD88696.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.3	102	1%	5722	75%
CAD88686.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.3	54.5	0%	5722	80%
CAD88748.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.3	88.5	1%	5722	80%
CAD88688.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.3	54.5	0%	5722	80%
CAD88701.1	immunoglobulin kappa light chain variable region [Homo sapiens]	19.3	100	1%	5722	80%
NP_002334.2	lactotransferrin precursor [Homo sapiens]	19.3	555	7%	5722	100%
NP_055300.1	hematopoietic prostaglandin D synthase [Homo sapiens]	19.3	67.9	1%	5722	83%
NP_000725.1	T-cell surface glycoprotein CD3 zeta chain isoform 2 precursor [Homo sapiens]	19.3	137	1%	5722	100%
1HXM_A	Chain A, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR >pdb\|1HXM\|C Chain C, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR >pdb\|1HXM\|E Chain E, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR >pdb\|1HXM\|G Chain G, Crystal Structure Of A Human Vgamma9VDELTA2 T CELL RECEPTOR	19.3	170	2%	5722	80%
CAC28015.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.3	67.5	0%	5722	83%
CAB59383.1	T cell receptor beta chain variable region [Homo sapiens]	19.3	107	1%	5722	100%
CAC03893.1	T-cell receptor beta chain [Homo sapiens]	19.3	34.8	0%	5722	100%
ABB01008.1	interleukin 10 [Homo sapiens]	19.3	152	2%	5722	80%
CAC03936.1	T-cell receptor beta chain [Homo sapiens]	19.3	107	1%	5722	100%
1Y6K_L	Chain L, Crystal Structure Of Human Il-10 Complexed With The Soluble Il-10r1 Chain	19.3	119	2%	5722	80%
NP_054862.1	programmed cell death 1 ligand 1 precursor [Homo sapiens]	19.3	226	3%	5722	100%
CAC28014.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.3	140	2%	5722	100%
1PW6_A	Chain A, Low Micromolar Small Molecule Inhibitor Of Il-2 >pdb\|1PW6\|B Chain B, Low Micromolar Small Molecule Inhibitor Of Il-2 >pdb\|1Z92\|A Chain A, Structure Of Interleukin-2 With Its Alpha Receptor	19.3	103	1%	5722	100%
AAF28870.1	HOM-TES-85 tumor antigen [Homo sapiens]	19.3	289	3%	5722	83%
NP_005832.1	protein sprouty homolog 1 [Homo sapiens] >ref\|NP_955359.1\| protein sprouty homolog 1 [Homo sapiens]	19.3	205	3%	5722	100%
2RCS_H	Chain H, Immunoglobulin 48g7 Germline Fab-Affinity Maturation Of An Esterolytic Antibody	19.3	188	3%	5722	100%
NP_004549.1	neurturin preproprotein [Homo sapiens]	19.3	170	2%	5722	100%
1CZ8_V	Chain V, Vascular Endothelial Growth Factor In Complex With An Affinity Matured Antibody >pdb\|1CZ8\|W Chain W, Vascular Endothelial Growth Factor In Complex With An Affinity Matured Antibody	19.3	118	1%	5722	100%
NP_001138930.1	natural cytotoxicity triggering receptor 1 isoform c [Homo sapiens]	19.3	355	4%	5722	100%
CAC03984.1	T-cell receptor beta chain [Homo sapiens]	19.3	139	1%	5722	100%
CAB59386.1	T cell receptor beta chain variable region [Homo sapiens]	19.3	89.3	1%	5722	100%
CAC03918.1	T-cell receptor beta chain [Homo sapiens]	19.3	67.9	0%	5722	83%
CAB51316.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	72.1	1%	5722	83%
1QE6_A	Chain A, Interleukin-8 With An Added Disulfide Between Residues 5 And 33 (L5cH33C) >pdb\|1QE6\|B Chain B, Interleukin-8 With An Added Disulfide Between Residues 5 And 33 (L5cH33C) >pdb\|1QE6\|C Chain C, Interleukin-8 With An Added Disulfide Between Residues 5 And 33 (L5cH33C) >pdb\|1QE6\|D Chain D, Interleukin-8 With An Added Disulfide Between Residues 5 And 33 (L5cH33C)	19.3	51.1	0%	5722	100%
CAC03933.1	T-cell receptor beta chain [Homo sapiens]	19.3	124	1%	5722	100%
CAC48313.1	T-cell receptor beta chain [Homo sapiens]	19.3	124	1%	5722	100%
CAB59351.1	TCR beta chain variable region [Homo sapiens]	19.3	69.6	0%	5722	83%
CAB46481.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	84.6	0%	5722	100%
CAC03825.1	T-cell receptor beta chain [Homo sapiens]	19.3	35.6	0%	5722	83%
Q8TDQ0.2	RecName: Full=Hepatitis A virus cellular receptor 2; Short=HAVcr-2; AltName: Full=T-cell immunoglobulin and mucin domain-containing protein 3; Short=TIMD-3; AltName: Full=T-cell membrane protein 3; AltName: Full=TIM-3; Flags: Precursor	19.3	282	3%	5722	85%
CAC03820.1	T-cell receptor beta chain [Homo sapiens]	19.3	123	1%	5722	100%
CAC03805.1	T-cell receptor beta chain [Homo sapiens]	19.3	71.3	0%	5722	100%
CAC03915.1	T-cell receptor beta chain [Homo sapiens]	19.3	107	1%	5722	100%
P16190.3	RecName: Full=HLA class I histocompatibility antigen, A-33 alpha chain; AltName: Full=MHC class I antigen A*33; AltName: Full=Aw-33; AltName: Full=Aw-19; Flags: Precursor	19.3	237	3%	5722	100%
NP_542141.1	short palate, lung and nasal epithelium carcinoma-associated protein 2 precursor [Homo sapiens]	19.3	277	3%	5722	100%
NP_004099.2	ficolin-2 isoform a precursor [Homo sapiens] >gb\|ABB01005.1\| ficolin-2 [Homo sapiens]	19.3	202	2%	5722	80%
CAB51294.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	89.7	1%	5722	100%
NP_945316.1	parathyroid hormone-related protein isoform 1 preproprotein [Homo sapiens] >ref\|NP_945317.1\| parathyroid hormone-related protein isoform 1 preproprotein [Homo sapiens]	19.3	100	1%	5722	100%
1HKL_H	Chain H, Free And Liganded Form Of An Esterolytic Catalytic Antibody	19.3	171	2%	5722	100%
CAC03861.1	T-cell receptor beta chain [Homo sapiens]	19.3	71.3	0%	5722	100%
1LK3_A	Chain A, Engineered Human Interleukin-10 Monomer Complexed To 9d7 Fab Fragment >pdb\|1LK3\|B Chain B, Engineered Human Interleukin-10 Monomer Complexed To 9d7 Fab Fragment	19.3	103	1%	5722	80%
CAC03891.1	T-cell receptor beta chain [Homo sapiens]	19.3	52.4	0%	5722	100%
P16189.2	RecName: Full=HLA class I histocompatibility antigen, A-31 alpha chain; AltName: Full=MHC class I antigen A*31; Flags: Precursor	19.3	256	3%	5722	100%
CAC03972.1	T-cell receptor beta chain [Homo sapiens]	19.3	103	1%	5722	100%
BAB71594.1	unnamed protein product [Homo sapiens] >gb\|EAW85621.1\| splA/ryanodine receptor domain and SOCS box containing 3, isoform CRA_c [Homo sapiens]	19.3	241	3%	5722	100%
AAS66629.1	cross-immune reaction antigen PCIA1 [Homo sapiens]	19.3	54.5	0%	5722	100%
CAC03981.1	T-cell receptor beta chain [Homo sapiens]	19.3	124	1%	5722	100%
1DEE_A	Chain A, Crystal Structure At 2.7a Resolution Of A Complex Between A Staphylococcus Aureus Domain And A Fab Fragment Of A Human Igm Antibody >pdb\|1DEE\|C Chain C, Crystal Structure At 2.7a Resolution Of A Complex Between A Staphylococcus Aureus Domain And A Fab Fragment Of A Human Igm Antibody >pdb\|1DEE\|E Chain E, Crystal Structure At 2.7a Resolution Of A Complex Between A Staphylococcus Aureus Domain And A Fab Fragment Of A Human Igm Antibody	19.3	207	2%	5722	100%
NP_291032.2	HLA class II histocompatibility antigen, DP alpha 1 chain precursor [Homo sapiens]	19.3	173	2%	5722	100%
CAC03943.1	T-cell receptor beta chain [Homo sapiens]	19.3	71.3	0%	5722	100%
Q86XR7.1	RecName: Full=TIR domain-containing adapter molecule 2; Short=TICAM-2; AltName: Full=TRIF-related adapter molecule; AltName: Full=Toll/interleukin-1 receptor domain-containing protein; AltName: Full=Toll-like receptor adaptor protein 3; AltName: Full=Putative NF-kappa-B-activating protein 502	19.3	255	3%	5722	100%
NP_758858.1	interleukin-4 isoform 2 precursor [Homo sapiens]	19.3	151	2%	5722	100%
1TZH_V	Chain V, Crystal Structure Of The Fab Yads1 Complexed With H-Vegf >pdb\|1TZH\|W Chain W, Crystal Structure Of The Fab Yads1 Complexed With H-Vegf >pdb\|1TZI\|V Chain V, Crystal Structure Of The Fab Yads2 Complexed With H-Vegf	19.3	134	1%	5722	100%
NP_476519.1	E3 ubiquitin-protein ligase rififylin [Homo sapiens] >ref\|NP_001017368.1\| E3 ubiquitin-protein ligase rififylin [Homo sapiens]	19.3	268	3%	5722	100%
CAC03963.1	T-cell receptor beta chain [Homo sapiens]	19.3	36.1	0%	5722	83%
NP_003329.1	ubiquitin-conjugating enzyme E2 D1 [Homo sapiens]	19.3	88.0	1%	5722	83%
NP_477515.2	ubiquitin-conjugating enzyme E2 J2 isoform 2 [Homo sapiens] >sp\|Q8N2K1.3\|UB2J2_HUMAN RecName: Full=Ubiquitin-conjugating enzyme E2 J2; AltName: Full=Non-canonical ubiquitin-conjugating enzyme 2; Short=NCUBE-2	19.3	155	3%	5722	100%
CAB59382.1	T cell receptor beta chain variable region [Homo sapiens]	19.3	38.2	0%	5722	71%
CAB51300.1	immunoglobulin kappa chain variable region [Homo sapiens]	19.3	52.0	1%	5722	57%
1IQD_B	Chain B, Human Factor Viii C2 Domain Complexed To Human Monoclonal Bo2c11 Fab	19.3	170	2%	5722	85%
CAB51311.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	72.1	1%	5722	83%
NP_001034750.1	toll/interleukin-1 receptor domain-containing adapter protein isoform a [Homo sapiens] >sp\|P58753.2\|TIRAP_HUMAN RecName: Full=Toll/interleukin-1 receptor domain-containing adapter protein; Short=TIR domain-containing adapter protein; AltName: Full=MyD88 adapter-like protein; AltName: Full=Adaptor protein Wyatt	19.3	252	4%	5722	83%
CAC03804.1	T-cell receptor beta chain [Homo sapiens]	19.3	107	1%	5722	100%
1B2W_L	Chain L, Comparison Of The Three-Dimensional Structures Of A Humanized And A Chimeric Fab Of An Anti-Gamma-Interferon Antibody >pdb\|1T04\|A Chain A, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma Fab In C2 Space Group >pdb\|1T04\|C Chain C, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma Fab In C2 Space Group >pdb\|1T3F\|A Chain A, Three Dimensional Structure Of A Humanized Anti-Ifn-Gamma Fab (Huzaf) In P21 21 21 Space Group	19.3	209	3%	5722	100%
CAC29069.1	immunoglobulin lambda light chain variable region [Homo sapiens]	19.3	101	1%	5722	83%
1JE4_A	Chain A, Solution Structure Of The Monomeric Variant Of The Chemokine Mip-1beta	19.3	69.1	0%	5722	83%
CAB46478.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	87.6	1%	5722	66%
CAC03942.1	T-cell receptor beta chain [Homo sapiens]	19.3	35.2	0%	5722	83%
NP_005185.2	CCAAT/enhancer-binding protein beta [Homo sapiens] >sp\|P17676.2\|CEBPB_HUMAN RecName: Full=CCAAT/enhancer-binding protein beta; Short=C/EBP beta; AltName: Full=Liver activator protein; AltName: Full=Nuclear factor NF-IL6; AltName: Full=Transcription factor 5; Short=TCF-5	19.3	305	4%	5722	83%
CAC03824.1	T-cell receptor beta chain [Homo sapiens]	19.3	90.6	0%	5722	100%
1FL6_H	Chain H, The Hapten Complexed Germline Precursor To Sulfide Oxidase Catalytic Antibody 28b4 >pdb\|1FL6\|B Chain B, The Hapten Complexed Germline Precursor To Sulfide Oxidase Catalytic Antibody 28b4 >pdb\|1FL5\|H Chain H, The Unliganded Germline Precursor To The Sulfide Oxidase Catalytic Antibody 28b4. >pdb\|1FL5\|B Chain B, The Unliganded Germline Precursor To The Sulfide Oxidase Catalytic Antibody 28b4.	19.3	188	2%	5722	100%
1KGC_E	Chain E, Immune Receptor	19.3	122	1%	5722	83%
CAC03938.1	T-cell receptor beta chain [Homo sapiens]	19.3	90.6	0%	5722	100%
3KFD_A	Chain A, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|B Chain B, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|C Chain C, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily >pdb\|3KFD\|D Chain D, Ternary Complex Of Tgf-B1 Reveals Isoform-Specific Ligand Re And Receptor Recruitment In The Superfamily	19.3	68.3	0%	5722	100%
CAB51709.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	103	1%	5722	83%
CAC03779.1	T-cell receptor beta chain [Homo sapiens]	19.3	71.3	0%	5722	100%
NP_056196.2	family with sequence similarity 19 (chemokine (C-C motif)-like), member A5 isoform 2 [Homo sapiens]	19.3	86.8	1%	5722	100%
1JPS_H	Chain H, Crystal Structure Of Tissue Factor In Complex With Humanized Fab D3h44 >pdb\|1JPT\|H Chain H, Crystal Structure Of Fab D3h44	19.3	182	3%	5722	100%
NP_004080.2	TSC22 domain family protein 3 isoform 2 [Homo sapiens]	19.3	119	1%	5722	100%
P43308.1	RecName: Full=Translocon-associated protein subunit beta; Short=TRAP-beta; AltName: Full=Signal sequence receptor subunit beta; Short=SSR-beta; Flags: Precursor	19.3	153	2%	5722	83%
3INK_C	Chain C, Unraveling The Structure Of Interleukin-2: Reply >pdb\|3INK\|D Chain D, Unraveling The Structure Of Interleukin-2: Reply >pdb\|2ERJ\|D Chain D, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2 >pdb\|2ERJ\|H Chain H, Crystal Structure Of The Heterotrimeric Interleukin-2 Receptor In Complex With Interleukin-2	19.3	103	1%	5722	100%
NP_079103.2	histone deacetylase 11 isoform 1 [Homo sapiens]	19.3	274	4%	5722	83%
CAC03951.1	T-cell receptor beta chain [Homo sapiens]	19.3	71.3	0%	5722	100%
CAB46456.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	50.3	0%	5722	72%
CAC03899.1	T-cell receptor beta chain [Homo sapiens]	19.3	19.3	0%	5722	83%
P10746.1	RecName: Full=Uroporphyrinogen-III synthase; Short=UROIIIS; Short=UROS; AltName: Full=Hydroxymethylbilane hydrolyase [cyclizing]; AltName: Full=Uroporphyrinogen-III cosynthase	19.3	341	4%	5722	100%
NP_004917.2	butyrate response factor 1 [Homo sapiens]	19.3	247	3%	5722	100%
P02747.3	RecName: Full=Complement C1q subcomponent subunit C; Flags: Precursor	19.3	282	4%	5722	100%
CAC28911.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	19.3	116	1%	5722	66%
P10314.2	RecName: Full=HLA class I histocompatibility antigen, A-32 alpha chain; AltName: Full=MHC class I antigen A*32; Flags: Precursor	19.3	256	3%	5722	100%
CAC03783.1	T-cell receptor beta chain [Homo sapiens]	19.3	107	1%	5722	100%
CAB51724.1	immunoglobulin heavy chain variable region [Homo sapiens]	19.3	52.0	0%	5722	100%
CAC03802.1	T-cell receptor beta chain [Homo sapiens]	19.3	107	1%	5722	100%
CAC03886.1	T-cell receptor beta chain [Homo sapiens]	19.3	90.6	1%	5722	100%
NP_009171.1	dual specificity protein phosphatase 12 [Homo sapiens]	19.3	242	3%	5722	100%
P15374.1	RecName: Full=Ubiquitin carboxyl-terminal hydrolase isozyme L3; Short=UCH-L3; AltName: Full=Ubiquitin thioesterase L3	19.3	202	2%	5722	100%
CAC03785.1	T-cell receptor beta chain [Homo sapiens]	19.3	107	1%	5722	100%
CAB48537.1	immunoglobulin light chain variable region [Homo sapiens] >emb\|CAB48540.1\| immunoglobulin light chain variable region [Homo sapiens] >emb\|CAB50703.1\| immunoglobulin light chain variable region [Homo sapiens]	19.3	140	2%	5722	83%
P30459.1	RecName: Full=HLA class I histocompatibility antigen, A-74 alpha chain; AltName: Full=MHC class I antigen A*74; AltName: Full=Aw-74; AltName: Full=Aw-19; Flags: Precursor	19.3	271	4%	5722	100%
CAD68160.1	immunoglobulin light chain variable region [Homo sapiens]	19.3	156	2%	5722	100%
NP_932170.1	T-cell surface glycoprotein CD3 zeta chain isoform 1 precursor [Homo sapiens]	19.3	137	1%	5722	100%
CAC03868.1	T-cell receptor beta chain [Homo sapiens]	19.3	57.1	0%	5722	85%
CAB51317.1	immunoglobulin lambda chain variable region [Homo sapiens]	19.3	51.5	0%	5722	83%
1KCG_A	Chain A, Nkg2d In Complex With Ulbp3 >pdb\|1KCG\|B Chain B, Nkg2d In Complex With Ulbp3	19.3	135	1%	5722	100%
NP_001015881.1	TSC22 domain family protein 3 isoform 3 [Homo sapiens]	19.3	102	1%	5722	100%
CAB62907.2	human leukocyte antigen class I [Homo sapiens]	19.3	67.5	1%	5722	100%
Q99836.1	RecName: Full=Myeloid differentiation primary response protein MyD88	19.3	269	4%	5722	100%
NP_004820.1	natural cytotoxicity triggering receptor 1 isoform a [Homo sapiens]	19.3	355	4%	5722	100%
NP_612141.1	interleukin-17D precursor [Homo sapiens]	19.3	116	1%	5722	83%
CAD45088.1	T-cell receptor beta chain [Homo sapiens]	19.3	122	1%	5722	83%
NP_002925.1	non-secretory ribonuclease precursor [Homo sapiens]	19.3	200	2%	5722	83%
P08236.2	RecName: Full=Beta-glucuronidase; AltName: Full=Beta-G1; Flags: Precursor	19.3	534	7%	5722	100%
NP_001017964.1	YdjC homolog [Homo sapiens]	18.5	236	2%	6189	100%
3BT1_U	Chain U, Structure Of Urokinase Receptor, Urokinase And Vitronectin Complex >pdb\|3BT2\|U Chain U, Structure Of Urokinase Receptor, Urokinase And Vitronectin Complex	18.9	115	1%	6443	80%
2FD6_U	Chain U, Structure Of Human Urokinase Plasminogen Activator In Complex With Urokinase Receptor And An Anti-Upar Antibody At 1.9 A	18.9	115	1%	6486	80%
3KR3_L	Chain L, Crystal Structure Of Igf-Ii Antibody Complex	18.9	295	3%	7678	100%
3KWW_A	Chain A, Crystal Structure Of The 'restriction Triad' Mutant Of Hla B Beta-2-Microglobulin And Ebv Peptide	18.9	134	1%	7678	100%
3MFF_B	Chain B, 1f1e8hu Tcr >pdb\|3MFF\|D Chain D, 1f1e8hu Tcr	18.9	173	2%	7678	83%
3L6F_B	Chain B, Structure Of Mhc Class Ii Molecule Hla-Dr1 Complexed With Phosphopeptide Mart-1	18.9	200	2%	7678	100%
3L5Y_L	Chain L, Crystal Structure Of The Complex Between Il-13 And M1295 Fab	18.9	234	3%	7678	100%
3L5X_L	Chain L, Crystal Structure Of The Complex Between Il-13 And H2l6 Fab	18.9	234	3%	7678	100%
2IC4_A	Chain A, Solution Structure Of The His402 Allotype Of The Factor H Scr6-Scr7-Scr8 Fragment	18.9	168	1%	7678	100%
2KQM_A	Chain A, Solution Structure Of The Ki O18O8 Y87H IMMUNOGLOBULIN LIGH Variable Domain >pdb\|2KQM\|B Chain B, Solution Structure Of The Ki O18O8 Y87H IMMUNOGLOBULIN LIGH Variable Domain	18.9	155	3%	7678	100%
3L9J_T	Chain T, Selection Of A Novel Highly Specific Tnfalpha Antagonist: Insight From The Crystal Structure Of The Antagonist- Tnfalpha Complex	18.9	84.6	1%	7678	100%
3H9S_E	Chain E, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Bound Tel1p Peptide	18.9	153	2%	7678	100%
3FPU_B	Chain B, The Crystallographic Structure Of The Complex Between Evasin-1 And Ccl3	18.9	53.2	1%	7678	83%
3IT8_A	Chain A, Crystal Structure Of Tnf Alpha Complexed With A Poxvirus Mhc-Related Tnf Binding Protein >pdb\|3IT8\|B Chain B, Crystal Structure Of Tnf Alpha Complexed With A Poxvirus Mhc-Related Tnf Binding Protein >pdb\|3IT8\|C Chain C, Crystal Structure Of Tnf Alpha Complexed With A Poxvirus Mhc-Related Tnf Binding Protein >pdb\|3IT8\|G Chain G, Crystal Structure Of Tnf Alpha Complexed With A Poxvirus Mhc-Related Tnf Binding Protein >pdb\|3IT8\|H Chain H, Crystal Structure Of Tnf Alpha Complexed With A Poxvirus Mhc-Related Tnf Binding Protein >pdb\|3IT8\|I Chain I, Crystal Structure Of Tnf Alpha Complexed With A Poxvirus Mhc-Related Tnf Binding Protein	18.9	116	1%	7678	100%
3H8N_A	Chain A, Crystal Structure Analysis Of Kir2ds4	18.9	231	3%	7678	100%
ACX46982.1	toll-like receptor 4 [Homo sapiens]	18.9	123	1%	7678	83%
ACX46981.1	toll-like receptor 4 [Homo sapiens]	18.9	123	1%	7678	83%
ACX46980.1	toll-like receptor 4 [Homo sapiens] >gb\|ACX46983.1\| toll-like receptor 4 [Homo sapiens] >gb\|ACX46984.1\| toll-like receptor 4 [Homo sapiens]	18.9	140	2%	7678	83%
ACN63267.1	B cell antibody heavy chain variable region [Homo sapiens]	18.9	67.5	0%	7678	100%
ACN63259.1	B cell antibody heavy chain variable region [Homo sapiens]	18.9	67.5	0%	7678	100%
ACN63254.1	B cell antibody heavy chain variable region [Homo sapiens]	18.9	50.3	0%	7678	66%
ACN63210.1	B cell antibody heavy chain variable region [Homo sapiens]	18.9	67.9	1%	7678	85%
ACN63208.1	B cell antibody heavy chain variable region [Homo sapiens]	18.9	101	1%	7678	85%
ACN63206.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63222.1\| B cell antibody heavy chain variable region [Homo sapiens]	18.9	101	1%	7678	85%
ACN63203.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63204.1\| B cell antibody heavy chain variable region [Homo sapiens]	18.9	118	1%	7678	100%
3F12_A	Chain A, Germline V-Genes Sculpt The Binding Site Of A Family Of Antibodies Neutralizing Human Cytomegalovirus >pdb\|3F12\|C Chain C, Germline V-Genes Sculpt The Binding Site Of A Family Of Antibodies Neutralizing Human Cytomegalovirus	18.9	251	4%	7678	100%
3HC3_L	Chain L, Bha10 Igg1 Fab Double Mutant Variant - Antibody Directed At Human Ltbr >pdb\|3HC4\|L Chain L, Bha10 Igg1 Fab Quadruple Mutant Variant - Antibody Directed At Human Ltbr	18.9	222	3%	7678	100%
3HC0_L	Chain L, Bha10 Igg1 Wild-Type Fab - Antibody Directed At Human Ltbr >pdb\|3HC0\|B Chain B, Bha10 Igg1 Wild-Type Fab - Antibody Directed At Human Ltbr	18.9	205	2%	7678	100%
3FN0_L	Chain L, Crystal Structure Of Hiv-1 Neutralizing Human Fab Z13e1 In Complex With A 12-Residue Peptide Containing The Z13e1 Epitope On Gp41	18.9	269	4%	7678	100%
2WCE_A	Chain A, Calcium-Free (Apo) S100a12 >pdb\|2WCE\|B Chain B, Calcium-Free (Apo) S100a12	18.9	49.8	0%	7678	62%
CAZ15556.1	killer cell immunoglobulin-like receptor, two domains, short cytoplasmic tail, 5 [Homo sapiens]	18.9	281	3%	7678	100%
3HCT_B	Chain B, Crystal Structure Of Traf6 In Complex With Ubc13 In The P1 Space Group >pdb\|3HCU\|B Chain B, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2 Space Group >pdb\|3HCU\|D Chain D, Crystal Structure Of Traf6 In Complex With Ubc13 In The C2 Space Group	18.9	104	1%	7678	83%
3GIZ_L	Chain L, Crystal Structure Of The Fab Fragment Of Anti-Cd20 Antibody Ofatumumab	18.9	251	4%	7678	100%
2WBJ_B	Chain B, Tcr Complex >pdb\|2WBJ\|F Chain F, Tcr Complex	18.9	230	3%	7678	100%
3EQT_A	Chain A, Crystal Structure Of Human Lgp2 C-Terminal Domain In Complex With Dsrna >pdb\|3EQT\|B Chain B, Crystal Structure Of Human Lgp2 C-Terminal Domain In Complex With Dsrna	18.9	221	3%	7678	80%
2W80_A	Chain A, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H >pdb\|2W80\|B Chain B, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H >pdb\|2W80\|E Chain E, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H >pdb\|2W80\|G Chain G, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H >pdb\|2W81\|A Chain A, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H >pdb\|2W81\|B Chain B, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H >pdb\|2W81\|E Chain E, Structure Of A Complex Between Neisseria Meningitidis Factor H Binding Protein And Ccps 6-7 Of Human Complement Factor H	18.9	135	1%	7678	100%
ACJ37288.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.9	123	3%	7678	83%
ACJ37287.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.9	84.2	1%	7678	85%
ACJ37277.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.9	117	1%	7678	85%
ACJ37271.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.9	115	1%	7678	100%
ACJ37270.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.9	69.1	1%	7678	80%
ACJ37253.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	18.9	53.2	1%	7678	83%
2W4R_A	Chain A, Crystal Structure Of The Regulatory Domain Of Human Lgp2 >pdb\|2W4R\|B Chain B, Crystal Structure Of The Regulatory Domain Of Human Lgp2 >pdb\|2W4R\|C Chain C, Crystal Structure Of The Regulatory Domain Of Human Lgp2 >pdb\|2W4R\|D Chain D, Crystal Structure Of The Regulatory Domain Of Human Lgp2	18.9	221	3%	7678	80%
3EYQ_C	Chain C, Crystal Structure Of Mj5 Fab, A Germline Antibody Variant Of Anti-Human Cytomegalovirus Antibody 8f9	18.9	268	4%	7678	100%
3EYF_A	Chain A, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9 Plus Gb Peptide >pdb\|3EYF\|C Chain C, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9 Plus Gb Peptide >pdb\|3EYO\|A Chain A, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9 >pdb\|3EYO\|C Chain C, Crystal Structure Of Anti-Human Cytomegalovirus Antibody 8f9	18.9	222	3%	7678	100%
3ERY_A	Chain A, Different Thermodynamic Binding Mechanisms And Peptide Fine Specificities Associated With A Panel Of Structurally Similar High-Affinity T Cell Receptors >pdb\|3ERY\|B Chain B, Different Thermodynamic Binding Mechanisms And Peptide Fine Specificities Associated With A Panel Of Structurally Similar High-Affinity T Cell Receptors	18.9	103	1%	7678	100%
2VYR_E	Chain E, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|F Chain F, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|G Chain G, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|H Chain H, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|I Chain I, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|J Chain J, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|K Chain K, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody >pdb\|2VYR\|L Chain L, Structure Of Human Mdm4 N-Terminal Domain Bound To A Single Domain Antibody	18.9	136	2%	7678	80%
3D85_C	Chain C, Crystal Structure Of Il-23 In Complex With Neutralizing Fab	18.9	107	1%	7678	83%
3D85_A	Chain A, Crystal Structure Of Il-23 In Complex With Neutralizing Fab	18.9	219	3%	7678	100%
3CDF_A	Chain A, Ki O18O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN >pdb\|3CDF\|B Chain B, Ki O18O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN >pdb\|3CDF\|C Chain C, Ki O18O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN >pdb\|3CDF\|D Chain D, Ki O18O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN >pdb\|3CDF\|E Chain E, Ki O18O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN >pdb\|3CDF\|F Chain F, Ki O18O8 Y87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE DOMAIN	18.9	155	3%	7678	100%
3CDC_A	Chain A, Ki O18O8 N34IY87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE Domain >pdb\|3CDC\|B Chain B, Ki O18O8 N34IY87H IMMUNOGLOBULIN LIGHT CHAIN VARIABLE Domain	18.9	137	2%	7678	100%
CAR63052.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	34.4	0%	7678	80%
CAR63003.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	83.8	1%	7678	83%
CAR62978.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	55.8	0%	7678	100%
CAR62969.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	154	2%	7678	83%
CAR62960.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	70.4	1%	7678	83%
CAR62948.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	104	1%	7678	100%
CAR62946.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	87.2	1%	7678	83%
CAR62944.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	68.3	0%	7678	80%
CAR62940.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	69.1	1%	7678	83%
CAR62939.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	52.8	0%	7678	83%
CAR62924.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	51.5	0%	7678	100%
CAR62872.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	117	1%	7678	100%
CAR62856.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	133	1%	7678	83%
CAR62829.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	50.3	0%	7678	66%
CAR62813.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	85.5	1%	7678	100%
CAR62781.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	34.4	0%	7678	66%
CAR62779.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	137	2%	7678	100%
CAR62775.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	138	1%	7678	100%
CAR62773.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	102	1%	7678	100%
CAR62758.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	49.8	0%	7678	100%
CAR62753.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	117	1%	7678	83%
CAR62749.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	54.5	0%	7678	100%
CAR62704.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	35.6	0%	7678	83%
CAR62694.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.9	82.9	1%	7678	66%
CAR62685.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.9	70.4	1%	7678	80%
CAR62652.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	82.5	1%	7678	83%
CAR62627.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	98.0	1%	7678	100%
CAR62624.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	90.6	1%	7678	100%
CAR62623.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	106	1%	7678	100%
CAR62622.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	154	1%	7678	100%
CAR62592.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	52.0	0%	7678	80%
CAR62583.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	102	1%	7678	83%
CAR62582.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	102	1%	7678	83%
CAR62581.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	68.7	1%	7678	80%
CAR62557.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	162	1%	7678	100%
CAR62547.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	87.6	1%	7678	100%
3DUH_C	Chain C, Structure Of Interleukin-23 >pdb\|3DUH\|D Chain D, Structure Of Interleukin-23	18.9	109	1%	7678	83%
AAL04515.2	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	18.9	106	1%	7678	100%
3B2V_A	Chain A, Crystal Structure Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8	18.9	470	7%	7678	100%
3B2U_L	Chain L, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|D Chain D, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|G Chain G, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|K Chain K, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|O Chain O, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|R Chain R, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|U Chain U, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|X Chain X, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2V\|L Chain L, Crystal Structure Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8	18.9	268	3%	7678	100%
2JG8_B	Chain B, Crystallographic Structure Of Human C1q Globular Heads Complexed To Phosphatidyl-Serine >pdb\|2JG8\|E Chain E, Crystallographic Structure Of Human C1q Globular Heads Complexed To Phosphatidyl-Serine >pdb\|2JG9\|B Chain B, Crystallographic Structure Of Human C1q Globular Heads (P1) >pdb\|2JG9\|E Chain E, Crystallographic Structure Of Human C1q Globular Heads (P1) >pdb\|2WNU\|B Chain B, Complex Between C1q Globular Heads And Heparan Sulfate >pdb\|2WNU\|E Chain E, Complex Between C1q Globular Heads And Heparan Sulfate >pdb\|2WNV\|B Chain B, Complex Between C1q Globular Heads And Deoxyribose >pdb\|2WNV\|E Chain E, Complex Between C1q Globular Heads And Deoxyribose	18.9	119	1%	7678	100%
2QSC_L	Chain L, Crystal Structure Analysis Of Anti-Hiv-1 V3-Fab F425-B4e8 In Complex With A V3-Peptide	18.9	224	3%	7678	100%
3LU9_A	Chain A, Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1 >pdb\|3LU9\|D Chain D, Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1	18.9	68.3	0%	7678	100%
1GKN_A	Chain A, Structure Determination And Rational Mutagenesis Reveal Binding Surface Of Immune Adherence Receptor, Cr1 (Cd35)	18.9	137	1%	7678	100%
2V8E_A	Chain A, Crystal Structure Of Human Complement Factor H, Scr Domains 6-8 (H402 Risk Variant), In Complex With Ligand	18.9	152	1%	7678	100%
2UWN_A	Chain A, Crystal Structure Of Human Complement Factor H, Scr Domains 6-8 (H402 Risk Variant), In Complex With Ligand	18.9	168	1%	7678	100%
2Q6W_B	Chain B, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound Platelet Integrin Peptide Associated With Fetal And Neonatal Alloimmune Thrombocytopenia >pdb\|2Q6W\|E Chain E, The Structure Of Hla-Dra, Drb30101 (Dr52a) With Bound Platelet Integrin Peptide Associated With Fetal And Neonatal Alloimmune Thrombocytopenia	18.9	221	3%	7678	100%
2D8S_A	Chain A, Solution Structure Of The Ring Domain Of The Human Cellular Modulator Of Immune Recognition Protein	18.9	53.2	0%	7678	83%
2NW2_B	Chain B, Crystal Structure Of Els4 Tcr At 1.4a >pdb\|2NX5\|E Chain E, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|J Chain J, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|P Chain P, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|U Chain U, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a	18.9	252	2%	7678	83%
2D7T_H	Chain H, Crystal Structure Of Human Anti Polyhydroxybutyrate Antibody Fv	18.9	66.6	0%	7678	85%
NP_001171985.1	claudin-11 isoform 2 [Homo sapiens]	18.9	100	1%	7678	100%
NP_001159717.1	heparanase-2 isoform 3 [Homo sapiens]	18.9	330	3%	7678	100%
ABG38429.1	immunglobulin heavy chain variable region [Homo sapiens]	18.9	101	1%	7678	100%
ABG38408.1	immunoglobulin light chain variable region [Homo sapiens] >gb\|ABG38409.1\| immunoglobulin light chain variable region [Homo sapiens]	18.9	99.3	1%	7678	100%
ABG38416.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	70.4	1%	7678	100%
ABG38417.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	86.8	1%	7678	100%
ABG38342.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	133	1%	7678	100%
ABG38349.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	166	2%	7678	100%
ABG38336.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	84.2	1%	7678	80%
ABG38350.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	167	2%	7678	100%
ABG38381.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	68.7	0%	7678	100%
ABG38377.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	99.3	1%	7678	80%
ABG38361.1	immunoglobulin light chain variable region [Homo sapiens] >gb\|ABG38362.1\| immunoglobulin light chain variable region [Homo sapiens]	18.9	115	1%	7678	100%
ABG38352.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	167	2%	7678	100%
CAJ90634.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	35.2	0%	7678	66%
NP_001027903.1	2'-5'-oligoadenylate synthase 2 isoform 3 [Homo sapiens]	18.9	69.6	1%	7678	100%
NP_922941.1	C-type lectin domain family 7 member A isoform e [Homo sapiens]	18.9	267	4%	7678	100%
NP_001152869.1	Fc receptor-like protein 1 isoform 2 precursor [Homo sapiens]	18.9	420	6%	7678	83%
NP_064514.1	placental protein 13-like isoform 1 [Homo sapiens] >gb\|ACR09643.1\| galectin-14 precursor transcription variant 1 [Homo sapiens]	18.9	85.9	1%	7678	80%
Q9Y2Y1.2	RecName: Full=DNA-directed RNA polymerase III subunit RPC10; Short=RNA polymerase III subunit C10; AltName: Full=DNA-directed RNA polymerase III subunit K; AltName: Full=RNA polymerase III subunit C11; Short=RPC11; Short=HsC11p; Short=hRPC11; AltName: Full=RNA polymerase III 12.5 kDa subunit; Short=RPC12.5	18.9	67.0	0%	7678	80%
NP_776171.1	tetratricopeptide repeat protein 9C [Homo sapiens]	18.9	166	1%	7678	100%
P02746.3	RecName: Full=Complement C1q subcomponent subunit B; Flags: Precursor	18.9	188	2%	7678	100%
1M7L_A	Chain A, Solution Structure Of The Coiled-Coil Trimerization Domain From Lung Surfactant Protein D >pdb\|1M7L\|B Chain B, Solution Structure Of The Coiled-Coil Trimerization Domain From Lung Surfactant Protein D >pdb\|1M7L\|C Chain C, Solution Structure Of The Coiled-Coil Trimerization Domain From Lung Surfactant Protein D	18.9	18.9	0%	7678	71%
NP_001107645.1	dipeptidyl peptidase 1 isoform c precursor [Homo sapiens]	18.9	84.6	1%	7678	83%
AAP44472.1	PNPase [Homo sapiens]	18.9	167	2%	7678	100%
AAF20061.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	83.4	1%	7678	83%
AAC41992.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	18.9	133	2%	7678	80%
AAF20058.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	67.0	0%	7678	83%
AAF20062.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	67.0	0%	7678	83%
AAC41983.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	18.9	137	2%	7678	100%
AAF20057.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	67.0	0%	7678	83%
AAF20059.1	immunoglobulin lambda light chain variable region [Homo sapiens] >gb\|AAF20060.1\|AF188827_1 immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	84.6	1%	7678	83%
AAC41989.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	18.9	134	2%	7678	80%
NP_079083.2	trem-like transcript 2 protein precursor [Homo sapiens] >sp\|Q5T2D2.2\|TRML2_HUMAN RecName: Full=Trem-like transcript 2 protein; Short=TLT-2; AltName: Full=Triggering receptor expressed on myeloid cells-like protein 2; Flags: Precursor	18.9	285	4%	7678	100%
AAF20063.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	67.0	0%	7678	83%
AAC41991.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	18.9	133	1%	7678	100%
AAC61609.1	immunoglobulin variable region used by the ITC63B heavy chain (subgroup VH5) (anti-cytomeglovirus glycoprotein B (AD-1 epitope) [Homo sapiens]	18.9	103	1%	7678	85%
AAY57134.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	85.5	1%	7678	100%
AAY57160.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	85.1	1%	7678	71%
AAY57132.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	100	1%	7678	100%
AAY57074.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	70.0	1%	7678	66%
AAY57080.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	85.5	1%	7678	100%
AAY33466.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	119	2%	7678	100%
AAY33474.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	104	1%	7678	100%
AAY33427.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	104	1%	7678	100%
AAY33418.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	103	1%	7678	83%
AAY33403.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	104	1%	7678	100%
AAY33445.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	118	1%	7678	100%
AAY33415.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	103	1%	7678	66%
AAY33394.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	85.1	1%	7678	100%
AAY33456.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	69.1	0%	7678	83%
AAY33417.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	99.7	1%	7678	83%
AAY33421.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	100	1%	7678	100%
AAY33372.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	85.5	1%	7678	83%
AAY33373.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	103	1%	7678	83%
AAY33363.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	82.9	1%	7678	83%
AAY33370.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	88.0	1%	7678	100%
AAY33344.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	90.1	1%	7678	100%
AAY33329.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.9	85.5	1%	7678	100%
AAY33384.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.9	103	1%	7678	85%
AAY16624.1	immunoglobulin kappa light chain [Homo sapiens]	18.9	150	2%	7678	80%
AAY16626.1	immunoglobulin kappa light chain [Homo sapiens]	18.9	101	1%	7678	80%
AAY16599.1	immunoglobulin kappa light chain [Homo sapiens]	18.9	133	2%	7678	80%
AAY16616.1	immunoglobulin kappa light chain [Homo sapiens]	18.9	150	2%	7678	80%
AAY16597.1	immunoglobulin kappa light chain [Homo sapiens]	18.9	184	2%	7678	100%
AAY16619.1	immunoglobulin kappa light chain [Homo sapiens]	18.9	132	1%	7678	100%
NP_689521.1	recQ-mediated genome instability protein 2 [Homo sapiens]	18.9	86.3	1%	7678	83%
NP_680475.1	dipeptidyl peptidase 1 isoform b precursor [Homo sapiens]	18.9	67.0	1%	7678	83%
AAB20502.1	T-cell receptor V beta 3, TCR Vbeta3 [human, 1013-2 synovial T cells, Peptide Partial, 15 aa]	18.9	18.9	0%	7678	71%
AAB20516.1	T-cell receptor V beta 14, TCR Vbeta14 [human, 1020-6 synovial T cells, Peptide Partial, 17 aa]	18.9	34.8	0%	7678	100%
AAB50749.1	T-cell receptor V3J2S1 beta chain [human, CD4-CD57+ large granular lymphocytes, patient REFE R3 isolate, Peptide Partial, 22 aa]	18.9	18.9	0%	7678	42%
1ZGL_B	Chain B, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|E Chain E, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|H Chain H, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a >pdb\|1ZGL\|K Chain K, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a	18.9	199	2%	7678	100%
1ZA3_R	Chain R, The Crystal Structure Of The Ysd1 Fab Bound To Dr5 >pdb\|1ZA3\|S Chain S, The Crystal Structure Of The Ysd1 Fab Bound To Dr5	18.9	204	3%	7678	100%
1ZHL_A	Chain A, Crystal Structure Of Hla-B3508 Presenting 13-Mer Ebv Antigen Lpeplpqgqltay >pdb\|2AK4\|A Chain A, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|F Chain F, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|K Chain K, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AK4\|Q Chain Q, Crystal Structure Of Sb27 Tcr In Complex With Hla-B3508- 13mer Peptide >pdb\|2AXF\|A Chain A, The Immunogenicity Of A Viral Cytotoxic T Cell Epitope Is Controlled By Its Mhc-Bound Conformation >pdb\|2FZ3\|A Chain A, The Role Of T Cell Receptor Alpha Genes In Directing Human Mhc Restriction >pdb\|2NW3\|A Chain A, Crystal Structure Of Hla-B3508 Presenting Ebv Peptide Eplpqgqltay At 1.7a >pdb\|3BW9\|A Chain A, Crystal Structure Of Hla B3508 In Complex With A Hcmv 12- Mer Peptide From The Pp65 Protein >pdb\|3BWA\|A Chain A, Crystal Structure Of Hla B3508 In Complex With A Hcmv 8- Mer Peptide From The Pp65 Protein	18.9	149	2%	7678	100%
1YMM_B	Chain B, TcrHLA-Dr2bMBP-Peptide Complex	18.9	214	3%	7678	100%
1YY9_A	Chain A, Structure Of The Extracellular Domain Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of CetuximabERBITUXIMC-C225	18.9	470	7%	7678	100%
1XH3_A	Chain A, Conformational Restraints And Flexibility Of 14-Meric Peptides In Complex With Hla-B3501 >pdb\|1ZHK\|A Chain A, Crystal Structure Of Hla-B3501 Presenting 13-Mer Ebv Antigen Lpeplpqgqltay >pdb\|1ZSD\|A Chain A, Crystal Structure Of Hla-B3501 Presenting An 11-Mer Ebv Antigen Eplpqgqltay >pdb\|2AXG\|A Chain A, The Immunogenicity Of A Viral Cytotoxic T Cell Epitope Is Controlled By Its Mhc-Bound Conformation >pdb\|2H6P\|A Chain A, Crystal Structure Of Hla-B3501 Presenting The Human Cytochrome P450 Derived Peptide, Kpivvlhgy >pdb\|2FYY\|A Chain A, The Role Of T Cell Receptor Alpha Genes In Directing Human Mhc Restriction >pdb\|2NX5\|A Chain A, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|F Chain F, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|K Chain K, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|2NX5\|Q Chain Q, Crystal Structure Of Els4 Tcr Bound To Hla-B3501 Presenting Peptide Eplpqgqltay At 1.7a >pdb\|3MV7\|A Chain A, Crystal Structure Of The Tk3 Tcr In Complex With Hla-B3501 >pdb\|3MV8\|A Chain A, Crystal Structure Of The Tk3-Gln55his Tcr In Complex With Hl B3501HPVG >pdb\|3MV9\|A Chain A, Crystal Structure Of The Tk3-Gln55ala Tcr In Complex With Hl B3501HPVG >pdb\|3LKN\|A Chain A, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1918 Strain >pdb\|3LKO\|A Chain A, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1934 Strain >pdb\|3LKP\|A Chain A, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1972 Strain >pdb\|3LKQ\|A Chain A, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1977 Strain >pdb\|3LKR\|A Chain A, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 2009 H1n1 Swine Origin Strain >pdb\|3LKS\|A Chain A, Crystal Structure Of Hla B3501 In Complex With Influenza Np418 Epitope From 1980 Strain	18.9	149	2%	7678	100%
CAE54359.1	immunoglobulin light chain [Homo sapiens]	18.9	140	2%	7678	100%
CAE54363.1	immunoglobulin light chain [Homo sapiens]	18.9	88.5	1%	7678	100%
CAE54366.1	immunoglobulin light chain [Homo sapiens]	18.9	87.6	1%	7678	80%
CAE54360.1	immunoglobulin light chain [Homo sapiens]	18.9	140	2%	7678	100%
CAE54362.1	immunoglobulin light chain [Homo sapiens]	18.9	103	1%	7678	100%
CAE54364.1	immunoglobulin light chain [Homo sapiens]	18.9	88.5	1%	7678	100%
1V7N_V	Chain V, Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody Tn1 Fab >pdb\|1V7N\|X Chain X, Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody Tn1 Fab >pdb\|1V7N\|Y Chain Y, Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody Tn1 Fab >pdb\|1V7N\|Z Chain Z, Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody Tn1 Fab	18.9	137	2%	7678	83%
1V7M_V	Chain V, Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody Tn1 Fab >pdb\|1V7M\|X Chain X, Human Thrombopoietin Functional Domain Complexed To Neutralizing Antibody Tn1 Fab	18.9	137	2%	7678	83%
1PK6_B	Chain B, Globular Head Of The Complement System Protein C1q	18.9	119	1%	7678	100%
1PW9_A	Chain A, High Resolution Crystal Structure Of An Active Recombinant Fragment Of Human Lung Surfactant Protein D >pdb\|1PW9\|B Chain B, High Resolution Crystal Structure Of An Active Recombinant Fragment Of Human Lung Surfactant Protein D >pdb\|1PW9\|C Chain C, High Resolution Crystal Structure Of An Active Recombinant Fragment Of Human Lung Surfactant Protein D >pdb\|1PWB\|A Chain A, High Resolution Crystal Structure Of An Active Recombinant Fragment Of Human Lung Surfactant Protein D With Maltose >pdb\|1PWB\|B Chain B, High Resolution Crystal Structure Of An Active Recombinant Fragment Of Human Lung Surfactant Protein D With Maltose >pdb\|1PWB\|C Chain C, High Resolution Crystal Structure Of An Active Recombinant Fragment Of Human Lung Surfactant Protein D With Maltose >pdb\|3IKN\|A Chain A, Crystal Structure Of Galactose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKN\|B Chain B, Crystal Structure Of Galactose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKN\|C Chain C, Crystal Structure Of Galactose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKP\|A Chain A, Crystal Structure Of Inositol Phosphate Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKP\|B Chain B, Crystal Structure Of Inositol Phosphate Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKP\|C Chain C, Crystal Structure Of Inositol Phosphate Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKQ\|A Chain A, Crystal Structure Of Alpha 1-2 Mannobiose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKQ\|B Chain B, Crystal Structure Of Alpha 1-2 Mannobiose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKQ\|C Chain C, Crystal Structure Of Alpha 1-2 Mannobiose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKR\|A Chain A, Crystal Structure Of Alpha 1-4 Mannobiose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKR\|B Chain B, Crystal Structure Of Alpha 1-4 Mannobiose Bound Trimeric Human Lung Surfactant Protein D >pdb\|3IKR\|C Chain C, Crystal Structure Of Alpha 1-4 Mannobiose Bound Trimeric Human Lung Surfactant Protein D	18.9	52.8	0%	7678	71%
1ODB_A	Chain A, The Crystal Structure Of Human S100a12 - Copper Complex >pdb\|1ODB\|B Chain B, The Crystal Structure Of Human S100a12 - Copper Complex >pdb\|1ODB\|C Chain C, The Crystal Structure Of Human S100a12 - Copper Complex >pdb\|1ODB\|D Chain D, The Crystal Structure Of Human S100a12 - Copper Complex >pdb\|1ODB\|E Chain E, The Crystal Structure Of Human S100a12 - Copper Complex >pdb\|1ODB\|F Chain F, The Crystal Structure Of Human S100a12 - Copper Complex >pdb\|2WC8\|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium >pdb\|2WC8\|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium >pdb\|2WC8\|C Chain C, S100a12 Complex With Zinc In The Absence Of Calcium >pdb\|2WC8\|D Chain D, S100a12 Complex With Zinc In The Absence Of Calcium >pdb\|2WCB\|A Chain A, S100a12 Complex With Zinc In The Absence Of Calcium >pdb\|2WCB\|B Chain B, S100a12 Complex With Zinc In The Absence Of Calcium >pdb\|2WCF\|A Chain A, Calcium-Free (Apo) S100a12 >pdb\|2WCF\|B Chain B, Calcium-Free (Apo) S100a12 >pdb\|2WCF\|C Chain C, Calcium-Free (Apo) S100a12 >pdb\|2WCF\|D Chain D, Calcium-Free (Apo) S100a12 >pdb\|2WCF\|E Chain E, Calcium-Free (Apo) S100a12 >pdb\|2WCF\|F Chain F, Calcium-Free (Apo) S100a12	18.9	49.8	0%	7678	62%
1M4K_A	Chain A, Crystal Structure Of The Human Natural Killer Cell Activator Receptor Kir2ds2 (Cd158j)	18.9	232	2%	7678	100%
1M27_C	Chain C, Crystal Structure Of SapFYNSH3SLAM TERNARY COMPLEX	18.9	35.2	0%	7678	83%
CAD89244.1	immunoglobulin heavy chain [Homo sapiens]	18.9	68.7	0%	7678	100%
CAD89239.1	immunoglobulin heavy chain [Homo sapiens]	18.9	50.7	0%	7678	80%
CAD88649.1	immunoglobulin heavy chain [Homo sapiens]	18.9	54.5	0%	7678	62%
CAD88728.1	immunoglobulin heavy chain [Homo sapiens]	18.9	119	1%	7678	83%
CAD88734.1	immunoglobulin heavy chain [Homo sapiens]	18.9	116	1%	7678	100%
CAD88770.1	immunoglobulin kappa light chain variable region [Homo sapiens]	18.9	18.9	0%	7678	71%
CAD88706.1	immunoglobulin kappa light chain variable region [Homo sapiens]	18.9	137	3%	7678	80%
CAD88647.1	immunoglobulin heavy chain [Homo sapiens]	18.9	86.3	1%	7678	83%
CAD88756.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	129	1%	7678	80%
CAD32733.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	67.9	0%	7678	100%
1D5X_B	Chain B, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Dipeptide Mimetic And Seb >pdb\|1D5Z\|B Chain B, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptidomimetic And Seb >pdb\|1D6E\|B Chain B, Crystal Structure Of Hla-Dr4 Complex With Peptidomimetic And Seb	18.9	198	3%	7678	100%
1FYT_B	Chain B, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr1	18.9	200	2%	7678	100%
CAC28914.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.9	106	1%	7678	100%
1EFX_D	Chain D, Structure Of A Complex Between The Human Natural Killer Cell Receptor Kir2dl2 And A Class I Mhc Ligand Hla-Cw3 >pdb\|1EFX\|E Chain E, Structure Of A Complex Between The Human Natural Killer Cell Receptor Kir2dl2 And A Class I Mhc Ligand Hla-Cw3	18.9	233	2%	7678	100%
CAB46476.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	133	2%	7678	80%
CAB51715.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.9	90.6	1%	7678	100%
P30466.1	RecName: Full=HLA class I histocompatibility antigen, B-18 alpha chain; AltName: Full=MHC class I antigen B*18; Flags: Precursor	18.9	215	3%	7678	100%
1GCZ_A	Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed With Inhibitor >pdb\|1GCZ\|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed With Inhibitor. >pdb\|1GCZ\|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed With Inhibitor. >pdb\|1GD0\|A Chain A, Human Macrophage Migration Inhibitory Factor (Mif) >pdb\|1GD0\|B Chain B, Human Macrophage Migration Inhibitory Factor (Mif) >pdb\|1GD0\|C Chain C, Human Macrophage Migration Inhibitory Factor (Mif)	18.9	154	1%	7678	100%
CAB46461.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	102	1%	7678	100%
Q00987.1	RecName: Full=E3 ubiquitin-protein ligase Mdm2; AltName: Full=p53-binding protein Mdm2; AltName: Full=Oncoprotein Mdm2; AltName: Full=Double minute 2 protein; Short=Hdm2	18.9	573	8%	7678	100%
CAC28906.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.9	73.0	1%	7678	100%
1FV1_B	Chain B, Structural Basis For The Binding Of An Immunodominant Peptide From Myelin Basic Protein In Different Registers By Two Hla-Dr2 Alleles >pdb\|1FV1\|E Chain E, Structural Basis For The Binding Of An Immunodominant Peptide From Myelin Basic Protein In Different Registers By Two Hla-Dr2 Alleles >pdb\|1HQR\|B Chain B, Crystal Structure Of A Superantigen Bound To The High- Affinity, Zinc-Dependent Site On Mhc Class Ii	18.9	199	2%	7678	100%
1MI5_E	Chain E, The Crystal Structure Of Lc13 Tcr In Complex With Hlab8-Ebv Peptide Complex >pdb\|3KPR\|E Chain E, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPR\|J Chain J, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylkawtf A Mimotope >pdb\|3KPS\|E Chain E, Crystal Structure Of The Lc13 Tcr In Complex With Hla B4405 Bound To Eeylqafty A Self Peptide From The Abcd3 Protein	18.9	136	1%	7678	83%
P30685.1	RecName: Full=HLA class I histocompatibility antigen, B-35 alpha chain; AltName: Full=MHC class I antigen B*35; Flags: Precursor	18.9	232	3%	7678	100%
CAC28887.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.9	180	2%	7678	100%
1IQD_C	Chain C, Human Factor Viii C2 Domain Complexed To Human Monoclonal Bo2c11 Fab	18.9	120	1%	7678	100%
1BX2_B	Chain B, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed With A Peptide From Human Myelin Basic Protein >pdb\|1BX2\|E Chain E, Crystal Structure Of Hla-Dr2 (Dra0101,Drb11501) Complexed With A Peptide From Human Myelin Basic Protein	18.9	214	3%	7678	100%
2GJ6_E	Chain E, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|3D39\|E Chain E, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(4-Fluorophenylalanine)) Peptide >pdb\|3D3V\|E Chain E, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(3,4-Difluorophenylalanine)) Peptide	18.9	153	2%	7678	100%
CAC29066.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	85.5	1%	7678	83%
1QSF_E	Chain E, Structure Of A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide Y8a	18.9	150	2%	7678	100%
NP_000962.2	60S ribosomal protein L7 [Homo sapiens]	18.9	219	3%	7678	83%
1DN0_B	Chain B, Structure Of The Fab Fragment From A Human Igm Cold Agglutinin >pdb\|1DN0\|D Chain D, Structure Of The Fab Fragment From A Human Igm Cold Agglutinin	18.9	170	2%	7678	80%
O14818.1	RecName: Full=Proteasome subunit alpha type-7; AltName: Full=Proteasome subunit RC6-1; AltName: Full=Proteasome subunit XAPC7	18.9	321	5%	7678	100%
CAA34288.1	SmB /B' autoimmune antigene [Homo sapiens]	18.9	169	2%	7678	100%
1QFW_A	Chain A, Ternary Complex Of Human Chorionic Gonadotropin With Fv Anti Alpha Subunit And Fv Anti Beta Subunit	18.9	100	1%	7678	83%
1G8Q_A	Chain A, Crystal Structure Of Human Cd81 Extracellular Domain, A Receptor For Hepatitis C Virus >pdb\|1G8Q\|B Chain B, Crystal Structure Of Human Cd81 Extracellular Domain, A Receptor For Hepatitis C Virus >pdb\|1IV5\|A Chain A, New Crystal Form Of Human Cd81 Large Extracellular Loop. >pdb\|1IV5\|B Chain B, New Crystal Form Of Human Cd81 Large Extracellular Loop.	18.9	52.4	0%	7678	71%
CAB46450.1	immunoglobulin light chain variable region [Homo sapiens]	18.9	115	1%	7678	80%
CAB51313.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.9	53.7	0%	7678	83%
NP_690593.1	tumor necrosis factor receptor superfamily member 5 isoform 2 precursor [Homo sapiens]	18.9	98.0	0%	7678	100%
1QQD_B	Chain B, Crystal Structure Of Hla-Cw4, A Ligand For The Kir2d Natural Killer Cell Inhibitory Receptor	18.9	88.9	1%	7678	80%
NP_694542.1	follicular dendritic cell secreted peptide precursor [Homo sapiens]	18.9	151	2%	7678	100%
CAA66156.1	immunoglobulin heavy chain [Homo sapiens]	18.9	87.2	1%	7678	100%
NP_002984.1	C-X-C motif chemokine 6 [Homo sapiens]	18.9	86.3	1%	7678	100%
P42574.2	RecName: Full=Caspase-3; Short=CASP-3; AltName: Full=Apopain; AltName: Full=Cysteine protease CPP32; Short=CPP-32; AltName: Full=Protein Yama; AltName: Full=SREBP cleavage activity 1; Short=SCA-1; Contains: RecName: Full=Caspase-3 subunit p17; Contains: RecName: Full=Caspase-3 subunit p12; Flags: Precursor	18.9	302	4%	7678	100%
CAB59392.1	T cell receptor beta chain variable region [Homo sapiens]	18.9	18.9	0%	7678	50%
1KG0_B	Chain B, Structure Of The Epstein-Barr Virus Gp42 Protein Bound To The Mhc Class Ii Receptor Hla-Dr1	18.9	200	2%	7678	100%
NP_066552.2	NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial precursor [Homo sapiens]	18.9	149	2%	7678	80%
Q29940.1	RecName: Full=HLA class I histocompatibility antigen, B-59 alpha chain; AltName: Full=MHC class I antigen B*59; Flags: Precursor	18.9	167	2%	7678	100%
CAB59394.1	T cell receptor beta chain variable region [Homo sapiens]	18.9	36.1	0%	7678	100%
P28074.3	RecName: Full=Proteasome subunit beta type-5; AltName: Full=Proteasome epsilon chain; AltName: Full=Macropain epsilon chain; AltName: Full=Multicatalytic endopeptidase complex epsilon chain; AltName: Full=Proteasome subunit X; AltName: Full=Proteasome chain 6; AltName: Full=Proteasome subunit MB1; Flags: Precursor	18.9	85.1	1%	7678	80%
1HXY_B	Chain B, Crystal Structure Of Staphylococcal Enterotoxin H In Complex With Human Mhc Class Ii >pdb\|1KLG\|B Chain B, Crystal Structure Of Hla-Dr1TPI(23-37, Thr28-->ile Mutant) Complexed With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2) >pdb\|1KLU\|B Chain B, Crystal Structure Of Hla-Dr1TPI(23-37) Complexed With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2) >pdb\|1LO5\|B Chain B, Crystal Structure Of The D227a Variant Of Staphylococcal Enterotoxin A In Complex With Human Mhc Class Ii >pdb\|1JWM\|B Chain B, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1(Ha Peptide 306-318) With The Superantigen Sec3 >pdb\|1JWS\|B Chain B, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1 (Ha Peptide 306-318) With The Superantigen Sec3 Variant 3b1 >pdb\|1JWU\|B Chain B, Crystal Structure Of The Complex Of The Mhc Class Ii Molecule Hla-Dr1 (Ha Peptide 306-318) With The Superantigen Sec3 Variant 3b2 >pdb\|1PYW\|B Chain B, Human Class Ii Mhc Protein Hla-Dr1 Bound To A Designed Peptide Related To Influenza Virus Hemagglutinin, Fvkqna(Maa)al, In Complex With Staphylococcal Enterotoxin C3 Variant 3b2 (Sec3-3b2) >pdb\|1R5I\|B Chain B, Crystal Structure Of The Mam-Mhc Complex >pdb\|1R5I\|F Chain F, Crystal Structure Of The Mam-Mhc Complex >pdb\|1SJE\|B Chain B, Hla-Dr1 Complexed With A 16 Residue Hiv Capsid Peptide Bound In A Hairpin Conformation >pdb\|1SJH\|B Chain B, Hla-Dr1 Complexed With A 13 Residue Hiv Capsid Peptide >pdb\|1T5W\|B Chain B, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) >pdb\|1T5W\|E Chain E, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) >pdb\|1T5X\|B Chain B, Hla-Dr1 In Complex With A Synthetic Peptide (Aaysdqatplllspr) And The Superantigen Sec3-3b2 >pdb\|2G9H\|B Chain B, Crystal Structure Of Staphylococcal Enterotoxin I (Sei) In Complex With A Human Mhc Class Ii Molecule >pdb\|2OJE\|B Chain B, Mycoplasma Arthritidis-Derived Mitogen Complexed With Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE OF EDTA >pdb\|2OJE\|F Chain F, Mycoplasma Arthritidis-Derived Mitogen Complexed With Class Ii Mhc Molecule Hla-Dr1HA COMPLEX IN THE PRESENCE OF EDTA >pdb\|2IAM\|B Chain B, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|B Chain B, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|G Chain G, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|L Chain L, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2IAN\|Q Chain Q, Structural Basis For Recognition Of Mutant Self By A Tumor- Specific, Mhc Class Ii-Restricted Tcr >pdb\|2ICW\|B Chain B, Crystal Structure Of A Complete Ternary Complex Between Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule >pdb\|2ICW\|E Chain E, Crystal Structure Of A Complete Ternary Complex Between Tcr, Superantigen, And Peptide-Mhc Class Ii Molecule >pdb\|2IPK\|B Chain B, Crystal Structure Of The Mhc Class Ii Molecule Hla-Dr1 In Complex With The Fluorogenic Peptide, Acpkxvkqntlklat (X3- [5-(Dimethylamino)-1,3-Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl]- L-Alanine) And The Superantigen, Sec3 Variant 3b2	18.9	200	2%	7678	100%
1MJN_A	Chain A, Crystal Structure Of The Intermediate Affinity Al I Domain M	18.9	88.0	1%	7678	83%
CAB51292.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.9	154	3%	7678	100%
CAC28013.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	55.8	0%	7678	85%
1H03_P	Chain P, Human Cd55 Domains 3 & 4 >pdb\|1H03\|Q Chain Q, Human Cd55 Domains 3 & 4 >pdb\|1H2Q\|P Chain P, Human Cd55 Domains 3 & 4	18.9	86.8	1%	7678	80%
1MIF_A	Chain A, Macrophage Migration Inhibitory Factor (Mif) >pdb\|1MIF\|B Chain B, Macrophage Migration Inhibitory Factor (Mif) >pdb\|1MIF\|C Chain C, Macrophage Migration Inhibitory Factor (Mif)	18.9	154	1%	7678	100%
CAC03935.1	T-cell receptor beta chain [Homo sapiens]	18.9	50.7	0%	7678	100%
2ILA_A	Chain A, Structure Of Interleukin 1alpha At 2.7-Angstroms Resolution	18.9	82.9	1%	7678	83%
1D5M_B	Chain B, X-Ray Crystal Structure Of Hla-Dr4 Complexed With Peptide And Seb >pdb\|1J8H\|B Chain B, Crystal Structure Of A Complex Of A Human AlphaBETA-T Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class Ii Molecule, Hla-Dr4	18.9	198	3%	7678	100%
1QSE_E	Chain E, Structure Of Human A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide V7r	18.9	153	2%	7678	100%
CAC28003.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.9	103	1%	7678	83%
P63162.1	RecName: Full=Small nuclear ribonucleoprotein-associated protein N; Short=snRNP-N; AltName: Full=Sm protein N; Short=Sm-N; Short=SmN; AltName: Full=Sm protein D; Short=Sm-D; AltName: Full=Tissue-specific-splicing protein	18.9	169	2%	7678	100%
2OD3_A	Chain A, Human Thrombin Chimera With Human Residues 184a, 186, 186a, 186b, 186c And 222 Replaced By Murine Thrombin Equivalents >pdb\|2PGB\|A Chain A, Inhibitor-Free Human Thrombin Mutant C191a-C220a >pdb\|3JZ1\|A Chain A, Crystal Structure Of Human Thrombin Mutant N143p In E:na+ Form >pdb\|3JZ2\|A Chain A, Crystal Structure Of Human Thrombin Mutant N143p In E Form	18.9	34.4	0%	7678	83%
1LJT_A	Chain A, Crystal Structure Of Macrophage Migration Inhibitory Factor Complexed With (S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5- Isoxazole-Acetic Acid Methyl Ester (Iso-1) >pdb\|1LJT\|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory Factor Complexed With (S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5- Isoxazole-Acetic Acid Methyl Ester (Iso-1) >pdb\|1LJT\|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory Factor Complexed With (S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5- Isoxazole-Acetic Acid Methyl Ester (Iso-1)	18.9	154	1%	7678	100%
NP_783642.1	protein SSX3 isoform b [Homo sapiens]	18.9	134	1%	7678	80%
NP_056952.2	killer cell immunoglobulin-like receptor 2DL3 [Homo sapiens]	18.9	481	5%	7678	100%
NP_291024.1	myosin regulatory light chain 12B [Homo sapiens] >ref\|NP_001138416.1\| myosin regulatory light chain 12B [Homo sapiens] >ref\|NP_001138417.1\| myosin regulatory light chain 12B [Homo sapiens]	18.9	139	1%	7678	83%
1MQ8_B	Chain B, Crystal Structure Of Alphal I Domain In Complex With Icam-1 >pdb\|1MQ8\|D Chain D, Crystal Structure Of Alphal I Domain In Complex With Icam-1	18.9	88.0	1%	7678	83%
2DLI_A	Chain A, Killer Immunoglobulin Receptor 2dl2,Trigonal Form	18.9	233	2%	7678	100%
CAB51290.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.9	83.8	3%	7678	83%
P30512.2	RecName: Full=HLA class I histocompatibility antigen, A-29 alpha chain; AltName: Full=MHC class I antigen A*29; AltName: Full=Aw-19; Flags: Precursor	18.9	286	4%	7678	100%
1QRN_E	Chain E, Crystal Structure Of Human A6 Tcr Complexed With Hla-A2 Bound To Altered Htlv-1 Tax Peptide P6a	18.9	135	2%	7678	100%
Q14213.2	RecName: Full=Interleukin-27 subunit beta; Short=IL-27 subunit beta; Short=IL-27B; AltName: Full=Epstein-Barr virus-induced gene 3 protein; Short=EBV-induced gene 3 protein; Flags: Precursor	18.9	263	4%	7678	100%
ACR09644.1	galectin-14 precursor transcription variant 1 [Homo sapiens]	18.9	85.9	1%	7678	80%
P14174.4	RecName: Full=Macrophage migration inhibitory factor; Short=MIF; AltName: Full=Phenylpyruvate tautomerase; AltName: Full=L-dopachrome tautomerase; AltName: Full=L-dopachrome isomerase; AltName: Full=Glycosylation-inhibiting factor; Short=GIF	18.9	154	1%	7678	100%
2H9G_R	Chain R, Crystal Structure Of Phage Derived Fab Bdf1 With Human Death Receptor 5 (Dr5) >pdb\|2H9G\|S Chain S, Crystal Structure Of Phage Derived Fab Bdf1 With Human Death Receptor 5 (Dr5)	18.9	204	3%	7678	100%
Q9NPF7.1	RecName: Full=Interleukin-23 subunit alpha; Short=IL-23 subunit alpha; Short=IL-23-A; AltName: Full=Interleukin-23 subunit p19; Short=IL-23p19; Flags: Precursor	18.9	107	1%	7678	83%
BAA00029.1	pLD78 peptide [Homo sapiens]	18.9	69.1	1%	7678	83%
1H2P_P	Chain P, Human Cd55 Domains 3 & 4	18.9	86.8	1%	7678	80%
1EL0_A	Chain A, Solution Structure Of The Human Cc Chemokine, I-309	18.5	116	1%	7685	83%
AAY57177.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	119	1%	8375	80%
1N6U_A	Chain A, Nmr Structure Of The Interferon-Binding Ectodomain Of The Human Interferon Receptor >pdb\|1N6V\|A Chain A, Average Structure Of The Interferon-Binding Ectodomain Of The Human Type I Interferon Receptor >pdb\|2HYM\|A Chain A, Nmr Based Docking Model Of The Complex Between The Human Type I Interferon Receptor And Human Interferon Alpha-2	18.5	251	4%	10302	100%
P09382.2	RecName: Full=Galectin-1; Short=Gal-1; AltName: Full=Lectin galactoside-binding soluble 1; AltName: Full=Beta-galactoside-binding lectin L-14-I; AltName: Full=Lactose-binding lectin 1; AltName: Full=S-Lac lectin 1; AltName: Full=Galaptin; AltName: Full=14 kDa lectin; AltName: Full=HPL; AltName: Full=HBL; AltName: Full=Putative MAPK-activating protein PM12; AltName: Full=14 kDa laminin-binding protein; Short=HLBP14 >gb\|ACA58297.1\| beta-galactoside-binding lectin precursor [Homo sapiens]	18.5	118	1%	9994	83%
3IB4_A	Chain A, The Double Mutant Of Beta-2 Microglobulin K58p-W60g	18.5	69.1	1%	10302	80%
3MXV_L	Chain L, Crystal Structure Of Fab Fragment Of Anti-Shh 5e1 Chimera	18.5	216	3%	10302	100%
NP_001171760.1	V-set and immunoglobulin domain-containing protein 4 isoform 3 precursor [Homo sapiens]	18.5	264	3%	10302	100%
3H3B_A	Chain A, Crystal Structure Of The Single-Chain Fv (Scfv) Fragment Of Erbb2 Antibody Cha21 In Complex With Residues 1-192 Of Erbb Extracellular Domain >pdb\|3H3B\|B Chain B, Crystal Structure Of The Single-Chain Fv (Scfv) Fragment Of Erbb2 Antibody Cha21 In Complex With Residues 1-192 Of Erbb Extracellular Domain	18.5	235	3%	10302	100%
3KYK_L	Chain L, Crystal Structure Of Li33 Igg1 Fab >pdb\|3KYM\|A Chain A, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|C Chain C, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|E Chain E, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|G Chain G, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|I Chain I, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|K Chain K, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|M Chain M, Crystal Structure Of Li33 Igg2 Di-Fab >pdb\|3KYM\|O Chain O, Crystal Structure Of Li33 Igg2 Di-Fab	18.5	284	4%	10302	100%
3AAZ_B	Chain B, Crystal Structure Of The Humanized Recombinant Fab Fragment Of A Murine; Antibody >pdb\|3AAZ\|L Chain L, Crystal Structure Of The Humanized Recombinant Fab Fragment Of A Murine; Antibody	18.5	201	3%	10302	100%
3H9H_A	Chain A, Human Class I Mhc Hla-A2(A150p) In Complex With The Tel1p Peptide >pdb\|3H9H\|D Chain D, Human Class I Mhc Hla-A2(A150p) In Complex With The Tel1p Peptide >pdb\|3IXA\|A Chain A, Human Class I Mhc Hla-A2(A150p) In Complex With The Tax Peptide >pdb\|3IXA\|D Chain D, Human Class I Mhc Hla-A2(A150p) In Complex With The Tax Peptide	18.5	117	1%	10302	100%
3IU4_L	Chain L, Anti Neugcgm3 Ganglioside Chimeric Antibody Chp3	18.5	203	3%	10302	100%
3FO2_L	Chain L, Crystal Structure Of Hapten Complex Of Catalytic Elimination Antibody 13g5 (Glu(L39)gln Mutant) >pdb\|3FO2\|A Chain A, Crystal Structure Of Hapten Complex Of Catalytic Elimination Antibody 13g5 (Glu(L39)gln Mutant)	18.5	214	2%	10302	100%
3FO1_L	Chain L, Crystal Structure Of Hapten Complex Of Catalytic Elimination Antibody 13g5 (Glu(L39)ala Mutant) >pdb\|3FO1\|A Chain A, Crystal Structure Of Hapten Complex Of Catalytic Elimination Antibody 13g5 (Glu(L39)ala Mutant)	18.5	233	2%	10302	100%
3FO0_L	Chain L, Crystal Structure Of Hapten Complex Of Catalytic Elimination Antibody 13g5 (Wild-Type)	18.5	214	2%	10302	100%
3INU_L	Chain L, Crystal Structure Of An Unbound Kz52 Neutralizing Anti- Ebolavirus Antibody >pdb\|3INU\|N Chain N, Crystal Structure Of An Unbound Kz52 Neutralizing Anti- Ebolavirus Antibody.	18.5	219	2%	10302	100%
ACN63290.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	87.6	1%	10302	83%
ACN63287.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	81.7	1%	10302	80%
ACN63281.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	81.7	1%	10302	80%
ACN63280.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	81.7	1%	10302	80%
ACN63273.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	51.5	0%	10302	83%
ACN63268.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	49.8	0%	10302	83%
ACN63255.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	184	2%	10302	85%
ACN63247.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63261.1\| B cell antibody heavy chain variable region [Homo sapiens]	18.5	49.8	0%	10302	83%
ACN63242.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	86.8	1%	10302	66%
ACN63223.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	82.5	0%	10302	100%
ACN63218.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	51.5	0%	10302	100%
ACN63214.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	50.3	0%	10302	100%
ACN63213.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	51.5	0%	10302	100%
ACN63209.1	B cell antibody heavy chain variable region [Homo sapiens]	18.5	36.1	0%	10302	100%
3GSN_H	Chain H, Crystal Structure Of The Public Ra14 Tcr In Complex With The Hcmv Dominant NlvHLA-A2 Epitope >pdb\|3GSO\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv Peptide >pdb\|3GSQ\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5s Peptide Variant >pdb\|3GSR\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5v Peptide Variant >pdb\|3GSW\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-T8a Peptide Variant >pdb\|3GSX\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-T8v Peptide Variant	18.5	152	2%	10302	100%
3GKW_L	Chain L, Crystal Structure Of The Fab Fragment Of Nimotuzumab. An Anti-Epidermal Growth Factor Receptor Antibody	18.5	249	4%	10302	100%
3HUJ_F	Chain F, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor >pdb\|3HUJ\|H Chain H, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide In Complex With Semi-Invariant Nkt Cell Receptor	18.5	131	1%	10302	83%
ACS88978.1	toll-like receptor 2 [Homo sapiens]	18.5	69.6	0%	10302	66%
ACS88975.1	toll-like receptor 2 [Homo sapiens] >gb\|ACS88976.1\| toll-like receptor 2 [Homo sapiens] >gb\|ACS88977.1\| toll-like receptor 2 [Homo sapiens]	18.5	69.6	0%	10302	66%
2VXV_L	Chain L, Crystal Structure Of Human Igg Abt-325 Fab Fragment	18.5	234	3%	10302	100%
3EKC_A	Chain A, Structure Of W60v Beta-2 Microglobulin Mutant	18.5	69.1	1%	10302	80%
3FT2_A	Chain A, Crystal Structure Of A Citrulline Peptide Variant Of The Minor Histocompatibility Peptide Ha-1 In Complex With Hla- A2 >pdb\|3FT3\|A Chain A, Crystal Structure Of The Minor Histocompatibility Peptide Ha-1his In Complex With Hla-A2 >pdb\|3FT4\|A Chain A, Crystal Structure Of The Minor Histocompatibility Peptide Ha-1arg In Complex With Hla-A2 >pdb\|3GSU\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5t Peptide Variant >pdb\|3GSV\|A Chain A, Crystal Structure Of The Binary Complex Between Hla-A2 And Hcmv Nlv-M5q Peptide Variant	18.5	152	2%	10302	100%
3G9V_A	Chain A, Crystal Structure Of A Soluble Decoy Receptor Il-22bp Bound To Interleukin-22 >pdb\|3G9V\|C Chain C, Crystal Structure Of A Soluble Decoy Receptor Il-22bp Bound To Interleukin-22	18.5	136	1%	10302	80%
3FZU_L	Chain L, Igg1 Fab Characterized By HD EXCHANGE >pdb\|3FZU\|D Chain D, Igg1 Fab Characterized By HD EXCHANGE	18.5	202	2%	10302	100%
3F4M_A	Chain A, Crystal Structure Of Tipe2	18.5	82.9	1%	10302	80%
3G6J_E	Chain E, C3b In Complex With A C3b Specific Fab >pdb\|3G6J\|G Chain G, C3b In Complex With A C3b Specific Fab	18.5	237	3%	10302	100%
ACJ37292.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.5	102	2%	10302	80%
ACJ37289.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.5	84.2	1%	10302	100%
ACJ37281.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.5	121	1%	10302	100%
ACJ37280.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.5	49.8	0%	10302	83%
ACJ37267.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.5	101	1%	10302	85%
ACJ37265.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.5	68.3	1%	10302	71%
ACJ37250.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	18.5	103	1%	10302	100%
3DHM_A	Chain A, Beta 2 Microglobulin Mutant D59p	18.5	87.2	2%	10302	80%
3DHJ_A	Chain A, Beta 2 Microglobulin Mutant W60c	18.5	69.1	1%	10302	80%
3DSH_A	Chain A, Crystal Structure Of Dimeric Interferon Regulatory Factor 5 (Irf-5) Transactivation Domain	18.5	170	2%	10302	80%
3DVN_A	Chain A, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin >pdb\|3DVN\|L Chain L, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin	18.5	252	3%	10302	100%
3DVG_Y	Chain Y, Crystal Structure Of K63-Specific Fab Apu.3a8 Bound To K63- Linked Di-Ubiquitin >pdb\|3DVN\|Y Chain Y, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin >pdb\|3DVN\|V Chain V, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin	18.5	83.8	1%	10302	100%
3DVG_X	Chain X, Crystal Structure Of K63-Specific Fab Apu.3a8 Bound To K63- Linked Di-Ubiquitin >pdb\|3DVN\|X Chain X, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin >pdb\|3DVN\|U Chain U, Crystal Structure Of K63-Specific Fab Apu2.16 Bound To K63- Linked Di-Ubiquitin	18.5	83.8	1%	10302	100%
3DVG_A	Chain A, Crystal Structure Of K63-Specific Fab Apu.3a8 Bound To K63- Linked Di-Ubiquitin	18.5	219	3%	10302	100%
CAR63062.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	85.9	1%	10302	80%
CAR63061.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	87.6	0%	10302	83%
CAR63053.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	18.5	0%	10302	83%
CAR63043.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	36.9	0%	10302	83%
CAR63042.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	68.3	0%	10302	100%
CAR63039.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	68.7	0%	10302	83%
CAR62985.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	116	1%	10302	100%
CAR62983.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	82.1	1%	10302	80%
CAR62982.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	68.7	0%	10302	83%
CAR62926.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	98.4	1%	10302	100%
CAR62915.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	34.4	0%	10302	83%
CAR62894.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.5	83.4	2%	10302	66%
CAR62766.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	102	1%	10302	83%
CAR62728.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	53.2	0%	10302	83%
CAR62724.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	170	2%	10302	83%
CAR62718.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	67.5	0%	10302	83%
CAR62689.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.5	51.1	1%	10302	66%
CAR62657.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	52.8	0%	10302	80%
CAR62646.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	116	1%	10302	100%
CAR62626.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.1	0%	10302	100%
CAR62564.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	115	2%	10302	66%
CAR62556.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	101	1%	10302	100%
CAR62552.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	116	1%	10302	100%
3CSY_B	Chain B, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor >pdb\|3CSY\|D Chain D, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor >pdb\|3CSY\|F Chain F, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor >pdb\|3CSY\|H Chain H, Crystal Structure Of The Trimeric Prefusion Ebola Virus Glycoprotein In Complex With A Neutralizing Antibody From A Human Survivor	18.5	219	2%	10302	100%
3CII_G	Chain G, Structure Of Nkg2aCD94 BOUND TO HLA-E >pdb\|3CII\|I Chain I, Structure Of Nkg2aCD94 BOUND TO HLA-E	18.5	153	1%	10302	100%
2YSS_B	Chain B, Crystal Structure Of Humanized Hyhel-10 Fv Mutant(Hq39kw47y)-Hen Lysozyme Complex	18.5	82.9	0%	10302	83%
2EKS_B	Chain B, Crystal Structure Of Humanized Hyhel-10 Fv-Hen Lysozyme Complex	18.5	82.9	0%	10302	83%
2EIZ_B	Chain B, Crystal Structure Of Humanized Hyhel-10 Fv Mutant(Hw47y)- Hen Lysozyme Complex	18.5	82.9	0%	10302	83%
3BJ9_1	Chain 1, Crystal Structure Of The Surrogate Light Chain Variable Domain Vprebj	18.5	121	1%	10302	85%
2JP0_A	Chain A, Solution Structure Of The N-Terminal Extraceullular Domain Of The Lymphocyte Receptor Cd5 Calculated Using Inferential Structure Determination (Isd)	18.5	51.1	0%	10302	83%
2JOP_A	Chain A, Solution Structure Of The N-Terminal Extracellular Domain Of The Lymphocyte Receptor Cd5 (Cd5 Domain 1)	18.5	51.1	0%	10302	83%
3B2U_A	Chain A, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|B Chain B, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|E Chain E, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|I Chain I, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|M Chain M, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|P Chain P, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|S Chain S, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3B2U\|V Chain V, Crystal Structure Of Isolated Domain Iii Of The Extracellular Region Of The Epidermal Growth Factor Receptor In Complex With The Fab Fragment Of Imc-11f8 >pdb\|3C09\|A Chain A, Crystal Structure The Fab Fragment Of Matuzumab (Fab72000) In Complex With Domain Iii Of The Extracellular Region Of Egfr >pdb\|3C09\|D Chain D, Crystal Structure The Fab Fragment Of Matuzumab (Fab72000) In Complex With Domain Iii Of The Extracellular Region Of Egfr	18.5	197	3%	10302	100%
2JG8_C	Chain C, Crystallographic Structure Of Human C1q Globular Heads Complexed To Phosphatidyl-Serine >pdb\|2JG8\|F Chain F, Crystallographic Structure Of Human C1q Globular Heads Complexed To Phosphatidyl-Serine >pdb\|2JG9\|C Chain C, Crystallographic Structure Of Human C1q Globular Heads (P1) >pdb\|2JG9\|F Chain F, Crystallographic Structure Of Human C1q Globular Heads (P1) >pdb\|2WNU\|C Chain C, Complex Between C1q Globular Heads And Heparan Sulfate >pdb\|2WNU\|F Chain F, Complex Between C1q Globular Heads And Heparan Sulfate >pdb\|2WNV\|C Chain C, Complex Between C1q Globular Heads And Deoxyribose >pdb\|2WNV\|F Chain F, Complex Between C1q Globular Heads And Deoxyribose	18.5	196	3%	10302	100%
3BDW_A	Chain A, Human Cd94NKG2A >pdb\|3BDW\|C Chain C, Human Cd94NKG2A >pdb\|3CDG\|J Chain J, Human Cd94NKG2A IN COMPLEX WITH HLA-E >pdb\|3CDG\|E Chain E, Human Cd94NKG2A IN COMPLEX WITH HLA-E	18.5	170	1%	10302	100%
2R56_L	Chain L, Crystal Structure Of A Recombinant Ige Fab Fragment In Complex With Bovine Beta-Lactoglobulin Allergen >pdb\|2R56\|M Chain M, Crystal Structure Of A Recombinant Ige Fab Fragment In Complex With Bovine Beta-Lactoglobulin Allergen	18.5	204	3%	10302	100%
2VB5_A	Chain A, Solution Structure Of W60g Mutant Of Human Beta2- Microglobulin >pdb\|2Z9T\|A Chain A, Crystal Structure Of The Human Beta-2 Microglobulin Mutant W60g	18.5	69.1	1%	10302	80%
2UWE_A	Chain A, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation >pdb\|2UWE\|H Chain H, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation	18.5	117	1%	10302	100%
2DHY_A	Chain A, Solution Structure Of The Cue Domain In The Human Cue Domain Containing Protein 1 (Cuedc1)	18.5	33.9	0%	10302	80%
2D8I_A	Chain A, Solution Structure Of The Pdz Domain Of T-Cell Lymphoma Invasion And Metastasis 1 Varian	18.5	70.8	0%	10302	100%
NP_001093901.1	V-set and immunoglobulin domain-containing protein 4 isoform 2 precursor [Homo sapiens]	18.5	412	5%	10302	100%
2PO6_D	Chain D, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain >pdb\|2PO6\|H Chain H, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain	18.5	131	1%	10302	83%
1O7B_T	Chain T, Refined Solution Structure Of The Human Tsg-6 Link Module >pdb\|1O7C\|T Chain T, Solution Structure Of The Human Tsg-6 Link Module In The Presence Of A Hyaluronan Octasaccharide	18.5	53.2	0%	10302	100%
2H3N_A	Chain A, Crystal Structure Of A Surrogate Light Chain (Lambda5 And Vpreb) Homodimer >pdb\|2H3N\|C Chain C, Crystal Structure Of A Surrogate Light Chain (Lambda5 And Vpreb) Homodimer	18.5	103	1%	10302	71%
2J6E_H	Chain H, Crystal Structure Of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc Epitope And Evidence For Affinity Maturation >pdb\|2J6E\|I Chain I, Crystal Structure Of An Autoimmune Complex Between A Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc Epitope And Evidence For Affinity Maturation	18.5	186	2%	10302	100%
2JGX_A	Chain A, Structure Of Ccp Module 7 Of Complement Factor H - The Amd Not At Risk Varient (402y)	18.5	68.7	0%	10302	80%
2JGW_A	Chain A, Structure Of Ccp Module 7 Of Complement Factor H - The Amd At Risk Varient (402h)	18.5	68.7	0%	10302	80%
2E8D_A	Chain A, 3d Structure Of Amyloid Protofilaments Of Beta2- Microglobulin Fragment Probed By Solid-State Nmr >pdb\|2E8D\|B Chain B, 3d Structure Of Amyloid Protofilaments Of Beta2- Microglobulin Fragment Probed By Solid-State Nmr >pdb\|2E8D\|C Chain C, 3d Structure Of Amyloid Protofilaments Of Beta2- Microglobulin Fragment Probed By Solid-State Nmr >pdb\|2E8D\|D Chain D, 3d Structure Of Amyloid Protofilaments Of Beta2- Microglobulin Fragment Probed By Solid-State Nmr	18.5	18.5	0%	10302	80%
2NMS_A	Chain A, The Crystal Structure Of The Extracellular Domain Of The Inhibitor Receptor Expressed On Myeloid Cells Irem-1	18.5	98.0	1%	10302	100%
2ICC_A	Chain A, Extracellular Domain Of Crig >pdb\|2ICE\|S Chain S, Crig Bound To C3c >pdb\|2ICE\|T Chain T, Crig Bound To C3c >pdb\|2ICF\|S Chain S, Crig Bound To C3b	18.5	82.9	1%	10302	100%
2HFF_A	Chain A, Crystal Structure Of Cb2 Fab >pdb\|2HFF\|L Chain L, Crystal Structure Of Cb2 Fab	18.5	237	3%	10302	100%
2HFG_L	Chain L, Crystal Structure Of Hbr3 Bound To Cb3s-Fab	18.5	237	3%	10302	100%
NP_872289.1	NSFL1 cofactor p47 isoform c [Homo sapiens]	18.5	232	2%	10302	100%
2D4D_A	Chain A, The Crystal Structure Of Human Beta2-Microglobulin, L39w W60f W95f Mutant	18.5	52.0	1%	10302	80%
NP_004900.2	chondrosarcoma-associated gene 2/3 protein isoform 2 [Homo sapiens] >ref\|NP_001123300.1\| chondrosarcoma-associated gene 2/3 protein isoform b [Homo sapiens]	18.5	168	3%	10302	100%
ABG38455.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38460.1\| immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38461.1\| immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38462.1\| immunglobulin heavy chain variable region [Homo sapiens]	18.5	82.5	1%	10302	100%
ABG38438.1	immunglobulin heavy chain variable region [Homo sapiens]	18.5	147	2%	10302	80%
ABG38370.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	54.5	1%	10302	100%
ABG38366.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	130	2%	10302	100%
ABG38359.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	102	1%	10302	83%
ABG38379.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	83.4	1%	10302	83%
CAJ14123.1	T-cell receptor beta chain [Homo sapiens]	18.5	18.5	0%	10302	71%
2AGJ_H	Chain H, Crystal Structure Of A Glycosylated Fab From An Igm Cryoglobulin With Properties Of A Natural Proteolytic Antibody	18.5	166	2%	10302	100%
2AGJ_L	Chain L, Crystal Structure Of A Glycosylated Fab From An Igm Cryoglobulin With Properties Of A Natural Proteolytic Antibody	18.5	217	3%	10302	100%
CAJ90642.1	immunoglobulin light chain variable region [Homo sapiens] >emb\|CAJ90643.1\| immunoglobulin light chain variable region [Homo sapiens]	18.5	168	2%	10302	83%
CAJ90636.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	118	2%	10302	80%
2EYS_B	Chain B, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION >pdb\|2EYT\|B Chain B, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION >pdb\|2EYT\|D Chain D, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION	18.5	131	1%	10302	83%
2EYR_B	Chain B, A Structural Basis For Selection And Cross-Species Reactivity Of The Semi-Invariant Nkt Cell Receptor In Cd1dGLYCOLIPID RECOGNITION	18.5	131	1%	10302	83%
2FJF_L	Chain L, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|A Chain A, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|C Chain C, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|E Chain E, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|G Chain G, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|J Chain J, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|M Chain M, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|O Chain O, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|Q Chain Q, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|S Chain S, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|U Chain U, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2FJF\|W Chain W, Structure Of The G6 Fab, A Phage Derived Vegf Binding Fab >pdb\|2H9G\|A Chain A, Crystal Structure Of Phage Derived Fab Bdf1 With Human Death Receptor 5 (Dr5) >pdb\|2H9G\|L Chain L, Crystal Structure Of Phage Derived Fab Bdf1 With Human Death Receptor 5 (Dr5) >pdb\|2R0K\|L Chain L, Protease Domain Of Hgfa With Inhibitor Fab58	18.5	237	3%	10302	100%
NP_852479.1	eppin isoform 2 [Homo sapiens]	18.5	85.5	1%	10302	80%
NP_001074317.2	chondrosarcoma-associated gene 2/3 protein isoform 1 [Homo sapiens]	18.5	185	3%	10302	100%
CAD10378.1	killer cell immunoglobulin receptor [Homo sapiens]	18.5	330	4%	10302	100%
O95976.2	RecName: Full=Immunoglobulin superfamily member 6; Short=IgSF6; AltName: Full=Protein DORA; Flags: Precursor	18.5	165	2%	10302	100%
NP_075577.1	calpain-10 isoform g [Homo sapiens]	18.5	152	1%	10302	100%
AAC61603.1	immunoglobulin variable region used by the ITC39 heavy chain (subgroup VH3) (anti-cytomeglovirus glycoprotein B (AD-1 epitope)) [Homo sapiens]	18.5	187	2%	10302	83%
AAB30257.2	immunoglobulin light chain variable region Fab subunit [Homo sapiens]	18.5	100	1%	10302	80%
AAC61605.1	immunoglobulin variable region used by the ITC48 heavy chain (subgroup VH4) (anti-cytomeglovirus glycoprotein B (AD-1 epitope)) [Homo sapiens]	18.5	70.0	0%	10302	83%
AAB09425.1	Na,K-ATPase gamma subunit [Homo sapiens]	18.5	102	1%	10302	83%
P24001.3	RecName: Full=Interleukin-32; Short=IL-32; AltName: Full=Natural killer cells protein 4; AltName: Full=Tumor necrosis factor alpha-inducing factor; Flags: Precursor	18.5	103	1%	10302	83%
NP_001171759.1	V-set and immunoglobulin domain-containing protein 4 isoform 4 precursor [Homo sapiens]	18.5	347	4%	10302	100%
AAL65228.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	70.8	0%	10302	100%
NP_057410.1	chemokine-like factor isoform c [Homo sapiens]	18.5	134	1%	10302	100%
AAC61606.1	immunoglobulin variable region used by the ITC48 kappa light chain (subgroup V kappa IV) (anti-cytomeglovirus glycoprotein B (A [Homo sapiens]	18.5	80.8	1%	10302	80%
AAC41982.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	18.5	67.9	1%	10302	83%
AAD47066.1	anti-HLA-A2/A28 immunoglobulin light chain variable region [Homo sapiens]	18.5	102	1%	10302	100%
ABG38372.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	67.0	0%	10302	83%
AAZ32310.1	immunoglobulin kappa light chain [Homo sapiens]	18.5	119	1%	10302	100%
AAZ32313.1	immunoglobulin kappa light chain [Homo sapiens]	18.5	82.1	0%	10302	100%
AAZ32304.1	immunoglobulin kappa light chain [Homo sapiens]	18.5	101	1%	10302	100%
AAZ32312.1	immunoglobulin kappa light chain [Homo sapiens]	18.5	100	1%	10302	80%
AAY57136.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	151	2%	10302	100%
AAY57135.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	101	1%	10302	100%
AAY57070.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	121	2%	10302	100%
AAY57079.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	103	1%	10302	100%
AAY33478.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.5	36.5	0%	10302	50%
AAY33479.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.5	54.5	1%	10302	100%
AAY33481.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.5	102	2%	10302	100%
AAY33308.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	52.0	0%	10302	100%
AAY33356.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.5	85.1	1%	10302	100%
AAY33242.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	65.8	0%	10302	83%
AAY33203.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	118	2%	10302	80%
AAY33313.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.6	1%	10302	66%
AAY33256.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33291.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.6	1%	10302	66%
AAY33223.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.6	1%	10302	66%
AAY33358.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.5	54.5	1%	10302	100%
AAY33281.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33305.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.6	1%	10302	66%
AAY33280.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	70.4	1%	10302	83%
AAY33266.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	83.4	1%	10302	100%
AAY33311.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	103	1%	10302	100%
AAY33297.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	49.4	0%	10302	83%
AAY33335.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.1	0%	10302	85%
AAY33199.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	71.3	0%	10302	83%
AAY33388.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.5	71.3	1%	10302	100%
AAY33284.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	54.1	1%	10302	60%
AAY33265.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	35.6	0%	10302	83%
AAY33270.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	53.2	0%	10302	85%
AAY33293.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33312.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.5	69.6	1%	10302	66%
AAY16601.1	immunoglobulin kappa light chain [Homo sapiens]	18.5	117	1%	10302	80%
AAB31471.1	HIV-specific T-cell antigen receptor beta chain {V-D-J junction, Vbeta19 subset, clone 1.69} [human, patient 1, peripheral blood mononuclear cells, day 20 after onset of symptoms, Peptide Partial, 15 aa] >gb\|AAB31473.1\| HIV-specific T-cell antigen receptor beta chain {V-D-J junction, Vbeta19 subset, clone 3.17} [human, patient 1, peripheral blood mononuclear cells, day 136 after onset of symptoms, Peptide Partial, 15 aa]	18.5	33.9	0%	10302	100%
AAB50737.1	T-cell receptor V3J1S1 beta chain [human, CD4- large granular lymphocytes, patient PGSC P1 isolate, Peptide Partial, 19 aa]	18.5	18.5	0%	10302	100%
AAB50745.1	T-cell receptor V15J2S1 beta chain [human, CD4- large granular lymphocytes, patient REFE R1 isolate, Peptide, 20 aa]	18.5	18.5	0%	10302	57%
AAB50746.1	T-cell receptor V15J2S2 beta chain [human, CD4+ large granular lymphocytes, patient REFE R1 isolate, Peptide, 20 aa]	18.5	18.5	0%	10302	57%
2A9M_L	Chain L, Structural Analysis Of A Tight-Binding Fluorescein-Scfv; Apo Form >pdb\|2A9M\|M Chain M, Structural Analysis Of A Tight-Binding Fluorescein-Scfv; Apo Form >pdb\|2A9N\|L Chain L, A Mutation Designed To Alter Crystal Packing Permits Structural Analysis Of A Tight-Binding Fluorescein-Scfv Complex >pdb\|2A9N\|M Chain M, A Mutation Designed To Alter Crystal Packing Permits Structural Analysis Of A Tight-Binding Fluorescein-Scfv Complex	18.5	98.8	1%	10302	83%
2AV1_A	Chain A, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The E63q And K66a Mutations In The Heavy Chain >pdb\|2AV1\|D Chain D, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The E63q And K66a Mutations In The Heavy Chain.	18.5	117	1%	10302	100%
2AV7_A	Chain A, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The K66a Mutation In The Heavy Chain >pdb\|2AV7\|D Chain D, Crystal Structure Of Htlv-1 Tax Peptide Bound To Human Class I Mhc Hla-A2 With The K66a Mutation In The Heavy Chain. >pdb\|2J8U\|A Chain A, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation. >pdb\|2J8U\|H Chain H, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation.	18.5	117	1%	10302	100%
1U6A_L	Chain L, Crystal Structure Of The Broadly Neutralizing Anti-Hiv Fab F105 >pdb\|3HI1\|L Chain L, Structure Of Hiv-1 Gp120 (Core With V3) In Complex With Cd4- Binding-Site Antibody F105 >pdb\|3HI1\|A Chain A, Structure Of Hiv-1 Gp120 (Core With V3) In Complex With Cd4- Binding-Site Antibody F105	18.5	234	3%	10302	100%
1ZA3_L	Chain L, The Crystal Structure Of The Ysd1 Fab Bound To Dr5	18.5	219	3%	10302	100%
1TZG_L	Chain L, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A 13-Residue Peptide Containing The 4e10 Epitope On Gp41 >pdb\|1TZG\|M Chain M, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A 13-Residue Peptide Containing The 4e10 Epitope On Gp41 >pdb\|2FX7\|L Chain L, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A 16-Residue Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|L Chain L, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|M Chain M, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|N Chain N, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX8\|O Chain O, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With An Aib-Induced Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX9\|L Chain L, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A Thioether-Linked Peptide Encompassing The 4e10 Epitope On Gp41 >pdb\|2FX9\|M Chain M, Crystal Structure Of Hiv-1 Neutralizing Human Fab 4e10 In Complex With A Thioether-Linked Peptide Encompassing The 4e10 Epitope On Gp41	18.5	199	2%	10302	100%
1T3G_A	Chain A, Crystal Structure Of The TollINTERLEUKIN-1 Receptor (Tir) Domain Of Human Il-1rapl >pdb\|1T3G\|B Chain B, Crystal Structure Of The TollINTERLEUKIN-1 Receptor (Tir) Domain Of Human Il-1rapl	18.5	113	1%	10302	100%
1VFQ_A	Chain A, The Crystal Structure Of Human Coactosin-Like Protein At 1.9 A Resolution	18.5	50.7	0%	10302	71%
1UJ3_A	Chain A, Crystal Structure Of A Humanized Fab Fragment Of Anti- Tissue-Factor Antibody In Complex With Tissue Factor	18.5	188	2%	10302	100%
1S3K_L	Chain L, Crystal Structure Of A Humanized Fab (Hu3s193) In Complex With The Lewis Y Tetrasaccharide	18.5	265	4%	10302	100%
CAF05810.2	killer cell immunoglobulin-like receptor [Homo sapiens]	18.5	317	4%	10302	100%
CAF05811.2	killer cell immunoglobulin-like receptor [Homo sapiens]	18.5	314	4%	10302	100%
CAG29711.1	immunoglobulin heavy chain [Homo sapiens]	18.5	70.4	0%	10302	83%
CAG29707.1	immunoglobulin heavy chain [Homo sapiens]	18.5	66.2	0%	10302	80%
CAG29713.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62723.1\| immunoglobulin heavy chain variable region [Homo sapiens]	18.5	152	1%	10302	83%
CAG29705.1	immunoglobulin kappa light chain [Homo sapiens] >emb\|CAR62736.1\| immunoglobulin kappa chain variable region [Homo sapiens]	18.5	83.8	0%	10302	100%
CAE54372.1	immunoglobulin heavy chain [Homo sapiens]	18.5	104	1%	10302	100%
1RHH_A	Chain A, Crystal Structure Of The Broadly Hiv-1 Neutralizing Fab X5 At 1.90 Angstrom Resolution >pdb\|1RHH\|C Chain C, Crystal Structure Of The Broadly Hiv-1 Neutralizing Fab X5 At 1.90 Angstrom Resolution	18.5	131	1%	10302	100%
1RZ8_A	Chain A, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 17b >pdb\|1RZ8\|C Chain C, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive Antibody 17b	18.5	217	2%	10302	100%
1PK6_C	Chain C, Globular Head Of The Complement System Protein C1q	18.5	196	3%	10302	100%
1PG7_L	Chain L, Murine 6a6 Fab In Complex With Humanized Anti-Tissue Factor D3h44 Fab >pdb\|1PG7\|M Chain M, Murine 6a6 Fab In Complex With Humanized Anti-Tissue Factor D3h44 Fab	18.5	240	4%	10302	100%
CAD89262.1	immunoglobulin kappa light chain [Homo sapiens]	18.5	98.8	1%	10302	75%
CAD88672.1	immunoglobulin heavy chain [Homo sapiens]	18.5	52.4	0%	10302	83%
CAD88657.1	immunoglobulin heavy chain [Homo sapiens]	18.5	99.7	1%	10302	80%
CAD88712.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	67.9	0%	10302	83%
CAD88669.1	immunoglobulin heavy chain [Homo sapiens]	18.5	52.4	1%	10302	83%
CAD88677.1	immunoglobulin heavy chain [Homo sapiens]	18.5	68.7	0%	10302	100%
CAD88714.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	68.7	0%	10302	66%
CAD88725.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	68.7	0%	10302	100%
CAD88769.1	immunoglobulin kappa light chain variable region [Homo sapiens]	18.5	35.2	0%	10302	80%
CAD88704.1	immunoglobulin kappa light chain variable region [Homo sapiens]	18.5	52.8	0%	10302	100%
CAD88694.1	immunoglobulin kappa light chain variable region [Homo sapiens]	18.5	34.8	0%	10302	80%
CAD88670.1	immunoglobulin heavy chain [Homo sapiens]	18.5	117	2%	10302	100%
CAD88739.1	immunoglobulin heavy chain [Homo sapiens]	18.5	66.6	1%	10302	85%
CAD88680.1	immunoglobulin heavy chain [Homo sapiens]	18.5	33.9	0%	10302	83%
CAD88741.1	immunoglobulin kappa light chain variable region [Homo sapiens]	18.5	51.5	0%	10302	80%
CAD88658.1	immunoglobulin heavy chain [Homo sapiens]	18.5	51.1	0%	10302	100%
CAD88737.1	immunoglobulin heavy chain [Homo sapiens]	18.5	82.5	1%	10302	100%
CAD88707.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	67.9	0%	10302	83%
CAD88763.1	immunoglobulin heavy chain [Homo sapiens]	18.5	115	1%	10302	100%
CAD88656.1	immunoglobulin heavy chain [Homo sapiens]	18.5	85.5	0%	10302	83%
CAD88735.1	immunoglobulin heavy chain [Homo sapiens]	18.5	69.6	0%	10302	83%
CAD88645.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	65.8	1%	10302	83%
CAC03904.1	T-cell receptor beta chain [Homo sapiens]	18.5	51.5	0%	10302	83%
CAB46463.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	131	1%	10302	100%
P10319.1	RecName: Full=HLA class I histocompatibility antigen, B-58 alpha chain; AltName: Full=MHC class I antigen B*58; AltName: Full=Bw-58; Flags: Precursor	18.5	183	2%	10302	100%
NP_031360.1	natural killer cells antigen CD94 isoform 2 [Homo sapiens]	18.5	170	1%	10302	100%
CAC48305.1	T-cell receptor beta chain [Homo sapiens]	18.5	51.5	0%	10302	83%
NP_003055.1	antileukoproteinase precursor [Homo sapiens]	18.5	101	1%	10302	100%
P05089.2	RecName: Full=Arginase-1; AltName: Full=Type I arginase; AltName: Full=Liver-type arginase >pdb\|1WVA\|A Chain A, Crystal Structure Of Human Arginase I From Twinned Crystal >pdb\|1WVA\|B Chain B, Crystal Structure Of Human Arginase I From Twinned Crystal >pdb\|2AEB\|A Chain A, Crystal Structure Of Human Arginase I At 1.29 A Resolution And Exploration Of Inhibition In Immune Response. >pdb\|2AEB\|B Chain B, Crystal Structure Of Human Arginase I At 1.29 A Resolution And Exploration Of Inhibition In Immune Response.	18.5	353	5%	10302	83%
CAB59402.1	T cell receptor beta chain variable region [Homo sapiens]	18.5	51.5	0%	10302	83%
NP_066932.1	thymosin beta-4 [Homo sapiens]	18.5	34.4	0%	10302	80%
CAC29068.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	52.4	0%	10302	83%
CAC28002.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	52.0	0%	10302	83%
CAC03980.1	T-cell receptor beta chain [Homo sapiens]	18.5	52.4	0%	10302	83%
CAC28006.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.5	52.0	0%	10302	83%
CAB51314.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.5	137	2%	10302	100%
1IQD_A	Chain A, Human Factor Viii C2 Domain Complexed To Human Monoclonal Bo2c11 Fab	18.5	234	3%	10302	100%
CAC03765.1	T-cell receptor beta chain [Homo sapiens]	18.5	34.4	0%	10302	80%
CAB51304.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.5	68.7	1%	10302	83%
CAC28893.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.5	117	1%	10302	83%
1DL7_H	Chain H, The Structural Basis Of Repertoire Shift In An Immune Response To Phosphocholine	18.5	35.6	0%	10302	83%
NP_061838.1	triggering receptor expressed on myeloid cells 2 precursor [Homo sapiens] >sp\|Q9NZC2.1\|TREM2_HUMAN RecName: Full=Triggering receptor expressed on myeloid cells 2; Short=TREM-2; AltName: Full=Triggering receptor expressed on monocytes 2; Flags: Precursor >gb\|ABB01002.1\| triggering receptor expressed on myeloid cells 2 [Homo sapiens]	18.5	232	3%	10302	100%
A41287	Ig heavy chain precursor V-IV region (120-16) (anti-HIV-1) - human >gb\|AAA52941.1\| anti-HIV1 antibody [Homo sapiens]	18.5	50.3	1%	10302	83%
1QRN_A	Chain A, Crystal Structure Of Human A6 Tcr Complexed With Hla-A2 Bound To Altered Htlv-1 Tax Peptide P6a >pdb\|1QSE\|A Chain A, Structure Of Human A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide V7r >pdb\|1S9W\|A Chain A, Crystal Structure Analysis Of Ny-Eso-1 Epitope, Sllmwitqc, In Complex With Hla-A2 >pdb\|1S9X\|A Chain A, Crystal Structure Analysis Of Ny-Eso-1 Epitope Analogue, Sllmwitqa, In Complex With Hla-A2 >pdb\|1S9Y\|A Chain A, Crystal Structure Analysis Of Ny-Eso-1 Epitope Analogue, Sllmwitqs, In Complex With Hla-A2 >pdb\|2F54\|A Chain A, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity >pdb\|2F54\|F Chain F, Directed Evolution Of Human T Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Increasing Apparent Cross- Reactivity >pdb\|3BGM\|A Chain A, Crystal Structure Of Pkd2 Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3BH8\|A Chain A, Crystal Structure Of Rqa_m Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3BHB\|A Chain A, Crystal Structure Of Kmd Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3D25\|A Chain A, Crystal Structure Of Ha-1 Minor Histocompatibility Antigen Bound To Human Class I Mhc Hla-A2	18.5	117	1%	10302	100%
CAB46471.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	152	2%	10302	100%
P30491.1	RecName: Full=HLA class I histocompatibility antigen, B-53 alpha chain; AltName: Full=MHC class I antigen B*53; AltName: Full=Bw-53; Flags: Precursor	18.5	183	2%	10302	100%
CAC20459.1	immunoglobulin heavy chain constant region kappa [Homo sapiens]	18.5	118	1%	10302	100%
CAB46466.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	68.7	0%	10302	100%
NP_006212.1	peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [Homo sapiens]	18.5	132	1%	10302	100%
P18464.1	RecName: Full=HLA class I histocompatibility antigen, B-51 alpha chain; AltName: Full=MHC class I antigen B*51; Flags: Precursor	18.5	181	2%	10302	100%
CAC28904.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.5	51.1	0%	10302	83%
1BVK_B	Chain B, Humanized Anti-Lysozyme Fv Complexed With Lysozyme >pdb\|1BVK\|E Chain E, Humanized Anti-Lysozyme Fv Complexed With Lysozyme	18.5	158	1%	10302	83%
CAC03983.1	T-cell receptor beta chain [Homo sapiens]	18.5	50.3	0%	10302	71%
1KFA_L	Chain L, Crystal Structure Of Fab Fragment Complexed With Gibberellin A4 >pdb\|1KFA\|M Chain M, Crystal Structure Of Fab Fragment Complexed With Gibberellin A4	18.5	217	2%	10302	100%
1O77_A	Chain A, Crystal Structure Of The C713s Mutant Of The Tir Domain Of Human Tlr2 >pdb\|1O77\|B Chain B, Crystal Structure Of The C713s Mutant Of The Tir Domain Of Human Tlr2 >pdb\|1O77\|C Chain C, Crystal Structure Of The C713s Mutant Of The Tir Domain Of Human Tlr2 >pdb\|1O77\|D Chain D, Crystal Structure Of The C713s Mutant Of The Tir Domain Of Human Tlr2 >pdb\|1O77\|E Chain E, Crystal Structure Of The C713s Mutant Of The Tir Domain Of Human Tlr2	18.5	85.9	1%	10302	66%
NP_872328.1	family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 precursor [Homo sapiens] >ref\|NP_001005527.1\| family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 precursor [Homo sapiens]	18.5	116	1%	10302	83%
NP_996667.2	peroxisomal 3,2-trans-enoyl-CoA isomerase isoform 2 [Homo sapiens]	18.5	219	3%	10302	80%
P20718.1	RecName: Full=Granzyme H; AltName: Full=Cytotoxic T-lymphocyte proteinase; AltName: Full=Cathepsin G-like 2; Short=CTSGL2; AltName: Full=CCP-X; AltName: Full=Cytotoxic serine protease C; Short=CSP-C; Flags: Precursor	18.5	232	3%	10302	85%
CAC03897.1	T-cell receptor beta chain [Homo sapiens]	18.5	52.0	0%	10302	83%
NP_778225.1	histone H2B type 3-B [Homo sapiens]	18.5	115	2%	10302	83%
NP_001129.1	agouti-related protein precursor [Homo sapiens]	18.5	50.3	0%	10302	83%
CAB59396.1	T cell receptor beta chain variable region [Homo sapiens]	18.5	130	2%	10302	100%
1B09_A	Chain A, Human C-Reactive Protein Complexed With Phosphocholine >pdb\|1B09\|B Chain B, Human C-Reactive Protein Complexed With Phosphocholine >pdb\|1B09\|C Chain C, Human C-Reactive Protein Complexed With Phosphocholine >pdb\|1B09\|D Chain D, Human C-Reactive Protein Complexed With Phosphocholine >pdb\|1B09\|E Chain E, Human C-Reactive Protein Complexed With Phosphocholine	18.5	71.3	0%	10302	100%
1FYX_A	Chain A, Crystal Structure Of P681h Mutant Of Tir Domain Of Human Tlr2	18.5	118	1%	10302	75%
CAB99323.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	152	1%	10302	100%
1DT4_A	Chain A, Crystal Structure Of Nova-1 Kh3 K-Homology Rna-Binding Domain	18.5	66.2	0%	10302	100%
CAB51716.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	54.1	0%	10302	83%
CAC03842.1	T-cell receptor beta chain [Homo sapiens]	18.5	67.9	1%	10302	100%
CAB46479.1	immunoglobulin light chain variable region [Homo sapiens]	18.5	35.6	0%	10302	83%
CAB76466.1	immunoglobulin heavy chain variable chain [Homo sapiens]	18.5	67.9	0%	10302	83%
1OGA_A	Chain A, A Structural Basis For Immunodominant Human T-Cell Receptor Recognition >pdb\|1P7Q\|A Chain A, Crystal Structure Of Hla-A2 Bound To Lir-1, A Host And Viral Mhc Receptor >pdb\|2BNQ\|A Chain A, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2BNR\|A Chain A, Structural And Kinetic Basis For Heightened Immunogenicity Of T Cell Vaccines >pdb\|2P5E\|A Chain A, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry >pdb\|2P5W\|A Chain A, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Reveal Native Diagonal Binding Geometry >pdb\|2PYE\|A Chain A, Crystal Structures Of High Affinity Human T-Cell Receptors Bound To Pmhc Revealnative Diagonal Binding Geometry Tcr Clone C5c1 Complexed With Mhc >pdb\|2V2W\|A Chain A, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement >pdb\|2V2W\|D Chain D, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement >pdb\|2V2X\|A Chain A, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement. >pdb\|2V2X\|D Chain D, T Cell Cross-Reactivity And Conformational Changes During Tcr Engagement. >pdb\|2VLJ\|A Chain A, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLK\|A Chain A, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLL\|A Chain A, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLL\|D Chain D, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|A Chain A, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|2VLR\|F Chain F, The Structural Dynamics And Energetics Of An Immunodominant T-Cell Receptor Are Programmed By Its Vbeta Domain >pdb\|3GJF\|A Chain A, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJF\|D Chain D, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|A Chain A, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|D Chain D, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|J Chain J, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3GJG\|P Chain P, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|A Chain A, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|D Chain D, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|J Chain J, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HAE\|P Chain P, Rational Development Of High-Affinity T-Cell Receptor-Like Antibodies >pdb\|3HG1\|A Chain A, Germline-Governed Recognition Of A Cancer Epitope By An Immunodominant Human T Cell Receptor	18.5	117	1%	10302	100%
NP_631947.1	mannan-binding lectin serine protease 2 isoform 2 precursor [Homo sapiens]	18.5	136	2%	10302	80%
Q6P589.1	RecName: Full=Tumor necrosis factor alpha-induced protein 8-like protein 2; Short=TNF alpha-induced protein 8-like protein 2; Short=TNFAIP8-like protein 2; Short=TIPE2; AltName: Full=Inflammation factor protein 20	18.5	100	1%	10302	80%
P18465.1	RecName: Full=HLA class I histocompatibility antigen, B-57 alpha chain; AltName: Full=MHC class I antigen B*57; AltName: Full=Bw-57; Flags: Precursor	18.5	213	2%	10302	100%
NP_066972.1	coactosin-like protein [Homo sapiens]	18.5	50.7	0%	10302	71%
2HLA_A	Chain A, Specificity Pockets For The Side Chains Of Peptide Antigens In Hla-Aw68	18.5	134	1%	10302	100%
NP_009199.1	V-set and immunoglobulin domain-containing protein 4 isoform 1 precursor [Homo sapiens]	18.5	495	6%	10302	100%
3D5O_A	Chain A, Structural Recognition And Functional Activation Of Fcrr By Innate Pentraxins >pdb\|3D5O\|B Chain B, Structural Recognition And Functional Activation Of Fcrr By Innate Pentraxins >pdb\|3D5O\|C Chain C, Structural Recognition And Functional Activation Of Fcrr By Innate Pentraxins >pdb\|3D5O\|D Chain D, Structural Recognition And Functional Activation Of Fcrr By Innate Pentraxins >pdb\|3D5O\|E Chain E, Structural Recognition And Functional Activation Of Fcrr By Innate Pentraxins	18.5	220	3%	10302	83%
D41287	Ig heavy chain V-IV region (268-D) (anti-HIV-1) - human >gb\|AAA52945.1\| immunoglobulin heavy chain anti-HIV1 antibody VDJ region [Homo sapiens]	18.5	100	1%	10302	83%
NP_002253.1	natural killer cells antigen CD94 isoform 1 [Homo sapiens] >ref\|NP_001107868.1\| natural killer cells antigen CD94 isoform 1 [Homo sapiens]	18.5	206	2%	10302	100%
1DQL_H	Chain H, Crystal Structure Of An Unliganded (Native) Fv From A Human Igm Anti-Peptide Antibody	18.5	82.5	1%	10302	66%
1DQL_L	Chain L, Crystal Structure Of An Unliganded (Native) Fv From A Human Igm Anti-Peptide Antibody	18.5	54.5	0%	10302	100%
NP_005400.1	C-X-C motif chemokine 11 precursor [Homo sapiens] >sp\|O14625.1\|CXL11_HUMAN RecName: Full=C-X-C motif chemokine 11; AltName: Full=Small-inducible cytokine B11; AltName: Full=Interferon-inducible T-cell alpha chemoattractant; Short=I-TAC; AltName: Full=Interferon gamma-inducible protein 9; Short=IP-9; AltName: Full=H174; AltName: Full=Beta-R1; Flags: Precursor	18.5	100	1%	10302	100%
1QR1_A	Chain A, Poor Binding Of A Her-2NEU EPITOPE (GP2) TO HLA-A2.1 Is Due To A Lack Of Interactions In The Center Of The Peptide >pdb\|1QR1\|D Chain D, Poor Binding Of A Her-2NEU EPITOPE (GP2) TO HLA-A2.1 Is Due To A Lack Of Interactions In The Center Of The Peptide >pdb\|1I1Y\|A Chain A, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1I1Y\|D Chain D, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1I1F\|A Chain A, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1I1F\|D Chain D, Crystal Structure Of Human Class I Mhc (Hla-A2.1) Complexed With Beta 2-Microglobulin And Hiv-Rt Variant Peptide I1y >pdb\|1DUY\|A Chain A, Crystal Structure Of Hla-A0201OCTAMERIC TAX PEPTIDE Complex >pdb\|1DUY\|D Chain D, Crystal Structure Of Hla-A0201OCTAMERIC TAX PEPTIDE Complex >pdb\|1DUZ\|A Chain A, Human Class I Histocompatibility Antigen (Hla-A 0201) In Complex With A Nonameric Peptide From Htlv-1 Tax Protein >pdb\|1DUZ\|D Chain D, Human Class I Histocompatibility Antigen (Hla-A 0201) In Complex With A Nonameric Peptide From Htlv-1 Tax Protein >pdb\|1IM3\|A Chain A, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM3\|E Chain E, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM3\|I Chain I, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1IM3\|M Chain M, Crystal Structure Of The Human Cytomegalovirus Protein Us2 Bound To The Mhc Class I Molecule Hla-A2TAX >pdb\|1I4F\|A Chain A, Crystal Structure Of Hla-A0201MAGE-A4-Peptide Complex >pdb\|1JF1\|A Chain A, Crystal Structure Of Hla-A20201 In Complex With A Decameric Altered Peptide Ligand From The Mart-1MELAN-A >pdb\|1JHT\|A Chain A, Crystal Structure Of Hla-A20201 In Complex With A Nonameric Altered Peptide Ligand (Algigiltv) From The Mart- 1MELAN-A. >pdb\|1I7R\|A Chain A, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1058 >pdb\|1I7R\|D Chain D, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1058 >pdb\|1I7T\|A Chain A, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-5v >pdb\|1I7T\|D Chain D, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-5v >pdb\|1I7U\|A Chain A, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-6v >pdb\|1I7U\|D Chain D, Crystal Structure Of Class I Mhc A2 In Complex With Peptide P1049-6v >pdb\|1EEY\|A Chain A, Crystal Structure Determination Of Hla A2 Complexed To Peptide Gp2 With The Substitution (I2lV5LL9V) >pdb\|1EEY\|D Chain D, Crystal Structure Determination Of Hla A2 Complexed To Peptide Gp2 With The Substitution (I2lV5LL9V) >pdb\|1EEZ\|A Chain A, Crystal Structure Determination Of Hla-A2.1 Complexed To Gp2 Peptide Variant(I2lV5L) >pdb\|1EEZ\|D Chain D, Crystal Structure Determination Of Hla-A2.1 Complexed To Gp2 Peptide Variant(I2lV5L) >pdb\|1LP9\|A Chain A, Xenoreactive Complex Ahiii 12.2 Tcr Bound To P1049HLA-A2.1 >pdb\|1LP9\|H Chain H, Xenoreactive Complex Ahiii 12.2 Tcr Bound To P1049HLA-A2.1 >pdb\|1TVB\|A Chain A, Crystal Structure Of Melanoma Antigen Gp100(209-217) Bound To Human Class I Mhc Hla-A2 >pdb\|1TVB\|D Chain D, Crystal Structure Of Melanoma Antigen Gp100(209-217) Bound To Human Class I Mhc Hla-A2 >pdb\|1TVH\|A Chain A, Crystal Structure Of Modified Melanoma Antigen Gp100(209- T2m) Bound To Human Class I Mhc Hla-A2 >pdb\|1TVH\|D Chain D, Crystal Structure Of Modified Melanoma Antigen Gp100(209- T2m) Bound To Human Class I Mhc Hla-A2 >pdb\|1S8D\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-3a >pdb\|1T1W\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-3f6i8v >pdb\|1T1X\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-4l >pdb\|1T1Y\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-5v >pdb\|1T1Z\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-6a >pdb\|1T20\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9-6i >pdb\|1T21\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9, Monoclinic Crystal >pdb\|1T22\|A Chain A, Structural Basis For Degenerate Recognition Of Hiv Peptide Variants By Cytotoxic Lymphocyte, Variant Sl9, Orthorhombic Crystal >pdb\|2F53\|A Chain A, Directed Evolution Of Human T-Cell Receptor Cdr2 Residues By Phage Display Dramatically Enhances Affinity For Cognate Peptide-Mhc Without Apparent Cross-Reactivity >pdb\|2GIT\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Modified Htlv- 1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|2GIT\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Modified Htlv- 1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|2GJ6\|A Chain A, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5k-4-[3-Indolyl]-Butyric Acid) Peptide >pdb\|2GT9\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Decameric Melan-AMART-1(26-35) Peptide >pdb\|2GT9\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Decameric Melan-AMART-1(26-35) Peptide >pdb\|2GTW\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A27l Substitution >pdb\|2GTW\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A27l Substitution >pdb\|2GTZ\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A28l Substitution >pdb\|2GTZ\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Nonameric Melan-AMART-1(27-35) Peptide Having A28l Substitution >pdb\|2GUO\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Native Nonameric Melan-AMART-1(27-35) Peptide >pdb\|2GUO\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Native Nonameric Melan-AMART-1(27-35) Peptide >pdb\|3BH9\|A Chain A, Crystal Structure Of Rty Phosphopeptide Bound To Human Class I Mhc Hla-A2 >pdb\|3FQN\|A Chain A, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQR\|A Chain A, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQT\|A Chain A, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQU\|A Chain A, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQW\|A Chain A, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3FQX\|A Chain A, Phosphorylation Of Self-Peptides Alters Human Leukocyte Antigen Class I-Restricted Antigen Presentation And Generates Tumor Specific Epitopes >pdb\|3D39\|A Chain A, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(4-Fluorophenylalanine)) Peptide >pdb\|3D3V\|A Chain A, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Modified Htlv-1 Tax (Y5(3,4-Difluorophenylalanine)) Peptide >pdb\|3GIV\|A Chain A, Antigen Processing Influences Hiv-Specific Cytotoxic T Lymphocyte Immunodominance >pdb\|3GIV\|D Chain D, Antigen Processing Influences Hiv-Specific Cytotoxic T Lymphocyte Immunodominance >pdb\|3H7B\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Tel1p Peptide >pdb\|3H7B\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Tel1p Peptide >pdb\|3H9S\|A Chain A, The Complex Between Tcr A6 And Human Class I Mhc Hla-A2 With The Bound Tel1p Peptide >pdb\|3KLA\|A Chain A, Ca2+ Release From The Endoplasmic Reticulum Of Ny-Eso-1 Specific T Cells Is Modulated By The Affinity Of T Cell Receptor And By The Use Of The Cd8 Co-Receptor >pdb\|3KLA\|D Chain D, Ca2+ Release From The Endoplasmic Reticulum Of Ny-Eso-1 Specific T Cells Is Modulated By The Affinity Of T Cell Receptor And By The Use Of The Cd8 Co-Receptor >pdb\|2X4N\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Residual Fragments Of A Photocleavable Peptide That Is Cleaved Upon Uv-Light Treatment >pdb\|2X4N\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Residual Fragments Of A Photocleavable Peptide That Is Cleaved Upon Uv-Light Treatment >pdb\|2X4O\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Envelope Peptide Env120-128 >pdb\|2X4O\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Envelope Peptide Env120-128 >pdb\|2X4P\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4P\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4Q\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4Q\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Photocleavable Peptide >pdb\|2X4R\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Cytomegalovirus (Cmv) Pp65 Epitope >pdb\|2X4R\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Cytomegalovirus (Cmv) Pp65 Epitope >pdb\|2X4S\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peptide Representing The Epitope Of The H5n1 (Avian Flu) Nucleoprotein >pdb\|2X4S\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peptide Representing The Epitope Of The H5n1 (Avian Flu) Nucleoprotein >pdb\|2X4T\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peiodate-Cleavable Peptide >pdb\|2X4T\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To A Peiodate-Cleavable Peptide >pdb\|2X4U\|A Chain A, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Peptide Rt468-476 >pdb\|2X4U\|D Chain D, Crystal Structure Of Mhc Class I Hla-A2.1 Bound To Hiv-1 Peptide Rt468-476 >pdb\|3MGO\|A Chain A, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGO\|D Chain D, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGO\|G Chain G, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGO\|J Chain J, Crystal Structure Of A H5-Specific Ctl Epitope Derived From Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|A Chain A, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|D Chain D, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|G Chain G, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3MGT\|J Chain J, Crystal Structure Of A H5-Specific Ctl Epitope Variant Deriv H5n1 Influenza Virus In Complex With Hla-A0201 >pdb\|3I6G\|A Chain A, Newly Identified Epitope Mn2 From Sars-Cov M Protein Complex Withhla-A0201 >pdb\|3I6G\|D Chain D, Newly Identified Epitope Mn2 From Sars-Cov M Protein Complex Withhla-A0201 >pdb\|3I6K\|A Chain A, Newly Identified Epitope From Sars-Cov Membrane Protein Comp Hla-A0201 >pdb\|3I6K\|E Chain E, Newly Identified Epitope From Sars-Cov Membrane Protein Comp Hla-A0201 >pdb\|3HPJ\|A Chain A, Human Class I Mhc Hla-A2 In Complex With The Wt-1 (126-134) Peptide >pdb\|3HPJ\|D Chain D, Human Class I Mhc Hla-A2 In Complex With The Wt-1 (126-134) Peptide	18.5	117	1%	10302	100%
1QA9_A	Chain A, Structure Of A Heterophilic Adhesion Complex Between The Human Cd2 And Cd58(Lfa-3) Counter-Receptors >pdb\|1QA9\|C Chain C, Structure Of A Heterophilic Adhesion Complex Between The Human Cd2 And Cd58(Lfa-3) Counter-Receptors	18.5	82.9	1%	10302	70%
CAC94944.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.5	85.1	1%	10302	83%
CAC48315.1	T-cell receptor beta chain [Homo sapiens]	18.5	65.3	0%	10302	83%
1HLA_A	Chain A, Structure Of The Human Class I Histocompatibility Antigen, Hla-A2 >pdb\|3HLA\|A Chain A, Human Class I Histocompatibility Antigen A2.1	18.5	117	1%	10302	100%
1QSF_A	Chain A, Structure Of A6-Tcr Bound To Hla-A2 Complexed With Altered Htlv-1 Tax Peptide Y8a	18.5	117	1%	10302	100%
1JPS_L	Chain L, Crystal Structure Of Tissue Factor In Complex With Humanized Fab D3h44 >pdb\|1JPT\|L Chain L, Crystal Structure Of Fab D3h44	18.5	240	4%	10302	100%
NP_665807.1	myotrophin [Homo sapiens]	18.5	103	1%	10302	75%
NP_569709.1	engulfment and cell motility protein 1 isoform 2 [Homo sapiens] >ref\|NP_001034548.1\| engulfment and cell motility protein 1 isoform 2 [Homo sapiens]	18.5	214	4%	10302	100%
NP_003330.1	ubiquitin-conjugating enzyme E2 D2 isoform 1 [Homo sapiens] >sp\|P62837.1\|UB2D2_HUMAN RecName: Full=Ubiquitin-conjugating enzyme E2 D2; AltName: Full=Ubiquitin-protein ligase D2; AltName: Full=Ubiquitin carrier protein D2; AltName: Full=Ubiquitin-conjugating enzyme E2-17 kDa 2; AltName: Full=Ubiquitin-conjugating enzyme E2(17)KB 2 >gb\|AAA91460.1\| UbcH5B [Homo sapiens]	17.6	100	1%	11989	83%
3KZJ_A	Chain A, Structure Of Complement Factor H Variant R1203a	17.6	113	1%	12480	80%
3KXV_A	Chain A, Structure Of Complement Factor H Variant Q1139a	17.6	129	1%	12480	80%
2BZM_A	Chain A, Solution Structure Of The Primary Host Recognition Region Of Complement Factor H	17.6	113	1%	12632	80%
2G7I_A	Chain A, Structure Of Human Complement Factor H Carboxyl Terminal Domains 19-20: A Basis For Atypical Hemolytic Uremic Syndrome	17.6	113	1%	12783	80%
NP_862821.1	ubiquitin-conjugating enzyme E2 D2 isoform 2 [Homo sapiens]	17.6	66.6	0%	13042	83%
3MOP_A	Chain A, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|B Chain B, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|C Chain C, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|D Chain D, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|E Chain E, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2 >pdb\|3MOP\|F Chain F, The Ternary Death Domain Complex Of Myd88, Irak4, And Irak2	18.0	50.7	0%	13823	100%
2X5Y_A	Chain A, Human Zc3hav1 (Artd13), C-Terminal Domain	18.0	99.7	1%	13823	100%
3KYO_A	Chain A, Crystal Structure Of Hla-G Presenting Klpaqfyil Peptide >pdb\|3KYO\|C Chain C, Crystal Structure Of Hla-G Presenting Klpaqfyil Peptide	18.0	152	2%	13823	100%
3KYN_A	Chain A, Crystal Structure Of Hla-G Presenting Kgppaaltl Peptide	18.0	152	2%	13823	100%
3IU3_I	Chain I, Crystal Structure Of The Fab Fragment Of Therapeutic Antibody Basiliximab In Complex With Il-2ra (Cd25) Ectodomain >pdb\|3IU3\|J Chain J, Crystal Structure Of The Fab Fragment Of Therapeutic Antibody Basiliximab In Complex With Il-2ra (Cd25) Ectodomain >pdb\|3IU3\|K Chain K, Crystal Structure Of The Fab Fragment Of Therapeutic Antibody Basiliximab In Complex With Il-2ra (Cd25) Ectodomain	18.0	117	1%	13823	80%
3H3P_H	Chain H, Crystal Structure Of Hiv Epitope-Scaffold 4e10 Fv Complex >pdb\|3H3P\|I Chain I, Crystal Structure Of Hiv Epitope-Scaffold 4e10 Fv Complex	18.0	18.0	0%	13823	71%
ACN63294.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63310.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63316.1\| B cell antibody heavy chain variable region [Homo sapiens]	18.0	49.8	0%	13823	100%
ACN63286.1	B cell antibody heavy chain variable region [Homo sapiens]	18.0	166	1%	13823	85%
ACN63276.1	B cell antibody heavy chain variable region [Homo sapiens]	18.0	149	1%	13823	85%
ACN63270.1	B cell antibody heavy chain variable region [Homo sapiens]	18.0	166	1%	13823	85%
ACN63264.1	B cell antibody heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
ACN63262.1	B cell antibody heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
ACN63258.1	B cell antibody heavy chain variable region [Homo sapiens]	18.0	50.7	0%	13823	80%
ACN63256.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63257.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63263.1\| B cell antibody heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
ACJ37286.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.0	133	2%	13823	85%
ACJ37274.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.0	50.7	1%	13823	66%
ACJ37272.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.0	136	1%	13823	83%
ACJ37259.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.0	150	2%	13823	100%
ACJ37257.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.0	114	1%	13823	85%
ACJ37256.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	18.0	49.8	0%	13823	100%
ACJ37251.1	anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]	18.0	150	1%	13823	100%
3DJ9_A	Chain A, Crytal Structure Of An Isolated, Unglycosylated Antibody Ch2 Domain	18.0	82.9	0%	13823	100%
CAR63063.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	33.9	0%	13823	80%
CAR63049.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	85.1	0%	13823	100%
CAR63047.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.9	1%	13823	66%
CAR63044.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	52.0	0%	13823	80%
CAR63036.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	66%
CAR63024.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	51.5	0%	13823	83%
CAR62981.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	71%
CAR62971.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	69.1	0%	13823	100%
CAR62965.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	0%	13823	100%
CAR62936.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
CAR62935.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	34.8	0%	13823	83%
CAR62927.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	103	1%	13823	100%
CAR62920.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	114	2%	13823	83%
CAR62919.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	52.0	0%	13823	71%
CAR62905.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	84.6	1%	13823	83%
CAR62900.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	18.0	0%	13823	50%
CAR62870.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	115	1%	13823	100%
CAR62864.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	104	2%	13823	83%
CAR62863.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	96.7	1%	13823	100%
CAR62862.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	84.2	1%	13823	80%
CAR62861.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
CAR62852.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.9	1%	13823	100%
CAR62843.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	35.2	0%	13823	83%
CAR62835.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	49.8	0%	13823	80%
CAR62812.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
CAR62777.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.9	1%	13823	80%
CAR62776.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	85.5	1%	13823	100%
CAR62774.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
CAR62771.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	84.6	2%	13823	71%
CAR62762.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	85.1	1%	13823	66%
CAR62750.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.8	1%	13823	100%
CAR62740.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	52.0	0%	13823	80%
CAR62734.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	85.1	1%	13823	100%
CAR62715.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	85.5	1%	13823	83%
CAR62703.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	82.5	1%	13823	80%
CAR62667.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	67.9	1%	13823	83%
CAR62656.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	51.1	0%	13823	71%
CAR62655.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	98.0	1%	13823	80%
CAR62642.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	67.0	0%	13823	83%
CAR62620.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.0	1%	13823	66%
CAR62618.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.2	0%	13823	80%
CAR62617.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
CAR62601.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	51.1	0%	13823	83%
CAR62598.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	51.1	0%	13823	83%
CAR62597.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	84.6	1%	13823	83%
CAR62595.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	68.7	0%	13823	83%
CAR62593.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	68.7	0%	13823	83%
CAR62591.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	51.1	0%	13823	83%
CAR62590.1	immunoglobulin lambda chain variable region [Homo sapiens]	18.0	51.1	0%	13823	83%
CAR62573.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	33.9	0%	13823	71%
CAR62569.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	66%
CAR62554.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	80%
CAR62553.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.8	0%	13823	83%
2RFX_A	Chain A, Crystal Structure Of Hla-B5701, Presenting The Self Peptide, Lsspvtksf	18.0	99.3	1%	13823	83%
2VM6_A	Chain A, Human Bcl2-A1 In Complex With Bim-Bh3 Peptide	18.0	131	1%	13823	83%
2VH5_H	Chain H, Crystal Structure Of Hras(G12v) - Anti-Ras Fv (Disulfide Free Mutant) Complex	18.0	85.9	1%	13823	100%
2QZF_A	Chain A, Scr1 Of Daf From 1ojv Fitted Into Cryoem Density	18.0	51.1	0%	13823	80%
1GKG_A	Chain A, Structure Determination And Rational Mutagenesis Reveal Binding Surface Of Immune Adherence Receptor, Cr1 (Cd35)	18.0	51.1	0%	13823	100%
2UX2_A	Chain A, High Resolution Structure Of Human Cd59 >pdb\|2UX2\|B Chain B, High Resolution Structure Of Human Cd59 >pdb\|2UX2\|C Chain C, High Resolution Structure Of Human Cd59	18.0	18.0	0%	13823	83%
ABR67891.1	T cell receptor delta chain variable region [Homo sapiens]	18.0	33.9	0%	13823	83%
ABR37247.1	T-cell receptor beta chain [Homo sapiens]	18.0	51.1	0%	13823	80%
2DYP_A	Chain A, Crystal Structure Of Lilrb2(Lir2ILT4CD85D) COMPLEXED WITH Hla-G	18.0	152	2%	13823	100%
2HJK_A	Chain A, Crystal Structure Of Hla-B5703 And Hiv-1 Peptide >pdb\|2HJL\|A Chain A, Crystal Structure Of Hla-B5703 And Hiv-1 Peptide	18.0	99.3	1%	13823	83%
CAL48284.1	rhesus blood group D antigen [Homo sapiens]	18.0	82.1	0%	13823	100%
ABG38454.1	immunglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
ABG38453.1	immunglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
ABG38464.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38465.1\| immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38466.1\| immunglobulin heavy chain variable region [Homo sapiens]	18.0	95.5	1%	13823	100%
ABG38446.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38447.1\| immunglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
ABG38443.1	immunglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
ABG38434.1	immunglobulin heavy chain variable region [Homo sapiens]	18.0	98.8	1%	13823	100%
ABG38445.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38448.1\| immunglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
ABG38440.1	immunglobulin heavy chain variable region [Homo sapiens]	18.0	65.8	0%	13823	100%
ABG38425.1	immunglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
ABG38410.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	51.1	0%	13823	100%
ABG38407.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	80.8	0%	13823	85%
ABG38418.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	84.2	1%	13823	66%
ABG38393.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	80.8	0%	13823	85%
ABG38414.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	82.5	1%	13823	100%
ABG38392.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	49.4	0%	13823	85%
ABG38351.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	81.7	1%	13823	100%
ABG38384.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	100%
ABG38335.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	98.0	1%	13823	100%
ABG38334.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	81.7	1%	13823	100%
ABG38365.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	81.7	1%	13823	100%
ABG38369.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	87.6	1%	13823	100%
ABG38376.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	97.6	1%	13823	100%
CAJ90644.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	85.1	1%	13823	83%
CAJ90635.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	99.7	1%	13823	100%
CAJ90630.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
2D31_A	Chain A, Crystal Structure Of Disulfide-Linked Hla-G Dimer >pdb\|2D31\|D Chain D, Crystal Structure Of Disulfide-Linked Hla-G Dimer	18.0	135	1%	13823	100%
NP_001293.2	cortistatin preproprotein [Homo sapiens]	18.0	82.5	1%	13823	100%
AAL04516.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	18.0	97.6	1%	13823	100%
AAD47068.1	anti-HLA-A2/A28 immunoglobulin light chain variable region [Homo sapiens]	18.0	67.9	0%	13823	100%
AAC41990.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	18.0	97.6	1%	13823	100%
AAA85189.1	immunoglobulin rearranged heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	100%
AAL57838.1	anti-hepatitis B surface antigen immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.5	0%	13823	100%
AAC61608.1	immunoglobulin variable region used by the ITC52 kappa light chain (subgroup V kappa IIIb) (anti-cytomeglovirus glycoprotein B [Homo sapiens]	18.0	98.8	1%	13823	100%
ABG38353.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
AAA52857.1	Ig mu-chain Vv-D-J6-region [Homo sapiens]	18.0	82.1	1%	13823	85%
AAL04523.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
AAL57837.1	anti-hepatitis B surface antigen immunoglobulin heavy chain variable region [Homo sapiens]	18.0	96.7	1%	13823	100%
AAL65229.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
AAC43029.1	anti-mucin1 light chain variable region [Homo sapiens]	18.0	34.8	0%	13823	100%
AAY16589.2	immunoglobulin kappa light chain [Homo sapiens]	18.0	98.8	1%	13823	100%
AAZ32306.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	98.8	1%	13823	100%
AAZ32315.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	114	1%	13823	100%
AAY16591.2	immunoglobulin kappa light chain [Homo sapiens]	18.0	116	1%	13823	100%
AAY57133.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY57151.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	85.5	1%	13823	100%
AAY57111.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	146	2%	13823	100%
AAY57154.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.5	1%	13823	66%
AAY57155.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	101	1%	13823	100%
AAY57131.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.5	1%	13823	100%
AAY57142.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.8	1%	13823	100%
AAY57145.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.0	1%	13823	66%
AAY57152.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
AAY57138.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	117	2%	13823	100%
AAY57153.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	101	1%	13823	100%
AAY57146.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	117	1%	13823	100%
AAY57147.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	117	1%	13823	100%
AAY57149.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	100%
AAY57089.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	98.0	1%	13823	100%
AAY57098.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
AAY57091.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	100%
AAY57077.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY57094.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
AAY57088.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	98.0	1%	13823	100%
AAY57082.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY57068.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	101	1%	13823	100%
AAY57096.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	117	1%	13823	100%
AAY57087.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY57076.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
AAY57067.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY57090.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.5	1%	13823	66%
AAY57095.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	113	1%	13823	100%
AAY57071.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY57081.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.8	1%	13823	100%
AAY57075.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	99.3	1%	13823	100%
AAY33409.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	115	1%	13823	66%
AAY33441.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	68.7	0%	13823	100%
AAY33453.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	97.6	1%	13823	66%
AAY33416.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	84.2	1%	13823	66%
AAY33452.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	84.2	1%	13823	66%
AAY33411.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens] >gb\|AAY33414.1\| anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	84.2	1%	13823	66%
AAY33430.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	68.7	1%	13823	100%
AAY33439.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	70.0	1%	13823	83%
AAY33455.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
AAY33423.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	67.9	0%	13823	100%
AAY33447.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	100	1%	13823	66%
AAY33407.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	100	1%	13823	100%
AAY33405.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
AAY33276.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	101	1%	13823	100%
AAY33205.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	84.2	1%	13823	100%
AAY33360.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	34.8	0%	13823	100%
AAY33202.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	85.5	1%	13823	80%
AAY33196.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33254.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33378.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	99.7	1%	13823	83%
AAY33296.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.9	1%	13823	100%
AAY33282.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33248.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
AAY33379.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	68.3	1%	13823	66%
AAY33197.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33213.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33220.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33221.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33253.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	84.2	1%	13823	100%
AAY33247.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	1%	13823	83%
AAY33314.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33246.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33216.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	86.8	1%	13823	66%
AAY33343.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	66.2	1%	13823	100%
AAY33392.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	54.1	1%	13823	100%
AAY33244.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33237.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	101	1%	13823	100%
AAY33333.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33334.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33277.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	98.4	1%	13823	100%
AAY33330.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.1	0%	13823	66%
AAY33214.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33302.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33315.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.0	1%	13823	66%
AAY33257.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33367.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	50.3	0%	13823	100%
AAY33271.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33241.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33303.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33295.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	99.3	1%	13823	100%
AAY33342.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	54.1	1%	13823	100%
AAY33283.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	83.8	1%	13823	83%
AAY33263.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	35.2	0%	13823	66%
AAY33210.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33224.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33332.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33299.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33245.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33306.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	51.5	0%	13823	80%
AAY33251.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.9	1%	13823	100%
AAY33252.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	131	1%	13823	85%
AAY33198.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33347.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
AAY33310.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33319.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33318.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33346.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
AAY33212.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33258.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33215.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33217.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33279.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33374.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	100	1%	13823	66%
AAY33218.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33316.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33209.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
AAY33317.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.7	1%	13823	66%
AAY33193.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	101	1%	13823	100%
AAY33300.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
AAY33243.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	85.5	1%	13823	100%
AAY33206.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33337.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	18.0	84.2	1%	13823	100%
AAY33357.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	49.4	0%	13823	85%
AAY16623.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	114	1%	13823	80%
AAY16607.1	immunoglobulin lambda light chain [Homo sapiens]	18.0	82.9	1%	13823	83%
AAY16634.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	113	1%	13823	100%
AAY16625.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	114	1%	13823	80%
AAY16614.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	132	2%	13823	80%
AAY16590.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	99.3	1%	13823	100%
AAY16598.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	99.3	1%	13823	80%
AAL04530.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	18.0	98.4	1%	13823	85%
NP_006108.2	peroxisomal 3,2-trans-enoyl-CoA isomerase isoform 1 [Homo sapiens] >ref\|NP_001159482.1\| peroxisomal 3,2-trans-enoyl-CoA isomerase isoform 1 [Homo sapiens]	18.0	201	2%	13823	80%
AAL04532.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	18.0	98.8	2%	13823	100%
NP_005669.2	SNRPN upstream reading frame protein [Homo sapiens] >ref\|NP_073715.1\| SNRPN upstream reading frame protein [Homo sapiens]	18.0	84.6	1%	13823	83%
AAB25910.2	anti-Hib capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	18.0	100	1%	13823	83%
2A55_A	Chain A, Solution Structure Of The Two N-Terminal Ccp Modules Of C4b- Binding Protein (C4bp) Alpha-Chain	18.0	85.5	0%	13823	100%
CAJ00290.1	T-cell receptor alpha chain [Homo sapiens]	18.0	33.9	0%	13823	80%
CAJ00285.1	T-cell receptor alpha chain [Homo sapiens]	18.0	18.0	0%	13823	80%
2BVO_A	Chain A, Structures Of Three Hiv-1 Hla-B5703-Peptide Complexes And Identification Of Related Hlas Potentially Associated With Long-Term Non-Progression >pdb\|2BVP\|A Chain A, Structures Of Three Hiv-1 Hla-B5703-Peptide Complexes And Identification Of Related Hlas Potentially Associated With Long-Term Non-Progression >pdb\|2BVQ\|A Chain A, Structures Of Three Hiv-1 Hla-B5703-Peptide Complexes And Identification Of Related Hlas Potentially Associated With Long-Term Non-Progression	18.0	99.3	1%	13823	83%
1Z92_B	Chain B, Structure Of Interleukin-2 With Its Alpha Receptor	18.0	99.7	1%	13823	80%
1WT5_C	Chain C, The Crystal Structure Of A Humanized Antibody Fv 528 >pdb\|1WT5\|D Chain D, The Crystal Structure Of A Humanized Antibody Fv 528	18.0	64.9	0%	13823	85%
1YDP_A	Chain A, 1.9a Crystal Structure Of Hla-G	18.0	152	2%	13823	100%
CAG29715.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62722.1\| immunoglobulin heavy chain variable region [Homo sapiens]	18.0	68.3	1%	13823	80%
CAG29708.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAR62726.1\| immunoglobulin heavy chain variable region [Homo sapiens]	18.0	67.0	1%	13823	83%
CAG29706.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	67.9	0%	13823	100%
CAE54369.1	immunoglobulin heavy chain [Homo sapiens]	18.0	66.6	0%	13823	100%
CAD89240.1	immunoglobulin heavy chain [Homo sapiens]	18.0	82.1	1%	13823	80%
CAD89261.1	immunoglobulin kappa light chain [Homo sapiens]	18.0	33.5	0%	13823	83%
CAD88662.1	immunoglobulin heavy chain [Homo sapiens]	18.0	83.8	0%	13823	100%
CAD88730.1	immunoglobulin heavy chain [Homo sapiens]	18.0	82.5	1%	13823	100%
CAD88731.1	immunoglobulin heavy chain [Homo sapiens]	18.0	66.6	0%	13823	100%
CAD88711.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.0	84.6	1%	13823	83%
CAD88757.1	immunoglobulin heavy chain [Homo sapiens]	18.0	51.1	0%	13823	100%
CAD88661.1	immunoglobulin heavy chain [Homo sapiens]	18.0	52.0	0%	13823	100%
CAD88738.1	immunoglobulin heavy chain [Homo sapiens]	18.0	98.0	1%	13823	100%
CAD88679.1	immunoglobulin heavy chain [Homo sapiens]	18.0	67.9	1%	13823	66%
CAC28892.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	83.4	1%	13823	100%
CAA66152.1	immunoglbulin heavy chain [Homo sapiens]	18.0	69.6	1%	13823	71%
1EGW_A	Chain A, Crystal Structure Of Mef2a Core Bound To Dna >pdb\|1EGW\|B Chain B, Crystal Structure Of Mef2a Core Bound To Dna >pdb\|1EGW\|C Chain C, Crystal Structure Of Mef2a Core Bound To Dna >pdb\|1EGW\|D Chain D, Crystal Structure Of Mef2a Core Bound To Dna	18.0	83.8	1%	13823	100%
CAC28903.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	33.5	0%	13823	66%
CAC03829.1	T-cell receptor beta chain [Homo sapiens]	18.0	49.4	1%	13823	66%
CAB51299.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	113	1%	13823	100%
1EGJ_A	Chain A, Domain 4 Of The Beta Common Chain In Complex With An Antibody	18.0	68.3	0%	13823	80%
CAC03792.1	T-cell receptor beta chain [Homo sapiens]	18.0	35.2	0%	13823	71%
1NFA_A	Chain A, Human Transcription Factor Nfatc Dna Binding Domain, Nmr, 10 Structures	18.0	81.2	2%	13823	80%
CAC28900.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
CAC03874.1	T-cell receptor beta chain [Homo sapiens]	18.0	33.9	0%	13823	71%
3EO1_C	Chain C, Structure Of The Fab Fragment Of Gc-1008 In Complex With Transforming Growth Factor-Beta 3 >pdb\|3EO1\|F Chain F, Structure Of The Fab Fragment Of Gc-1008 In Complex With Transforming Growth Factor-Beta 3 >pdb\|3EO1\|I Chain I, Structure Of The Fab Fragment Of Gc-1008 In Complex With Transforming Growth Factor-Beta 3 >pdb\|3EO1\|L Chain L, Structure Of The Fab Fragment Of Gc-1008 In Complex With Transforming Growth Factor-Beta 3	18.0	87.6	0%	13823	100%
CAC28894.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
CAB51298.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	82.1	1%	13823	80%
CAC28897.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	83.8	1%	13823	80%
CAC03759.1	T-cell receptor beta chain [Homo sapiens]	18.0	50.7	0%	13823	80%
CAC28895.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
CAB51301.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	80.8	0%	13823	100%
NP_689605.1	activator of 90 kDa heat shock protein ATPase homolog 2 [Homo sapiens]	18.0	164	1%	13823	83%
1GHQ_B	Chain B, Cr2-C3d Complex Structure >pdb\|1GHQ\|C Chain C, Cr2-C3d Complex Structure	18.0	67.0	0%	13823	80%
CAB46462.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	49.0	0%	13823	80%
CAC28889.1	immunoglobulin mu heavy chain variable region [Homo sapiens]	18.0	116	1%	13823	100%
CAB46469.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	85.1	1%	13823	100%
Q9NZH6.1	RecName: Full=Interleukin-1 family member 7; Short=IL-1F7; AltName: Full=Interleukin-1 zeta; Short=IL-1 zeta; AltName: Full=FIL1 zeta; AltName: Full=Interleukin-1 homolog 4; Short=IL-1H4; AltName: Full=Interleukin-1-related protein; Short=IL-1RP1; AltName: Full=IL-1X; Flags: Precursor >gb\|AAG14420.1\| interleukin-1-related protein long isoform a [Homo sapiens]	18.0	186	2%	13823	100%
CAB51297.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
BAA02465.1	HLA-DP antigen [Homo sapiens]	18.0	66.6	0%	13823	80%
CAC03955.1	T-cell receptor beta chain [Homo sapiens]	18.0	18.0	0%	13823	57%
CAB59316.1	TCR beta chain variable region [Homo sapiens]	18.0	50.7	0%	13823	80%
1CDQ_A	Chain A, Structure Of A Soluble, Glycosylated Form Of The Human Complement Regulatory Protein Cd59 >pdb\|1CDR\|A Chain A, Structure Of A Soluble, Glycosylated Form Of The Human Complement Regulatory Protein Cd59 >pdb\|1CDS\|A Chain A, Structure Of A Soluble, Glycosylated Form Of The Human Complement Regulatory Protein Cd59	18.0	18.0	0%	13823	83%
1E27_A	Chain A, Nonstandard Peptide Binding Of Hla-B5101 Complexed With Hiv Immunodominant Epitope Km1(Lppvvakei)	18.0	99.3	1%	13823	83%
CAB46449.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	83.8	1%	13823	85%
1DEE_B	Chain B, Crystal Structure At 2.7a Resolution Of A Complex Between A Staphylococcus Aureus Domain And A Fab Fragment Of A Human Igm Antibody >pdb\|1DEE\|D Chain D, Crystal Structure At 2.7a Resolution Of A Complex Between A Staphylococcus Aureus Domain And A Fab Fragment Of A Human Igm Antibody >pdb\|1DEE\|F Chain F, Crystal Structure At 2.7a Resolution Of A Complex Between A Staphylococcus Aureus Domain And A Fab Fragment Of A Human Igm Antibody	18.0	182	2%	13823	100%
CAC28898.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
CAC28899.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
S69898	Ig kappa chain V region (clone RFSJ5L), rheumatoid factor - human >emb\|CAA84375.1\| Ig kappa chain, variable region, rheumatoid factor [Homo sapiens]	18.0	36.1	0%	13823	100%
NP_001092755.1	prothymosin alpha isoform 1 [Homo sapiens] >sp\|P06454.2\|PTMA_HUMAN RecName: Full=Prothymosin alpha; Contains: RecName: Full=Thymosin alpha-1	18.0	49.8	0%	13823	66%
1LY2_A	Chain A, Crystal Structure Of Unliganded Human Cd21 Scr1-Scr2 (Complement Receptor Type 2)	18.0	67.0	0%	13823	80%
CAC03965.1	T-cell receptor beta chain [Homo sapiens]	18.0	66.2	1%	13823	83%
CAC03791.1	T-cell receptor beta chain [Homo sapiens]	18.0	36.1	0%	13823	57%
CAC28908.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
CAB46470.1	immunoglobulin light chain variable region [Homo sapiens]	18.0	84.2	1%	13823	66%
CAB51293.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	64.9	0%	13823	85%
NP_057472.2	T-cell receptor-associated transmembrane adapter 1 [Homo sapiens]	18.0	131	1%	13823	83%
CAC28001.1	immunoglobulin lambda light chain variable region [Homo sapiens]	18.0	100	1%	13823	71%
CAB51731.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	99.7	1%	13823	100%
CAB46477.1	immunoglobulin light chain varaible region [Homo sapiens]	18.0	98.0	1%	13823	100%
NP_002814.3	prothymosin alpha isoform 2 [Homo sapiens]	18.0	49.8	0%	13823	66%
CAB59421.1	T cell receptor beta chain variable region [Homo sapiens]	18.0	65.8	0%	13823	80%
CAB51723.1	immunoglobulin heavy chain variable region [Homo sapiens]	18.0	18.0	0%	13823	83%
CAB59391.1	T cell receptor beta chain variable region [Homo sapiens]	18.0	67.0	0%	13823	100%
CAC28885.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	66.6	0%	13823	100%
CAC28902.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	82.1	1%	13823	100%
CAC48318.1	T-cell receptor beta chain [Homo sapiens]	18.0	50.3	0%	13823	80%
CAC03803.1	T-cell receptor beta chain [Homo sapiens]	18.0	18.0	0%	13823	57%
CAC28910.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	18.0	68.7	0%	13823	100%
AAY33482.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	18.0	84.2	1%	13823	66%
CAB51295.1	immunoglobulin kappa chain variable region [Homo sapiens]	18.0	35.2	0%	13823	100%
2X57_A	Chain A, Crystal Structure Of The Extracellular Domain Of Human Vasoactive Intestinal Polypeptide Receptor 2 >pdb\|2X57\|B Chain B, Crystal Structure Of The Extracellular Domain Of Human Vasoactive Intestinal Polypeptide Receptor 2 >pdb\|2X57\|C Chain C, Crystal Structure Of The Extracellular Domain Of Human Vasoactive Intestinal Polypeptide Receptor 2	17.6	98.8	1%	18547	80%
3HQA_A	Chain A, Crystal Structure Of Human Desarg-C5a >pdb\|3HQA\|B Chain B, Crystal Structure Of Human Desarg-C5a >pdb\|3HQB\|A Chain A, Crystal Structure Of Human Desarg-C5a >pdb\|3HQB\|B Chain B, Crystal Structure Of Human Desarg-C5a	17.6	98.0	1%	18547	100%
2KLU_A	Chain A, Nmr Structure Of The Transmembrane And Cytoplasmic Domains Of Human Cd4	17.6	35.2	0%	18547	83%
ACN63337.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63338.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63340.1\| B cell antibody heavy chain variable region [Homo sapiens]	17.6	99.7	1%	18547	85%
ACN63331.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	67.5	1%	18547	83%
ACN63330.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	116	2%	18547	85%
ACN63328.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	100	1%	18547	85%
ACN63327.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	84.2	1%	18547	85%
ACN63323.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	99.7	1%	18547	85%
ACN63322.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63325.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63326.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63332.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63339.1\| B cell antibody heavy chain variable region [Homo sapiens]	17.6	84.2	1%	18547	85%
ACN63319.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	83.4	1%	18547	85%
ACN63284.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	116	1%	18547	100%
ACN63253.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	86.3	0%	18547	80%
ACN63251.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	100%
ACN63250.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	100%
ACN63241.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	100%
ACN63240.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	100%
ACN63234.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	65.3	0%	18547	80%
ACN63224.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	68.3	1%	18547	66%
ACN63219.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	68.3	1%	18547	66%
ACN63212.1	B cell antibody heavy chain variable region [Homo sapiens]	17.6	68.3	1%	18547	66%
ACN63207.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63211.1\| B cell antibody heavy chain variable region [Homo sapiens]	17.6	68.3	1%	18547	66%
ACJ37291.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	50.3	0%	18547	80%
ACJ37279.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	82.5	1%	18547	85%
ACJ37276.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	98.0	1%	18547	85%
ACJ37275.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	113	1%	18547	80%
ACJ37269.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	113	1%	18547	100%
ACJ37263.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	49.8	0%	18547	100%
ACJ37258.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.6	101	1%	18547	83%
CAR63060.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	64.9	1%	18547	62%
CAR63032.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	83.8	0%	18547	100%
CAR62992.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	50.7	0%	18547	85%
CAR62990.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	66.6	0%	18547	100%
CAR62984.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	51.1	0%	18547	80%
CAR62964.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	98.8	1%	18547	100%
CAR62957.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	34.8	0%	18547	100%
CAR62937.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	67.5	0%	18547	83%
CAR62928.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	67.9	0%	18547	83%
CAR62906.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	66.6	0%	18547	100%
CAR62885.1	immunoglobulin kappa chain variable region [Homo sapiens]	17.6	51.1	0%	18547	83%
CAR62839.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	48.6	0%	18547	80%
CAR62830.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	50.3	0%	18547	80%
CAR62784.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	66.6	0%	18547	83%
CAR62759.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	131	1%	18547	100%
CAR62699.1	immunoglobulin kappa chain variable region [Homo sapiens]	17.6	33.1	0%	18547	80%
CAR62644.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	49.0	0%	18547	71%
CAR62643.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	49.0	0%	18547	71%
CAR62612.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	85%
CAR62607.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	84.6	1%	18547	100%
CAR62596.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	50.7	0%	18547	71%
CAR62589.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	49.4	0%	18547	80%
CAR62585.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	34.8	0%	18547	83%
CAR62566.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	114	1%	18547	80%
2RLQ_A	Chain A, Nmr Structure Of Ccp Modules 2-3 Of Complement Factor H	17.6	50.3	0%	18547	80%
2RLP_A	Chain A, Nmr Structure Of Ccp Modules 1-2 Of Complement Factor H	17.6	50.3	0%	18547	80%
2NYZ_D	Chain D, Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The C- Chemokine Xcl1 >pdb\|2NYZ\|E Chain E, Viral Chemokine Binding Protein M3 From Murine Gammaherpesvirus68 In Complex With The C- Chemokine Xcl1	17.6	66.6	1%	18547	71%
2NZ7_A	Chain A, Crystal Structure Analysis Of Caspase-Recruitment Domain (Card) Of Nod1 >pdb\|2NZ7\|B Chain B, Crystal Structure Analysis Of Caspase-Recruitment Domain (Card) Of Nod1	17.6	50.3	0%	18547	66%
2QZD_A	Chain A, Fitted Structure Of Scr4 Of Daf Into Cryoem Density	17.6	50.3	0%	18547	80%
2EHF_A	Chain A, Solution Structure Of The Third Sushi Domain From Human Cub And Sushi Domain-Containing Protein 1	17.6	33.5	0%	18547	80%
2GOX_A	Chain A, Crystal Structure Of Efb-C C3D COMPLEX >pdb\|2GOX\|C Chain C, Crystal Structure Of Efb-C C3D COMPLEX >pdb\|2NOJ\|A Chain A, Crystal Structure Of Ehp C3D COMPLEX >pdb\|2NOJ\|C Chain C, Crystal Structure Of Ehp C3D COMPLEX >pdb\|2NOJ\|E Chain E, Crystal Structure Of Ehp C3D COMPLEX >pdb\|2NOJ\|G Chain G, Crystal Structure Of Ehp C3D COMPLEX >pdb\|3D5R\|A Chain A, Crystal Structure Of Efb-C (N138a) C3D COMPLEX >pdb\|3D5R\|B Chain B, Crystal Structure Of Efb-C (N138a) C3D COMPLEX >pdb\|3D5S\|A Chain A, Crystal Structure Of Efb-C (R131a) C3D COMPLEX >pdb\|3D5S\|B Chain B, Crystal Structure Of Efb-C (R131a) C3D COMPLEX	17.6	226	2%	18547	100%
2J61_A	Chain A, L-Ficolin Complexed To N-Acetylglucosamine (Forme C)	17.6	84.6	1%	18547	83%
ABG38422.1	immunglobulin heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	66%
ABG38387.1	immunoglobulin light chain variable region [Homo sapiens]	17.6	50.3	0%	18547	83%
ABG38386.1	immunoglobulin light chain variable region [Homo sapiens]	17.6	130	2%	18547	80%
ABG38367.1	immunoglobulin light chain variable region [Homo sapiens]	17.6	50.3	0%	18547	83%
ABG38371.1	immunoglobulin light chain variable region [Homo sapiens]	17.6	48.6	0%	18547	80%
CAJ14091.1	T-cell receptor beta chain [Homo sapiens]	17.6	17.6	0%	18547	71%
CAE47424.2	HLA class I antigen [Homo sapiens]	17.6	81.7	1%	18547	100%
AAL47716.1	nectin-1 [Homo sapiens]	17.6	34.4	0%	18547	100%
AAL47715.1	nectin-1 [Homo sapiens]	17.6	34.4	0%	18547	100%
CAA49705.1	nicotinic acetylcholine receptor alpha subunit [Homo sapiens]	17.6	49.0	0%	18547	66%
2CR2_A	Chain A, Solution Structure Of N-Terminal Domain Of Speckle-Type Poz Protein	17.6	67.9	0%	18547	83%
AAP42153.1	immune receptor expressed on myeloid cells splice variant 2 [Homo sapiens]	17.6	97.6	1%	18547	100%
AAZ32307.1	immunoglobulin kappa light chain [Homo sapiens]	17.6	65.8	0%	18547	80%
AAY33468.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.6	65.8	0%	18547	83%
AAY33440.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.6	51.1	0%	18547	100%
AAY33272.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	50.3	0%	18547	85%
AAY33340.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.6	35.2	0%	18547	100%
AAY33324.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	65.8	1%	18547	80%
AAY33345.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.6	99.3	1%	18547	80%
AAY33349.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.6	133	1%	18547	83%
AAY33225.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	81.2	1%	18547	80%
AAY33321.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	81.2	1%	18547	80%
AAY33322.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33326.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens] >gb\|AAY33328.1\| anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	81.2	1%	18547	80%
AAY33325.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	81.2	1%	18547	80%
AAY33323.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	97.6	1%	18547	80%
AAY33386.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.6	64.5	1%	18547	71%
AAY33289.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	34.8	0%	18547	83%
AAY33219.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	82.1	1%	18547	80%
AAY33327.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.6	81.2	1%	18547	80%
AAS59838.1	T-cell immune regulator 1 transcript variant 8 [Homo sapiens]	17.6	33.1	0%	18547	75%
AAS59836.1	T-cell immune regulator 1 transcript variant 6 [Homo sapiens]	17.6	34.8	0%	18547	100%
AAL04536.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	17.6	34.4	0%	18547	85%
Q6EEV6.2	RecName: Full=Small ubiquitin-related modifier 4; Short=SUMO-4; AltName: Full=Small ubiquitin-like protein 4; Flags: Precursor	17.6	51.5	0%	18547	100%
1W2S_A	Chain A, Solution Structure Of Cr2 Scr 1-2 In Its Complex With C3d By X-Ray Scattering	17.6	210	2%	18547	100%
CAG25966.1	killer cell immunoglobulin-like receptor [Homo sapiens]	17.6	100	1%	18547	80%
CAG29719.1	immunoglobulin kappa light chain [Homo sapiens]	17.6	34.4	0%	18547	80%
CAD89241.1	immunoglobulin heavy chain [Homo sapiens]	17.6	98.4	1%	18547	85%
CAD89253.1	immunoglobulin kappa light chain [Homo sapiens]	17.6	66.2	0%	18547	71%
CAD89257.1	immunoglobulin kappa light chain [Homo sapiens]	17.6	81.7	1%	18547	83%
CAD89235.1	immunoglobulin heavy chain [Homo sapiens]	17.6	98.8	1%	18547	80%
CAD88721.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	64.5	1%	18547	80%
CAD88749.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	33.5	0%	18547	62%
CAD88729.1	immunoglobulin heavy chain [Homo sapiens]	17.6	50.3	0%	18547	80%
CAB51729.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	49.4	0%	18547	80%
CAB51732.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	100	1%	18547	80%
NP_002752.1	sperm protamine P1 [Homo sapiens]	17.6	82.5	0%	18547	100%
Q9Y244.1	RecName: Full=Proteasome maturation protein; AltName: Full=Proteassemblin; AltName: Full=Protein UMP1 homolog; Short=hUMP1; AltName: Full=Voltage-gated K channel beta subunit 4.1	17.6	65.3	0%	18547	83%
NP_001616.1	adenylate kinase 2, mitochondrial isoform a [Homo sapiens] >sp\|P54819.2\|KAD2_HUMAN RecName: Full=Adenylate kinase 2, mitochondrial; Short=AK 2; AltName: Full=ATP-AMP transphosphorylase 2 >gb\|AAB41790.1\| adenylate kinase 2A [Homo sapiens]	17.6	165	2%	18547	83%
CAB51309.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.6	97.6	1%	18547	100%
NP_037543.1	adenylate kinase 2, mitochondrial isoform b [Homo sapiens] >gb\|AAC13881.1\| adenylate kinase 2B [Homo sapiens]	17.6	165	2%	18547	83%
CAC03786.1	T-cell receptor beta chain [Homo sapiens]	17.6	49.4	0%	18547	100%
CAB46473.1	immunoglobulin light chain variable region [Homo sapiens]	17.6	82.9	1%	18547	100%
CAB46455.1	immunoglobulin light chain variable region [Homo sapiens]	17.6	119	1%	18547	100%
CAB59388.1	T cell receptor beta chain variable region [Homo sapiens]	17.6	33.1	0%	18547	80%
CAB51721.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	67.5	0%	18547	83%
CAC27998.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	66.2	0%	18547	66%
CAC28005.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	66.2	0%	18547	66%
CAC28018.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	68.3	1%	18547	66%
CAC03761.1	T-cell receptor beta chain [Homo sapiens]	17.6	50.3	0%	18547	83%
CAD32735.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	34.8	0%	18547	62%
CAB59397.1	T cell receptor beta chain variable region [Homo sapiens]	17.6	33.1	0%	18547	80%
CAC03945.1	T-cell receptor beta chain [Homo sapiens]	17.6	49.8	0%	18547	80%
1DDF_A	Chain A, Fas Death Domain, Nmr, Minimized Average Structure	17.6	84.2	1%	18547	80%
CAC28009.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	66.2	0%	18547	66%
CAC28008.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.6	118	2%	18547	75%
CAC28913.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	17.6	66.2	0%	18547	80%
CAC03797.1	T-cell receptor beta chain [Homo sapiens]	17.6	33.9	0%	18547	60%
P28072.4	RecName: Full=Proteasome subunit beta type-6; AltName: Full=Proteasome delta chain; AltName: Full=Macropain delta chain; AltName: Full=Multicatalytic endopeptidase complex delta chain; AltName: Full=Proteasome subunit Y; Flags: Precursor	17.6	82.9	1%	18547	85%
CAC28909.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	17.6	51.5	0%	18547	80%
CAC03839.1	T-cell receptor beta chain [Homo sapiens]	17.6	49.4	0%	18547	100%
1C9H_A	Chain A, Crystal Structure Of Fkbp12.6 In Complex With Rapamycin	17.6	99.7	1%	18547	80%
1GHQ_A	Chain A, Cr2-C3d Complex Structure	17.6	210	2%	18547	100%
1C3D_A	Chain A, X-Ray Crystal Structure Of C3d: A C3 Fragment And Ligand For Complement Receptor 2	17.6	210	2%	18547	100%
CAC03818.1	T-cell receptor beta chain [Homo sapiens]	17.6	49.4	0%	18547	100%
CAC03958.1	T-cell receptor beta chain [Homo sapiens]	17.6	49.0	0%	18547	83%
CAC03975.1	T-cell receptor beta chain [Homo sapiens]	17.6	49.4	0%	18547	100%
CAB51718.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	79.5	0%	18547	100%
CAB59398.1	T cell receptor beta chain variable region [Homo sapiens]	17.6	64.5	0%	18547	83%
CAC94945.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.6	51.1	0%	18547	100%
CAR62588.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	65.3	0%	22034	80%
2X7A_A	Chain A, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|B Chain B, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|C Chain C, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|D Chain D, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|E Chain E, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|F Chain F, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|G Chain G, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|H Chain H, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|I Chain I, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|J Chain J, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain >pdb\|2X7A\|K Chain K, Structural Basis Of Hiv-1 Tethering To Membranes By The Bst2-Tetherin Ectodomain	17.2	49.4	1%	24886	80%
3H3P_L	Chain L, Crystal Structure Of Hiv Epitope-Scaffold 4e10 Fv Complex >pdb\|3H3P\|M Chain M, Crystal Structure Of Hiv Epitope-Scaffold 4e10 Fv Complex	17.2	81.7	1%	24886	100%
ACY78415.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.2	82.1	1%	24886	80%
ACN63243.1	B cell antibody heavy chain variable region [Homo sapiens]	17.2	67.5	0%	24886	85%
2KGG_A	Chain A, Solution Structure Of Jarid1a C-Terminal Phd Finger >pdb\|2KGI\|A Chain A, Solution Structure Of Jarid1a C-Terminal Phd Finger In Complex With H3(1-9)k4me3 >pdb\|3GL6\|A Chain A, Crystal Structure Of Jarid1a-Phd3 Complexed With H3(1-9) K4me3 Peptide	17.2	66.6	0%	24886	80%
ACJ37264.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	17.2	64.5	1%	24886	80%
CAR63027.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	98.8	1%	24886	100%
CAR63004.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	64.5	0%	24886	80%
CAR62979.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	32.7	0%	24886	100%
CAR62959.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	33.5	0%	24886	62%
CAR62932.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	48.6	0%	24886	100%
CAR62918.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	50.3	0%	24886	71%
CAR62823.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	50.3	0%	24886	71%
CAR62733.1	immunoglobulin kappa chain variable region [Homo sapiens]	17.2	48.6	1%	24886	62%
CAR62730.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	33.5	0%	24886	83%
CAR62675.1	immunoglobulin kappa chain variable region [Homo sapiens]	17.2	50.7	1%	24886	75%
CAR62625.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	64.5	0%	24886	83%
CAR62602.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	67.5	1%	24886	71%
CAR62586.1	immunoglobulin lambda chain variable region [Homo sapiens]	17.2	97.2	1%	24886	83%
CAR62555.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	81.7	0%	24886	80%
2JJV_A	Chain A, Structure Of Human Signal Regulatory Protein (Sirp) Beta(2) >pdb\|2JJV\|B Chain B, Structure Of Human Signal Regulatory Protein (Sirp) Beta(2)	17.2	82.5	1%	24886	80%
2JF1_T	Chain T, Crystal Structure Of The Filamin A Repeat 21 Complexed With The Integrin Beta2 Cytoplasmic Tail Peptide	17.2	32.7	0%	24886	80%
ABQ02433.1	immunoglobulin heavy chain VDJ region [Homo sapiens]	17.2	67.0	0%	24886	100%
ABQ02423.1	immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02424.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02425.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02426.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02427.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02428.1\| immunoglobulin heavy chain VDJ region [Homo sapiens]	17.2	82.5	0%	24886	100%
ABQ02414.1	immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02415.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02416.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02417.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02418.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02419.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02420.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02421.1\| immunoglobulin heavy chain VDJ region [Homo sapiens]	17.2	99.7	1%	24886	100%
ABQ02411.1	immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02412.1\| immunoglobulin heavy chain VDJ region [Homo sapiens] >gb\|ABQ02413.1\| immunoglobulin heavy chain VDJ region [Homo sapiens]	17.2	82.9	1%	24886	100%
ABQ02422.1	immunoglobulin heavy chain VDJ region [Homo sapiens]	17.2	99.7	1%	24886	100%
NP_001103685.1	centromere protein M isoform c [Homo sapiens]	17.2	48.6	0%	24886	100%
ABR67903.1	T cell receptor delta chain variable region [Homo sapiens]	17.2	17.2	0%	24886	80%
ABR37270.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.5	0%	24886	100%
2PM4_A	Chain A, Human Alpha-Defensin 1 (Multiple Arg->lys Mutant) >pdb\|2PM4\|B Chain B, Human Alpha-Defensin 1 (Multiple Arg->lys Mutant)	17.2	17.2	0%	24886	80%
NP_005663.2	prostate stem cell antigen preproprotein [Homo sapiens]	17.2	32.7	0%	24886	83%
ABG38382.1	immunoglobulin light chain variable region [Homo sapiens]	17.2	96.3	1%	24886	80%
AAQ93806.1	NOD2 protein [Homo sapiens]	17.2	82.1	1%	24886	83%
O00453.2	RecName: Full=Leukocyte-specific transcript 1 protein; AltName: Full=Protein B144	17.2	49.4	0%	24886	80%
1PPQ_A	Chain A, Nmr Structure Of 16th Module Of Immune Adherence Receptor, Cr1 (Cd35)	17.2	33.1	0%	24886	100%
3H0T_C	Chain C, Hepcidin-Fab Complex	17.2	17.2	0%	24886	80%
NP_002376.1	myelin basic protein isoform 2 [Homo sapiens]	17.2	128	1%	24886	83%
AAC41986.1	This CDS feature is included to show the translation of the corresponding V_region. Presently translation qualifiers on V_region features are illegal [Homo sapiens]	17.2	97.2	1%	24886	100%
NP_001020261.1	myelin basic protein isoform 3 [Homo sapiens]	17.2	98.4	1%	24886	83%
AAC61601.1	immunoglobulin variable region used by the ITC33 heavy chain (subgroup VH5) (anti-cytomeglovirus glycoprotein B (AD-1 epitope))' [Homo sapiens]	17.2	64.9	0%	24886	85%
AAZ32311.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	32.7	0%	24886	80%
AAZ32308.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	95.5	1%	24886	100%
AAY33469.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.2	49.8	0%	24886	83%
AAY33398.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.2	48.6	0%	24886	80%
AAY33475.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	17.2	65.8	0%	24886	83%
AAY33201.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.2	82.1	1%	24886	71%
AAY33268.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.2	33.1	0%	24886	80%
AAY33307.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.2	50.7	0%	24886	85%
AAY33228.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.2	33.1	0%	24886	80%
AAY33227.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.2	49.4	0%	24886	85%
AAY33226.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	17.2	17.2	0%	24886	80%
AAY16618.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	98.8	1%	24886	80%
AAY16615.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	130	2%	24886	80%
AAY16629.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	81.2	1%	24886	80%
AAY16636.1	immunoglobulin lambda light chain [Homo sapiens]	17.2	97.6	1%	24886	83%
AAY16628.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	128	1%	24886	100%
AAY16609.1	immunoglobulin kappa light chain [Homo sapiens] >gb\|AAY16627.1\| immunoglobulin kappa light chain [Homo sapiens]	17.2	48.2	0%	24886	80%
AAS59835.1	T-cell immune regulator 1 transcript variant 5 [Homo sapiens]	17.2	32.7	0%	24886	100%
AAB50741.1	T-cell receptor V3J2S7 beta chain [human, CD4- large granular lymphocytes, patient PGSC P1 isolate, Peptide Partial, 19 aa]	17.2	17.2	0%	24886	71%
AAL04529.1	anti-pneumococcal capsular polysaccharide immunoglobulin heavy chain variable region [Homo sapiens]	17.2	48.6	0%	24886	100%
AAB20520.1	T-cell receptor V beta 9, TCR Vbeta9 [human, 1020-9 synovial T cells, Peptide Partial, 18 aa]	17.2	17.2	0%	24886	75%
AAL04533.1	anti-pneumococcal capsular polysaccharide immunoglobulin variable region [Homo sapiens]	17.2	112	1%	24886	80%
AAB50760.1	T-cell receptor V6J2S3 beta chain [human, CD4+CD57- large granular lymphocytes, patient IOPU I1 isolate, Peptide Partial, 20 aa]	17.2	17.2	0%	24886	80%
NP_857591.1	chemokine-like factor isoform b [Homo sapiens]	17.2	129	1%	24886	100%
CAJ00289.1	T-cell receptor alpha chain [Homo sapiens]	17.2	17.2	0%	24886	83%
1SNX_A	Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase Catalytic Domain >pdb\|1SNX\|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase Catalytic Domain	17.2	131	1%	24886	83%
CAG29701.1	immunoglobulin kappa light chain [Homo sapiens]	17.2	48.6	1%	24886	62%
CAG29709.1	immunoglobulin heavy chain [Homo sapiens]	17.2	33.5	0%	24886	83%
CAD88752.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.2	50.3	0%	24886	71%
CAD88646.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.2	50.3	0%	24886	71%
CAD88687.1	immunoglobulin kappa light chain variable region [Homo sapiens]	17.2	33.9	0%	24886	80%
CAD88727.1	immunoglobulin heavy chain [Homo sapiens]	17.2	33.9	0%	24886	85%
CAD88713.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.2	50.3	0%	24886	71%
CAD88751.1	immunoglobulin lambda light chain variable region [Homo sapiens]	17.2	81.7	1%	24886	83%
CAD88760.1	immunoglobulin heavy chain [Homo sapiens]	17.2	17.2	0%	24886	60%
CAD88744.1	immunoglobulin kappa light chain variable region [Homo sapiens]	17.2	81.7	1%	24886	80%
CAD88759.1	immunoglobulin heavy chain [Homo sapiens]	17.2	48.6	0%	24886	72%
CAD88732.1	immunoglobulin heavy chain [Homo sapiens]	17.2	33.5	0%	24886	83%
CAD88668.1	immunoglobulin heavy chain [Homo sapiens]	17.2	17.2	0%	24886	100%
CAB59410.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	17.2	0%	24886	83%
1DFN_A	Chain A, Crystal Structure Of Defensin Hnp-3, An Amphiphilic Dimer: Mechanisms Of Membrane Permeabilization >pdb\|1DFN\|B Chain B, Crystal Structure Of Defensin Hnp-3, An Amphiphilic Dimer: Mechanisms Of Membrane Permeabilization	17.2	49.8	0%	24886	80%
CAC03835.1	T-cell receptor beta chain [Homo sapiens]	17.2	49.8	0%	24886	83%
2KJU_A	Chain A, Nmr Structure Of Human Insulin Mutant Glu-B21-D-Glu, His-B10 B28-Lys, Lys-B29-Pro, 20 Structures	17.2	49.4	0%	24886	100%
P30273.1	RecName: Full=High affinity immunoglobulin epsilon receptor subunit gamma; AltName: Full=IgE Fc receptor subunit gamma; Short=FceRI gamma; AltName: Full=Fc-epsilon RI-gamma; Flags: Precursor	17.2	33.9	0%	24886	83%
CAC03760.1	T-cell receptor beta chain [Homo sapiens]	17.2	32.7	0%	24886	80%
CAC03937.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	100%
NP_001020263.1	myelin basic protein isoform 4 [Homo sapiens]	17.2	81.7	1%	24886	80%
NP_076958.1	centromere protein M isoform a [Homo sapiens]	17.2	97.6	1%	24886	100%
CAC03863.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAC28896.1	immunoglobulin gamma heavy chain variable region [Homo sapiens]	17.2	48.6	1%	24886	62%
NP_444512.2	SH2 domain-containing protein 1B [Homo sapiens] >sp\|O14796.2\|SH21B_HUMAN RecName: Full=SH2 domain-containing protein 1B; AltName: Full=EWS/FLI1-activated transcript 2; Short=EAT-2	17.2	17.2	0%	24886	41%
CAB59374.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	49.0	0%	24886	80%
CAB59414.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	17.2	0%	24886	83%
CAB59376.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	48.6	0%	24886	66%
CAB59422.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	33.9	0%	24886	83%
CAC48309.1	T-cell receptor beta chain [Homo sapiens]	17.2	49.0	0%	24886	80%
CAC03812.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
CAC03900.1	T-cell receptor beta chain [Homo sapiens]	17.2	49.8	1%	24886	75%
CAB46468.1	immunoglobulin light chain variable region [Homo sapiens]	17.2	99.3	1%	24886	83%
CAC03837.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAC03950.1	T-cell receptor beta chain [Homo sapiens]	17.2	34.4	0%	24886	83%
CAC03790.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
CAC48306.1	T-cell receptor beta chain [Homo sapiens]	17.2	65.8	0%	24886	100%
CAC03845.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
NP_001502.1	growth-regulated alpha protein precursor [Homo sapiens]	17.2	65.3	0%	24886	100%
NP_001020252.1	myelin basic protein isoform 1 [Homo sapiens]	17.2	144	1%	24886	83%
CAC03923.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
CAC03794.1	T-cell receptor beta chain [Homo sapiens]	17.2	32.7	0%	24886	83%
CAC03769.1	T-cell receptor beta chain [Homo sapiens]	17.2	32.7	0%	24886	80%
CAC03850.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAC94943.1	immunoglobulin heavy chain variable region [Homo sapiens]	17.2	49.0	0%	24886	83%
CAC03911.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
1FYW_A	Chain A, Crystal Structure Of The Tir Domain Of Human Tlr2	17.2	82.5	1%	24886	75%
CAC03931.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAC03849.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAC03841.1	T-cell receptor beta chain [Homo sapiens]	17.2	49.0	0%	24886	80%
CAC03924.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	71%
CAB59420.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	33.1	0%	24886	83%
CAC03913.1	T-cell receptor beta chain [Homo sapiens]	17.2	49.0	0%	24886	83%
CAC03789.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
CAC03799.1	T-cell receptor beta chain [Homo sapiens]	17.2	49.8	0%	24886	83%
CAC03919.1	T-cell receptor beta chain [Homo sapiens]	17.2	64.9	1%	24886	83%
1LVE_A	Chain A, Structure Of The Variable Domain Of Human Immunoglobulin K- 4 Light Chain Len	17.2	48.2	0%	24886	80%
AAA58696.2	Ig mu-chain Vv-region precursor [Homo sapiens]	17.2	50.7	0%	24886	85%
2KHT_A	Chain A, Nmr Structure Of Human Alpha Defensin Hnp-1	17.2	49.8	0%	24886	80%
CAC03810.1	T-cell receptor beta chain [Homo sapiens]	17.2	50.3	0%	24886	83%
CAC03819.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAB59395.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	33.1	0%	24886	75%
CAC03978.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
CAB59404.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	49.0	0%	24886	80%
NP_066998.1	hepcidin preproprotein [Homo sapiens]	17.2	98.8	1%	24886	100%
3B71_A	Chain A, Cd4 Endocytosis Motif Bound To The Focal Adhesion Targeting (Fat) Domain Of The Focal Adhesion Kinase >pdb\|3B71\|B Chain B, Cd4 Endocytosis Motif Bound To The Focal Adhesion Targeting (Fat) Domain Of The Focal Adhesion Kinase >pdb\|3B71\|C Chain C, Cd4 Endocytosis Motif Bound To The Focal Adhesion Targeting (Fat) Domain Of The Focal Adhesion Kinase	17.2	113	1%	24886	83%
CAC03854.1	T-cell receptor beta chain [Homo sapiens]	17.2	33.1	0%	24886	83%
CAB59425.1	T cell receptor beta chain variable region [Homo sapiens]	17.2	33.1	0%	24886	83%
CAC03771.1	T-cell receptor beta chain [Homo sapiens]	17.2	17.2	0%	24886	83%
3LU9_C	Chain C, Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1 >pdb\|3LU9\|F Chain F, Crystal Structure Of Human Thrombin Mutant S195a In Complex Extracellular Fragment Of Human Par1	16.8	16.8	0%	33392	71%
ACN63317.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	81.7	1%	33392	85%
ACN63315.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	97.2	1%	33392	85%
ACN63308.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	64.9	0%	33392	80%
ACN63304.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63306.1\| B cell antibody heavy chain variable region [Homo sapiens]	16.8	97.2	1%	33392	85%
ACN63302.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	81.7	1%	33392	85%
ACN63299.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	64.9	0%	33392	80%
ACN63297.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	64.9	0%	33392	85%
ACN63296.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63301.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63305.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63307.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63309.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63312.1\| B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63318.1\| B cell antibody heavy chain variable region [Homo sapiens]	16.8	49.0	0%	33392	80%
ACN63285.1	B cell antibody heavy chain variable region [Homo sapiens] >gb\|ACN63288.1\| B cell antibody heavy chain variable region [Homo sapiens]	16.8	64.5	1%	33392	66%
ACN63279.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	80.4	1%	33392	66%
ACN63278.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	64.5	1%	33392	66%
ACN63269.1	B cell antibody heavy chain variable region [Homo sapiens]	16.8	64.5	1%	33392	66%
ACL37483.1	immunoglobulin heavy chain gamma CDR3 VH3 [Homo sapiens] >gb\|ACL37484.1\| immunoglobulin heavy chain gamma CDR3 VH3 [Homo sapiens]	16.8	16.8	0%	33392	60%
CAR63058.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	16.8	0%	33392	60%
CAR63056.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	48.6	0%	33392	80%
CAR63055.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	32.7	0%	33392	83%
CAR63025.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	48.6	0%	33392	80%
CAR63002.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	33.1	0%	33392	60%
CAR62998.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	48.6	0%	33392	80%
CAR62966.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	48.6	0%	33392	71%
CAR62931.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	32.2	0%	33392	85%
CAR62921.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	33.1	0%	33392	80%
CAR62916.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	47.7	0%	33392	83%
CAR62913.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	32.7	0%	33392	71%
CAR62847.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	32.7	0%	33392	55%
CAR62826.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	16.8	0%	33392	60%
CAR62824.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	16.8	0%	33392	60%
CAR62822.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	16.8	0%	33392	60%
CAR62816.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	48.2	0%	33392	71%
CAR62757.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	49.4	0%	33392	80%
CAR62743.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	32.7	0%	33392	80%
CAR62742.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	32.7	0%	33392	80%
CAR62702.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	32.2	0%	33392	71%
CAR62691.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	63.6	0%	33392	80%
CAR62688.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	49.8	0%	33392	70%
CAR62669.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	64.5	1%	33392	80%
CAR62664.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	16.8	0%	33392	66%
CAR62649.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	64.5	0%	33392	80%
CAR62599.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.8	97.2	1%	33392	83%
CAR62567.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	49.0	0%	33392	100%
CAR62563.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	48.2	1%	33392	71%
2NQC_A	Chain A, Crystal Structure Of Ig-Like Domain 23 From Human Filamin C	16.8	48.6	0%	33392	80%
2Q87_A	Chain A, The Crystal Structure Of The Human Irp60 Ectodomain >pdb\|2Q87\|B Chain B, The Crystal Structure Of The Human Irp60 Ectodomain >pdb\|2Q87\|C Chain C, The Crystal Structure Of The Human Irp60 Ectodomain	16.8	33.1	0%	33392	100%
ABR67897.1	T cell receptor delta chain variable region [Homo sapiens]	16.8	32.2	0%	33392	71%
ABR67887.1	T cell receptor delta chain variable region [Homo sapiens]	16.8	16.8	0%	33392	80%
ABG38442.1	immunglobulin heavy chain variable region [Homo sapiens]	16.8	33.1	0%	33392	66%
ABG38363.1	immunoglobulin light chain variable region [Homo sapiens]	16.8	63.6	0%	33392	80%
AAC61604.1	immunoglobulin variable region used by the ITC39 lambda light chain (subgroup V lambda III) (anti-cytomeglovirus glycoprotein B [Homo sapiens]	16.8	47.7	0%	33392	62%
AAA52858.1	Ig mu-chain Vv-region precursor [Homo sapiens]	16.8	32.2	0%	33392	85%
AAY57150.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	95.0	1%	33392	100%
AAY33269.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	16.8	49.4	0%	33392	71%
AAY33353.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	16.8	49.4	0%	33392	66%
AAB50742.1	T-cell receptor V11J2S2 beta chain [human, CD4- large granular lymphocytes, patient SAIN S1 isolate, Peptide Partial, 16 aa]	16.8	16.8	0%	33392	83%
AAB20490.1	T-cell V beta 17, TCR Vbeta17 [human, 1012-1 synovial T cells, Peptide Partial, 15 aa]	16.8	16.8	0%	33392	83%
AAC51769.1	lymphotoxin beta isoform variant [Homo sapiens]	16.8	95.9	1%	33392	80%
AAB20506.1	T-cell receptor V beta 3, TCR Vbeta3 [human, 1015-4 synovial T cells, Peptide Partial, 20 aa]	16.8	16.8	0%	33392	62%
1T0P_A	Chain A, Structural Basis Of Icam Recognition By Integrin Alpahlbeta2 Revealed In The Complex Structure Of Binding Domains Of Icam-3 And Alphalbeta2 At 1.65 A	16.8	65.8	1%	33392	80%
CAG29698.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	16.8	0%	33392	57%
CAG29697.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	32.7	0%	33392	80%
CAG29704.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	32.2	0%	33392	57%
CAD89256.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	16.8	0%	33392	57%
CAD89252.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	16.8	0%	33392	57%
CAD89255.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	33.5	0%	33392	83%
CAD89260.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	50.3	0%	33392	80%
CAD89258.1	immunoglobulin kappa light chain [Homo sapiens]	16.8	64.9	1%	33392	66%
CAD88690.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	48.2	0%	33392	80%
CAD88650.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	49.4	0%	33392	80%
CAD88699.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	16.8	0%	33392	66%
CAD88745.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	32.2	0%	33392	57%
CAD88740.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	48.2	0%	33392	80%
CAD88698.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	67.0	1%	33392	75%
CAD88718.1	immunoglobulin lambda light chain variable region [Homo sapiens]	16.8	64.5	0%	33392	100%
CAD88746.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	48.2	0%	33392	80%
CAD88692.1	immunoglobulin kappa light chain variable region [Homo sapiens]	16.8	63.6	0%	33392	100%
CAD88717.1	immunoglobulin lambda light chain variable region [Homo sapiens]	16.8	16.8	0%	33392	60%
CAB59379.1	T cell receptor beta chain variable region [Homo sapiens]	16.8	64.5	0%	33392	80%
CAC03782.1	T-cell receptor beta chain [Homo sapiens]	16.8	48.6	0%	33392	83%
B41287	Ig heavy chain precursor V-IV region (98-6) (anti-HIV-1) - human >gb\|AAA52942.1\| anti-HIV1 antibody [Homo sapiens]	16.8	64.1	0%	33392	71%
CAC03912.1	T-cell receptor beta chain [Homo sapiens]	16.8	16.8	0%	33392	83%
CAB46464.1	immunoglobulin light chain variable region [Homo sapiens]	16.8	32.7	0%	33392	57%
CAB51303.1	immunoglobulin kappa chain variable region [Homo sapiens]	16.8	82.5	1%	33392	100%
CAC03898.1	T-cell receptor beta chain [Homo sapiens]	16.8	32.7	0%	33392	83%
CAC03922.1	T-cell receptor beta chain [Homo sapiens]	16.8	33.1	0%	33392	80%
CAB51734.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.8	32.7	0%	33392	85%
CAC03964.1	T-cell receptor beta chain [Homo sapiens]	16.8	64.5	0%	33392	80%
CAB59407.1	T cell receptor beta chain variable region [Homo sapiens]	16.8	48.6	0%	33392	71%
NP_064570.1	dual specificity protein phosphatase 22 [Homo sapiens]	16.8	81.2	1%	33392	80%
CAC03909.1	T-cell receptor beta chain [Homo sapiens]	16.8	49.4	0%	33392	83%
CAC03876.1	T-cell receptor beta chain [Homo sapiens]	16.8	16.8	0%	33392	80%
CAC03860.1	T-cell receptor beta chain [Homo sapiens]	16.8	32.7	0%	33392	83%
CAC03940.1	T-cell receptor beta chain [Homo sapiens]	16.8	32.2	0%	33392	100%
CAB59417.1	T cell receptor beta chain variable region [Homo sapiens]	16.8	32.2	0%	33392	80%
3HR5_R	Chain R, M1prime Peptide From Ige Bound By Humanized Antibody 47h4 Fa >pdb\|3HR5\|S Chain S, M1prime Peptide From Ige Bound By Humanized Antibody 47h4 Fa >pdb\|3HR5\|T Chain T, M1prime Peptide From Ige Bound By Humanized Antibody 47h4 Fa >pdb\|3HR5\|V Chain V, M1prime Peptide From Ige Bound By Humanized Antibody 47h4 Fa	16.3	16.3	0%	44805	71%
3L6F_C	Chain C, Structure Of Mhc Class Ii Molecule Hla-Dr1 Complexed With Phosphopeptide Mart-1	16.3	16.3	0%	44805	62%
ACJ37285.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	16.3	79.1	0%	44805	80%
P0C7T4.1	RecName: Full=Minor histocompatibility protein HMSD variant form; Short=HSMD-v; Contains: RecName: Full=Minor histocompatibility antigen ACC-6; Short=mHA ACC-6	16.3	47.7	0%	44805	66%
CAR63011.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	63.6	0%	44805	100%
CAR62903.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	16.3	0%	44805	66%
CAR62868.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.3	32.2	0%	44805	100%
CAR62819.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	16.3	0%	44805	80%
CAR62717.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	63.6	0%	44805	80%
CAR62706.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	47.3	0%	44805	100%
CAR62705.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	47.3	0%	44805	100%
CAR62658.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	16.3	0%	44805	100%
CAR62653.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	16.3	0%	44805	100%
CAR62647.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	48.2	0%	44805	100%
CAR62611.1	immunoglobulin lambda chain variable region [Homo sapiens]	16.3	16.3	0%	44805	100%
CAR62548.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.3	63.2	1%	44805	66%
3BES_L	Chain L, Structure Of A Poxvirus IfngbpIFNG COMPLEX	16.3	112	1%	44805	80%
2D9K_A	Chain A, Solution Structure Of The Zf-Traf Domain Of Fln29 Gene Product	16.3	32.2	0%	44805	80%
ABR67900.1	T cell receptor delta chain variable region [Homo sapiens]	16.3	16.3	0%	44805	71%
ABR67894.1	T cell receptor delta chain variable region [Homo sapiens]	16.3	16.3	0%	44805	71%
ABG38431.1	immunglobulin heavy chain variable region [Homo sapiens] >gb\|ABG38432.1\| immunglobulin heavy chain variable region [Homo sapiens]	16.3	47.3	0%	44805	100%
ABG38395.1	immunoglobulin light chain variable region [Homo sapiens]	16.3	79.1	1%	44805	80%
AAS54904.1	von Willebrand factor-cleaving protease [Homo sapiens]	16.3	32.7	0%	44805	71%
AAM28522.1	EWS/FLI1 activated transcript 2-like protein [Homo sapiens]	16.3	16.3	0%	44805	44%
2CRN_A	Chain A, Solution Structure Of The Uba Domain Of Human Ubash3a Protein	16.3	16.3	0%	44805	62%
AAL65227.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.3	16.3	0%	44805	80%
AAY57171.1	immunoglobulin heavy chain variable region [Homo sapiens]	16.3	16.3	0%	44805	80%
AAY33287.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	16.3	62.8	0%	44805	100%
NP_001002876.1	centromere protein M isoform b [Homo sapiens]	16.3	32.7	0%	44805	100%
AAB50756.1	T-cell receptor V6J1S2 beta chain [human, CD4+CD57+ large granular lymphocytes, patient IOPU I1 isolate, Peptide Partial, 18 aa]	16.3	16.3	0%	44805	71%
CAJ00286.1	T-cell receptor beta chain [Homo sapiens]	16.3	16.3	0%	44805	66%
1YMM_C	Chain C, TcrHLA-Dr2bMBP-Peptide Complex	16.3	16.3	0%	44805	80%
1NL0_G	Chain G, Crystal Structure Of Human Factor Ix Gla Domain In Complex Of An Inhibitory Antibody, 10c12	16.3	16.3	0%	44805	66%
CAD88753.1	immunoglobulin lambda light chain variable region [Homo sapiens]	16.3	31.8	0%	44805	83%
CAD88684.1	immunoglobulin heavy chain [Homo sapiens] >emb\|CAD88685.1\| immunoglobulin heavy chain [Homo sapiens]	16.3	63.6	0%	44805	80%
CAD88766.1	immunoglobulin heavy chain [Homo sapiens]	16.3	32.2	0%	44805	80%
CAC03977.1	T-cell receptor beta chain [Homo sapiens]	16.3	16.3	0%	44805	66%
NP_000610.2	interferon gamma precursor [Homo sapiens] >sp\|P01579.1\|IFNG_HUMAN RecName: Full=Interferon gamma; Short=IFN-gamma; AltName: Full=Immune interferon; Flags: Precursor >emb\|CAA23804.1\| unnamed protein product [Homo sapiens] >gb\|AAB59534.1\| interferon-gamma [Homo sapiens] >prf\|\|0809316A interferon gamma	16.3	128	1%	44805	80%
3KR3_D	Chain D, Crystal Structure Of Igf-Ii Antibody Complex	16.3	47.7	0%	44805	66%
1EKU_A	Chain A, Crystal Structure Of A Biologically Active Single Chain Mutant Of Human Ifn-Gamma >pdb\|1EKU\|B Chain B, Crystal Structure Of A Biologically Active Single Chain Mutant Of Human Ifn-Gamma	16.3	192	1%	44805	80%
1FG9_A	Chain A, 3:1 Complex Of Interferon-Gamma Receptor With Interferon- Gamma Dimer >pdb\|1FG9\|B Chain B, 3:1 Complex Of Interferon-Gamma Receptor With Interferon- Gamma Dimer	16.3	80.4	1%	44805	80%
1FYH_A	Chain A, 1:1 Complex Between An Interferon Gamma Single-Chain Variant And Its Receptor >pdb\|1FYH\|D Chain D, 1:1 Complex Between An Interferon Gamma Single-Chain Variant And Its Receptor	16.3	160	1%	44805	80%
CAC03858.1	T-cell receptor beta chain [Homo sapiens]	16.3	63.2	0%	44805	80%
CAC03767.1	T-cell receptor beta chain [Homo sapiens]	16.3	62.8	0%	44805	66%
CAC03784.1	T-cell receptor beta chain [Homo sapiens]	16.3	16.3	0%	44805	62%
CAC03962.1	T-cell receptor beta chain [Homo sapiens]	16.3	47.7	0%	44805	66%
1G1S_C	Chain C, P-Selectin LectinEGF DOMAINS COMPLEXED WITH PSGL-1 Peptide >pdb\|1G1S\|D Chain D, P-Selectin LectinEGF DOMAINS COMPLEXED WITH PSGL-1 Peptide	16.3	16.3	0%	44805	80%
CAB59415.1	T cell receptor beta chain variable region [Homo sapiens]	16.3	47.7	0%	44805	80%
CAC03887.1	T-cell receptor beta chain [Homo sapiens]	16.3	47.7	0%	44805	66%
CAC03953.1	T-cell receptor beta chain [Homo sapiens]	16.3	16.3	0%	44805	66%
CAC03762.1	T-cell receptor beta chain [Homo sapiens]	16.3	16.3	0%	44805	66%
CAA31639.1	unnamed protein product [Homo sapiens] >prf\|\|0803242A interferon gamma,immune	16.3	112	1%	44805	80%
CAC03773.1	T-cell receptor beta chain [Homo sapiens]	16.3	31.8	0%	44805	55%
CAC03843.1	T-cell receptor beta chain [Homo sapiens]	16.3	64.5	0%	44805	100%
ACN63274.1	B cell antibody heavy chain variable region [Homo sapiens]	15.9	46.9	0%	60118	100%
ACJ37262.1	anti-HIV-1 V3 immunoglobulin heavy chain [Homo sapiens]	15.9	31.4	0%	60118	80%
CAR63057.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	31.8	0%	60118	80%
CAR62995.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	47.7	0%	60118	80%
CAR62994.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	31.4	0%	60118	80%
CAR62914.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	31.4	0%	60118	71%
CAR62911.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	31.4	0%	60118	71%
CAR62893.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.9	31.4	0%	60118	62%
CAR62842.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.9	62.8	0%	60118	80%
CAR62840.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	31.8	0%	60118	80%
CAR62832.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	15.9	0%	60118	66%
CAR62738.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.9	15.9	0%	60118	66%
CAR62712.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	31.8	0%	60118	80%
CAR62682.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.9	15.9	0%	60118	71%
CAR62679.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.9	31.4	0%	60118	80%
CAR62674.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.9	46.9	0%	60118	100%
CAR62645.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.9	63.6	0%	60118	83%
ABR91955.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
ABR67892.1	T cell receptor delta chain variable region [Homo sapiens]	15.9	15.9	0%	60118	100%
2NLS_A	Chain A, Human Beta-Defensin-1 (Mutant Gln24ala)	15.9	15.9	0%	60118	100%
ABG38394.1	immunoglobulin light chain variable region [Homo sapiens]	15.9	46.9	0%	60118	80%
CAJ14073.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	71%
CAJ14075.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	71%
CAJ14064.1	T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14082.1\| T-cell receptor beta chain [Homo sapiens] >emb\|CAJ14087.1\| T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAJ14085.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
AAD47065.1	anti-HLA-A2/A28 immunoglobulin heavy chain variable region [Homo sapiens]	15.9	47.3	1%	60118	100%
AAL04521.1	anti-pneumococcal capsular polysaccharide immunoglobulin light chain variable region [Homo sapiens]	15.9	46.9	0%	60118	80%
AAD47069.1	anti-HLA-A2/A28 immunoglobulin heavy chain variable region [Homo sapiens]	15.9	63.2	1%	60118	100%
AAY33446.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	15.9	31.8	0%	60118	80%
AAY33238.1	anti-rabies virus immunoglobulin heavy chain variable region [Homo sapiens]	15.9	15.9	0%	60118	66%
AAB50754.1	T-cell receptor V2J2S7 beta chain [human, CD4+CD57- large granular lymphocytes, patient IOPU I1 isolate, Peptide Partial, 20 aa]	15.9	15.9	0%	60118	80%
AAB29244.1	T cell receptor beta chain variable region {CDR3 region} [human, PBMC cells, patient I, Peptide Partial, 17 aa]	15.9	15.9	0%	60118	71%
CAJ00280.1	T-cell receptor alpha chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAG29720.1	immunoglobulin kappa light chain [Homo sapiens]	15.9	31.4	0%	60118	80%
CAD89263.1	immunoglobulin kappa light chain [Homo sapiens]	15.9	31.4	0%	60118	100%
CAD88755.1	immunoglobulin lambda light chain variable region [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03947.1	T-cell receptor beta chain [Homo sapiens]	15.9	46.9	0%	60118	71%
CAC03927.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	66%
CAC03823.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	66%
2J8U_C	Chain C, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation >pdb\|2J8U\|J Chain J, Large Cdr3a Loop Alteration As A Function Of Mhc Mutation. >pdb\|2JCC\|C Chain C, Ah3 Recognition Of Mutant Hla-A2 W167a >pdb\|2JCC\|J Chain J, Ah3 Recognition Of Mutant Hla-A2 W167a	15.9	15.9	0%	60118	60%
CAC03982.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	66%
CAB59399.1	T cell receptor beta chain variable region [Homo sapiens]	15.9	31.4	0%	60118	66%
CAC03831.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAC03867.1	T-cell receptor beta chain [Homo sapiens]	15.9	47.7	0%	60118	80%
CAC03778.1	T-cell receptor beta chain [Homo sapiens]	15.9	47.3	0%	60118	66%
CAC03796.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03872.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAC03793.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	66%
CAC03941.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03775.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03895.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAC03840.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC48320.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAC48311.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAC03770.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03816.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAB59413.1	T cell receptor beta chain variable region [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03768.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	66%
CAC03930.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	80%
1IFR_A	Chain A, Structure Of Lamin AC GLOBULAR DOMAIN	15.9	31.8	0%	60118	57%
CAC03885.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.8	0%	60118	80%
CAC03966.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	62%
CAB46459.1	immunoglobulin light chain variable region [Homo sapiens]	15.9	15.9	0%	60118	54%
NP_061131.1	beta-defensin 103 precursor [Homo sapiens]	15.9	31.8	0%	60118	100%
CAC03853.1	T-cell receptor beta chain [Homo sapiens]	15.9	15.9	0%	60118	80%
CAC03807.1	T-cell receptor beta chain [Homo sapiens]	15.9	46.9	0%	60118	66%
CAC03880.1	T-cell receptor beta chain [Homo sapiens]	15.9	31.4	0%	60118	66%
2KJU_B	Chain B, Nmr Structure Of Human Insulin Mutant Glu-B21-D-Glu, His-B10 B28-Lys, Lys-B29-Pro, 20 Structures	15.5	15.5	0%	80666	80%
CAR62544.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.5	15.5	0%	80666	66%
CAR63034.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	46.5	0%	80666	100%
CAR62974.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	31.0	0%	80666	80%
CAR62849.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	31.0	0%	80666	100%
CAR62820.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.5	15.5	0%	80666	60%
CAR62770.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	15.5	0%	80666	100%
CAR62760.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	46.5	0%	80666	100%
CAR62719.1	immunoglobulin lambda chain variable region [Homo sapiens]	15.5	15.5	0%	80666	66%
CAR62700.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.5	15.5	0%	80666	80%
CAR62687.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.5	15.5	0%	80666	66%
CAR62676.1	immunoglobulin kappa chain variable region [Homo sapiens]	15.5	31.0	0%	80666	66%
ABR67904.1	T cell receptor delta chain variable region [Homo sapiens]	15.5	15.5	0%	80666	80%
CAL48386.1	kell blood group antigen [Homo sapiens]	15.5	15.5	0%	80666	57%
ABG38435.1	immunglobulin heavy chain variable region [Homo sapiens]	15.5	31.0	0%	80666	100%
ABG38338.1	immunoglobulin light chain variable region [Homo sapiens]	15.5	31.0	0%	80666	66%
ABG38343.1	immunoglobulin light chain variable region [Homo sapiens]	15.5	31.0	0%	80666	66%
1ZMM_A	Chain A, Crystal Structure Of Human Alpha-Defensin-4 >pdb\|1ZMM\|B Chain B, Crystal Structure Of Human Alpha-Defensin-4 >pdb\|1ZMM\|C Chain C, Crystal Structure Of Human Alpha-Defensin-4 >pdb\|1ZMM\|D Chain D, Crystal Structure Of Human Alpha-Defensin-4	15.5	15.5	0%	80666	80%
AAL51155.1	Fc alpha/mu receptor [Homo sapiens]	15.5	31.0	0%	80666	71%
AAA85190.1	rearranged heavy chain variable region [Homo sapiens] >gb\|AAA85191.1\| rearranged heavy chain variable region [Homo sapiens]	15.5	15.5	0%	80666	66%
AAY33442.1	anti-rabies virus immunoglobulin light chain variable region [Homo sapiens]	15.5	31.0	0%	80666	80%
CAG29702.1	immunoglobulin kappa light chain [Homo sapiens]	15.5	15.5	0%	80666	66%
CAD89254.1	immunoglobulin kappa light chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAD88767.1	immunoglobulin kappa light chain variable region [Homo sapiens]	15.5	15.5	0%	80666	57%
CAD88742.1	immunoglobulin kappa light chain variable region [Homo sapiens]	15.5	15.5	0%	80666	80%
CAD88702.1	immunoglobulin kappa light chain variable region [Homo sapiens]	15.5	15.5	0%	80666	66%
CAD88703.1	immunoglobulin kappa light chain variable region [Homo sapiens]	15.5	31.0	0%	80666	66%
CAD88743.1	immunoglobulin kappa light chain variable region [Homo sapiens]	15.5	15.5	0%	80666	66%
CAD88747.1	immunoglobulin kappa light chain variable region [Homo sapiens]	15.5	31.0	0%	80666	66%
5LVE_A	Chain A, Structure Of The Variable Domain Of Human Immunoglobulin K- 4 Light Chain Len	15.5	31.0	0%	80666	80%
CAB51725.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	46.5	0%	80666	66%
CAC03795.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
1EEQ_A	Chain A, M4lY(27D)DT94H MUTANT OF LEN >pdb\|1EEQ\|B Chain B, M4lY(27D)DT94H MUTANT OF LEN	15.5	31.0	0%	80666	80%
CAB59416.1	T cell receptor beta chain variable region [Homo sapiens]	15.5	15.5	0%	80666	55%
CAC03905.1	T-cell receptor beta chain [Homo sapiens]	15.5	31.0	0%	80666	80%
1MUJ_C	Chain C, Crystal Structure Of Murine Class Ii Mhc I-Ab In Complex With A Human Clip Peptide	15.5	15.5	0%	80666	62%
CAC03896.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAC03826.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAB59405.1	T cell receptor beta chain variable region [Homo sapiens]	15.5	15.5	0%	80666	80%
CAC03985.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAC03855.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAD32737.1	immunoglobulin heavy chain variable region [Homo sapiens]	15.5	46.5	0%	80666	80%
1QAC_A	Chain A, Change In Dimerization Mode By Removal Of A Single Unsatisfied Polar Residue >pdb\|1QAC\|B Chain B, Change In Dimerization Mode By Removal Of A Single Unsatisfied Polar Residue	15.5	31.0	0%	80666	80%
CAC03948.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAC03949.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
1EFQ_A	Chain A, Q38d Mutant Of Len	15.5	31.0	0%	80666	80%
1A81_B	Chain B, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|D Chain D, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|F Chain F, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|H Chain H, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|J Chain J, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam >pdb\|1A81\|L Chain L, Crystal Structure Of The Tandem Sh2 Domain Of The Syk Kinase Bound To A Dually Tyrosine-Phosphorylated Itam	15.5	15.5	0%	80666	80%
CAC03871.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
1EEU_A	Chain A, M4lY(27D)DQ89DT94H MUTANT OF LEN >pdb\|1EEU\|B Chain B, M4lY(27D)DQ89DT94H MUTANT OF LEN	15.5	31.0	0%	80666	80%
3IFN_P	Chain P, X-Ray Structure Of Amyloid Beta Peptide:antibody (Abeta1- 40:12a11) Complex	15.5	15.5	0%	80666	71%
CAB59370.1	T cell receptor beta chain variable region [Homo sapiens]	15.5	15.5	0%	80666	83%
CAC03878.1	T-cell receptor beta chain [Homo sapiens]	15.5	15.5	0%	80666	80%
CAC03817.1	T-cell receptor beta chain [Homo sapiens]	15.5	31.0	0%	80666	80%
Alignments

Select All Get selected sequences

>pdb|3JWO|A  Chain A, Structure Of Hiv-1 Gp120 With Gp41-Interactive Region: 
Layered Architecture And Basis Of Conformational Mobility
Length=357


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score =  820 bits (1928),  Expect = 0.0
 Identities = 264/306 (86%), Positives = 264/306 (86%), Gaps = 36/306 (11%)
 Frame = +2

Query  6344  KLTSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGI  6523
             KLT    SVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGI
Sbjct  88    KLTG--GSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGI  145

Query  6524  RPVVSTQLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCTRPNNNTRKRIRIQR  6703
             RPVVS QLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCT              
Sbjct  146   RPVVSSQLLLNGSLAEEEVVIRSVNFTDNAKTIIVQLNTSVEINCT--------------  191

Query  6704  GPGRAFVTIGKIGNMRQAHCNISRAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEI  6883
             G G               HCNI RAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEI
Sbjct  192   GAG---------------HCNIARAKWNNTLKQIASKLREQFGNNKTIIFKQSSGGDPEI  236

Query  6884  VTHSFNCGGEFFYCNSTQLFNSTWFNSTWSTEGSNNTEGSDTITLPCRIKQIINMWQKVG  7063
             VTH FNCGGEFFYCNSTQLFNSTWFNSTWST     TEGSDTITLPCRIKQIINMWQKVG
Sbjct  237   VTHWFNCGGEFFYCNSTQLFNSTWFNSTWST-----TEGSDTITLPCRIKQIINMWQKVG  291

Query  7064  KAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKI  7243
             KAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKI
Sbjct  292   KAMYAPPISGQIRCSSNITGLLLTRDGGNSNNESEIFRPGGGDMRDNWRSELYKYKVVKI  351

Query  7244  EPLGVA  7261
             EPLGVA
Sbjct  352   EPLGVA  357


 Score =  307 bits (718),  Expect = 9e-84
 Identities = 90/90 (100%), Positives = 90/90 (100%), Gaps = 0/90 (0%)
 Frame = +2

Query  5870  LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLVNVTENF  6049
             LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLVNVTENF
Sbjct  1     LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLVNVTENF  60

Query  6050  NMWKNDMVEQMHEDIISLWDQSLKPCVKLT  6139
             NMWKNDMVEQMHEDIISLWDQSLKPCVKLT
Sbjct  61    NMWKNDMVEQMHEDIISLWDQSLKPCVKLT  90


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7727  AGFAIL  7710
             AGFAIL
Sbjct  115   AGFAIL  120


 Score = 20.2 bits (40),  Expect(2) =  1988
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7558  PNPQE  7544
             PNPQE
Sbjct  46    PNPQE  50


 Score = 17.2 bits (33),  Expect(2) =  1988
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7441  PQQIVL  7424
             PQ++VL
Sbjct  48    PQEVVL  53


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6006  GSVGTQAC  5983
             GSV TQAC
Sbjct  92    GSVITQAC  99


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  3732  SFPPIPL--CA  3706
             SF PIP   CA
Sbjct  103   SFEPIPIHYCA  113


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8012  LVNGSLA  8032
             L NGSLA
Sbjct  154   LLNGSLA  160


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3760  NQESTIFR  3783
             N ES IFR
Sbjct  322   NNESEIFR  329


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1930  WFPSSWQT  1907
             WF S W T
Sbjct  260   WFNSTWST  267


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 10/28 (35%)
 Frame = +3

Query  1041  IAGTTSTLQEQIGWMTNNPPIPVGEIYK  1124
             IA   S L EQ G   NN  I    I+K
Sbjct  210   IA---SKLREQFG---NNKTI----IFK  227


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = +1

Query  1309  MRTQIVRLF*KHWDQRL  1359
             M   I+ L    WDQ L
Sbjct  71    MHEDIISL----WDQSL  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8652  QRRQDILDLW  8681
             Q  +DI  LW
Sbjct  70    QMHEDIISLW  79


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 22/36 (61%)
 Frame = +3

Query  7614  VINLWNRFGITRPGWSGTE------KLT----ITQA  7691
             +I LW+            +      KLT    ITQA
Sbjct  75    IISLWD------------QSLKPCVKLTGGSVITQA  98


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1939  RGNWR  1953
             R NWR
Sbjct  336   RDNWR  340


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8769  YKLVPVEP  8792
             YK V +EP
Sbjct  346   YKVVKIEP  353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6778  CSTNVT  6761
             CS N+T
Sbjct  305   CSSNIT  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6511  TLYCA  6497
             TL+CA
Sbjct  18    TLFCA  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5994  TQACV  5980
             T+ACV
Sbjct  38    THACV  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6138  VNFT  6127
             VNFT
Sbjct  169   VNFT  172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6736  FSYCN  6722
             F YCN
Sbjct  247   FFYCN  251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7037  IINMW  7051
             II +W
Sbjct  75    IISLW  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  2558  LSIPVEAHCT  2529
             L   VE  CT
Sbjct  182   LNTSVEINCT  191


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 7/14 (50%)
 Frame = -1

Query  5461  FY-------NSNWY  5441
             FY       NS W+
Sbjct  248   FYCNSTQLFNSTWF  261


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3597  YCESVTMFTS  3568
             YC S  +F S
Sbjct  249   YCNSTQLFNS  258


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7036  LFYSAW  7019
             LF S W
Sbjct  255   LFNSTW  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6092  IISLW  6106
             II +W
Sbjct  283   IINMW  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7783  IPQTCP  7766
             I Q CP
Sbjct  95    ITQACP  100


>ref|NP_000403.1|  histidine-rich glycoprotein precursor [Homo sapiens]
Length=525

 GENE ID: 3273 HRG | histidine-rich glycoprotein [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 30.8 bits (65),  Expect = 2.0
 Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 13/30 (43%)
 Frame = -1

Query  5860  STT----------DHQHP-K--EHGAPSPP  5810
             STT          DH+HP K  EHG P PP
Sbjct  272   STTKPPFKPHGSRDHHHPHKPHEHGPPPPP  301


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -1

Query  5575  LD--ESDCS  5555
             LD  ESDCS
Sbjct  71    LDVQESDCS  79


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = -1

Query  9037  HSPVPP---RPRLPGKSP  8993
             H P PP   R R PGK P
Sbjct  431   HGP-PPGHLRRRGPGKGP  447


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  883  SCGVAPSD  860
            SC V P D
Sbjct  16   SCAVSPTD  23


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -2

Query  5967  CT--SVSYALA  5941
             CT  SVS ALA
Sbjct  126   CTTSSVSSALA  136


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5278  SHNKNS  5295
             SHN NS
Sbjct  341   SHNNNS  346


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2435  HHPH  2424
             HHPH
Sbjct  369   HHPH  372


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6493  CQHST  6507
             CQH T
Sbjct  327   CQHAT  331


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7924  DPPPNPEG  7947
             DPPP  +G
Sbjct  418   DPPPHNQG  425


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1796  FPQVTL  1813
             FPQV +
Sbjct  512   FPQVSM  517


 Score = 16.3 bits (31),  Expect(2) = 24960
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3249  FPHITM  3232
             FP++ M
Sbjct  512   FPQVSM  517


 Score = 15.5 bits (29),  Expect(2) = 24960
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3293  FPMFP  3279
             FP FP
Sbjct  477   FPSFP  481


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2232  FPSF  2221
             FPSF
Sbjct  477   FPSF  480


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8139  HPLRP  8125
             HPL P
Sbjct  487   HPLKP  491


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  6701  RGPG---RAF  6721
             RGPG   R F
Sbjct  441   RGPGKGPRPF  450


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  764  YHLPLDV  744
            Y L LDV
Sbjct  67   YYLVLDV  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7616  NKSLE  7630
             NK LE
Sbjct  159   NKALE  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5129  GPQREPHN  5152
             G QR  HN
Sbjct  336   GAQRHSHN  343


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  529  NHPFRQ  546
            N+PF Q
Sbjct  493  NQPFPQ  498


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6079  LFYHV  6065
             LFY V
Sbjct  222   LFYDV  226


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4201  LQSPK  4215
             L+SPK
Sbjct  231   LESPK  235


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2739  VSPHL  2725
             V PHL
Sbjct  255   VPPHL  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5845  QHPKEH  5828
             +HP EH
Sbjct  369   HHPHEH  374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2435  HHPHP  2421
             HH HP
Sbjct  484   HHKHP  488


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQ VS
Sbjct  497   PQSVS  501


>pdb|1ZLS|L  Chain L, Fab 2g12 + Man4
 pdb|1ZLU|L  Chain L, Fab 2g12 + Man5
 pdb|1ZLU|K  Chain K, Fab 2g12 + Man5
 8 more sequence titles
 pdb|1ZLV|L  Chain L, Fab 2g12 + Man7
 pdb|1ZLV|K  Chain K, Fab 2g12 + Man7
 pdb|1ZLW|L  Chain L, Fab 2g12 + Man8
 pdb|1ZLW|K  Chain K, Fab 2g12 + Man8
 pdb|2OQJ|A  Chain A, Crystal Structure Analysis Of Fab 2g12 In Complex With 
Peptide 2g12.1
 pdb|2OQJ|D  Chain D, Crystal Structure Analysis Of Fab 2g12 In Complex With 
Peptide 2g12.1
 pdb|2OQJ|G  Chain G, Crystal Structure Analysis Of Fab 2g12 In Complex With 
Peptide 2g12.1
 pdb|2OQJ|J  Chain J, Crystal Structure Analysis Of Fab 2g12 In Complex With 
Peptide 2g12.1
Length=211


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 30.3 bits (64),  Expect = 2.7
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
 Frame = +2

Query  7004  DTITLPCRIKQIINMW-----QKVGKA  7069
             DTIT  CR  Q I  W     QK GKA
Sbjct  16    DTITITCRASQSIETWLAWYQQKPGKA  42


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  31    WLAWY  35


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2032  TYTCQH  2049
             TY CQH
Sbjct  84    TYHCQH  89


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  189   KVYACEVTH  197


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  4     TQSPS  8


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  167   SKDSTYSLSSTLT-LS  181


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  176   STLTL  180


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  777  SPRTLNAWV  803
            SP TL A V
Sbjct  6    SPSTLSASV  14


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2634  SINTWM  2651
             SI TW+
Sbjct  27    SIETWL  32


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  104   EIKRTV  109


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7649  TWMEW  7663
             TW+ W
Sbjct  30    TWLAW  34


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  115  FIFPP  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  167   SKDSTY  172


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6393  TFGQ  6382
             TFGQ
Sbjct  96    TFGQ  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  170   STYSL  174


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  195   VTHQGLSSPV  204


>pdb|1OM3|L  Chain L, Fab 2g12 Unliganded
 pdb|1OM3|M  Chain M, Fab 2g12 Unliganded
 pdb|1OP3|L  Chain L, Crystal Structure Of Fab 2g12 Bound To Man1->2man
 pdb|1OP3|K  Chain K, Crystal Structure Of Fab 2g12 Bound To Man1->2man
 pdb|1OP5|L  Chain L, Crystal Structure Of Fab 2g12 Bound To Man9glcnac2
 pdb|1OP5|K  Chain K, Crystal Structure Of Fab 2g12 Bound To Man9glcnac2
Length=212


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 30.3 bits (64),  Expect = 2.7
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
 Frame = +2

Query  7004  DTITLPCRIKQIINMW-----QKVGKA  7069
             DTIT  CR  Q I  W     QK GKA
Sbjct  16    DTITITCRASQSIETWLAWYQQKPGKA  42


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  31    WLAWY  35


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2032  TYTCQH  2049
             TY CQH
Sbjct  84    TYHCQH  89


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  189   KVYACEVTH  197


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  4     TQSPS  8


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  167   SKDSTYSLSSTLT-LS  181


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  176   STLTL  180


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  777  SPRTLNAWV  803
            SP TL A V
Sbjct  6    SPSTLSASV  14


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2634  SINTWM  2651
             SI TW+
Sbjct  27    SIETWL  32


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  104   EIKRTV  109


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7649  TWMEW  7663
             TW+ W
Sbjct  30    TWLAW  34


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  115  FIFPP  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  167   SKDSTY  172


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6393  TFGQ  6382
             TFGQ
Sbjct  96    TFGQ  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  170   STYSL  174


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  195   VTHQGLSSPV  204


>ref|NP_002151.2|  tenascin precursor [Homo sapiens]
Length=2201

 GENE ID: 3371 TNC | tenascin C [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.9 bits (63),  Expect = 3.7
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 8/31 (25%)
 Frame = +3

Query  1239  KTLRAE---QASQEVKNWMTETLLVQNANPD  1322
             K LRAE   +A  EV N     LLV +A PD
Sbjct  1609  KPLRAEIVTEAEPEVDN-----LLVSDATPD  1634


 Score = 27.4 bits (57),  Expect =    21
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 13/25 (52%)
 Frame = +1

Query  2176  RRKNKSISRNLYRDGKGRENF-KNW  2247
             RRKN            GRENF  NW
Sbjct  2028  RRKN------------GRENFYQNW  2040


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1411  RQEFWL  1428
             R+EFWL
Sbjct  2051  REEFWL  2056


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  5853  QI-----INIPR  5833
             QI     INIPR
Sbjct  97    QIVFTHRINIPR  108


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 6/15 (40%)
 Frame = +1

Query  5893  GTCVEGSNHHSILCI  5937
             GTCV+G      LC+
Sbjct  261   GTCVDG------LCV  269


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 12/23 (52%)
 Frame = -2

Query  1146  LIPGLSIFYKFLLLG*VDYLSSI  1078
             LIPG            V+YL SI
Sbjct  1769  LIPG------------VEYLVSI  1779


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8135  GWEALK  8152
             GW+ALK
Sbjct  1177  GWDALK  1182


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 5/28 (17%)
 Frame = +3

Query  8787  EPDKIEEANKGENTSLLHPVSLHGMDDP  8870
             E D +EEA       L  P SL  M+ P
Sbjct  1292  EADQVEEAH-----NLTVPGSLRSMEIP  1314


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6697  PERTRE  6714
             PERTR+
Sbjct  1671  PERTRD  1676


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6329  DTTSYKL  6349
             DTTSY L
Sbjct  1936  DTTSYSL  1942


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +2

Query  6011  PQEVVLVNVTEN  6046
             P EV+  ++TEN
Sbjct  1713  PKEVIFSDITEN  1724


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  135  SYQSHTTDG  109
            S+Q HT DG
Sbjct  86   SFQEHTVDG  94


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8843  CEPAWDG  8863
             CEP W G
Sbjct  176   CEPGWKG  182


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5108  EQAPE  5122
             EQAPE
Sbjct  1072  EQAPE  1076


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 10/31 (32%)
 Frame = +2

Query  2834  PEKDSWTVNDIQKLVG----KLNW--ASQIY  2908
             PE +  TV +    VG     LNW  A Q Y
Sbjct  1075  PELENLTVTE----VGWDGLRLNWTAADQAY  1101


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  562   DHYIIQ  579
             +H+IIQ
Sbjct  1102  EHFIIQ  1107


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9091  ETQYRQ  9074
             ET YRQ
Sbjct  765   ETSYRQ  770


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8883  LEWR  8894
             LEWR
Sbjct  911   LEWR  914


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4855  LHSMETP  4835
             L SME P
Sbjct  1308  LRSMEIP  1314


 Score = 16.8 bits (32),  Expect(2) = 11525
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  502  PSDVSNRPGL  473
            P D SNR GL
Sbjct  502  PRDCSNR-GL  510


 Score = 15.5 bits (29),  Expect(2) = 11525
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  526  SCPSICLQ  503
            SCP  C Q
Sbjct  469  SCPNDCHQ  476


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 6/23 (26%)
 Frame = -1

Query  7603  IPRHSSG-ANEFSRATPNPQELL  7538
             IPR   G A     A P+  ELL
Sbjct  106   IPRRACGCA-----AAPDVKELL  123


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6537  DTTGLI  6520
             DTT LI
Sbjct  816   DTTALI  821


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2882  KLNW  2893
             KLNW
Sbjct  1182  KLNW  1185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1525  LPQLKHLTI  1499
             LP L  LTI
Sbjct  1529  LPLLENLTI  1537


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  2844  TAGLSMTY---RS  2873
             TAG SM Y   RS
Sbjct  2109  TAGDSMAYHNGRS  2121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3680  EKVYLAW  3700
             E V LAW
Sbjct  637   ETVNLAW  643


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5773  ESEGEI  5790
             E EGEI
Sbjct  752   EDEGEI  757


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7282  SGAER  7296
             SGAER
Sbjct  1487  SGAER  1491


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  5155  MDTRAF---RG  5178
             +DTR F   RG
Sbjct  155   LDTRPFCSGRG  165


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4959  LGHIVSPRC  4985
             LG+ VS RC
Sbjct  601   LGQCVSGRC  609


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2509  LIVYT  2495
             L+VYT
Sbjct  653   LVVYT  657


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  609  IEIKD  623
            IE+KD
Sbjct  809  IEVKD  813


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8039  WDDLR  8053
             WD LR
Sbjct  1269  WDALR  1273


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4835  GSLHRME  4855
             GSL  ME
Sbjct  1306  GSLRSME  1312


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5693  SMITMD  5676
             SM+T D
Sbjct  1753  SMVTVD  1758


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7763  YLIPII  7746
             YL+ II
Sbjct  1775  YLVSII  1780


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +3

Query  1128  WIILGL---NKI  1154
             W  LGL   NKI
Sbjct  2055  W--LGLDNLNKI  2064


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8107  EDCG  8118
             EDCG
Sbjct  339   EDCG  342


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2175  VNGHC  2161
             VNG+C
Sbjct  419   VNGQC  423


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2175  VNGHC  2161
             VNG+C
Sbjct  543   VNGQC  547


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6987  ITLKEVTQ  7010
             IT   VTQ
Sbjct  1233  ITIRGVTQ  1240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5880  VTHNFS  5863
             VT++FS
Sbjct  1238  VTQDFS  1243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/12 (41%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +2

Query  7586  TAVPWNA---SW  7612
             T V W+A    W
Sbjct  1265  TEVSWDALRLNW  1276


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  3954  IPGLQSTCPCMASPF  3910
             IPGL+      A P+
Sbjct  1404  IPGLEA-----ATPY  1413


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  5400  RALEASRKSA  5429
             R LE  RK A
Sbjct  2192  RNLEGRRKRA  2201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5019  LQYLALA  5039
             L +LALA
Sbjct  13    LAFLALA  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5771  MRVKE  5785
             MRV E
Sbjct  647   MRVTE  651


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  6617  TIIVQLNTSVE  6649
             TII +L   VE
Sbjct  677   TIIQELEPGVE  687


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  5270  GVEAIIR---ILQ  5299
             GVE  IR   IL+
Sbjct  685   GVEYFIRVFAILE  697


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2324  FRELNK  2341
             FR +NK
Sbjct  746   FRNMNK  751


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6702  EDQGE  6716
             ED+GE
Sbjct  752   EDEGE  756


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6984  QITLKEVT  7007
             QI  K+VT
Sbjct  808   QIEVKDVT  815


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6102  YGIK  6113
             YGIK
Sbjct  837   YGIK  840


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  488  RNIRR  502
            RN RR
Sbjct  897  RNLRR  901


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  6976  STPSTIKPST  6947
             S P TI   T
Sbjct  974   SNPATINAAT  983


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8024  SLALIW  8041
             SL L W
Sbjct  1000  SLTLLW  1005


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7668  EKLTITQ  7688
             E LT+T+
Sbjct  1078  ENLTVTE  1084


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  562   DHYIIQ  579
             +H++IQ
Sbjct  1375  EHFVIQ  1380


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5564  RLIKL  5578
             RL+KL
Sbjct  1765  RLVKL  1769


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2812  DSTAYS  2829
             D T YS
Sbjct  1936  DTTSYS  1941


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1608  DCTERQ  1625
             DC +RQ
Sbjct  495   DCRDRQ  500


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3056  PSKDLI  3073
             P KDL+
Sbjct  625   PPKDLV  630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  2216  MEKE--GKISK  2242
             M KE  G I K
Sbjct  749   MNKEDEGEITK  759


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = -2

Query  5289  LI-----MASTPA  5266
             LI     M S PA
Sbjct  873   LISRRGDMSSNPA  885


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  190   EQGPE  204
             EQ PE
Sbjct  1072  EQAPE  1076


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 3/10 (30%)
 Frame = -2

Query  2244  IFEIFPSFSI  2215
             IFE    F I
Sbjct  1464  IFE---TFTI  1470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  3545  DKLLVTQSSD  3516
             D LLV   SD
Sbjct  1624  DNLLV---SD  1630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2123  VKLKPGMD  2146
             VKL PG +
Sbjct  1767  VKLIPGVE  1774


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1934  FLVSI  1920
             +LVSI
Sbjct  1775  YLVSI  1779


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8281  TSSLYYFY  8258
             TS LY  Y
Sbjct  1994  TSGLYTIY  2001


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8461  CFSRSR  8444
             CF R R
Sbjct  319   CFDRGR  324


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3569  EVNIVTD  3589
             EV  VTD
Sbjct  810   EVKDVTD  816


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8889  TLTLLSPG  8866
             TLT L PG
Sbjct  951   TLTGLRPG  958


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  5004  NKVGSLQYLAL  5036
             NKV   Q L L
Sbjct  1385  NKVEAAQNLTL  1395


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  120   TTDGHTLLEAL  88
             TT+   LLE L
Sbjct  1525  TTEALPLLENL  1535


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7668  EKLTI  7682
             E LTI
Sbjct  1533  ENLTI  1537


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8883  TLLSP  8869
             TLL P
Sbjct  1667  TLLAP  1671


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5955  SYALA  5941
             SY LA
Sbjct  1939  SYSLA  1943


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1397  SYSL  1386
             SYSL
Sbjct  1939  SYSL  1942


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  812   RREGF  826
             RRE F
Sbjct  2050  RREEF  2054


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  727   FWL  719
             FWL
Sbjct  2054  FWL  2056


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/13 (38%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  3693  WHGYQHTKELEEM  3731
             W G +H  +  EM
Sbjct  2172  WKGHEHSIQFAEM  2184


>ref|NP_001167629.1|  zinc finger protein ZFAT isoform 4 [Homo sapiens]
Length=1145

 GENE ID: 57623 ZFAT | zinc finger and AT hook domain containing [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.5 bits (62),  Expect = 4.9
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
 Frame = -3

Query  8969  SMSAVLEVL--RMQLSG----HVMKC  8910
             SMS + EVL  R QL G      MKC
Sbjct  845   SMSTISEVLGRRVQLKGLIGKRAMKC  870


 Score = 18.9 bits (37),  Expect(2) =  1815
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = +2

Query  5162  LELLEE---------LKNEA  5194
             L+L EE         LK EA
Sbjct  504   LQLVEEEFALQGVNALKEEA  523


 Score = 18.0 bits (35),  Expect(2) =  1815
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5033  TSSIN  5047
             TSSIN
Sbjct  479   TSSIN  483


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  9078  GKKQLL----IC  9055
             GK QLL    IC
Sbjct  386   GKRQLLYDCHIC  397


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3564  PESCKA  3547
             P+SCKA
Sbjct  687   PDSCKA  692


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5937  QMLKHMIQ  5960
             Q+L HM Q
Sbjct  968   QLLRHMEQ  975


 Score = 18.5 bits (36),  Expect(2) =  6099
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -2

Query  9042  LATPQSRPGHASLES---PQRKVPCSKLD---VSSS  8953
             LA PQ        ES   P    PC  L+   VSSS
Sbjct  550   LASPQA-------ESTALP----PC-ELETTVVSSS  573


 Score = 15.9 bits (30),  Expect(2) =  6099
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8899  SNLHS  8885
             S+LHS
Sbjct  573   SDLHS  577


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5090  FRNTRQ  5073
             F NTRQ
Sbjct  113   FSNTRQ  118


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  9180  KHSRQALLR  9154
             KHS QA LR
Sbjct  271   KHSLQAHLR  279


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  95   KHSRQALLR  69
            KHS QA LR
Sbjct  271  KHSLQAHLR  279


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6170  LKNDT  6184
             LKNDT
Sbjct  587   LKNDT  591


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8111  IVELLGRR  8134
             I E LGRR
Sbjct  849   ISEVLGRR  856


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             K VPVE
Sbjct  203   KIVPVE  208


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  627  KEALD  641
            KEALD
Sbjct  373  KEALD  377


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3120  IKSHLK  3137
             IKSH K
Sbjct  833   IKSHIK  838


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2704  LYFCS  2690
             LY+CS
Sbjct  757   LYYCS  761


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4523  VIQDNSDI  4546
             VIQ  S+I
Sbjct  777   VIQKHSNI  784


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  6465  RSMEQDHV  6488
             R MEQ HV
Sbjct  971   RHMEQ-HV  977


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8562  VPLRPM  8579
             +PLRP+
Sbjct  35    IPLRPL  40


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6998  GSDTIT  7015
             G DTIT
Sbjct  679   GGDTIT  684


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4133  CCHCQY  4116
             C HC+Y
Sbjct  984   CAHCHY  989


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  7573  FSRATPNPQELL  7538
             FS   PN  ELL
Sbjct  8     FS---PNQSELL  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3407  ETFYVDGAANRET  3445
             ET    GA N ET
Sbjct  213   ET----GATNSET  221


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4883  VYLCAI  4866
             VY CA+
Sbjct  445   VYVCAV  450


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5993  HRHVW  5979
             +RH+W
Sbjct  885   QRHIW  889


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            L PSSL
Sbjct  99   LPPSSL  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5761  DSGNESE  5781
             + GNES+
Sbjct  136   EAGNESD  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4650  KSLVKH  4667
             K L+KH
Sbjct  355   KNLIKH  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7890  ELGRDIH  7910
             EL RD H
Sbjct  404   ELDRDRH  410


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  1886  DTVLEEMSLPGR  1921
             DT LEE    GR
Sbjct  527   DTQLEE----GR  534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7627  GTDLESH  7647
             G D ESH
Sbjct  630   GSDQESH  636


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1860  SFSCP  1846
             S+SCP
Sbjct  817   SYSCP  821


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2292  FFFMAN  2275
             F+FM N
Sbjct  875   FYFMKN  880


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1982  SDHTVL  1965
             S+HTV+
Sbjct  1074  SNHTVM  1079


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3364  EIMVPVR  3384
             EI +P R
Sbjct  32    EIIIPLR  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  4351  PNPPFSFKIVDEY  4313
             P PP S K  DE+
Sbjct  43    PEPPNSSKTGDEF  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7127  LLTRDG  7144
             L+TR+G
Sbjct  381   LMTREG  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6857  QSSGGDPE  6880
             QS G D E
Sbjct  627   QSAGSDQE  634


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7728  KKRMN  7742
             KK MN
Sbjct  712   KKQMN  716


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6004  VCGYT  5990
             VC YT
Sbjct  958   VCDYT  962


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3147  QENMQ  3161
             QE MQ
Sbjct  1127  QEAMQ  1131


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2952  VPLRSL  2935
             +PLR L
Sbjct  35    IPLRPL  40


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5307  SSCCR  5293
             S CCR
Sbjct  107   SKCCR  111


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3123  KSHLKI  3140
             K HLK+
Sbjct  326   KGHLKV  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7274  KRRVVQ  7291
             KR V+Q
Sbjct  774   KRHVIQ  779


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3229  KHSN  3240
             KHSN
Sbjct  780   KHSN  783


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2023  YCTYSFM  2003
             YC + FM
Sbjct  872   YCDFYFM  878


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3176  HTNDVKQ  3196
             HT D KQ
Sbjct  947   HTADGKQ  953


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3226  RKHSN  3240
             RKH N
Sbjct  1003  RKHPN  1007


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQ  QE
Sbjct  1139  EQPAQE  1144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3371  IISLR  3357
             II LR
Sbjct  34    IIPLR  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  184  APEQG  198
            APE+G
Sbjct  92   APEEG  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6042  KILTC  6056
             KI TC
Sbjct  257   KIFTC  261


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3160  KNEGCP  3177
             K E CP
Sbjct  520   KEEACP  525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6326  NDTTS  6340
             NDT S
Sbjct  589   NDTSS  593


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1027  QGEV  1038
             QGEV
Sbjct  615   QGEV  618


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  632  SFRQDR  649
            SF +DR
Sbjct  826  SFSEDR  831


>ref|NP_001167628.1|  zinc finger protein ZFAT isoform 3 [Homo sapiens]
Length=1181

 GENE ID: 57623 ZFAT | zinc finger and AT hook domain containing [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.5 bits (62),  Expect = 4.9
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
 Frame = -3

Query  8969  SMSAVLEVL--RMQLSG----HVMKC  8910
             SMS + EVL  R QL G      MKC
Sbjct  795   SMSTISEVLGRRVQLKGLIGKRAMKC  820


 Score = 18.9 bits (37),  Expect(2) =  1795
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = +2

Query  5162  LELLEE---------LKNEA  5194
             L+L EE         LK EA
Sbjct  454   LQLVEEEFALQGVNALKEEA  473


 Score = 18.0 bits (35),  Expect(2) =  1795
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5033  TSSIN  5047
             TSSIN
Sbjct  429   TSSIN  433


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  9078  GKKQLL----IC  9055
             GK QLL    IC
Sbjct  336   GKRQLLYDCHIC  347


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  2033  PTPVNIIGRNLLTQI  2077
             PT VNI     L QI
Sbjct  1064  PTAVNI-----LQQI  1073


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3564  PESCKA  3547
             P+SCKA
Sbjct  637   PDSCKA  642


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5937  QMLKHMIQ  5960
             Q+L HM Q
Sbjct  918   QLLRHMEQ  925


 Score = 18.5 bits (36),  Expect(2) =  6032
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -2

Query  9042  LATPQSRPGHASLES---PQRKVPCSKLD---VSSS  8953
             LA PQ        ES   P    PC  L+   VSSS
Sbjct  500   LASPQA-------ESTALP----PC-ELETTVVSSS  523


 Score = 15.9 bits (30),  Expect(2) =  6032
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8899  SNLHS  8885
             S+LHS
Sbjct  523   SDLHS  527


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5090  FRNTRQ  5073
             F NTRQ
Sbjct  125   FSNTRQ  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  9180  KHSRQALLR  9154
             KHS QA LR
Sbjct  221   KHSLQAHLR  229


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  95   KHSRQALLR  69
            KHS QA LR
Sbjct  221  KHSLQAHLR  229


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6170  LKNDT  6184
             LKNDT
Sbjct  537   LKNDT  541


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8111  IVELLGRR  8134
             I E LGRR
Sbjct  799   ISEVLGRR  806


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             K VPVE
Sbjct  153   KIVPVE  158


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  627  KEALD  641
            KEALD
Sbjct  323  KEALD  327


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3120  IKSHLK  3137
             IKSH K
Sbjct  783   IKSHIK  788


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2704  LYFCS  2690
             LY+CS
Sbjct  707   LYYCS  711


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4523  VIQDNSDI  4546
             VIQ  S+I
Sbjct  727   VIQKHSNI  734


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  6465  RSMEQDHV  6488
             R MEQ HV
Sbjct  921   RHMEQ-HV  927


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3188  VKQLTE  3205
             VKQ TE
Sbjct  1100  VKQVTE  1105


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8562  VPLRPM  8579
             +PLRP+
Sbjct  47    IPLRPL  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6998  GSDTIT  7015
             G DTIT
Sbjct  629   GGDTIT  634


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4133  CCHCQY  4116
             C HC+Y
Sbjct  934   CAHCHY  939


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  7573  FSRATPNPQELL  7538
             FS   PN  ELL
Sbjct  20    FS---PNQSELL  28


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3407  ETFYVDGAANRET  3445
             ET    GA N ET
Sbjct  163   ET----GATNSET  171


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4883  VYLCAI  4866
             VY CA+
Sbjct  395   VYVCAV  400


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5993  HRHVW  5979
             +RH+W
Sbjct  835   QRHIW  839


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8689  THKATSLIS  8715
             TH AT L S
Sbjct  1080  THDATALAS  1088


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            L PSSL
Sbjct  111  LPPSSL  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4650  KSLVKH  4667
             K L+KH
Sbjct  305   KNLIKH  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7890  ELGRDIH  7910
             EL RD H
Sbjct  354   ELDRDRH  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  1886  DTVLEEMSLPGR  1921
             DT LEE    GR
Sbjct  477   DTQLEE----GR  484


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7627  GTDLESH  7647
             G D ESH
Sbjct  580   GSDQESH  586


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1860  SFSCP  1846
             S+SCP
Sbjct  767   SYSCP  771


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2292  FFFMAN  2275
             F+FM N
Sbjct  825   FYFMKN  830


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1982  SDHTVL  1965
             S+HTV+
Sbjct  1110  SNHTVM  1115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3364  EIMVPVR  3384
             EI +P R
Sbjct  44    EIIIPLR  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  4351  PNPPFSFKIVDEY  4313
             P PP S K  DE+
Sbjct  55    PEPPNSSKTGDEF  67


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7127  LLTRDG  7144
             L+TR+G
Sbjct  331   LMTREG  336


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6857  QSSGGDPE  6880
             QS G D E
Sbjct  577   QSAGSDQE  584


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7728  KKRMN  7742
             KK MN
Sbjct  662   KKQMN  666


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6004  VCGYT  5990
             VC YT
Sbjct  908   VCDYT  912


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3147  QENMQ  3161
             QE MQ
Sbjct  1163  QEAMQ  1167


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2952  VPLRSL  2935
             +PLR L
Sbjct  47    IPLRPL  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5307  SSCCR  5293
             S CCR
Sbjct  119   SKCCR  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3123  KSHLKI  3140
             K HLK+
Sbjct  276   KGHLKV  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7274  KRRVVQ  7291
             KR V+Q
Sbjct  724   KRHVIQ  729


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3229  KHSN  3240
             KHSN
Sbjct  730   KHSN  733


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2023  YCTYSFM  2003
             YC + FM
Sbjct  822   YCDFYFM  828


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3176  HTNDVKQ  3196
             HT D KQ
Sbjct  897   HTADGKQ  903


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3226  RKHSN  3240
             RKH N
Sbjct  953   RKHPN  957


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +3

Query  4278  RL-----NILRQ  4298
             RL     NIL Q
Sbjct  1061  RLDPTAVNILQQ  1072


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQ  QE
Sbjct  1175  EQPAQE  1180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3371  IISLR  3357
             II LR
Sbjct  46    IIPLR  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  184  APEQG  198
            APE+G
Sbjct  104  APEEG  108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6042  KILTC  6056
             KI TC
Sbjct  207   KIFTC  211


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3160  KNEGCP  3177
             K E CP
Sbjct  470   KEEACP  475


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6326  NDTTS  6340
             NDT S
Sbjct  539   NDTSS  543


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1027  QGEV  1038
             QGEV
Sbjct  565   QGEV  568


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  632  SFRQDR  649
            SF +DR
Sbjct  776  SFSEDR  781


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1757  EAGADRQGT  1783
             EA  D QGT
Sbjct  1034  EAEEDVQGT  1042


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4984  VNIKQDI  5004
             VNI Q I
Sbjct  1067  VNILQQI  1073


>ref|NP_001161055.1|  zinc finger protein ZFAT isoform 2 [Homo sapiens]
 ref|NP_001025110.2|  zinc finger protein ZFAT isoform 2 [Homo sapiens]
Length=1231

 GENE ID: 57623 ZFAT | zinc finger and AT hook domain containing [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.5 bits (62),  Expect = 4.9
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
 Frame = -3

Query  8969  SMSAVLEVL--RMQLSG----HVMKC  8910
             SMS + EVL  R QL G      MKC
Sbjct  845   SMSTISEVLGRRVQLKGLIGKRAMKC  870


 Score = 18.9 bits (37),  Expect(2) =  1780
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = +2

Query  5162  LELLEE---------LKNEA  5194
             L+L EE         LK EA
Sbjct  504   LQLVEEEFALQGVNALKEEA  523


 Score = 18.0 bits (35),  Expect(2) =  1780
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5033  TSSIN  5047
             TSSIN
Sbjct  479   TSSIN  483


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  9078  GKKQLL----IC  9055
             GK QLL    IC
Sbjct  386   GKRQLLYDCHIC  397


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  2033  PTPVNIIGRNLLTQI  2077
             PT VNI     L QI
Sbjct  1114  PTAVNI-----LQQI  1123


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3564  PESCKA  3547
             P+SCKA
Sbjct  687   PDSCKA  692


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5937  QMLKHMIQ  5960
             Q+L HM Q
Sbjct  968   QLLRHMEQ  975


 Score = 18.5 bits (36),  Expect(2) =  5941
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -2

Query  9042  LATPQSRPGHASLES---PQRKVPCSKLD---VSSS  8953
             LA PQ        ES   P    PC  L+   VSSS
Sbjct  550   LASPQA-------ESTALP----PC-ELETTVVSSS  573


 Score = 15.9 bits (30),  Expect(2) =  5941
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8899  SNLHS  8885
             S+LHS
Sbjct  573   SDLHS  577


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5090  FRNTRQ  5073
             F NTRQ
Sbjct  113   FSNTRQ  118


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  9180  KHSRQALLR  9154
             KHS QA LR
Sbjct  271   KHSLQAHLR  279


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  95   KHSRQALLR  69
            KHS QA LR
Sbjct  271  KHSLQAHLR  279


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6170  LKNDT  6184
             LKNDT
Sbjct  587   LKNDT  591


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8111  IVELLGRR  8134
             I E LGRR
Sbjct  849   ISEVLGRR  856


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             K VPVE
Sbjct  203   KIVPVE  208


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  627  KEALD  641
            KEALD
Sbjct  373  KEALD  377


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3120  IKSHLK  3137
             IKSH K
Sbjct  833   IKSHIK  838


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2704  LYFCS  2690
             LY+CS
Sbjct  757   LYYCS  761


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4523  VIQDNSDI  4546
             VIQ  S+I
Sbjct  777   VIQKHSNI  784


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  6465  RSMEQDHV  6488
             R MEQ HV
Sbjct  971   RHMEQ-HV  977


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3188  VKQLTE  3205
             VKQ TE
Sbjct  1150  VKQVTE  1155


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8562  VPLRPM  8579
             +PLRP+
Sbjct  35    IPLRPL  40


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6998  GSDTIT  7015
             G DTIT
Sbjct  679   GGDTIT  684


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4133  CCHCQY  4116
             C HC+Y
Sbjct  984   CAHCHY  989


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  7573  FSRATPNPQELL  7538
             FS   PN  ELL
Sbjct  8     FS---PNQSELL  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3407  ETFYVDGAANRET  3445
             ET    GA N ET
Sbjct  213   ET----GATNSET  221


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4883  VYLCAI  4866
             VY CA+
Sbjct  445   VYVCAV  450


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5993  HRHVW  5979
             +RH+W
Sbjct  885   QRHIW  889


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8689  THKATSLIS  8715
             TH AT L S
Sbjct  1130  THDATALAS  1138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            L PSSL
Sbjct  99   LPPSSL  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5761  DSGNESE  5781
             + GNES+
Sbjct  136   EAGNESD  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4650  KSLVKH  4667
             K L+KH
Sbjct  355   KNLIKH  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7890  ELGRDIH  7910
             EL RD H
Sbjct  404   ELDRDRH  410


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  1886  DTVLEEMSLPGR  1921
             DT LEE    GR
Sbjct  527   DTQLEE----GR  534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7627  GTDLESH  7647
             G D ESH
Sbjct  630   GSDQESH  636


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1860  SFSCP  1846
             S+SCP
Sbjct  817   SYSCP  821


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2292  FFFMAN  2275
             F+FM N
Sbjct  875   FYFMKN  880


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1982  SDHTVL  1965
             S+HTV+
Sbjct  1160  SNHTVM  1165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3364  EIMVPVR  3384
             EI +P R
Sbjct  32    EIIIPLR  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  4351  PNPPFSFKIVDEY  4313
             P PP S K  DE+
Sbjct  43    PEPPNSSKTGDEF  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7127  LLTRDG  7144
             L+TR+G
Sbjct  381   LMTREG  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6857  QSSGGDPE  6880
             QS G D E
Sbjct  627   QSAGSDQE  634


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7728  KKRMN  7742
             KK MN
Sbjct  712   KKQMN  716


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6004  VCGYT  5990
             VC YT
Sbjct  958   VCDYT  962


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3147  QENMQ  3161
             QE MQ
Sbjct  1213  QEAMQ  1217


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2952  VPLRSL  2935
             +PLR L
Sbjct  35    IPLRPL  40


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5307  SSCCR  5293
             S CCR
Sbjct  107   SKCCR  111


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3123  KSHLKI  3140
             K HLK+
Sbjct  326   KGHLKV  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7274  KRRVVQ  7291
             KR V+Q
Sbjct  774   KRHVIQ  779


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3229  KHSN  3240
             KHSN
Sbjct  780   KHSN  783


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2023  YCTYSFM  2003
             YC + FM
Sbjct  872   YCDFYFM  878


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3176  HTNDVKQ  3196
             HT D KQ
Sbjct  947   HTADGKQ  953


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3226  RKHSN  3240
             RKH N
Sbjct  1003  RKHPN  1007


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +3

Query  4278  RL-----NILRQ  4298
             RL     NIL Q
Sbjct  1111  RLDPTAVNILQQ  1122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQ  QE
Sbjct  1225  EQPAQE  1230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3371  IISLR  3357
             II LR
Sbjct  34    IIPLR  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  184  APEQG  198
            APE+G
Sbjct  92   APEEG  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6042  KILTC  6056
             KI TC
Sbjct  257   KIFTC  261


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3160  KNEGCP  3177
             K E CP
Sbjct  520   KEEACP  525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6326  NDTTS  6340
             NDT S
Sbjct  589   NDTSS  593


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1027  QGEV  1038
             QGEV
Sbjct  615   QGEV  618


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  632  SFRQDR  649
            SF +DR
Sbjct  826  SFSEDR  831


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1757  EAGADRQGT  1783
             EA  D QGT
Sbjct  1084  EAEEDVQGT  1092


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4984  VNIKQDI  5004
             VNI Q I
Sbjct  1117  VNILQQI  1123


>ref|NP_065914.2|  zinc finger protein ZFAT isoform 1 [Homo sapiens]
 sp|Q9P243.2|ZFAT_HUMAN  RecName: Full=Zinc finger protein ZFAT; AltName: Full=Zinc finger 
gene in AITD susceptibility region; AltName: Full=Zinc 
finger protein 406
Length=1243

 GENE ID: 57623 ZFAT | zinc finger and AT hook domain containing [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.5 bits (62),  Expect = 4.9
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
 Frame = -3

Query  8969  SMSAVLEVL--RMQLSG----HVMKC  8910
             SMS + EVL  R QL G      MKC
Sbjct  857   SMSTISEVLGRRVQLKGLIGKRAMKC  882


 Score = 18.9 bits (37),  Expect(2) =  1777
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = +2

Query  5162  LELLEE---------LKNEA  5194
             L+L EE         LK EA
Sbjct  516   LQLVEEEFALQGVNALKEEA  535


 Score = 18.0 bits (35),  Expect(2) =  1777
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5033  TSSIN  5047
             TSSIN
Sbjct  491   TSSIN  495


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  9078  GKKQLL----IC  9055
             GK QLL    IC
Sbjct  398   GKRQLLYDCHIC  409


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  2033  PTPVNIIGRNLLTQI  2077
             PT VNI     L QI
Sbjct  1126  PTAVNI-----LQQI  1135


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3564  PESCKA  3547
             P+SCKA
Sbjct  699   PDSCKA  704


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5937  QMLKHMIQ  5960
             Q+L HM Q
Sbjct  980   QLLRHMEQ  987


 Score = 18.5 bits (36),  Expect(2) =  5920
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -2

Query  9042  LATPQSRPGHASLES---PQRKVPCSKLD---VSSS  8953
             LA PQ        ES   P    PC  L+   VSSS
Sbjct  562   LASPQA-------ESTALP----PC-ELETTVVSSS  585


 Score = 15.9 bits (30),  Expect(2) =  5920
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8899  SNLHS  8885
             S+LHS
Sbjct  585   SDLHS  589


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5090  FRNTRQ  5073
             F NTRQ
Sbjct  125   FSNTRQ  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  9180  KHSRQALLR  9154
             KHS QA LR
Sbjct  283   KHSLQAHLR  291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  95   KHSRQALLR  69
            KHS QA LR
Sbjct  283  KHSLQAHLR  291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6170  LKNDT  6184
             LKNDT
Sbjct  599   LKNDT  603


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8111  IVELLGRR  8134
             I E LGRR
Sbjct  861   ISEVLGRR  868


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             K VPVE
Sbjct  215   KIVPVE  220


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  627  KEALD  641
            KEALD
Sbjct  385  KEALD  389


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3120  IKSHLK  3137
             IKSH K
Sbjct  845   IKSHIK  850


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2704  LYFCS  2690
             LY+CS
Sbjct  769   LYYCS  773


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4523  VIQDNSDI  4546
             VIQ  S+I
Sbjct  789   VIQKHSNI  796


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  6465  RSMEQDHV  6488
             R MEQ HV
Sbjct  983   RHMEQ-HV  989


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3188  VKQLTE  3205
             VKQ TE
Sbjct  1162  VKQVTE  1167


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8562  VPLRPM  8579
             +PLRP+
Sbjct  47    IPLRPL  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6998  GSDTIT  7015
             G DTIT
Sbjct  691   GGDTIT  696


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4133  CCHCQY  4116
             C HC+Y
Sbjct  996   CAHCHY  1001


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  7573  FSRATPNPQELL  7538
             FS   PN  ELL
Sbjct  20    FS---PNQSELL  28


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3407  ETFYVDGAANRET  3445
             ET    GA N ET
Sbjct  225   ET----GATNSET  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4883  VYLCAI  4866
             VY CA+
Sbjct  457   VYVCAV  462


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5993  HRHVW  5979
             +RH+W
Sbjct  897   QRHIW  901


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8689  THKATSLIS  8715
             TH AT L S
Sbjct  1142  THDATALAS  1150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            L PSSL
Sbjct  111  LPPSSL  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5761  DSGNESE  5781
             + GNES+
Sbjct  148   EAGNESD  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4650  KSLVKH  4667
             K L+KH
Sbjct  367   KNLIKH  372


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7890  ELGRDIH  7910
             EL RD H
Sbjct  416   ELDRDRH  422


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  1886  DTVLEEMSLPGR  1921
             DT LEE    GR
Sbjct  539   DTQLEE----GR  546


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7627  GTDLESH  7647
             G D ESH
Sbjct  642   GSDQESH  648


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1860  SFSCP  1846
             S+SCP
Sbjct  829   SYSCP  833


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2292  FFFMAN  2275
             F+FM N
Sbjct  887   FYFMKN  892


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1982  SDHTVL  1965
             S+HTV+
Sbjct  1172  SNHTVM  1177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3364  EIMVPVR  3384
             EI +P R
Sbjct  44    EIIIPLR  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  4351  PNPPFSFKIVDEY  4313
             P PP S K  DE+
Sbjct  55    PEPPNSSKTGDEF  67


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7127  LLTRDG  7144
             L+TR+G
Sbjct  393   LMTREG  398


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6857  QSSGGDPE  6880
             QS G D E
Sbjct  639   QSAGSDQE  646


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7728  KKRMN  7742
             KK MN
Sbjct  724   KKQMN  728


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6004  VCGYT  5990
             VC YT
Sbjct  970   VCDYT  974


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3147  QENMQ  3161
             QE MQ
Sbjct  1225  QEAMQ  1229


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2952  VPLRSL  2935
             +PLR L
Sbjct  47    IPLRPL  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5307  SSCCR  5293
             S CCR
Sbjct  119   SKCCR  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3123  KSHLKI  3140
             K HLK+
Sbjct  338   KGHLKV  343


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7274  KRRVVQ  7291
             KR V+Q
Sbjct  786   KRHVIQ  791


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3229  KHSN  3240
             KHSN
Sbjct  792   KHSN  795


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2023  YCTYSFM  2003
             YC + FM
Sbjct  884   YCDFYFM  890


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3176  HTNDVKQ  3196
             HT D KQ
Sbjct  959   HTADGKQ  965


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3226  RKHSN  3240
             RKH N
Sbjct  1015  RKHPN  1019


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +3

Query  4278  RL-----NILRQ  4298
             RL     NIL Q
Sbjct  1123  RLDPTAVNILQQ  1134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQ  QE
Sbjct  1237  EQPAQE  1242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3371  IISLR  3357
             II LR
Sbjct  46    IIPLR  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  184  APEQG  198
            APE+G
Sbjct  104  APEEG  108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6042  KILTC  6056
             KI TC
Sbjct  269   KIFTC  273


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3160  KNEGCP  3177
             K E CP
Sbjct  532   KEEACP  537


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6326  NDTTS  6340
             NDT S
Sbjct  601   NDTSS  605


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1027  QGEV  1038
             QGEV
Sbjct  627   QGEV  630


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  632  SFRQDR  649
            SF +DR
Sbjct  838  SFSEDR  843


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1757  EAGADRQGT  1783
             EA  D QGT
Sbjct  1096  EAEEDVQGT  1104


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4984  VNIKQDI  5004
             VNI Q I
Sbjct  1129  VNILQQI  1135


>ref|NP_036595.2|  V-type proton ATPase 116 kDa subunit a isoform 2 [Homo sapiens]
Length=856

 GENE ID: 23545 ATP6V0A2 | ATPase, H+ transporting, lysosomal V0 subunit a2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect(2) = 5.8
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = -2

Query  1158  LLF------YLIPGLSIFYKFL  1111
             LLF      YLI    IFYK L
Sbjct  591   LLFMLCIFGYLI--FMIFYKWL  610


 Score = 22.3 bits (45),  Expect(2) = 5.8
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 7/24 (29%)
 Frame = -1

Query  1063  RVL-VVPAMSLP---LGS---LIW  1013
             RVL VV A+S P   LG    L W
Sbjct  650   RVLLVVTALSVPVLFLGKPLFLLW  673


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  5266  PSIPISFIDM  5237
             PSI I FI+M
Sbjct  621   PSILIEFINM  630


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2315  LVDFRELN  2338
             LV FR+LN
Sbjct  34    LVQFRDLN  41


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4674  TYGVLL  4657
             TYGVLL
Sbjct  784   TYGVLL  789


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = +1

Query  5458  KK-C-CFHCQV  5484
             KK C C+HC+V
Sbjct  239   KKICDCYHCHV  249


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5291  FLLWL  5277
             FLLWL
Sbjct  670   FLLWL  674


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 14/26 (53%)
 Frame = +2

Query  7847  VGLRI--------------VFAVLSI  7882
             VGLR+               FAVL I
Sbjct  777   VGLRVDTTYGVLLLLPVIALFAVLTI  802


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = -3

Query  4859  FPPFYGDSLTQMPVSFSCMQ  4800
             FP    DSL      +SCMQ
Sbjct  152   FPSLESDSL----LDYSCMQ  167


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  6792  VLFHFALLM  6766
             V+F FALL+
Sbjct  420   VMFLFALLL  428


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -3

Query  5108  PSILCQFRNTRQRWLYLF  5055
             PSIL +F N     ++LF
Sbjct  621   PSILIEFIN-----MFLF  633


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/17 (35%), Positives = 7/17 (41%), Gaps = 9/17 (52%)
 Frame = -1

Query  6073  YHVIFPHVKIFCHIYQY  6023
             YH         CH+Y Y
Sbjct  245   YH---------CHVYPY  252


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4512  SPFQRSFAG  4486
             S FQR F G
Sbjct  45    SSFQRKFVG  53


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8321  LERIL  8335
             LERIL
Sbjct  61    LERIL  65


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = -1

Query  7453  RLNSPQQI---------VLLL  7418
             RLN  Q+I         +LLL
Sbjct  436   RLNQSQEIMRMFFNGRYILLL  456


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -2

Query  3468  TYPAFPNLV--SLL  3433
             TY  FP L   SLL
Sbjct  148   TYEEFPSLESDSLL  161


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  2327  RE----LNKRTQD  2353
             RE    LN R QD
Sbjct  260   REIQEGLNTRIQD  272


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2586  MLLWN  2572
             M LWN
Sbjct  501   MVLWN  505


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = +2

Query  5525  RSG------DSDEE  5548
             RSG      DS+EE
Sbjct  685   RSGYTLIRKDSEEE  698


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6763  TMCLSH  6746
             TMCL +
Sbjct  9     TMCLAQ  14


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  4185  RNLEF-PT  4205
             RN EF PT
Sbjct  141   RNVEFEPT  148


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -1

Query  6703  SLDTDS---FSC  6677
             SL+ DS   +SC
Sbjct  154   SLESDSLLDYSC  165


 Score = 17.6 bits (34),  Expect(2) = 14297
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4676  IHMVF  4662
             IHM F
Sbjct  561   IHMTF  565


 Score = 15.1 bits (28),  Expect(2) = 14297
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4674  TYGVLL  4657
             T+GV L
Sbjct  564   TFGVIL  569


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/25 (32%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = -1

Query  6643  RCVQL-----YYYGFSIVREIDRSN  6584
             RC +L     Y      V EI+R +
Sbjct  57    RCEELERILVY-----LVQEINRAD  76


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6026  ILLLVG  6009
             ILLL G
Sbjct  453   ILLLMG  458


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4676  IHMVFY  4659
             I M+FY
Sbjct  602   IFMIFY  607


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
 Frame = +1

Query  5773  ESEGEISALVEMGVEMGHHAPWDVDD  5850
             +SE E+S L    +E G H    V+D
Sbjct  694   DSEEEVSLLGSQDIEEGNH---QVED  716


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8057  LCLFSY  8074
             LC F Y
Sbjct  595   LCIFGY  600


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1807  DLREV  1793
             +LREV
Sbjct  107   ELREV  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  879  QDLNTML  899
            QDL T L
Sbjct  271  QDLYTVL  277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4597  LFSII  4583
             LF II
Sbjct  398   LFTII  402


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7906  FTII  7917
             FTII
Sbjct  399   FTII  402


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  216  FPFAFRSLFG  187
            FPF F  +FG
Sbjct  404  FPFLFAVMFG  413


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4791  MLLLPI  4774
             +LLLP+
Sbjct  788   LLLLPV  793


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  6270  PLMLVLILKEQ  6238
             PL  VL + EQ
Sbjct  90    PLKQVLEMQEQ  100


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4327  IVDEY  4313
             IVD Y
Sbjct  382   IVDAY  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8529  EEEV  8540
             EEEV
Sbjct  696   EEEV  699


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2314  ISRFQR  2331
             +S FQR
Sbjct  44    VSSFQR  49


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7678  QLHKL  7692
             QL+KL
Sbjct  100   QLQKL  104


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2702  EELRQHLL  2725
             E LR  LL
Sbjct  116   EKLRKNLL  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -2

Query  5799  KC*YFSFTLIATVFC  5755
             KC      LIA V C
Sbjct  322   KC------LIAEVWC  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2530  LISNPWC  2510
             LI   WC
Sbjct  324   LIAEVWC  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +3

Query  450  RELERFAVNPGL  485
            RE     VNP L
Sbjct  392  RE-----VNPAL  398


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1296  LLVQNAN  1316
             LLV N N
Sbjct  427   LLVLNEN  433


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7682  YTSLI  7696
             YT LI
Sbjct  463   YTGLI  467


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3583  NRLT  3594
             NRLT
Sbjct  542   NRLT  545


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5244  MKLMGILG  5267
             MK+  ILG
Sbjct  552   MKMSVILG  559


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7008  VSLPSVLF  6985
             VS P  LF
Sbjct  586   VSIPELLF  593


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8093  LLIVT  8107
             LL+VT
Sbjct  652   LLVVT  656


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8799  IEEAN  8813
             IEE N
Sbjct  707   IEEGN  711


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4191  NSCLI  4177
             N CLI
Sbjct  321   NKCLI  325


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7278  EEWCRE  7295
             E WC E
Sbjct  327   EVWCPE  332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  734  YSAEHP  751
            YS  HP
Sbjct  489  YSSSHP  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4383  MSTIL  4369
             MS IL
Sbjct  554   MSVIL  558


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9074  KSSCLYAGSE  9045
             K S LY G E
Sbjct  637   KTSGLYTGQE  646


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8835  LHPVSLH  8855
             LH + LH
Sbjct  815   LHAIRLH  821


>pdb|3MLY|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex 
With A Ur29 V3 Peptide
 pdb|3MLY|M  Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex 
With A Ur29 V3 Peptide
 pdb|3MLZ|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex 
With A Vi191 V3 Peptide
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 10/13 (76%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +3

Query  1725  RSGVETTTPPQKQ  1763
             R GVETTTP  KQ
Sbjct  159   RAGVETTTPS-KQ  170


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.5 bits (36),  Expect(2) =  6986
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4216  TLGIVG  4199
             TLGI+G
Sbjct  73    TLGIIG  78


 Score = 16.8 bits (32),  Expect(2) =  6986
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  106   LTVLSQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  156

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  157   PVRAGV  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  194   YSCQVTH  200


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  192   RSYSCQ  197


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  5573  KLL-YQSSK  5596
             KLL Y+ SK
Sbjct  46    KLLIYENSK  54


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  123  PS----SEELQA--NK-ATLVC  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1797  SLRSLFG  1817
             SLR  FG
Sbjct  95    SLRTVFG  101


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5422  SQPKTA  5439
             SQPK A
Sbjct  110   SQPKAA  115


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  180  SGARTGT  200
            SG R GT
Sbjct  64   SGSRSGT  70


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +2

Query  7853  LRIVF------AVLS  7879
             LR VF       VLS
Sbjct  96    LRTVFGGGTKLTVLS  110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  115   APSVTL  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  41   PGTAPKLL  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4797  GLHTGE  4814
             GL+TG+
Sbjct  78    GLQTGD  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  116   PSVTLF  121


>pdb|3MLX|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex 
With An Mn V3 Peptide
 pdb|3MLX|M  Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 3074 In Complex 
With An Mn V3 Peptide
Length=211


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 10/13 (76%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +3

Query  1725  RSGVETTTPPQKQ  1763
             R GVETTTP  KQ
Sbjct  158   RAGVETTTPS-KQ  169


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  5     QPPSVS-----AAPG  14


 Score = 18.5 bits (36),  Expect(2) =  7021
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4216  TLGIVG  4199
             TLGI+G
Sbjct  72    TLGIIG  77


 Score = 16.8 bits (32),  Expect(2) =  7021
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  105   LTVLSQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  155

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  156   PVRAGV  161


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  193   YSCQVTH  199


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  191   RSYSCQ  196


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  5573  KLL-YQSSK  5596
             KLL Y+ SK
Sbjct  45    KLLIYENSK  53


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  122  PS----SEELQA--NK-ATLVC  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1797  SLRSLFG  1817
             SLR  FG
Sbjct  94    SLRTVFG  100


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5422  SQPKTA  5439
             SQPK A
Sbjct  109   SQPKAA  114


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  180  SGARTGT  200
            SG R GT
Sbjct  63   SGSRSGT  69


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +2

Query  7853  LRIVF------AVLS  7879
             LR VF       VLS
Sbjct  95    LRTVFGGGTKLTVLS  109


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  114   APSVTL  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  40   PGTAPKLL  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4797  GLHTGE  4814
             GL+TG+
Sbjct  77    GLQTGD  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  115   PSVTLF  120


>pdb|2I07|B  Chain B, Human Complement Component C3b
Length=915


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 13/37 (35%)
 Frame = +2

Query  2663  GSD-LEIGQHRT-----------KIEELRQHLLRWGL  2737
             GSD  ++GQ+RT           K EE   H L WGL
Sbjct  824   GSDEVQVGQQRTFISPIKCREALKLEE-KKHYLMWGL  859


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +1

Query  4198  SLQSPKSRSSRI  4233
             SLQ P SRSS I
Sbjct  549   SLQLP-SRSSKI  559


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  233   LLQ----GTPVAQM  242


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  149   PYVIVP  154


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  1981  LIILSYFDKTSNS  1943
             LII  Y DK S S
Sbjct  696   LII--YLDKVSHS  706


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  41    KLMNIFL  47


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1911  CQEDGNQK  1934
             CQ++ NQK
Sbjct  889   CQDEENQK  896


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  7528  VSFHSQDSCL  7499
             VS HS+D CL
Sbjct  703   VS-HSEDDCL  711


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  1     SNLDEDI---IAEEN  12


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  25    WNVEDL  30


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3179  TNDVKQLTEAV  3211
             T+D KQL   V
Sbjct  667   TDDLKQLANGV  677


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  78    MQDFFIDL  85


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1176  SILDI  1190
             SILDI
Sbjct  653   SILDI  657


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1686  SEENSLAF  1663
             SE++ LAF
Sbjct  706   SEDDCLAF  713


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  715  RSAKIT  732
            RS KIT
Sbjct  555  RSSKIT  560


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2520  LDISTM  2537
             LDIS M
Sbjct  655   LDISMM  660


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8059  VPLQLP  8076
             V LQLP
Sbjct  548   VSLQLP  553


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  179  KSLKVVPE  186


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  189   RMNK  192


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  192   KTVAVR  197


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  372   EDAPVIHQE  380


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1689  CSEEN  1675
             C EEN
Sbjct  765   CAEEN  769


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query  1359  TLEEMM-TACQ-GV  1394
             TLEE +  AC+ GV
Sbjct  780   TLEERLDKACEPGV  793


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  50    SITTWEI  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  95    EQVEIRAV  102


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  239   VAQMTED  245


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  5     EDII  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  19    FPESW  23


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  185   PEGIRMNKTVAVRTLD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  426   DFLEA  430


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  490   LALLQL  495


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  491   ALLQLK  496


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80   ALLRLK  63
            ALL LK
Sbjct  491  ALLQLK  496


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  5258  DTWAGVE  5278
             DTW  VE
Sbjct  877   DTW--VE  881


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  42    LMNIFL  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  68    CVADP  72


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  87   LPYS  90


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  429   EANYMN  434


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4706  IKPSP  4692
             IKP P
Sbjct  619   IKPAP  623


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9155  GLSSGF  9138
             GLSS F
Sbjct  858   GLSSDF  863


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  70   GLSSGF  53
            GLSS F
Sbjct  858  GLSSDF  863


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  57    LAVSMSDKKG  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  182   KVVPEGIR  189


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  252   LKHL  255


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  339   SLAVNLIAI  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQ L
Sbjct  527   VFQAL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4607  DDCVA  4621
             DDC A
Sbjct  708   DDCLA  712


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1961  KVRQY  1975
             KV QY
Sbjct  714   KVHQY  718


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3551  KLDKL  3537
             KL+KL
Sbjct  753   KLNKL  757


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7275  REEWCR  7292
             R+E CR
Sbjct  759   RDELCR  764


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372  LD---RWEK  389
            LD    WEK
Sbjct  280  LDETEQWEK  288


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  326   PSTWLT  331


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  387   NNNEKDMA  394


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  415   NSLPG  419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2005  MSTDFYEY  1982
             +S DF EY
Sbjct  806   LSNDFDEY  813


>pdb|2HR0|B  Chain B, Structure Of Complement C3b: Insights Into Complement 
Activation And Regulation
 pdb|2ICF|B  Chain B, Crig Bound To C3b
 pdb|3G6J|B  Chain B, C3b In Complex With A C3b Specific Fab
 7 more sequence titles
 pdb|3G6J|D  Chain D, C3b In Complex With A C3b Specific Fab
 pdb|2WII|B  Chain B, Complement C3b In Complex With Factor H Domains 1-4
 pdb|2WIN|B  Chain B, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|D  Chain D, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|F  Chain F, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|H  Chain H, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|3L5N|B  Chain B, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3b
Length=915


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 13/37 (35%)
 Frame = +2

Query  2663  GSD-LEIGQHRT-----------KIEELRQHLLRWGL  2737
             GSD  ++GQ+RT           K EE   H L WGL
Sbjct  824   GSDEVQVGQQRTFISPIKCREALKLEE-KKHYLMWGL  859


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +1

Query  4198  SLQSPKSRSSRI  4233
             SLQ P SRSS I
Sbjct  549   SLQLP-SRSSKI  559


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  233   LLQ----GTPVAQM  242


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  149   PYVIVP  154


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  1981  LIILSYFDKTSNS  1943
             LII  Y DK S S
Sbjct  696   LII--YLDKVSHS  706


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  41    KLMNIFL  47


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1911  CQEDGNQK  1934
             CQ++ NQK
Sbjct  889   CQDEENQK  896


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  7528  VSFHSQDSCL  7499
             VS HS+D CL
Sbjct  703   VS-HSEDDCL  711


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  1     SNLDEDI---IAEEN  12


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  25    WNVEDL  30


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3179  TNDVKQLTEAV  3211
             T+D KQL   V
Sbjct  667   TDDLKQLANGV  677


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  78    MQDFFIDL  85


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1176  SILDI  1190
             SILDI
Sbjct  653   SILDI  657


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1686  SEENSLAF  1663
             SE++ LAF
Sbjct  706   SEDDCLAF  713


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  715  RSAKIT  732
            RS KIT
Sbjct  555  RSSKIT  560


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2520  LDISTM  2537
             LDIS M
Sbjct  655   LDISMM  660


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8059  VPLQLP  8076
             V LQLP
Sbjct  548   VSLQLP  553


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  179  KSLKVVPE  186


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  189   RMNK  192


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  192   KTVAVR  197


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  372   EDAPVIHQE  380


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1689  CSEEN  1675
             C EEN
Sbjct  765   CAEEN  769


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query  1359  TLEEMM-TACQ-GV  1394
             TLEE +  AC+ GV
Sbjct  780   TLEERLDKACEPGV  793


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  50    SITTWEI  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  95    EQVEIRAV  102


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  239   VAQMTED  245


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  5     EDII  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  19    FPESW  23


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  185   PEGIRMNKTVAVRTLD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  426   DFLEA  430


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  490   LALLQL  495


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  491   ALLQLK  496


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80   ALLRLK  63
            ALL LK
Sbjct  491  ALLQLK  496


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  5258  DTWAGVE  5278
             DTW  VE
Sbjct  877   DTW--VE  881


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  42    LMNIFL  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  68    CVADP  72


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  87   LPYS  90


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  429   EANYMN  434


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4706  IKPSP  4692
             IKP P
Sbjct  619   IKPAP  623


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9155  GLSSGF  9138
             GLSS F
Sbjct  858   GLSSDF  863


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  70   GLSSGF  53
            GLSS F
Sbjct  858  GLSSDF  863


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  57    LAVSMSDKKG  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  182   KVVPEGIR  189


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  252   LKHL  255


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  339   SLAVNLIAI  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQ L
Sbjct  527   VFQAL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4607  DDCVA  4621
             DDC A
Sbjct  708   DDCLA  712


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1961  KVRQY  1975
             KV QY
Sbjct  714   KVHQY  718


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3551  KLDKL  3537
             KL+KL
Sbjct  753   KLNKL  757


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7275  REEWCR  7292
             R+E CR
Sbjct  759   RDELCR  764


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372  LD---RWEK  389
            LD    WEK
Sbjct  280  LDETEQWEK  288


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  326   PSTWLT  331


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  387   NNNEKDMA  394


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  415   NSLPG  419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2005  MSTDFYEY  1982
             +S DF EY
Sbjct  806   LSNDFDEY  813


>ref|NP_000055.2|  complement C3 precursor [Homo sapiens]
 sp|P01024.2|CO3_HUMAN  RecName: Full=Complement C3; AltName: Full=C3 and PZP-like alpha-2-macroglobulin 
domain-containing protein 1; Contains: RecName: 
Full=Complement C3 beta chain; Contains: RecName: Full=Complement 
C3 alpha chain; Contains: RecName: Full=C3a anaphylatoxin; 
Contains: RecName: Full=Complement C3b alpha' chain; 
Contains: RecName: Full=Complement C3c alpha' chain fragment 
1; Contains: RecName: Full=Complement C3dg fragment; 
Contains: RecName: Full=Complement C3g fragment; Contains: RecName: 
Full=Complement C3d fragment; Contains: RecName: Full=Complement 
C3f fragment; Contains: RecName: Full=Complement 
C3c alpha' chain fragment 2; Flags: Precursor
 gb|AAR89906.1|  complement component 3 [Homo sapiens]
 gb|EAW69071.1|  complement component 3, isoform CRA_b [Homo sapiens]
 gb|AAI50201.1|  Complement component 3 [Homo sapiens]
 gb|AAI50180.1|  Complement component 3 [Homo sapiens]
Length=1663

 GENE ID: 718 C3 | complement component 3 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 13/37 (35%)
 Frame = +2

Query  2663  GSD-LEIGQHRT-----------KIEELRQHLLRWGL  2737
             GSD  ++GQ+RT           K EE   H L WGL
Sbjct  1572  GSDEVQVGQQRTFISPIKCREALKLEE-KKHYLMWGL  1607


 Score = 21.4 bits (43),  Expect(2) =   446
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  442   QALPYST--VGNS  452


 Score = 18.0 bits (35),  Expect(2) =   446
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  446   YS------TVGNSNN  454


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +1

Query  4198  SLQSPKSRSSRI  4233
             SLQ P SRSS I
Sbjct  1297  SLQLP-SRSSKI  1307


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  981   LLQ----GTPVAQM  990


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  162   TVMVNI  167


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  897   PYVIVP  902


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  1981  LIILSYFDKTSNS  1943
             LII  Y DK S S
Sbjct  1444  LII--YLDKVSHS  1454


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  789   KLMNIFL  795


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1911  CQEDGNQK  1934
             CQ++ NQK
Sbjct  1637  CQDEENQK  1644


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  119   KVVLVSLQ--SGY  129


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  212   NSPQQV  217


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  7528  VSFHSQDSCL  7499
             VS HS+D CL
Sbjct  1451  VS-HSEDDCL  1459


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  749   SNLDEDI---IAEEN  760


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  773   WNVEDL  778


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3179  TNDVKQLTEAV  3211
             T+D KQL   V
Sbjct  1415  TDDLKQLANGV  1425


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2801  DGVHNP  2784
             DGV+NP
Sbjct  309   DGVQNP  314


 Score = 17.6 bits (34),  Expect(2) =  7666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  117  VEKVVLVSL  125


 Score = 15.9 bits (30),  Expect(2) =  7666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  91   PANRE  95


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  586   EGDHGARVVLVAV  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  826   MQDFFIDL  833


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1176  SILDI  1190
             SILDI
Sbjct  1401  SILDI  1405


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1686  SEENSLAF  1663
             SE++ LAF
Sbjct  1454  SEDDCLAF  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL H PL L S
Sbjct  13    LLTHLPLALGS  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  243   YYIYN  247


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  715   RSAKIT  732
             RS KIT
Sbjct  1303  RSSKIT  1308


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2520  LDISTM  2537
             LDIS M
Sbjct  1403  LDISMM  1408


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  194   DIPELVNMG  202


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  245   IY---NEKGLEVTI  255


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4987  SHLGL  4973
             SHLGL
Sbjct  742   SHLGL  746


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8059  VPLQLP  8076
             V LQLP
Sbjct  1296  VSLQLP  1301


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  927  KSLKVVPE  934


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  937   RMNK  940


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  940   KTVAVR  945


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  1120  EDAPVIHQE  1128


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1689  CSEEN  1675
             C EEN
Sbjct  1513  CAEEN  1517


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query  1359  TLEEMM-TACQ-GV  1394
             TLEE +  AC+ GV
Sbjct  1528  TLEERLDKACEPGV  1541


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  237   EPTEKFYY  244


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  282   ISLPES  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  353   YQIHFTKTPKY  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  369   PFDLMVFVTNP  379


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  456   LHLSVLRTELRP  467


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  798   SITTWEI  804


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  843   EQVEIRAV  850


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  987   VAQMTED  993


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  70    SSEKTVLTP  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  88    FTIP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  139   YTPGSTVLY  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  425   RTKKQEL  431


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  753   EDII  756


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  767   FPESW  771


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  933   PEGIRMNKTVAVRTLD  948


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  1174  DFLEA  1178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  1238  LALLQL  1243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80    ALLRLK  63
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  5258  DTWAGVE  5278
             DTW  VE
Sbjct  1625  DTW--VE  1629


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6041  LSHLP  6027
             L HLP
Sbjct  14    LTHLP  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  202  GQWKIRAY  209


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  489   YYTYLI  494


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  602   VFVLNKK--------------NKLTQSKIWDV  619


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  790   LMNIFL  795


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  816   CVADP  820


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  835  LPYS  838


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  1177  EANYMN  1182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4706  IKPSP  4692
             IKP P
Sbjct  1367  IKPAP  1371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9155  GLSSGF  9138
             GLSS F
Sbjct  1606  GLSSDF  1611


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  70    GLSSGF  53
             GLSS F
Sbjct  1606  GLSSDF  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  34    LRLESEETMVL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  74    TVLTPA  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  288   LKRIP  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  342   ERSGIP  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  347   PIVT  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  370   FDLMV  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  492   YLIM  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  517   LPLSI  521


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  528   SFRL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  805   LAVSMSDKKG  814


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  930   KVVPEGIR  937


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  1000  LKHL  1003


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  1087  SLAVNLIAI  1095


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQ L
Sbjct  1275  VFQAL  1279


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4607  DDCVA  4621
             DDC A
Sbjct  1456  DDCLA  1460


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1961  KVRQY  1975
             KV QY
Sbjct  1462  KVHQY  1466


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3551  KLDKL  3537
             KL+KL
Sbjct  1501  KLNKL  1505


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7275  REEWCR  7292
             R+E CR
Sbjct  1507  RDELCR  1512


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  233   EVI-VEPTEKF  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  280   QRISLPE  286


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  280   QRISL  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  222  RSSLD  236
            RS LD
Sbjct  748  RSNLD  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372   LD---RWEK  389
             LD    WEK
Sbjct  1028  LDETEQWEK  1036


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  1074  PSTWLT  1079


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  1135  NNNEKDMA  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  1163  NSLPG  1167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2005  MSTDFYEY  1982
             +S DF EY
Sbjct  1554  LSNDFDEY  1561


>pdb|2A73|B  Chain B, Human Complement Component C3
Length=991


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 13/37 (35%)
 Frame = +2

Query  2663  GSD-LEIGQHRT-----------KIEELRQHLLRWGL  2737
             GSD  ++GQ+RT           K EE   H L WGL
Sbjct  900   GSDEVQVGQQRTFISPIKCREALKLEE-KKHYLMWGL  935


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +1

Query  4198  SLQSPKSRSSRI  4233
             SLQ P SRSS I
Sbjct  625   SLQLP-SRSSKI  635


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  309   LLQ----GTPVAQM  318


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  225   PYVIVP  230


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  1981  LIILSYFDKTSNS  1943
             LII  Y DK S S
Sbjct  772   LII--YLDKVSHS  782


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  117   KLMNIFL  123


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1911  CQEDGNQK  1934
             CQ++ NQK
Sbjct  965   CQDEENQK  972


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  7528  VSFHSQDSCL  7499
             VS HS+D CL
Sbjct  779   VS-HSEDDCL  787


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  77    SNLDEDI---IAEEN  88


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  101   WNVEDL  106


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3179  TNDVKQLTEAV  3211
             T+D KQL   V
Sbjct  743   TDDLKQLANGV  753


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  154   MQDFFIDL  161


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1176  SILDI  1190
             SILDI
Sbjct  729   SILDI  733


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1686  SEENSLAF  1663
             SE++ LAF
Sbjct  782   SEDDCLAF  789


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  715  RSAKIT  732
            RS KIT
Sbjct  631  RSSKIT  636


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2520  LDISTM  2537
             LDIS M
Sbjct  731   LDISMM  736


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4987  SHLGL  4973
             SHLGL
Sbjct  70    SHLGL  74


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8059  VPLQLP  8076
             V LQLP
Sbjct  624   VSLQLP  629


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  255  KSLKVVPE  262


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  265   RMNK  268


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  268   KTVAVR  273


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  448   EDAPVIHQE  456


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1689  CSEEN  1675
             C EEN
Sbjct  841   CAEEN  845


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query  1359  TLEEMM-TACQ-GV  1394
             TLEE +  AC+ GV
Sbjct  856   TLEERLDKACEPGV  869


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  126   SITTWEI  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  171   EQVEIRAV  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  315   VAQMTED  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  81    EDII  84


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  95    FPESW  99


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  261   PEGIRMNKTVAVRTLD  276


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  502   DFLEA  506


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  566   LALLQL  571


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  567   ALLQLK  572


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80   ALLRLK  63
            ALL LK
Sbjct  567  ALLQLK  572


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  5258  DTWAGVE  5278
             DTW  VE
Sbjct  953   DTW--VE  957


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  118   LMNIFL  123


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  144   CVADP  148


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  163  LPYS  166


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  505   EANYMN  510


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4706  IKPSP  4692
             IKP P
Sbjct  695   IKPAP  699


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9155  GLSSGF  9138
             GLSS F
Sbjct  934   GLSSDF  939


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  70   GLSSGF  53
            GLSS F
Sbjct  934  GLSSDF  939


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  133   LAVSMSDKKG  142


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  258   KVVPEGIR  265


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  328   LKHL  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  415   SLAVNLIAI  423


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQ L
Sbjct  603   VFQAL  607


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4607  DDCVA  4621
             DDC A
Sbjct  784   DDCLA  788


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1961  KVRQY  1975
             KV QY
Sbjct  790   KVHQY  794


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3551  KLDKL  3537
             KL+KL
Sbjct  829   KLNKL  833


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7275  REEWCR  7292
             R+E CR
Sbjct  835   RDELCR  840


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  222  RSSLD  236
            RS LD
Sbjct  76   RSNLD  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372  LD---RWEK  389
            LD    WEK
Sbjct  356  LDETEQWEK  364


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  402   PSTWLT  407


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  463   NNNEKDMA  470


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  491   NSLPG  495


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2005  MSTDFYEY  1982
             +S DF EY
Sbjct  882   LSNDFDEY  889


>pdb|2A74|C  Chain C, Human Complement Component C3c
 pdb|2A74|F  Chain F, Human Complement Component C3c
 pdb|2ICE|C  Chain C, Crig Bound To C3c
 8 more sequence titles
 pdb|2ICE|F  Chain F, Crig Bound To C3c
 pdb|2QKI|C  Chain C, Human C3c In Complex With The Inhibitor Compstatin
 pdb|2QKI|F  Chain F, Human C3c In Complex With The Inhibitor Compstatin
 pdb|3L3O|F  Chain F, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
 pdb|3L3O|C  Chain C, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
 pdb|3NMS|C  Chain C, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement C3c
 pdb|3NSA|C  Chain C, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
 pdb|3NSA|F  Chain F, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
Length=343


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 13/37 (35%)
 Frame = +2

Query  2663  GSD-LEIGQHRT-----------KIEELRQHLLRWGL  2737
             GSD  ++GQ+RT           K EE   H L WGL
Sbjct  252   GSDEVQVGQQRTFISPIKCREALKLEE-KKHYLMWGL  287


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  1981  LIILSYFDKTSNS  1943
             LII  Y DK S S
Sbjct  124   LII--YLDKVSHS  134


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1911  CQEDGNQK  1934
             CQ++ NQK
Sbjct  317   CQDEENQK  324


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  7528  VSFHSQDSCL  7499
             VS HS+D CL
Sbjct  131   VS-HSEDDCL  139


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3179  TNDVKQLTEAV  3211
             T+D KQL   V
Sbjct  95    TDDLKQLANGV  105


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1176  SILDI  1190
             SILDI
Sbjct  81    SILDI  85


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1686  SEENSLAF  1663
             SE++ LAF
Sbjct  134   SEDDCLAF  141


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2520  LDISTM  2537
             LDIS M
Sbjct  83    LDISMM  88


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1689  CSEEN  1675
             C EEN
Sbjct  193   CAEEN  197


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query  1359  TLEEMM-TACQ-GV  1394
             TLEE +  AC+ GV
Sbjct  208   TLEERLDKACEPGV  221


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  5258  DTWAGVE  5278
             DTW  VE
Sbjct  305   DTW--VE  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4706  IKPSP  4692
             IKP P
Sbjct  47    IKPAP  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9155  GLSSGF  9138
             GLSS F
Sbjct  286   GLSSDF  291


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  70   GLSSGF  53
            GLSS F
Sbjct  286  GLSSDF  291


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4607  DDCVA  4621
             DDC A
Sbjct  136   DDCLA  140


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1961  KVRQY  1975
             KV QY
Sbjct  142   KVHQY  146


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3551  KLDKL  3537
             KL+KL
Sbjct  181   KLNKL  185


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7275  REEWCR  7292
             R+E CR
Sbjct  187   RDELCR  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2005  MSTDFYEY  1982
             +S DF EY
Sbjct  234   LSNDFDEY  241


>ref|NP_006065.2|  E3 ubiquitin-protein ligase TRIM22 [Homo sapiens]
Length=498

 GENE ID: 10346 TRIM22 | tripartite motif-containing 22 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = -1

Query  2926  PYFNPW---VNLT-CP  2891
             PYFNPW   V +T CP
Sbjct  480   PYFNPWNCLVPMTVCP  495


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7500  WSCLMPQTV  7474
             W CL P TV
Sbjct  485   WNCLVPMTV  493


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 3/17 (17%)
 Frame = +1

Query  8056  PVPLQLPPL-ERLTLDC  8103
             P+ L+L  L E L LDC
Sbjct  16    PICLEL--LTEPLSLDC  30


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3762  SGKYY  3776
             SGKYY
Sbjct  352   SGKYY  356


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3948  GLQSTC  3931
             GLQ TC
Sbjct  411   GLQNTC  416


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3436  VSCPIYIE  3413
             V CPI  E
Sbjct  13    VTCPICLE  20


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3956  IFLDY  3942
             +FLDY
Sbjct  445   VFLDY  449


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2393  LKKKKSV  2413
             LKK KSV
Sbjct  264   LKKPKSV  270


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4801  RPQY  4790
             RPQY
Sbjct  402   RPQY  405


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7787  FNITN  7801
             FN+TN
Sbjct  457   FNVTN  461


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  429  LIYIFS  412
            LIY FS
Sbjct  465  LIYKFS  470


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8473  QVAIQQL  8493
             QVA Q L
Sbjct  145   QVALQRL  151


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  344  ESVSIKRG  367
            ESV I RG
Sbjct  45   ESVIISRG  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  8950  KYSGCS-SR  8927
             K+SGC  SR
Sbjct  468   KFSGCRFSR  476


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3292  NMVDRV  3309
             N V+RV
Sbjct  76    NIVERV  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4983  CEYQA  4997
             CEY A
Sbjct  416   CEYNA  420


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4134  LLPLSVC  4114
             L P+ VC
Sbjct  488   LVPMTVC  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2119  TSKIK  2133
             T KIK
Sbjct  40    TAKIK  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7880  IVNRVRQ  7900
             IV RV +
Sbjct  77    IVERVKE  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  332  RDGCE  346
            RD CE
Sbjct  94   RDVCE  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1911  CQEDG  1925
             C EDG
Sbjct  108   CKEDG  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  6211  DNGERRD-KKL  6240
             DN E R+  KL
Sbjct  195   DNEEQRELQKL  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3916  RSHAWT  3933
             RS  WT
Sbjct  258   RSESWT  263


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6071  PCHFS  6057
             PC FS
Sbjct  336   PCDFS  340


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 8/16 (50%)
 Frame = +1

Query  7330  WVLG-----SS---RK  7353
             W+LG     SS   RK
Sbjct  367   WILGVHSKISSLNKRK  382


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4413  NSLVCMSV  4390
             N LV M V
Sbjct  486   NCLVPMTV  493


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  2019  VPIALCP  1999
             VP   CP
Sbjct  489   VPMTVCP  495


>gb|AAA85332.1|  complement component C3 [Homo sapiens]
Length=1663

 GENE ID: 718 C3 | complement component 3 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 13/37 (35%)
 Frame = +2

Query  2663  GSD-LEIGQHRT-----------KIEELRQHLLRWGL  2737
             GSD  ++GQ+RT           K EE   H L WGL
Sbjct  1572  GSDEVQVGQQRTFISPIKCREALKLEE-KKHYLMWGL  1607


 Score = 21.4 bits (43),  Expect(2) =   446
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  442   QALPYST--VGNS  452


 Score = 18.0 bits (35),  Expect(2) =   446
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  446   YS------TVGNSNN  454


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +1

Query  4198  SLQSPKSRSSRI  4233
             SLQ P SRSS I
Sbjct  1297  SLQLP-SRSSKI  1307


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  981   LLQ----GTPVAQM  990


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  162   TVMVNI  167


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  897   PYVIVP  902


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  1981  LIILSYFDKTSNS  1943
             LII  Y DK S S
Sbjct  1444  LII--YLDKVSHS  1454


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  789   KLMNIFL  795


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1911  CQEDGNQK  1934
             CQ++ NQK
Sbjct  1637  CQDEENQK  1644


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  119   KVVLVSLQ--SGY  129


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  212   NSPQQV  217


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  7528  VSFHSQDSCL  7499
             VS HS+D CL
Sbjct  1451  VS-HSEDDCL  1459


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  749   SNLDEDI---IAEEN  760


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  773   WNVEDL  778


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3179  TNDVKQLTEAV  3211
             T+D KQL   V
Sbjct  1415  TDDLKQLANGV  1425


 Score = 17.6 bits (34),  Expect(2) =  7666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  117  VEKVVLVSL  125


 Score = 15.9 bits (30),  Expect(2) =  7666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  91   PANRE  95


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  586   EGDHGARVVLVAV  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  826   MQDFFIDL  833


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1176  SILDI  1190
             SILDI
Sbjct  1401  SILDI  1405


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1686  SEENSLAF  1663
             SE++ LAF
Sbjct  1454  SEDDCLAF  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL H PL L S
Sbjct  13    LLTHLPLALGS  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  243   YYIYN  247


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  715   RSAKIT  732
             RS KIT
Sbjct  1303  RSSKIT  1308


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2520  LDISTM  2537
             LDIS M
Sbjct  1403  LDISMM  1408


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  194   DIPELVNMG  202


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  245   IY---NEKGLEVTI  255


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4987  SHLGL  4973
             SHLGL
Sbjct  742   SHLGL  746


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8059  VPLQLP  8076
             V LQLP
Sbjct  1296  VSLQLP  1301


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  927  KSLKVVPE  934


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  937   RMNK  940


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  940   KTVAVR  945


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  1120  EDAPVIHQE  1128


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1689  CSEEN  1675
             C EEN
Sbjct  1513  CAEEN  1517


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +3

Query  1359  TLEEMM-TACQ-GV  1394
             TLEE +  AC+ GV
Sbjct  1528  TLEERLDKACEPGV  1541


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  237   EPTEKFYY  244


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  282   ISLPES  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  353   YQIHFTKTPKY  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  369   PFDLMVFVTNP  379


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  456   LHLSVLRTELRP  467


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  798   SITTWEI  804


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  843   EQVEIRAV  850


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  987   VAQMTED  993


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  70    SSEKTVLTP  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  88    FTIP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  139   YTPGSTVLY  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  425   RTKKQEL  431


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  753   EDII  756


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  767   FPESW  771


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  933   PEGIRMNKTVAVRTLD  948


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  1174  DFLEA  1178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  1238  LALLQL  1243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80    ALLRLK  63
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  5258  DTWAGVE  5278
             DTW  VE
Sbjct  1625  DTW--VE  1629


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6041  LSHLP  6027
             L HLP
Sbjct  14    LTHLP  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  202  GQWKIRAY  209


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  489   YYTYLI  494


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  602   VFVLNKK--------------NKLTQSKIWDV  619


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  790   LMNIFL  795


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  816   CVADP  820


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  835  LPYS  838


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  1177  EANYMN  1182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4706  IKPSP  4692
             IKP P
Sbjct  1367  IKPAP  1371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9155  GLSSGF  9138
             GLSS F
Sbjct  1606  GLSSDF  1611


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  70    GLSSGF  53
             GLSS F
Sbjct  1606  GLSSDF  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  34    LRLESEETMVL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  74    TVLTPA  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  288   LKRIP  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  342   ERSGIP  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  347   PIVT  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  370   FDLMV  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  492   YLIM  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  517   LPLSI  521


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  528   SFRL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  805   LAVSMSDKKG  814


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  930   KVVPEGIR  937


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  1000  LKHL  1003


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  1087  SLAVNLIAI  1095


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQ L
Sbjct  1275  VFQAL  1279


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4607  DDCVA  4621
             DDC A
Sbjct  1456  DDCLA  1460


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1961  KVRQY  1975
             KV QY
Sbjct  1462  KVHQY  1466


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3551  KLDKL  3537
             KL+KL
Sbjct  1501  KLNKL  1505


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7275  REEWCR  7292
             R+E CR
Sbjct  1507  RDELCR  1512


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  233   EVI-VEPTEKF  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  280   QRISLPE  286


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  280   QRISL  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  314   LRAE  317


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  222  RSSLD  236
            RS LD
Sbjct  748  RSNLD  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372   LD---RWEK  389
             LD    WEK
Sbjct  1028  LDETEQWEK  1036


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  1074  PSTWLT  1079


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  1135  NNNEKDMA  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  1163  NSLPG  1167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2005  MSTDFYEY  1982
             +S DF EY
Sbjct  1554  LSNDFDEY  1561


>pdb|1F6A|A  Chain A, Structure Of The Human Ige-Fc Bound To Its High Affinity 
Receptor Fc(Epsilon)ri(Alpha)
Length=176


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 29.1 bits (61),  Expect = 6.6
 Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 21/45 (46%)
 Frame = +2

Query  8126  GRRGW-----------EALKYWWNLLQYWSQELKNSAVSLLNATA  8227
             G R W           EALKYW     Y   E  N A+S  NA A
Sbjct  109   GWRNWDVYKVIYYKDGEALKYW-----Y---E--NHAISITNAAA  143


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6487  YKCQH  6501
             YKCQH
Sbjct  66    YKCQH  70


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6554  NGSLAEE  6574
             NGSL EE
Sbjct  42    NGSLSEE  48


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8759  WMVLQAS  8779
             W+ LQAS
Sbjct  87    WLLLQAS  93


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4713  DVYKTI  4696
             DVYK I
Sbjct  114   DVYKVI  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7917  DNGEYPC  7897
             D GEY C
Sbjct  62    DSGEYKC  68


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -2

Query  3378  WYHNFTKGGVL---TNS  3337
             W+HN    G L   TNS
Sbjct  39    WFHN----GSLSEETNS  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2035  YTCQH  2049
             Y CQH
Sbjct  66    YKCQH  70


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4614  VWQVD  4628
             VWQ D
Sbjct  155   VWQLD  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3427  PIYIEGF  3407
             P+Y E F
Sbjct  78    PVYLEVF  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3759  ESGKYY  3776
             +SG YY
Sbjct  145   DSGTYY  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             V LTC
Sbjct  22    VTLTC  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4170  HQQAA  4156
             HQQ A
Sbjct  70    HQQVA  74


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1663  EGQGIFFR  1686
             EGQ  F R
Sbjct  99    EGQPLFLR  106


>ref|NP_001140177.1|  lysine-specific demethylase 5D isoform 1 [Homo sapiens]
Length=1570

 GENE ID: 8284 KDM5D | lysine (K)-specific demethylase 5D [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
 Frame = +2

Query  2615  QNPDIVIYQY--MDDLY----VGSDLEIGQHRTKIEELRQ  2716
             QN D    +Y  +DDL     VG DL +G      EELRQ
Sbjct  1058  QNGD----HYPCLDDLEGLVAVGRDLPVG-----LEELRQ  1088


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 11/22 (50%)
 Frame = -1

Query  6757  CLSHISYFSYCN---KCSPWSS  6701
             CLSHI      N   KCS  SS
Sbjct  751   CLSHI------NDLCKCS--SS  764


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  2354  FWEVQ---LGIP  2380
             FWE+Q   L IP
Sbjct  92    FWEIQGSSLKIP  103


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8948  LQELLT  8965
             LQELLT
Sbjct  991   LQELLT  996


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  7914  NGE-YPCL  7894
             NG+ YPCL
Sbjct  1059  NGDHYPCL  1066


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LL+RG+Q
Sbjct  922   LLERGQQ  928


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  991   MQGLL  1005
             MQGLL
Sbjct  968   MQGLL  972


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2705  ELRQHL  2722
             ELRQ+L
Sbjct  1328  ELRQQL  1333


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  1680  LQSRPEPTAPPEE  1718
             LQ  PEPT   EE
Sbjct  216   LQPDPEPT---EE  225


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4482  KDQQSSSGKV  4511
             KD+QS  G V
Sbjct  272   KDEQSGGGNV  281


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQA QE
Sbjct  376   EQATQE  381


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  552  EELRSL  569
            EELR L
Sbjct  813  EELRAL  818


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5276  EAIIR  5290
             EAIIR
Sbjct  1021  EAIIR  1025


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -2

Query  5007  CYVLLDIHT*G*LC  4966
             CY LL++     LC
Sbjct  1113  CYTLLEV-----LC  1121


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7715  ILQLR  7701
             ILQLR
Sbjct  1179  ILQLR  1183


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  409   PPGLNRI  389
             PP L+RI
Sbjct  1443  PPDLDRI  1449


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8027  RIRSLIE  8007
             RIR L E
Sbjct  1448  RIRTLLE  1454


 Score = 17.2 bits (33),  Expect(2) =  6541
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2288  SLWQILE  2268
             S WQ L+
Sbjct  1433  SIWQLLQ  1439


 Score = 16.8 bits (32),  Expect(2) =  6541
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2356  EVLSSL  2339
             E LSSL
Sbjct  1390  ELLSSL  1395


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  5991  QACVAQTL  5968
             +AC+AQ L
Sbjct  844   EACIAQVL  851


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -1

Query  1540  AVCPSL-P--QL  1514
             A CPSL P  QL
Sbjct  1551  AACPSLMPLLQL  1562


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5165  ELLEELKN  5188
             ELL+ LKN
Sbjct  831   ELLQRLKN  838


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7681  LHKLNTLLN  7707
             LH L TL+N
Sbjct  585   LHQLVTLMN  593


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4947  RKALL  4961
             RKALL
Sbjct  702   RKALL  706


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  8136  PL-----RPRSSTIL  8107
             PL     RPR  TIL
Sbjct  1263  PLCMRSRRPRLETIL  1277


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2663  GSDLE  2677
             GSDLE
Sbjct  1386  GSDLE  1390


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  447   SRELER  464
             SR LER
Sbjct  1467  SRALER  1472


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4201  LQSPKSRSS  4227
             LQS   RSS
Sbjct  1493  LQSKRARSS  1501


 Score = 15.9 bits (30),  Expect(2) = 15761
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  443  PYYMF  429
            PY MF
Sbjct  163  PYEMF  167


 Score = 15.9 bits (30),  Expect(2) = 15761
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  311  SKFLAYS  291
            SKF  YS
Sbjct  204  SKFSSYS  210


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1350  PAATLE  1367
             P ATLE
Sbjct  1016  PPATLE  1021


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  105   TLLEAL  88
             TLLE L
Sbjct  1115  TLLEVL  1120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4317  SSTILKE  4337
             SST LK+
Sbjct  282   SSTLLKQ  288


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7560  PQIPR  7546
             P+IPR
Sbjct  349   PEIPR  353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3062  LMGHNTL  3042
             LM  NTL
Sbjct  591   LMNPNTL  597


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -2

Query  4422  CF-C-NSLVCMS  4393
             C+ C + LVC+S
Sbjct  742   CYDCPDGLVCLS  753


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6421  LCPGWF  6438
             LC  WF
Sbjct  1222  LCQDWF  1227


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8476  VAIQQLP  8496
             VA Q LP
Sbjct  1281  VALQRLP  1287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  972   PILQLP  955
             P+L+LP
Sbjct  1402  PVLELP  1407


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  2865  MSLTVQLSFS  2836
             M L  QLS+S
Sbjct  1557  MPL-LQLSYS  1565


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  940  KRPSMRKLQ  966
            K P + KLQ
Sbjct  229  KHPELKKLQ  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4394  DIQTKE  4411
             DI+ KE
Sbjct  433   DIHSKE  438


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  202  ESERE  216
            E ERE
Sbjct  712  EAERE  716


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8527  RRRR  8538
             RRRR
Sbjct  1472  RRRR  1475


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3713  CVLVPMPDRP  3684
             C L P+P+ P
Sbjct  343   CLLPPLPEIP  352


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1310  ILDQQGFCH  1284
             +LDQ   CH
Sbjct  502   VLDQSVLCH  510


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7623  DLLLQL  7606
             DLL QL
Sbjct  583   DLLHQL  588


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +3

Query  8193  RIVL-----LACSMPQ  8225
             R+ L     L C M Q
Sbjct  872   RVLLEQMGSLPCAMHQ  887


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1416  RVLAEAM  1436
             RVL E M
Sbjct  872   RVLLEQM  878


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  214  ETRGALST  237
            E R AL T
Sbjct  904  EAREALAT  911


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5283  MASTP  5269
             MAS P
Sbjct  1198  MASSP  1202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7015  GDCVTS  6998
             GD VTS
Sbjct  1372  GDSVTS  1377


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1352  SGYTRR  1369
             S Y RR
Sbjct  207   SSYSRR  212


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  605  KDRDK  619
            KD DK
Sbjct  253  KDKDK  257


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7681  LHKL  7692
             LHKL
Sbjct  781   LHKL  784


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  2230  ENFKNWA  2250
             E F  WA
Sbjct  789   ESFDTWA  795


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7598  KAQQW  7584
             KAQ W
Sbjct  1046  KAQAW  1050


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8631  LEGLI  8645
             LEGL+
Sbjct  1069  LEGLV  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1944  ELEVL  1958
             EL+VL
Sbjct  1090  ELQVL  1094


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8984  SLVASS  8967
             SL ASS
Sbjct  1196  SLMASS  1201


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  4818  DW-HLGQGVSI  4847
             DW H GQ VS+
Sbjct  1225  DWFH-GQCVSV  1234


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  294   LTSRRPS  274
             LTS  PS
Sbjct  1238  LTSPKPS  1244


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  641   QDRGR  655
             QDR R
Sbjct  1307  QDRAR  1311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             +AQ RV
Sbjct  76    EAQTRV  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8802  LSYLAQ  8785
             L YL Q
Sbjct  83    LNYLDQ  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8715  QNYTPGP  8735
             Q Y PGP
Sbjct  237   QIYGPGP  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2106  GLMGK  2092
             GLM K
Sbjct  249   GLMAK  253


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5876  VTVYYG  5893
             VTV YG
Sbjct  426   VTVEYG  431


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6484  WSCSI  6470
             WS SI
Sbjct  540   WSYSI  544


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2362  FPEVL  2348
             FPE L
Sbjct  675   FPETL  679


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7171  DLGLIVAI  7148
             DL L VA+
Sbjct  680   DLNLAVAV  687


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6041  ENFNMWKN  6064
             E F+ W N
Sbjct  789   ESFDTWAN  796


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1576  GNVERKDT  1599
             G V R DT
Sbjct  856   GQVARMDT  863


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7878  ESTAKTILK  7852
             E   KT LK
Sbjct  1101  EKASKTFLK  1109


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7493  QLQA  7504
             QLQA
Sbjct  1332  QLQA  1335


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  7165  RDLQTWRRR  7191
             R L+  RRR
Sbjct  1468  RALERRRRR  1476


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  972   PILQL  958
             P LQL
Sbjct  1558  PLLQL  1562


>ref|NP_006717.2|  lipopolysaccharide-responsive and beige-like anchor protein [Homo 
sapiens]
 sp|P50851.4|LRBA_HUMAN  RecName: Full=Lipopolysaccharide-responsive and beige-like anchor 
protein; AltName: Full=CDC4-like protein; AltName: Full=Beige-like 
protein
Length=2863

 GENE ID: 987 LRBA | LPS-responsive vesicle trafficking, beach and anchor
containing [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 8/8 (100%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +1

Query  1924  ETKNDRGN  1947
             ETKNDRGN
Sbjct  1653  ETKNDRGN  1660


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query  8675  IKDILSSLGVN  8643
             +KDIL SL VN
Sbjct  1678  VKDILRSL-VN  1687


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  5943  LKHMIQRYIMFGP  5981
             LKHM Q Y   GP
Sbjct  194   LKHMPQKY---GP  203


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5302  TAVYPFSE  5325
             TAVY FSE
Sbjct  362   TAVYLFSE  369


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 5/21 (23%)
 Frame = +2

Query  3524  TELQAI----YLALQDSGLEV  3574
             TE   I    YL LQ+  LE+
Sbjct  2136  TEIRSIFSRRYL-LQNTALEI  2155


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1846  PYLYC  1832
             PYLYC
Sbjct  252   PYLYC  256


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3730  ISSNSFV  3710
             ISSNSF+
Sbjct  1060  ISSNSFI  1066


 Score = 18.9 bits (37),  Expect(2) =  1128
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9100  LTRET  9086
             LTRET
Sbjct  1218  LTRET  1222


 Score = 18.5 bits (36),  Expect(2) =  1128
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  9000  SPQRKVPCSKLDVS  8959
             S + K+   KLDVS
Sbjct  1236  SSEQKI--AKLDVS  1247


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2211  VQISTNAFI  2185
             V IS N FI
Sbjct  1058  VAISSNSFI  1066


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6867  PEDCLK  6850
             PE+CLK
Sbjct  2737  PENCLK  2742


 Score = 20.2 bits (40),  Expect(2) =  2039
 Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 19/35 (54%)
 Frame = -1

Query  1351  GPNAF-----K----IVL--------QSGFAF--W  1304
             GP+AF     K    I L        Q GF F  W
Sbjct  202   GPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTW  236


 Score = 15.9 bits (30),  Expect(2) =  2039
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1397  SYSLT  1383
             SY LT
Sbjct  161   SYNLT  165


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/24 (45%), Positives = 14/24 (58%), Gaps = 5/24 (20%)
 Frame = +2

Query  2186  IKALVEICTE---MEKE-GKISKI  2245
             I  L ++CTE    EK  GKI K+
Sbjct  122   IRNL-QVCTEVGLVEKVLGKIEKV  144


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  4730  MRAFIVMSIK  4701
             +RAF  M IK
Sbjct  654   LRAFLLMFIK  663


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  6371  ITQACPKVSFEPIPIH  6418
             IT+   KV FE   IH
Sbjct  918   ITHS--KVTFE---IH  928


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4410  SLVCM  4396
             SLVCM
Sbjct  1840  SLVCM  1844


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7145  GNSNNESEI  7171
             GN N E EI
Sbjct  2046  GNQNSENEI  2054


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 9/24 (37%)
 Frame = +2

Query  7613  SNKSLEQIWNHTTWMEWDREINNY  7684
             SN    Q W H       REI N+
Sbjct  2209  SNMT--QRWQH-------REISNF  2223


 Score = 18.5 bits (36),  Expect(2) =  2482
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5022  QYLALA  5039
             Q+LALA
Sbjct  1530  QFLALA  1535


 Score = 17.2 bits (33),  Expect(2) =  2482
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5141  EPHNE  5155
             EP+NE
Sbjct  1553  EPQNE  1557


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
 Frame = +2

Query  6785  NNTLKQIAS----KLREQFGNNKTIIF  6853
             +N L   AS    KL + FGN+   IF
Sbjct  1131  DNSLSPAASEAGEKL-DMFGNDDKLIF  1156


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  5277  STPAQ-VSP  5254
             STPAQ V P
Sbjct  2081  STPAQLVAP  2089


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 12/45 (26%), Positives = 14/45 (31%), Gaps = 24/45 (53%)
 Frame = +3

Query  1245  LRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMT  1379
             + AEQ  QE               PD            TLEE +T
Sbjct  1019  MKAEQENQEL--------------PD----------EGTLEETLT  1039


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  3428  AAN--RETKL  3451
             A N  RETKL
Sbjct  1215  ATNLTRETKL  1224


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6214  NGERRD  6231
             NG+RRD
Sbjct  1293  NGQRRD  1298


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3216  FCTASVN  3196
             FCT SVN
Sbjct  2763  FCTFSVN  2769


 Score = 18.0 bits (35),  Expect(2) =  5179
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4532  DNSDIK  4549
             D SDIK
Sbjct  2353  DTSDIK  2358


 Score = 15.9 bits (30),  Expect(2) =  5179
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4578  LGIMEN  4595
             LG+M++
Sbjct  2379  LGVMDD  2384


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             PSPPP
Sbjct  9     PSPPP  13


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1116  IYKRW  1130
             IY RW
Sbjct  307   IYNRW  311


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6452  ILESQNQ  6432
             ILE QN+
Sbjct  1551  ILEPQNE  1557


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  1360  VAAGPNAFKIVL  1325
             V AGP+A   VL
Sbjct  1630  VSAGPDAISEVL  1641


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7913  MVNIPA  7896
             +VNIPA
Sbjct  1685  LVNIPA  1690


 Score = 18.0 bits (35),  Expect(2) =  7356
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2390  LRDVVF  2373
             LR VVF
Sbjct  1515  LRAVVF  1520


 Score = 17.6 bits (34),  Expect(2) =  7356
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3888  PAVINV  3905
             PAVI V
Sbjct  2534  PAVITV  2539


 Score = 15.5 bits (29),  Expect(2) =  7356
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3791  DKAQ  3802
             DKAQ
Sbjct  2502  DKAQ  2505


 Score = 15.1 bits (28),  Expect(2) =  7356
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2447  LKNMH  2433
             LK MH
Sbjct  1472  LKPMH  1476


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = +1

Query  964   QNGIECIQCMQGLL  1005
             Q G E I CM  LL
Sbjct  87    QEG-ESINCMVDLL  99


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2014  YSFMSTDF  1991
             Y ++ST+F
Sbjct  591   YTYLSTEF  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  515  YLSTAF  498
            YLST F
Sbjct  593  YLSTEF  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 12/25 (48%)
 Frame = -2

Query  7896  LT--LFTIE---------STAKTIL  7855
             LT  LF IE         ST KT++
Sbjct  1319  LTDLLFSIETDIQMWRSHST-KTVM  1342


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4385  IATDIQ  4402
             I TDIQ
Sbjct  1326  IETDIQ  1331


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8709  QGSSLVC  8689
             +G SLVC
Sbjct  1837  EGTSLVC  1843


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  2659  IQ-IIHVLID  2633
             IQ II +L D
Sbjct  1954  IQKIINILTD  1963


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9116  QAQIWS  9099
             QA++WS
Sbjct  107   QAEVWS  112


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  31   QAQIWS  14
            QA++WS
Sbjct  107  QAEVWS  112


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -2

Query  867  LLIM--LK  850
            LLIM  LK
Sbjct  615  LLIMHTLK  622


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 5/23 (21%)
 Frame = -1

Query  9049  LRARHSPVPPRPRLPGKSPAESP  8981
             L   HS +P    L GKS A SP
Sbjct  1472  LKPMHSLIP----L-GKSAAKSP  1489


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = -3

Query  1556  GP-AISGCVPFFATIETLNNLSL  1491
             GP AIS         E L  LSL
Sbjct  1633  GPDAIS---------EVLSTLSL  1646


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = -2

Query  2157  TFGPSIPGFNFTGTVSI  2107
             TF  SIP    T  VS+
Sbjct  1739  TFNTSIP----TNAVSV  1751


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  1896  NTVSSAPVSN  1867
             + VS  PVSN
Sbjct  1784  DSVSQDPVSN  1793


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1784  VSFNFP  1801
             V FNFP
Sbjct  2163  VMFNFP  2168


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7631  VPEIYY  7614
             +PE YY
Sbjct  2361  IPEFYY  2366


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1908  LISSNT  1891
             LI SNT
Sbjct  2574  LIASNT  2579


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4000  YQDNFSF  3980
             YQ+ F F
Sbjct  227   YQNGFTF  233


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1875  QEQM  1886
             QEQM
Sbjct  516   QEQM  519


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7703  RSVLSLC  7683
             R VL LC
Sbjct  542   RAVLELC  548


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2127  FTGTVSI  2107
             F GTV I
Sbjct  598   FIGTVNI  604


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5279  AIIRIL  5296
             AI RIL
Sbjct  892   AIFRIL  897


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3355  SLSEI  3369
             SLSEI
Sbjct  1574  SLSEI  1578


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2356  EVLSSL  2339
             EVLS L
Sbjct  1639  EVLSTL  1644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8527  RRRRWV  8544
             RRRR V
Sbjct  1991  RRRRFV  1996


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4289  LKTAVQ  4306
             LKTAV+
Sbjct  2009  LKTAVE  2014


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2321  DFRELNK  2341
             +FR+L K
Sbjct  2265  NFRDLSK  2271


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5020  RDPTLL  5003
             RD TLL
Sbjct  2662  RDATLL  2667


 Score = 16.3 bits (31),  Expect(2) = 14192
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3256  RSLSPYYY  3233
             R L  +YY
Sbjct  2439  RALNVFYY  2446


 Score = 15.9 bits (30),  Expect(2) = 14192
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2138  GMDGPKVKQ  2164
             G+DGP   Q
Sbjct  640   GLDGPRPNQ  648


 Score = 15.5 bits (29),  Expect(2) = 14192
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2012  IGTVL  2026
             +GTVL
Sbjct  611   VGTVL  615


 Score = 15.1 bits (28),  Expect(2) = 14192
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3349  INKLPL  3332
             IN L L
Sbjct  2406  INRLAL  2411


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8096  LIVTRI  8113
             LIVT I
Sbjct  274   LIVTSI  279


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  589  RVATVL  572
            RV TVL
Sbjct  610  RVGTVL  615


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2648  DDLYVGSD  2671
             DDL V SD
Sbjct  1046  DDLEVSSD  1053


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +2

Query  851   FSI-----IRRSHPT  880
             FSI       RSH T
Sbjct  1324  FSIETDIQMWRSHST  1338


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4833  QGVSIE  4850
             QG SIE
Sbjct  1396  QGLSIE  1401


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6619  GFSIVREIDR  6590
             G S VR+ DR
Sbjct  1496  GISPVRDLDR  1505


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  4204  QSPKSRSS  4227
             +SP SRSS
Sbjct  1766  ESPGSRSS  1773


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 4/20 (20%)
 Frame = +3

Query  7143  VVIATMSPRSSDL----EEE  7190
             VV  T+S  SS+L    +EE
Sbjct  2092  VVKGTLSVTSSELYFEVDEE  2111


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2889  FNFP  2878
             FNFP
Sbjct  2165  FNFP  2168


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8577  MTYKAAVDL  8603
             +TY  AV+L
Sbjct  2447  LTYEGAVNL  2455


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3049  IHSM  3038
             IHSM
Sbjct  2723  IHSM  2726


 Score = 15.1 bits (28),  Expect(2) = 23097
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  308   KFLAY  294
             K LAY
Sbjct  2121  KILAY  2125


 Score = 15.1 bits (28),  Expect(2) = 23097
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  201   RSLFGR  184
             RS F R
Sbjct  2139  RSIFSR  2144


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  465  FAVNPGLLETSE  500
            FAV  GL E  E
Sbjct  48   FAVLTGLVEVGE  59


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6675  IQEKESV  6695
             IQE ES+
Sbjct  86    IQEGESI  92


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4485  PFQSGF  4468
             P+Q GF
Sbjct  226   PYQNGF  231


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -2

Query  6492  FVHGPVPLNVLLLH  6451
             FVH P     L+L+
Sbjct  443   FVHSP---HALMLQ  453


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  927  MQMLKETI  950
            M++LK  I
Sbjct  506  MELLKNSI  513


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4498  ELCWSFPK  4475
             ELC  F K
Sbjct  546   ELCLAFSK  553


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2647  HVLIDNYVWI  2618
             HVL +  +WI
Sbjct  571   HVLLNPAIWI  580


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2767  FFLMF  2753
             F LMF
Sbjct  657   FLLMF  661


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = +2

Query  7190  DM-------RDNWRS  7213
             DM       R+N RS
Sbjct  845   DMIKLFNNSRENRRS  859


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7401  NCLAC  7387
             NCL C
Sbjct  1454  NCLEC  1458


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6562  SSRRRGS  6582
             S RRR S
Sbjct  1599  SARRRDS  1605


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6576  SSSARLP  6556
             SS A LP
Sbjct  1772  SSNAKLP  1778


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6557  HLTAVELI  6534
             H TA +LI
Sbjct  1947  HVTATQLI  1954


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3465  YPAFP  3451
             YP FP
Sbjct  2243  YPVFP  2247


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  190   EQGPESER  213
             +QGPE  R
Sbjct  2432  QQGPEAVR  2439


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8246  TDRVIEVV  8269
             T R I+VV
Sbjct  2627  TGRLIQVV  2634


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 2/9 (22%)
 Frame = -1

Query  4579  NDLCFSSWH  4553
             ND  F  WH
Sbjct  2850  ND--FNRWH  2856


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7850  GLRIVFAVL  7876
             G R  FAVL
Sbjct  43    GIRMKFAVL  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4718  IVMSIK  4701
             IV SIK
Sbjct  275   IVTSIK  280


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6588  DLSISRTML  6614
             DL I  T+L
Sbjct  494   DLTICSTLL  502


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  6059  KN--DMVEQM  6082
             KN   M EQM
Sbjct  510   KNSIAMQEQM  519


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7634  IWNHT  7648
             IW HT
Sbjct  578   IWIHT  582


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 21/38 (55%)
 Frame = +2

Query  2531  YNVLPQGWKGSPAIFQSSMTKIL-EPF-----RKQNPD  2626
             YNVL          F+     IL E        KQ PD
Sbjct  784   YNVL----------FE-----ILIEQIGTQVIHKQHPD  806


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7168  DLQTWR  7185
             D Q WR
Sbjct  1329  DIQMWR  1334


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3053  HNTLH  3039
             HNT H
Sbjct  1355  HNTIH  1359


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1175  QHSGHKTR  1198
             QHS  KTR
Sbjct  1460  QHSQLKTR  1467


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5383  APFLAL  5366
             A FLAL
Sbjct  1529  AQFLAL  1534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  2812  DSTAYSAARKR  2844
             +ST  S AR R
Sbjct  1595  EST--SSARRR  1603


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4286  VQPDLLP  4266
             V P LLP
Sbjct  1695  VDPALLP  1701


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  850   NMGIT  836
             NM IT
Sbjct  1793  NMSIT  1797


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6520  SMCTLYCAD  6494
             S+C  Y AD
Sbjct  1919  SLCAQYSAD  1927


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1922  IFLAN  1908
             IF+AN
Sbjct  2155  IFMAN  2159


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3179  TNDVKQL  3199
             T D+K+L
Sbjct  2354  TSDIKEL  2360


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  482  PVRNIR  499
            P+R IR
Sbjct  40   PIRGIR  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5880  QSIMGYL  5900
             Q I+ YL
Sbjct  678   QAILNYL  684


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  7042  KHVAESRKSNV  7074
             KH A  RK  V
Sbjct  748   KHLAPKRKAEV  758


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8149  QILVES  8166
             QI VES
Sbjct  1198  QIAVES  1203


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8192  KNSAVS  8209
             K SAVS
Sbjct  1731  KKSAVS  1736


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  771   AISPRTLN  794
             A+SP T N
Sbjct  1734  AVSPSTFN  1741


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3572  VNIVTD  3589
             +NI TD
Sbjct  1958  INILTD  1963


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5131  PLVFW  5117
             PL FW
Sbjct  1976  PLEFW  1980


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8684  LPHTR  8698
             LP+TR
Sbjct  2191  LPQTR  2195


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5492  MKQTWQ  5475
             M Q WQ
Sbjct  2211  MTQRWQ  2216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4095  LPANF  4081
             LP NF
Sbjct  2262  LPTNF  2266


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7691  LIHSL  7705
             LIHS+
Sbjct  2722  LIHSM  2726


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  7112  NITGLLLTRDG  7144
             NI    L RDG
Sbjct  2781  NIRAIQLSRDG  2791


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4743  NLFLDE  4726
             +LFL E
Sbjct  397   DLFLAE  402


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1130  DNPGI  1144
             DNP I
Sbjct  438   DNPSI  442


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  1365  EEMMTACQG  1391
             E+M+ AC G
Sbjct  517   EQML-ACKG  524


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8873  LRVI  8862
             LRVI
Sbjct  721   LRVI  724


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7694  LSLC  7683
             LSLC
Sbjct  871   LSLC  874


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4284  NILRQQ  4301
             NI R+Q
Sbjct  934   NIFREQ  939


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5288  RILQQLLF  5311
             R L  LLF
Sbjct  1317  RLLTDLLF  1324


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4841  DSLTQMPVS  4815
             DS  Q PVS
Sbjct  1784  DSVSQDPVS  1792


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8008  SISER  8022
             SI ER
Sbjct  1795  SITER  1799


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7269  RQREE  7283
             RQR E
Sbjct  1905  RQRAE  1909


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2357  RSLEF  2343
             R LEF
Sbjct  1975  RPLEF  1979


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3166  HSCIF  3152
             H CIF
Sbjct  2015  HVCIF  2019


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3062  KDLIAE  3079
             K+LI E
Sbjct  2358  KELIPE  2363


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6849  IIVLLFP  6829
             I VL FP
Sbjct  2509  IMVLKFP  2515


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7887  IELGRD  7904
             I+L RD
Sbjct  2785  IQLSRD  2790


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6828  NCSLNLLAIC  6799
             NC  +LL  C
Sbjct  93    NCMVDLLEKC  102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6338  SYKLT  6352
             SY LT
Sbjct  161   SYNLT  165


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +1

Query  4477  LERTSK-----APLE  4506
             LE  SK     A LE
Sbjct  532   LEKSSKSHVSRAVLE  546


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  225  SSLDAGLGLLK  257
            S L  G+ LLK
Sbjct  556  SNLQNGMPLLK  566


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  961  LQNG  972
            LQNG
Sbjct  558  LQNG  561


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6644  QMCSAVLL  6621
             Q+C  VLL
Sbjct  567   QLCDHVLL  574


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5001  VLLDIHT  4981
             VLL  HT
Sbjct  614   VLLIMHT  620


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2265  ILQYL  2279
             IL YL
Sbjct  680   ILNYL  684


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6094  YILMHL  6077
             Y L HL
Sbjct  745   YFLKHL  750


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5454  IAIGTSSF  5431
             +AI   SF
Sbjct  1058  VAISSNSF  1065


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3901  FITAG  3887
             FIT G
Sbjct  1065  FITTG  1069


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  4053  VSAGITSAS  4027
             V A I S S
Sbjct  1078  VTASISSPS  1086


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1748  SPSEAGA  1768
             SPSE  A
Sbjct  1084  SPSEEDA  1090


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2142  IPGFN  2128
             IP FN
Sbjct  1306  IPEFN  1310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  471   VNPGLL  488
             V+P LL
Sbjct  1695  VDPALL  1700


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  213   PFAFRSLFGRH  181
             PF  R L G H
Sbjct  1820  PFLSRTLLGSH  1830


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6600  SRTML  6614
             SRT+L
Sbjct  1823  SRTLL  1827


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  391   IFSHR  377
             IFS R
Sbjct  2141  IFSRR  2145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6635  NTSVEI  6652
             NT  EI
Sbjct  2150  NTALEI  2155


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4867  YLFFL  4853
             YL FL
Sbjct  2225  YLMFL  2229


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  9125  ESSQAQIWS  9099
             E  +AQI S
Sbjct  2465  EAVEAQIRS  2473


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  40    ESSQAQIWS  14
             E  +AQI S
Sbjct  2465  EAVEAQIRS  2473


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  489   LTGQD  475
             LTG+D
Sbjct  2693  LTGHD  2697


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9100  LTRETQY  9080
             L R+ QY
Sbjct  2787  LSRDGQY  2793


>ref|NP_001140178.1|  lysine-specific demethylase 5D isoform 3 [Homo sapiens]
Length=1482

 GENE ID: 8284 KDM5D | lysine (K)-specific demethylase 5D [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
 Frame = +2

Query  2615  QNPDIVIYQY--MDDLY----VGSDLEIGQHRTKIEELRQ  2716
             QN D    +Y  +DDL     VG DL +G      EELRQ
Sbjct  970   QNGD----HYPCLDDLEGLVAVGRDLPVG-----LEELRQ  1000


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 11/22 (50%)
 Frame = -1

Query  6757  CLSHISYFSYCN---KCSPWSS  6701
             CLSHI      N   KCS  SS
Sbjct  663   CLSHI------NDLCKCS--SS  676


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  2354  FWEVQ---LGIP  2380
             FWE+Q   L IP
Sbjct  92    FWEIQGSSLKIP  103


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8948  LQELLT  8965
             LQELLT
Sbjct  903   LQELLT  908


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  7914  NGE-YPCL  7894
             NG+ YPCL
Sbjct  971   NGDHYPCL  978


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LL+RG+Q
Sbjct  834   LLERGQQ  840


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  991   MQGLL  1005
             MQGLL
Sbjct  880   MQGLL  884


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2705  ELRQHL  2722
             ELRQ+L
Sbjct  1240  ELRQQL  1245


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  1680  LQSRPEPTAPPEE  1718
             LQ  PEPT   EE
Sbjct  159   LQPDPEPT---EE  168


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4482  KDQQSSSGKV  4511
             KD+QS  G V
Sbjct  215   KDEQSGGGNV  224


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQA QE
Sbjct  319   EQATQE  324


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  552  EELRSL  569
            EELR L
Sbjct  725  EELRAL  730


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5276  EAIIR  5290
             EAIIR
Sbjct  933   EAIIR  937


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -2

Query  5007  CYVLLDIHT*G*LC  4966
             CY LL++     LC
Sbjct  1025  CYTLLEV-----LC  1033


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7715  ILQLR  7701
             ILQLR
Sbjct  1091  ILQLR  1095


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  409   PPGLNRI  389
             PP L+RI
Sbjct  1355  PPDLDRI  1361


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8027  RIRSLIE  8007
             RIR L E
Sbjct  1360  RIRTLLE  1366


 Score = 17.2 bits (33),  Expect(2) =  6686
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2288  SLWQILE  2268
             S WQ L+
Sbjct  1345  SIWQLLQ  1351


 Score = 16.8 bits (32),  Expect(2) =  6686
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2356  EVLSSL  2339
             E LSSL
Sbjct  1302  ELLSSL  1307


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  5991  QACVAQTL  5968
             +AC+AQ L
Sbjct  756   EACIAQVL  763


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -1

Query  1540  AVCPSL-P--QL  1514
             A CPSL P  QL
Sbjct  1463  AACPSLMPLLQL  1474


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5165  ELLEELKN  5188
             ELL+ LKN
Sbjct  743   ELLQRLKN  750


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7681  LHKLNTLLN  7707
             LH L TL+N
Sbjct  497   LHQLVTLMN  505


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4947  RKALL  4961
             RKALL
Sbjct  614   RKALL  618


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  8136  PL-----RPRSSTIL  8107
             PL     RPR  TIL
Sbjct  1175  PLCMRSRRPRLETIL  1189


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2663  GSDLE  2677
             GSDLE
Sbjct  1298  GSDLE  1302


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  447   SRELER  464
             SR LER
Sbjct  1379  SRALER  1384


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4201  LQSPKSRSS  4227
             LQS   RSS
Sbjct  1405  LQSKRARSS  1413


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1350  PAATLE  1367
             P ATLE
Sbjct  928   PPATLE  933


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  105   TLLEAL  88
             TLLE L
Sbjct  1027  TLLEVL  1032


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4317  SSTILKE  4337
             SST LK+
Sbjct  225   SSTLLKQ  231


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7560  PQIPR  7546
             P+IPR
Sbjct  292   PEIPR  296


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3062  LMGHNTL  3042
             LM  NTL
Sbjct  503   LMNPNTL  509


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -2

Query  4422  CF-C-NSLVCMS  4393
             C+ C + LVC+S
Sbjct  654   CYDCPDGLVCLS  665


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6421  LCPGWF  6438
             LC  WF
Sbjct  1134  LCQDWF  1139


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8476  VAIQQLP  8496
             VA Q LP
Sbjct  1193  VALQRLP  1199


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  972   PILQLP  955
             P+L+LP
Sbjct  1314  PVLELP  1319


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  2865  MSLTVQLSFS  2836
             M L  QLS+S
Sbjct  1469  MPL-LQLSYS  1477


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  940  KRPSMRKLQ  966
            K P + KLQ
Sbjct  172  KHPELKKLQ  180


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4394  DIQTKE  4411
             DI+ KE
Sbjct  376   DIHSKE  381


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  202  ESERE  216
            E ERE
Sbjct  624  EAERE  628


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8527  RRRR  8538
             RRRR
Sbjct  1384  RRRR  1387


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3713  CVLVPMPDRP  3684
             C L P+P+ P
Sbjct  286   CLLPPLPEIP  295


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1310  ILDQQGFCH  1284
             +LDQ   CH
Sbjct  414   VLDQSVLCH  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7623  DLLLQL  7606
             DLL QL
Sbjct  495   DLLHQL  500


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +3

Query  8193  RIVL-----LACSMPQ  8225
             R+ L     L C M Q
Sbjct  784   RVLLEQMGSLPCAMHQ  799


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1416  RVLAEAM  1436
             RVL E M
Sbjct  784   RVLLEQM  790


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  214  ETRGALST  237
            E R AL T
Sbjct  816  EAREALAT  823


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5283  MASTP  5269
             MAS P
Sbjct  1110  MASSP  1114


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7015  GDCVTS  6998
             GD VTS
Sbjct  1284  GDSVTS  1289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  434  YSMGKQ  451
            YS+ KQ
Sbjct  113  YSLSKQ  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  311  SKFLAYS  291
            SKF  YS
Sbjct  147  SKFSSYS  153


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1352  SGYTRR  1369
             S Y RR
Sbjct  150   SSYSRR  155


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  605  KDRDK  619
            KD DK
Sbjct  196  KDKDK  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7681  LHKL  7692
             LHKL
Sbjct  693   LHKL  696


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  2230  ENFKNWA  2250
             E F  WA
Sbjct  701   ESFDTWA  707


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7598  KAQQW  7584
             KAQ W
Sbjct  958   KAQAW  962


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8631  LEGLI  8645
             LEGL+
Sbjct  981   LEGLV  985


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1944  ELEVL  1958
             EL+VL
Sbjct  1002  ELQVL  1006


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8984  SLVASS  8967
             SL ASS
Sbjct  1108  SLMASS  1113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  4818  DW-HLGQGVSI  4847
             DW H GQ VS+
Sbjct  1137  DWFH-GQCVSV  1146


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  294   LTSRRPS  274
             LTS  PS
Sbjct  1150  LTSPKPS  1156


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  641   QDRGR  655
             QDR R
Sbjct  1219  QDRAR  1223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             +AQ RV
Sbjct  76    EAQTRV  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8802  LSYLAQ  8785
             L YL Q
Sbjct  83    LNYLDQ  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8715  QNYTPGP  8735
             Q Y PGP
Sbjct  180   QIYGPGP  186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2106  GLMGK  2092
             GLM K
Sbjct  192   GLMAK  196


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5876  VTVYYG  5893
             VTV YG
Sbjct  369   VTVEYG  374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6484  WSCSI  6470
             WS SI
Sbjct  452   WSYSI  456


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2362  FPEVL  2348
             FPE L
Sbjct  587   FPETL  591


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7171  DLGLIVAI  7148
             DL L VA+
Sbjct  592   DLNLAVAV  599


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6041  ENFNMWKN  6064
             E F+ W N
Sbjct  701   ESFDTWAN  708


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1576  GNVERKDT  1599
             G V R DT
Sbjct  768   GQVARMDT  775


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7878  ESTAKTILK  7852
             E   KT LK
Sbjct  1013  EKASKTFLK  1021


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7493  QLQA  7504
             QLQA
Sbjct  1244  QLQA  1247


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  7165  RDLQTWRRR  7191
             R L+  RRR
Sbjct  1380  RALERRRRR  1388


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  972   PILQL  958
             P LQL
Sbjct  1470  PLLQL  1474


>ref|NP_056127.2|  fragile site-associated protein [Homo sapiens]
Length=5005

 GENE ID: 84162 KIAA1109 | KIAA1109 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 6/20 (30%)
 Frame = +3

Query  6354  VVTPQ----SLHRPVQRYPL  6401
             VVTP     SLHRP Q  PL
Sbjct  2152  VVTPAFKGVSLHRPAQ--PL  2169


 Score = 21.4 bits (43),  Expect(2) =   271
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  939  LTFAWLLDV  913
            L +AWL DV
Sbjct  910  LEYAWLIDV  918


 Score = 18.5 bits (36),  Expect(2) =   271
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  1045  AM----SLPLGS  1022
             AM     LPLGS
Sbjct  896   AMFSAEGLPLGS  907


 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -2

Query  8370  HYFLTTCHPS-YS  8335
             H FL  CHPS YS
Sbjct  591   HLFLPDCHPSKYS  603


 Score = 23.1 bits (47),  Expect =   406
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4009  MNCYQ  3995
             MNCYQ
Sbjct  1500  MNCYQ  1504


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  2309  RKL----VDFRELN  2338
             RK     VD RELN
Sbjct  3534  RKIMKRIVDIRELN  3547


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  1985  VSDHTVLL  1962
             VS+HT LL
Sbjct  2209  VSEHTMLL  2216


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/30 (36%), Positives = 12/30 (40%), Gaps = 10/30 (33%)
 Frame = +2

Query  6953  WFN---STWSTE-------GSNNTEGSDTI  7012
             WFN    T   E         NNTE S T+
Sbjct  4758  WFNYVTATRNEELNLLRNVDANNTENSTTV  4787


 Score = 21.0 bits (42),  Expect(2) =  1144
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = +2

Query  4487  PAKLLWKGEGAVVIQDNS-DI  4546
             P  L+  GEG VV Q N  DI
Sbjct  275   PPRLM--GEGFVVMQSNDVDI  293


 Score = 15.9 bits (30),  Expect(2) =  1144
 Identities = 3/7 (42%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4595  QMAGDDC  4615
             +M  +DC
Sbjct  314   EMSSEDC  320


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            FFFPP
Sbjct  357  FFFPP  361


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3039  MECIMT  3056
             M CIMT
Sbjct  2066  MGCIMT  2071


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = +3

Query  8913  FHHVARELHPEYFK  8954
             FH+VA      YFK
Sbjct  3233  FHQVA------YFK  3240


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5119  WGLFHL  5102
             W LFHL
Sbjct  4678  WALFHL  4683


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3487  KSCHPN  3504
             K CHPN
Sbjct  609   KNCHPN  614


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = -3

Query  8951  EVLR--------MQLSGHVM  8916
             EVLR        +QL  H M
Sbjct  878   EVLREGHINLSGLQLRAHAM  897


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 12/26 (46%)
 Frame = -3

Query  7574  VFQSNPKSPGAVDPLGIFPQPGFLPG  7497
             VF S PK PG           GF PG
Sbjct  3695  VF-SSPKTPG-----------GFSPG  3708


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5492  MKQTWQ  5475
             M QTWQ
Sbjct  473   MPQTWQ  478


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 3/22 (13%)
 Frame = +2

Query  8234  VAEGTDRVIE-VVQGACRAIRH  8296
             VAE  DR IE  V+  C   RH
Sbjct  1633  VAEALDRYIEAMVH--CASTRH  1652


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +1

Query  3379  VRERTHSRSR--NLL  3417
             VR  TH  SR  NLL
Sbjct  2016  VRSHTHAFSRQLNLL  2030


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3380  LEKEPIV  3400
             LEK PIV
Sbjct  2971  LEKKPIV  2977


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 4/20 (20%)
 Frame = -1

Query  6253  DIERAVFYLSF----LHYHS  6206
             D E  VFY       LHY S
Sbjct  3868  DLETTVFYIPGVDVKLHYNS  3887


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
 Frame = -1

Query  475   LTANRSSSL-LAHTIC---FNLYFFFP  407
             LT   SSS  L  T C   F LY F P
Sbjct  4138  LTSSSSSSSGLSFTACMSDFSLYVFHP  4164


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 9/26 (34%)
 Frame = -2

Query  5475  MKATLFTIA----IGTSSF-----RL  5425
             M  TL  I     IG  SF     RL
Sbjct  4236  MDTTLINISAVCDIGSASFKYDMRRL  4261


 Score = 18.5 bits (36),  Expect(2) =  2424
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 8/21 (38%)
 Frame = -2

Query  3438  LLAAPST*KVSAPTMGSFSNW  3376
             LL  PS   V      SF NW
Sbjct  2341  LLSEPSS--V------SFYNW  2353


 Score = 16.8 bits (32),  Expect(2) =  2424
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3456  FPNLVSLL  3433
             FP L  LL
Sbjct  2301  FPSLHNLL  2308


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  2675  EIGQHRT--KIE  2704
             EIG  RT  KIE
Sbjct  170   EIGRTRTQSKIE  181


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5183  KNEAVRHF  5206
             K EA RHF
Sbjct  1091  KHEAQRHF  1098


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5490  ETNLAMK  5470
             +TNL MK
Sbjct  1705  QTNLTMK  1711


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  8329  PFQALSYSS  8303
             P++ LSY S
Sbjct  2258  PYHSLSYTS  2266


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8331  FCYKM  8345
             FCY M
Sbjct  2459  FCYRM  2463


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8838  HPVSLHGM  8861
             HP  LH M
Sbjct  2904  HPATLHSM  2911


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +1

Query  3667  VNKKGKGLSGMGTSTQRN  3720
             VN     LSG  T T+RN
Sbjct  3776  VNR---SLSG--TATERN  3788


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  8984  SLVASSMSA  8958
             SLV SS SA
Sbjct  4027  SLVSSSTSA  4035


 Score = 18.5 bits (36),  Expect(2) =  4135
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  7177  SEDLGLI-VAI  7148
             S +LGLI V I
Sbjct  1072  SANLGLITVDI  1082


 Score = 15.5 bits (29),  Expect(2) =  4135
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7223  YIIHFSNC  7200
             YI +  NC
Sbjct  1046  YIEQLNNC  1053


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7631  VPEIYY  7614
             V EIYY
Sbjct  85    VREIYY  90


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5204  FPRIW  5218
             +PRIW
Sbjct  467   YPRIW  471


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2234  FSLPF  2220
             FSLPF
Sbjct  565   FSLPF  569


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  8139  HPL--RPRSSTILV  8104
             HPL  RP   T+LV
Sbjct  801   HPLALRPWDITVLV  814


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1954  TSNSPY  1937
             TSN PY
Sbjct  1579  TSNTPY  1584


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3357  GGVLTNSHS  3331
             GGVLT   S
Sbjct  1928  GGVLTSNNS  1936


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  833   RSDTHVFS  856
             RS TH FS
Sbjct  2017  RSHTHAFS  2024


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6171  KSVHFKL  6151
             KSVHF L
Sbjct  2077  KSVHFPL  2083


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4370  RIVDI  4384
             RIVDI
Sbjct  3539  RIVDI  3543


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 9/28 (32%)
 Frame = -1

Query  967   SAASSLMVSFNICMAA*CPPTVFSM-VF  887
             S  S L  SF  CM        FS+ VF
Sbjct  4143  SSSSGL--SFTACMSD------FSLYVF  4162


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3775  IFRW  3786
             IFRW
Sbjct  105   IFRW  108


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3237  TMLSV  3223
             TMLSV
Sbjct  686   TMLSV  690


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2749  QKTSER  2766
             QKTS+R
Sbjct  695   QKTSDR  700


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3026  LESLCF  3009
             LE LCF
Sbjct  839   LERLCF  844


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8559  QVPLR  8573
             QVPLR
Sbjct  1221  QVPLR  1225


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6369  SLHRP  6383
             SLHRP
Sbjct  1529  SLHRP  1533


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  2850  QLSFSGSTIGC  2818
             +LSFSG T  C
Sbjct  2468  HLSFSG-TLDC  2477


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8071  LPPLE  8085
             LPPLE
Sbjct  2504  LPPLE  2508


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3854  NLPPV  3868
             NLPPV
Sbjct  3048  NLPPV  3052


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1786  YSSLSIGSC  1760
             YSS S GSC
Sbjct  3685  YSSNSEGSC  3693


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = -1

Query  265   RARF---SKPSPASR  230
             R RF    KPS  SR
Sbjct  3740  RERFYIYRKPSHTSR  3754


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/19 (36%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = +2

Query  2081  CTLNF--------PISPIE  2113
             C L+F        PI P+E
Sbjct  3981  CLLDFLEKALETIPITPVE  3999


 Score = 16.8 bits (32),  Expect(2) =  5778
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  6734  KIGNMRQAHCN  6766
             K G  R A CN
Sbjct  1014  KMGAIRVANCN  1024


 Score = 16.3 bits (31),  Expect(2) =  5778
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6856  AILRR  6870
             A+LRR
Sbjct  1060  AVLRR  1064


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  6282  KNMHFFINLI  6311
             KN  FF +LI
Sbjct  495   KN--FFTDLI  502


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6798  FKVLFH  6781
             FK++FH
Sbjct  523   FKIMFH  528


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3680  EKVYLA  3697
             E VYLA
Sbjct  550   ENVYLA  555


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  2432  DAYFSVPLDEDF  2467
             +AYFS    E+F
Sbjct  1392  EAYFSAA--EEF  1401


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LLDRG Q
Sbjct  1568  LLDRGMQ  1574


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5153  EWTLE  5167
             EWTL+
Sbjct  1603  EWTLD  1607


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2530  VQCAST  2547
             V+CAST
Sbjct  1645  VHCAST  1650


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  504   SLLMFLTG  481
             SLL +LTG
Sbjct  2292  SLLSYLTG  2299


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8805  LLSYL  8791
             LLSYL
Sbjct  2293  LLSYL  2297


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = -1

Query  451   LLAHT-I--------CFNLYF  416
             LL HT I        C+ +YF
Sbjct  2445  LLSHTGIQSQDTMPFCYRMYF  2465


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3339  SHSGIQ  3322
             SH GIQ
Sbjct  2447  SHTGIQ  2452


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  7896  LTLFTIEST  7870
             L L TIEST
Sbjct  3364  LVL-TIEST  3371


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 2/19 (10%)
 Frame = -1

Query  9088  TQYRQKAAAYMQ--DLRAR  9038
             T YR  AA   Q  +LR R
Sbjct  3516  TDYRRQAASASQPGELRGR  3534


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3804  MNMRNI  3821
             MNM N+
Sbjct  4417  MNMSNV  4422


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6959  NSTWSTEG  6982
             N TW T G
Sbjct  4425  NTTWTTSG  4432


 Score = 16.8 bits (32),  Expect(2) =  9601
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +2

Query  2945  RGTKALTE  2968
             RGTK  TE
Sbjct  1687  RGTK--TE  1692


 Score = 15.1 bits (28),  Expect(2) =  9601
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3089  QGQGQ  3103
             QGQ Q
Sbjct  1701  QGQAQ  1705


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4817  RLAFG  4831
             RLAFG
Sbjct  211   RLAFG  215


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  741  QNIQGQM  761
            +NI+G+M
Sbjct  309  ENIEGEM  315


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8694  VCGRSTD  8674
             VCG  TD
Sbjct  334   VCGKGTD  340


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5988  PVYPQ  6002
             P+YPQ
Sbjct  666   PIYPQ  670


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -1

Query  7201  VP---HISSSRSED  7169
             VP   H SSS SE+
Sbjct  1222  VPLRSHSSSSSSEE  1235


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8719  TTHQGQ  8736
             TT QGQ
Sbjct  1698  TTNQGQ  1703


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6797  KQIASKL  6817
             K+IA KL
Sbjct  1816  KEIAAKL  1822


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 7/17 (41%)
 Frame = -1

Query  2521  NPWCLIVYTRYGKCSIL  2471
             NP CL        C IL
Sbjct  2100  NPSCLL-------CNIL  2109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7466  LQLTV  7480
             LQLTV
Sbjct  3333  LQLTV  3337


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8380  HPITLL  8363
             HP TLL
Sbjct  3807  HPTTLL  3812


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7238  KIEPLGV  7258
             KI+P GV
Sbjct  4942  KIDPVGV  4948


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  8907  LAFHHVAR  8930
             L FHH AR
Sbjct  4955  LGFHH-AR  4961


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2353  VLSSLIK  2333
             VLS LIK
Sbjct  4979  VLSVLIK  4985


 Score = 16.3 bits (31),  Expect(2) = 10940
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6239  CSFNIS  6256
             C F IS
Sbjct  2554  CNFTIS  2559


 Score = 15.1 bits (28),  Expect(2) = 10940
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6212  IMEK  6223
             +MEK
Sbjct  2524  VMEK  2527


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  105  TLLEA  91
            TLLEA
Sbjct  452  TLLEA  456


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5106  WNKPQ  5120
             WN PQ
Sbjct  471   WNMPQ  475


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6436  FCDSKM  6453
             FC+SK+
Sbjct  970   FCESKL  975


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1238  IEPVYIV  1218
             IE  YIV
Sbjct  1476  IEHLYIV  1482


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4282  SLISYL  4265
             SL SYL
Sbjct  2292  SLLSYL  2297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  4188  NLEFPTIP  4211
             NL  PTIP
Sbjct  2385  NL--PTIP  2390


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 10/30 (33%)
 Frame = +2

Query  2042  VNIIGRNLLTQIGCTLN-----FPISPIET  2116
             VNI+   LL  I  T N     FP SP  T
Sbjct  2834  VNIV---LLEGI--TPNIQLEDFPTSPTST  2858


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8694  VCGRSTDQ  8671
             VC R T Q
Sbjct  3427  VCSRTTGQ  3434


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3317  LANTLSTM  3294
             L NTL T+
Sbjct  3471  LGNTLTTL  3478


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 26/53 (49%)
 Frame = +3

Query  8352  KW----------SKS-SVIGWPTVRERMRRAEPAADRVG-----------AAS  8444
             KW          SKS S  G P    RM   E A  RVG           AAS
Sbjct  3605  KWGLSYKPSYSRSKSISASGRPPLK-RM---ERASSRVGETEELPEIRVDAAS  3653


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1501  LLSVSI  1518
             LLSV I
Sbjct  3674  LLSVTI  3679


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  6977  EG----SNNTEGS  7003
             EG    S N EGS
Sbjct  3680  EGPSHYSSNSEGS  3692


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = -2

Query  7884  TIESTAKTILKPTKPPTI  7831
             T++S   T L P  PP I
Sbjct  3931  TVQSKTNTLL-PPQPPPI  3947


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  847   MG----ITSGLK  824
             MG     TSGLK
Sbjct  4423  MGNTTWTTSGLK  4434


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1312  AFWT  1301
             AFWT
Sbjct  4689  AFWT  4692


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  8683  STTHKATSLIS  8715
             STT K  SL S
Sbjct  4784  STTVKNSSLLS  4794


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = +3

Query  2073  RLVAL*IFPLALLRLY  2120
             R V L I  L L RLY
Sbjct  50    RNVGL-ILTLVLNRLY  64


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +1

Query  7138  RWW  7146
             RWW
Sbjct  107   RWW  109


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8906  PSISSRGP  8929
             PS SSR P
Sbjct  705   PSTSSRPP  712


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  890   HHAKH  904
             HH KH
Sbjct  1088  HHSKH  1092


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7448  EAQQHLLQ  7471
             EAQ H L+
Sbjct  1093  EAQRHFLE  1100


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  823   AFSST  809
             AFSST
Sbjct  1158  AFSST  1162


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7411  YSAAAEQF  7434
             Y  AAE+F
Sbjct  1394  YFSAAEEF  1401


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +2

Query  1778  GTVSFNFPQ--VTL  1813
             G +S N PQ   TL
Sbjct  2895  GAISINIPQHPATL  2908


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 19/38 (50%)
 Frame = -2

Query  7623  DLLLQLAFQGTAVVQMSF-------------PEQPQIP  7549
             DLL +L F     VQ  F              EQP IP
Sbjct  3105  DLLNHLVF-----VQKVFMKEVNEVIQKVSGGEQP-IP  3136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/35 (37%), Positives = 16/35 (45%), Gaps = 13/35 (37%)
 Frame = +1

Query  7744  RIIGIR*MGKFVELV*HNKLAVVYKIIHNDSRRLG  7848
             RI+ IR      EL   N  A   K+I +D   LG
Sbjct  3539  RIVDIR------EL---NEQA---KVI-DDLKKLG  3560


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8879  FSLRVIHP  8856
             FSL V HP
Sbjct  4157  FSLYVFHP  4164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2790  MNSILIN  2810
             M+  LIN
Sbjct  4236  MDTTLIN  4242


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1998  QISMSI  1981
             +ISMS+
Sbjct  4448  EISMSV  4453


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6538  NSTAVK  6555
             NST VK
Sbjct  4783  NSTTVK  4788


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4112  IHTDNGSN  4135
             IH DN S+
Sbjct  4898  IHDDNSSD  4905


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4474  WISAVPVI  4451
             W S +PVI
Sbjct  196   WRSLIPVI  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7073  YAPPISGQ  7096
             Y P I GQ
Sbjct  431   YTPAIKGQ  438


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1593  LPFHISNS  1570
             L FHI  S
Sbjct  459   LAFHINAS  466


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  8159  WNLLQYWSQ-EL  8191
             WN+ Q W Q EL
Sbjct  471   WNMPQTW-QCEL  481


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  913  PPTVFSMV-----FK  884
            PP +FS V     FK
Sbjct  510  PPDIFSFVPYTWNFK  524


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  3296  MFPMFPFVWA  3267
             MF  F  +WA
Sbjct  526   MFHQFEMIWA  535


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  2368  LNFPEVLSS  2342
             ++F EV SS
Sbjct  760   MDFEEVISS  768


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             R YWL
Sbjct  1064  RAYWL  1068


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  973   SHSAASS  953
             SHS  SS
Sbjct  1226  SHSSSSS  1232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5345  SAMSTPNSE  5319
             S MS  +SE
Sbjct  1384  SSMSMADSE  1392


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6398  FEPI  6409
             FEPI
Sbjct  1401  FEPI  1404


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5278  SHNKNS  5295
             S NKNS
Sbjct  2652  SRNKNS  2657


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 9/26 (34%)
 Frame = +2

Query  4109  TIHTDNGSNFTGATV------RAACW  4168
             TIH D+ S+    TV       A CW
Sbjct  2681  TIHMDD-SD--SITVSEQSEPSAECW  2703


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  1164  YS----PTSILD  1187
             YS    PT IL+
Sbjct  2713  YSLISDPTGILE  2724


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -3

Query  6806  LSVLKCYSI  6780
             L V KC SI
Sbjct  2864  LTVVKC-SI  2871


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1356  ATLEEMM  1376
             ATL  MM
Sbjct  2906  ATLHSMM  2912


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6465  RSMEQD  6482
             RS++QD
Sbjct  3829  RSLDQD  3834


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4360  TVPPNPP  4340
             T PP PP
Sbjct  3921  TSPPSPP  3927


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 11/39 (28%)
 Frame = +2

Query  6560  SLAEEEVVIRS---VNFTDNA-KTI-IVQLNTSVEINCT  6661
             SL EE V+  S    +F + A  TI I    T VE N T
Sbjct  3971  SLPEEMVI--SPCLLDFLEKALETIPI----TPVERNYT  4003


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1941  GELEVL  1958
             GELE L
Sbjct  4082  GELETL  4087


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  2393  TLRDVVFLIEL  2361
             TL  VVF I L
Sbjct  4402  TL--VVFAINL  4410


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -1

Query  7516  SQDSCLELLDA  7484
             SQ+   +LLDA
Sbjct  4613  SQE---QLLDA  4620


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  523   SYNH  534
             SYNH
Sbjct  4801  SYNH  4804


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5411  SIQEVSLK  5434
             S Q+ SLK
Sbjct  4831  SLQDASLK  4838


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  6045  ILTCGKMTW  6071
             IL CG   W
Sbjct  35    ILSCG---W  40


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3961  TRLY  3972
             TRLY
Sbjct  125   TRLY  128


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5976  QTLC  5965
             QTLC
Sbjct  221   QTLC  224


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4272  EIRLNI  4289
             E R+NI
Sbjct  384   ELRMNI  389


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2578  LEYCW  2564
             LEY W
Sbjct  910   LEYAW  914


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4433  IQNFRV  4450
             IQ+F V
Sbjct  1038  IQDFQV  1043


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8956  TADIELA  8976
             T DI LA
Sbjct  1079  TVDIALA  1085


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3604  RNHSSTTRS  3630
             R HSS   S
Sbjct  1225  RSHSSSSSS  1233


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +3

Query  4206  IPKVKE**NL  4235
             IPKV    NL
Sbjct  1726  IPKV----NL  1731


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  577   VLYN  566
             VLYN
Sbjct  1911  VLYN  1914


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1492  KERLLS  1509
             KE LLS
Sbjct  2290  KESLLS  2295


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  6205  ENDNGERRDK  6234
             EN+  E R+K
Sbjct  2646  ENNKKESRNK  2655


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7646  TTWMEWDREI  7675
             T W +W  EI
Sbjct  3400  TSWDDWKPEI  3409


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9025  PPRPRLP  9005
             PP P LP
Sbjct  3923  PPSPPLP  3929


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3355  SLSEIMV  3375
             SL E MV
Sbjct  3971  SLPEEMV  3977


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8701  TSLISRTT  8724
             TSL+S  T
Sbjct  4026  TSLVSSST  4033


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 1/14 (7%)
 Frame = -2

Query  6591  DLITTSSSAR-LPF  6553
             DL   SSS   L F
Sbjct  4137  DLTSSSSSSSGLSF  4150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4156  GRLLVGGN  4179
             GRL VG N
Sbjct  4437  GRLSVGSN  4444


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7664  DREI  7675
             DREI
Sbjct  4446  DREI  4449


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3110  MSIGL  3096
             MS+GL
Sbjct  4451  MSVGL  4455


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  567   LYNT  578
             LYNT
Sbjct  4532  LYNT  4535


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3059  MGHNTL  3042
             +GHNT+
Sbjct  4717  LGHNTM  4722


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5430  RLTSW  5416
             RL SW
Sbjct  4934  RLISW  4938


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8933  LSGHVM  8916
             LSG VM
Sbjct  79    LSGKVM  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/21 (23%), Positives = 9/21 (42%), Gaps = 8/21 (38%)
 Frame = +3

Query  4623  VDRMRIRT--------WKSLV  4661
             ++R  + T        W SL+
Sbjct  180   IERVKVKTESQDPTSSWRSLI  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1127  MDNPG  1141
             MD PG
Sbjct  297   MDEPG  301


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3741  STCSFPPI  3718
             ST S PPI
Sbjct  706   STSSRPPI  713


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -1

Query  6547  QLS*YYWPNSMCTLY  6503
             +LS    P+S  TLY
Sbjct  728   ELS----PDSQITLY  738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  677  STASSS  694
            ST SSS
Sbjct  774  STSSSS  779


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6188  TNSSSG  6205
             T SSSG
Sbjct  775   TSSSSG  780


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4241  KELKKII  4261
             KE  KII
Sbjct  1184  KEIPKII  1190


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8136  PLRPRSS  8116
             PLR  SS
Sbjct  1223  PLRSHSS  1229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  202   QVPVRAPL  179
             Q P R PL
Sbjct  1300  QSPLRSPL  1307


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1097  TYPSR  1111
             TYP R
Sbjct  1412  TYPGR  1416


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = +3

Query  942   ETINEEAAEW--DRVHPV  989
             ET  E   EW  D  +PV
Sbjct  1598  ETLTE---EWTLD--QPV  1610


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  559   LDHYI  573
             LD YI
Sbjct  1637  LDRYI  1641


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/12 (41%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -2

Query  3750  TNLSTCSFPPIP  3715
             T+  TC    IP
Sbjct  1837  TDIGTCAITAIP  1848


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  7653  GW----SGTEKLTI  7682
             GW     G E LTI
Sbjct  1889  GWIMFECGLENLTI  1902


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7098  ICPLMG  7081
             IC  MG
Sbjct  2062  ICAVMG  2067


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  558   LRSLYN  575
             LRS YN
Sbjct  2083  LRSKYN  2088


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +2

Query  8960  LTSS------LLQGT  8986
             LT S      LL+GT
Sbjct  2297  LTGSFPSLHNLLEGT  2311


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8221  GIEQAN  8204
             G+E+AN
Sbjct  2422  GVEEAN  2427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1251  LLEFY  1237
             LL FY
Sbjct  2709  LLNFY  2713


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  344   RTHL  333
             RTHL
Sbjct  2785  RTHL  2788


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6203  GRMIM  6217
             GR IM
Sbjct  3533  GRKIM  3537


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1179  ILDIRQ  1196
             I DIR+
Sbjct  3540  IVDIRE  3545


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2855  VNDI  2866
             VNDI
Sbjct  3581  VNDI  3584


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  943   RPSMR  957
             R SMR
Sbjct  3594  RSSMR  3598


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +1

Query  5098  RIDGTSPRRPRAT  5136
             R+D  SP  PR T
Sbjct  3648  RVDAASP-GPRVT  3659


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1998  VDIKL  2012
             VD+KL
Sbjct  3879  VDVKL  3883


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  469   ANRSSSL  449
             A R SSL
Sbjct  3897  ASRGSSL  3903


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = -1

Query  4366  PCTV--------PPNPP  4340
             P TV        PP PP
Sbjct  3929  PSTVQSKTNTLLPPQPP  3945


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  1908  LISSNTVSSA----PV  1873
             L+SS T  SA    PV
Sbjct  4028  LVSSST--SAYSSFPV  4041


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9046  RARHS  9032
             R RHS
Sbjct  4128  RSRHS  4132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1093  LFVIHP  1076
             L+V HP
Sbjct  4159  LYVFHP  4164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +1

Query  1999  WT*SYRYSISR  2031
             W   YR SI R
Sbjct  4271  W---YRRSIAR  4278


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2699  IEELRQHL  2722
             IE   QHL
Sbjct  4300  IEGVSQHL  4307


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7116  IFDEHL  7099
             +F+EH+
Sbjct  4338  VFNEHM  4343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8903  PPSISSR  8923
             P SI SR
Sbjct  4360  PASIRSR  4366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  306   IFGVLTSRRPSP  271
             IF V+ SR   P
Sbjct  4556  IFQVMISRSTTP  4567


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3966  SSCHI  3952
             S CHI
Sbjct  4634  SGCHI  4638


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2764  RTSIP  2778
             RT IP
Sbjct  4961  RTTIP  4965


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = -2

Query  885  NLVGWLL  865
            N V WLL
Sbjct  26   NVV-WLL  31


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5068  GFIFF  5054
             GFI F
Sbjct  102   GFIIF  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5713  QRKIDR  5730
             Q KI+R
Sbjct  177   QSKIER  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5425  QPKTACTN  5448
             QP T C N
Sbjct  219   QPQTLCIN  226


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5243  RYVAL  5229
             RYV L
Sbjct  266   RYVGL  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2856  SMTYR  2870
             SM YR
Sbjct  447   SMQYR  451


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7921  SDPPPN  7938
             SD PP+
Sbjct  507   SDSPPD  512


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7394  WPVPS  7380
             W VPS
Sbjct  651   WTVPS  655


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2310  LHLVLS  2293
             L+L+LS
Sbjct  855   LQLILS  860


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 13/26 (50%)
 Frame = +1

Query  1165  IALPAFWT*DKD-------QRNPLET  1221
             IAL A      D       QR  LET
Sbjct  1082  IALAA------DHHSKHEAQRHFLET  1101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7360  HSASCCSQE  7334
             HS S  S+E
Sbjct  1227  HSSSSSSEE  1235


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4658  SKTPY  4672
             S TPY
Sbjct  1580  SNTPY  1584


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6471  MEQDHV  6488
             M QD V
Sbjct  1710  MKQDNV  1715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7890  LFTIE  7876
             LFT E
Sbjct  1855  LFTLE  1859


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5159  TLELLEE  5179
             TLE L+E
Sbjct  1857  TLEELDE  1863


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2     VSLVRP  19
             VSL RP
Sbjct  2160  VSLHRP  2165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9087  VSLVRP  9104
             VSL RP
Sbjct  2160  VSLHRP  2165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 10/21 (47%)
 Frame = -2

Query  2223  FSISV----------QISTNA  2191
             FSIS           Q ST A
Sbjct  2518  FSISAVVMEKSVCTPQNSTSA  2538


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/33 (30%), Positives = 10/33 (30%), Gaps = 20/33 (60%)
 Frame = +2

Query  7001  SDTITL-----P---CRIKQIINMWQKVGKAMY  7075
             SD IT      P   C        WQ     MY
Sbjct  2687  SDSITVSEQSEPSAEC--------WQN----MY  2707


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4915  ITLTVF  4932
             +TL VF
Sbjct  2773  VTLIVF  2778


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8132  CVPEV  8118
             CV EV
Sbjct  3091  CVAEV  3095


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 5/17 (29%)
 Frame = -1

Query  8404  LILSLTVGH-----PIT  8369
             L L LTV       PIT
Sbjct  3331  LFLQLTVNDLGICLPIT  3347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8674  SRISCLL  8654
             SR+ C+L
Sbjct  4062  SRVECML  4068


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3620  QPDQSES  3640
             QP QS S
Sbjct  4322  QPSQSAS  4328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1673  PWPSLV  1656
             PW  LV
Sbjct  4399  PWETLV  4404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8707  LISRTT  8724
             +ISR T
Sbjct  4560  MISRST  4565


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1835  IKIGGQLKE  1861
             IKIG  L E
Sbjct  4570  IKIGMKLQE  4578


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  895   MVFKSCG  875
             MV K CG
Sbjct  4722  MVTKPCG  4728


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5303  VVAEF  5289
             VV EF
Sbjct  4845  VVTEF  4849


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6081  ICSTM  6067
             IC TM
Sbjct  4853  ICVTM  4857


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6604  REIDR  6590
             REI R
Sbjct  169   REIGR  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4190  FGIPYNPQ  4213
             FG  Y PQ
Sbjct  214   FGNHYQPQ  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1063  RVLVVP  1046
             RV+ VP
Sbjct  258   RVMLVP  263


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8308  SSRYV  8294
             S RYV
Sbjct  264   SPRYV  268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7480  DCELQ  7466
             DC LQ
Sbjct  319   DCKLQ  323


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  4675  YIWCFTKLFH  4646
             Y W F  +FH
Sbjct  519   YTWNFKIMFH  528


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4752  VLLNLF  4735
             VL NL+
Sbjct  812   VLVNLY  817


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  143  GSLVTRVT  120
            GSL   VT
Sbjct  921  GSLTAKVT  928


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8292  RIALQ  8278
             RI LQ
Sbjct  1054  RIGLQ  1058


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  202   QVPVR  188
             QVP R
Sbjct  1221  QVPLR  1225


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  9133  VSQRAPRLRSGLTRE  9089
             V Q  P LRS L R+
Sbjct  1298  VGQ-SP-LRSPLKRQ  1310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -2

Query  48    VSQRAPRLRSGLTRE  4
             V Q  P LRS L R+
Sbjct  1298  VGQ-SP-LRSPLKRQ  1310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6888  RTVLIVE  6908
             RT  IVE
Sbjct  1614  RTTAIVE  1620


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4168  PTGGPNRS  4145
             PT  P RS
Sbjct  1742  PTTAPSRS  1749


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  833   RSDTHV  850
             RS THV
Sbjct  1748  RSVTHV  1753


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  8507  TSSIGSCCI  8481
             T  IG C I
Sbjct  1836  TTDIGTCAI  1844


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4749  VHIPL  4763
             VH PL
Sbjct  2079  VHFPL  2083


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8893  LHSNTS  8876
             L+S+TS
Sbjct  2191  LQSDTS  2196


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1639  GRSGLP  1656
             GR G+P
Sbjct  2278  GRAGMP  2283


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  108   HTLLE  94
             H LLE
Sbjct  2305  HNLLE  2309


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 12/35 (34%), Positives = 12/35 (34%), Gaps = 17/35 (48%)
 Frame = +3

Query  8526  EEEEVGFPVT----PQV---PLRPMTYKAAVDLSH  8609
             EE   GFP       QV   PL          LSH
Sbjct  2424  EEANQGFPAVQLADAQVVFKPL----------LSH  2448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  3087  FCISAI---KS  3064
             F ISA+   KS
Sbjct  2518  FSISAVVMEKS  2528


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6915  FSTVI  6929
             FST I
Sbjct  2578  FSTMI  2582


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5709  KTKKNR  5726
             KT K R
Sbjct  2609  KTRKHR  2614


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 3/4 (75%), Gaps = 0/4 (0%)
 Frame = +1

Query  8452  WKNM  8463
             W NM
Sbjct  2703  WQNM  2706


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3678  RKRS  3689
             RKRS
Sbjct  2761  RKRS  2764


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3032  VLLE  3021
             VLLE
Sbjct  2837  VLLE  2840


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2560  ITSNI  2574
             IT NI
Sbjct  2842  ITPNI  2846


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2685  CPISKS  2668
             C I KS
Sbjct  2869  CSIAKS  2874


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6051  LKFS  6040
             LKFS
Sbjct  2978  LKFS  2981


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  102   LLEALKA  82
             LL  LKA
Sbjct  2993  LLPSLKA  2999


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4943  YKKGLIRTH  4969
             YK G  R H
Sbjct  3001  YKMGRMRSH  3009


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6967  STIKPS  6950
             STI PS
Sbjct  3039  STIPPS  3044


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6095  ISLWDQ  6112
             I LW++
Sbjct  3135  IPLWNE  3140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5419  LDASRALV  5396
             LD   ALV
Sbjct  3358  LDTGSALV  3365


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2154  FGPSIP  2137
             F P IP
Sbjct  3705  FSPGIP  3710


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5909  EATTTL  5926
             E TT L
Sbjct  4023  ESTTSL  4028


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8437  APTLSAAGSA  8408
             A TLS  G A
Sbjct  4093  AETLSPGGNA  4102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3568  RSKHS  3582
             RS HS
Sbjct  4128  RSRHS  4132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8630  TGRANSL  8650
             TGR +SL
Sbjct  4195  TGRKDSL  4201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4890  LADQLIHL  4913
             L DQ I L
Sbjct  4282  LGDQTINL  4289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5853  QIINIP  5836
             Q IN P
Sbjct  4285  QTINLP  4290


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5409  EASRK  5423
             E SRK
Sbjct  4310  ESSRK  4314


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2843  DSWTVN  2860
             D W VN
Sbjct  4526  DEWKVN  4531


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4281  LNILR  4295
             LN LR
Sbjct  4770  LNLLR  4774


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5057  KDKATF  5074
             K+KA F
Sbjct  4876  KEKAIF  4881


>sp|Q92835.2|SHIP1_HUMAN  RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 
1; AltName: Full=SH2 domain-containing inositol-5'-phosphatase 
1; Short=SH2 domain-containing inositol phosphatase 
1; Short=SHIP-1; AltName: Full=Inositol polyphosphate-5-phosphatase 
of 145 kDa; Short=SIP-145; AltName: Full=p150Ship; 
Short=hp51CN
Length=1189

 GENE ID: 3635 INPP5D | inositol polyphosphate-5-phosphatase, 145kDa
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 11/15 (73%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -1

Query  9031  PVP-PRPRLPGKSPA  8990
             P P PRP LP KSPA
Sbjct  1135  PTPTPRPPLPVKSPA  1149


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = -1

Query  1528  SLPQLKHLTIFL  1493
             SLP+LK LT  L
Sbjct  205   SLPHLKKLTTLL  216


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3483  DKKLSP  3500
             DKKLSP
Sbjct  567   DKKLSP  572


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  9121  APRLRS  9104
             APRLRS
Sbjct  1080  APRLRS  1085


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  36    APRLRS  19
             APRLRS
Sbjct  1080  APRLRS  1085


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1263  KLARLLEFY  1237
             KL  L EFY
Sbjct  78    KLDQLIEFY  86


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 15/29 (51%)
 Frame = +2

Query  2177  EEKIKALV-EICTEMEKEGKISKIGPENP  2260
             E+K+KAL  E              GPE P
Sbjct  276   EDKVKALLHE--------------GPESP  290


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3607  NHSSTTRSK  3633
             NH   TRSK
Sbjct  6     NHGNITRSK  14


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = +3

Query  3816  NITVIGEQ--------WLVIL  3854
             +I VIG Q        WL IL
Sbjct  445   DIYVIGTQEDPLSEKEWLEIL  465


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5973  FGPHMP  5990
             FGP MP
Sbjct  921   FGPPMP  926


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2020  SISRTY  2037
             SISR Y
Sbjct  35    SISRAY  40


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +2

Query  4283  EHLKTAVQ  4306
             EHLK A+Q
Sbjct  179   EHLK-AIQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  1958  IKVRQY------DQILIE  1993
             IK  QY      DQ L E
Sbjct  606   IKQQQYADLLSHDQLLTE  623


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5373  LLSSVE  5356
             LLSS+E
Sbjct  271   LLSSIE  276


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8656  EDKISLIC  8679
             E+ IS IC
Sbjct  499   ENRISHIC  506


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1658  QGKARE  1675
             QGK RE
Sbjct  857   QGKTRE  862


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434  ITHIQY  2417
             +TH QY
Sbjct  94    VTHLQY  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3352  PSLSE  3366
             PSLSE
Sbjct  158   PSLSE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7678  QLHKLNTLL  7704
             +L KL TLL
Sbjct  208   HLKKLTTLL  216


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6602  TDNAKT  6619
             TDN KT
Sbjct  507   TDNVKT  512


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = -3

Query  230  RAPLVSLSLSGPCSG  186
            RAP        PCSG
Sbjct  898  RAP--------PCSG  904


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = +1

Query  865   KEPPHKI*TPC  897
             KEPP     PC
Sbjct  1045  KEPP-----PC  1050


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6293  FFYKLD  6310
             FF KLD
Sbjct  75    FFTKLD  80


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2447  VPLDED  2464
             VPL+E+
Sbjct  101   VPLEEE  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4855  LHSMET  4838
             L+SM+T
Sbjct  168   LQSMDT  173


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9022  PRPRLPG  9002
             PRP  PG
Sbjct  248   PRPQVPG  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3632  SESELV  3649
             SE ELV
Sbjct  772   SEGELV  777


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5528  SGDSDE  5545
             S DSDE
Sbjct  808   SSDSDE  813


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             R K EEL
Sbjct  12    RSKAEEL  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +2

Query  1667  ARE--FSSEQTRA  1699
             A E  FS E  RA
Sbjct  140   AKEVPFSNENPRA  152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6363  PQSLHRP  6383
             P+S HRP
Sbjct  287   PESPHRP  293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +2

Query  5165  ELLEELKN  5188
             +LL+++KN
Sbjct  386   QLLQQMKN  393


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2594  FLSCY  2580
             FL CY
Sbjct  733   FLRCY  737


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  1976  DQ-ILIEI  1996
             DQ ILI I
Sbjct  799   DQHILISI  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8796  KIEEANKGE  8822
             K +EA+ GE
Sbjct  1064  KAQEADRGE  1072


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8968  ELATRDFPL  8994
             EL  R+ PL
Sbjct  125   ELPPRNIPL  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  731  PYSAEHPGANGTS  769
            P+S E P A  TS
Sbjct  144  PFSNENPRATETS  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7633  LFQR  7622
             LFQR
Sbjct  164   LFQR  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = +2

Query  3338  EFVNT-----PPLVKL  3370
             EFV T     P L KL
Sbjct  197   EFVKTGSSSLPHLKKL  212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8071  LPPLERL  8091
             LP LE L
Sbjct  228   LPSLESL  234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6281  KEYAF  6295
             KEY F
Sbjct  371   KEYVF  375


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  890   HHAKH  904
             HH KH
Sbjct  1169  HHGKH  1173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6764  NISRAK  6781
             NI R K
Sbjct  9     NITRSK  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3144  KQENM  3158
             K ENM
Sbjct  87    KKENM  91


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 7/23 (30%)
 Frame = -2

Query  5457  TIAIGTSSF-------RLTSWML  5410
             TI IGT            TSW L
Sbjct  405   TIFIGTWNMGNAPPPKKITSWFL  427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5022  VEILPCY  5002
             +E L CY
Sbjct  731   IEFLRCY  737


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  82   CLECF  96
            CLE F
Sbjct  756  CLESF  760


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9167  CLECF  9181
             CLE F
Sbjct  756   CLESF  760


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4631  PVYLPHNHH  4605
             P+Y P  HH
Sbjct  832   PIYTPLTHH  840


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = -1

Query  289  QSP---PLASCR  263
            Q P   PL  CR
Sbjct  946  QPPKDSPLGPCR  957


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -1

Query  5836  KEHGAPSPPPSPQ  5798
             KE     PPP P+
Sbjct  1045  KE-----PPPCPE  1052


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  2492  PS---INNETP  2515
             PS   IN +TP
Sbjct  1124  PSRSEINQQTP  1134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7626  WNRFGITR  7649
             WN   ITR
Sbjct  5     WNHGNITR  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6687  ESVSR  6701
             ES+SR
Sbjct  34    ESISR  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6672  TIQEKESVS  6698
             T+Q  E VS
Sbjct  64    TVQASEGVS  72


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 19/38 (50%)
 Frame = +1

Query  5719  KIDRLID-----------------RLIERAEDSGNESE  5781
             K D LI+                  L E  ED G++ E
Sbjct  78    KLDQLIEFYKKENMGLVTHLQYPVPLEE--EDTGDDPE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2603  PFRKQNP  2623
             PF  +NP
Sbjct  144   PFSNENP  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  691  QLTQD  705
            QL QD
Sbjct  191  QLAQD  195


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4032  QKLFQQ  4049
             Q LF Q
Sbjct  235   QRLFDQ  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1025  FSHLAW  1008
             F HL W
Sbjct  579   FTHLFW  584


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  4841  LHRMEEKEI  4867
             LH  EE EI
Sbjct  631   LH-FEEEEI  638


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 8/24 (33%)
 Frame = +1

Query  8956  TADIELATRD----FPLGTFQGGV  9015
             T DI   T D    F   TF+ GV
Sbjct  693   TSDI--MTSDHSPVFA--TFEAGV  712


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2270  PVFA  2281
             PVFA
Sbjct  703   PVFA  706


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1094  IICHPSYL  1071
             II  P YL
Sbjct  790   IISDPEYL  797


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1264  EACSALR  1244
             E C ALR
Sbjct  817   EGCIALR  823


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1589  LSTFP  1575
             LS FP
Sbjct  1025  LSSFP  1029


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  256   FSKPSP  239
             F KP P
Sbjct  1028  FPKPAP  1033


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5546  ELIRT  5560
             E IRT
Sbjct  223   EVIRT  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  856  AENMGI  839
            AE +GI
Sbjct  305  AESLGI  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  1651  LPTREGQGI  1677
             LPT E + I
Sbjct  594   LPTWEAETI  602


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7633  DLESHD  7650
             DL SHD
Sbjct  613   DLLSHD  618


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7682  YTSLIH  7699
             YT L H
Sbjct  834   YTPLTH  839


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             P PL V
Sbjct  924   PMPLHV  929


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7183  SRSEDLG  7163
             SR  DLG
Sbjct  991   SRPSDLG  997


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  574   LYNDLSS  554
             LY  LSS
Sbjct  1021  LYGSLSS  1027


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8030  PRIRS  8016
             PR RS
Sbjct  1081  PRLRS  1085


>ref|NP_004644.2|  lysine-specific demethylase 5D isoform 2 [Homo sapiens]
Length=1539

 GENE ID: 8284 KDM5D | lysine (K)-specific demethylase 5D [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 15/40 (37%)
 Frame = +2

Query  2615  QNPDIVIYQY--MDDLY----VGSDLEIGQHRTKIEELRQ  2716
             QN D    +Y  +DDL     VG DL +G      EELRQ
Sbjct  1027  QNGD----HYPCLDDLEGLVAVGRDLPVG-----LEELRQ  1057


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 11/22 (50%)
 Frame = -1

Query  6757  CLSHISYFSYCN---KCSPWSS  6701
             CLSHI      N   KCS  SS
Sbjct  720   CLSHI------NDLCKCS--SS  733


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  2354  FWEVQ---LGIP  2380
             FWE+Q   L IP
Sbjct  92    FWEIQGSSLKIP  103


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8948  LQELLT  8965
             LQELLT
Sbjct  960   LQELLT  965


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  7914  NGE-YPCL  7894
             NG+ YPCL
Sbjct  1028  NGDHYPCL  1035


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LL+RG+Q
Sbjct  891   LLERGQQ  897


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  991   MQGLL  1005
             MQGLL
Sbjct  937   MQGLL  941


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2705  ELRQHL  2722
             ELRQ+L
Sbjct  1297  ELRQQL  1302


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  1680  LQSRPEPTAPPEE  1718
             LQ  PEPT   EE
Sbjct  216   LQPDPEPT---EE  225


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4482  KDQQSSSGKV  4511
             KD+QS  G V
Sbjct  272   KDEQSGGGNV  281


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQA QE
Sbjct  376   EQATQE  381


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  552  EELRSL  569
            EELR L
Sbjct  782  EELRAL  787


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5276  EAIIR  5290
             EAIIR
Sbjct  990   EAIIR  994


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -2

Query  5007  CYVLLDIHT*G*LC  4966
             CY LL++     LC
Sbjct  1082  CYTLLEV-----LC  1090


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7715  ILQLR  7701
             ILQLR
Sbjct  1148  ILQLR  1152


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  409   PPGLNRI  389
             PP L+RI
Sbjct  1412  PPDLDRI  1418


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8027  RIRSLIE  8007
             RIR L E
Sbjct  1417  RIRTLLE  1423


 Score = 17.2 bits (33),  Expect(2) =  6591
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2288  SLWQILE  2268
             S WQ L+
Sbjct  1402  SIWQLLQ  1408


 Score = 16.8 bits (32),  Expect(2) =  6591
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2356  EVLSSL  2339
             E LSSL
Sbjct  1359  ELLSSL  1364


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  5991  QACVAQTL  5968
             +AC+AQ L
Sbjct  813   EACIAQVL  820


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -1

Query  1540  AVCPSL-P--QL  1514
             A CPSL P  QL
Sbjct  1520  AACPSLMPLLQL  1531


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5165  ELLEELKN  5188
             ELL+ LKN
Sbjct  800   ELLQRLKN  807


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7681  LHKLNTLLN  7707
             LH L TL+N
Sbjct  554   LHQLVTLMN  562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4947  RKALL  4961
             RKALL
Sbjct  671   RKALL  675


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  8136  PL-----RPRSSTIL  8107
             PL     RPR  TIL
Sbjct  1232  PLCMRSRRPRLETIL  1246


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2663  GSDLE  2677
             GSDLE
Sbjct  1355  GSDLE  1359


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  447   SRELER  464
             SR LER
Sbjct  1436  SRALER  1441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4201  LQSPKSRSS  4227
             LQS   RSS
Sbjct  1462  LQSKRARSS  1470


 Score = 15.9 bits (30),  Expect(2) = 15890
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  443  PYYMF  429
            PY MF
Sbjct  163  PYEMF  167


 Score = 15.9 bits (30),  Expect(2) = 15890
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  311  SKFLAYS  291
            SKF  YS
Sbjct  204  SKFSSYS  210


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1350  PAATLE  1367
             P ATLE
Sbjct  985   PPATLE  990


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  105   TLLEAL  88
             TLLE L
Sbjct  1084  TLLEVL  1089


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4317  SSTILKE  4337
             SST LK+
Sbjct  282   SSTLLKQ  288


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7560  PQIPR  7546
             P+IPR
Sbjct  349   PEIPR  353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3062  LMGHNTL  3042
             LM  NTL
Sbjct  560   LMNPNTL  566


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -2

Query  4422  CF-C-NSLVCMS  4393
             C+ C + LVC+S
Sbjct  711   CYDCPDGLVCLS  722


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6421  LCPGWF  6438
             LC  WF
Sbjct  1191  LCQDWF  1196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8476  VAIQQLP  8496
             VA Q LP
Sbjct  1250  VALQRLP  1256


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  972   PILQLP  955
             P+L+LP
Sbjct  1371  PVLELP  1376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  2865  MSLTVQLSFS  2836
             M L  QLS+S
Sbjct  1526  MPL-LQLSYS  1534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  940  KRPSMRKLQ  966
            K P + KLQ
Sbjct  229  KHPELKKLQ  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4394  DIQTKE  4411
             DI+ KE
Sbjct  433   DIHSKE  438


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  202  ESERE  216
            E ERE
Sbjct  681  EAERE  685


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8527  RRRR  8538
             RRRR
Sbjct  1441  RRRR  1444


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3713  CVLVPMPDRP  3684
             C L P+P+ P
Sbjct  343   CLLPPLPEIP  352


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1310  ILDQQGFCH  1284
             +LDQ   CH
Sbjct  471   VLDQSVLCH  479


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7623  DLLLQL  7606
             DLL QL
Sbjct  552   DLLHQL  557


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +3

Query  8193  RIVL-----LACSMPQ  8225
             R+ L     L C M Q
Sbjct  841   RVLLEQMGSLPCAMHQ  856


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1416  RVLAEAM  1436
             RVL E M
Sbjct  841   RVLLEQM  847


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  214  ETRGALST  237
            E R AL T
Sbjct  873  EAREALAT  880


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5283  MASTP  5269
             MAS P
Sbjct  1167  MASSP  1171


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7015  GDCVTS  6998
             GD VTS
Sbjct  1341  GDSVTS  1346


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1352  SGYTRR  1369
             S Y RR
Sbjct  207   SSYSRR  212


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  605  KDRDK  619
            KD DK
Sbjct  253  KDKDK  257


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7681  LHKL  7692
             LHKL
Sbjct  750   LHKL  753


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  2230  ENFKNWA  2250
             E F  WA
Sbjct  758   ESFDTWA  764


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7598  KAQQW  7584
             KAQ W
Sbjct  1015  KAQAW  1019


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8631  LEGLI  8645
             LEGL+
Sbjct  1038  LEGLV  1042


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1944  ELEVL  1958
             EL+VL
Sbjct  1059  ELQVL  1063


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8984  SLVASS  8967
             SL ASS
Sbjct  1165  SLMASS  1170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  4818  DW-HLGQGVSI  4847
             DW H GQ VS+
Sbjct  1194  DWFH-GQCVSV  1203


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  294   LTSRRPS  274
             LTS  PS
Sbjct  1207  LTSPKPS  1213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  641   QDRGR  655
             QDR R
Sbjct  1276  QDRAR  1280


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             +AQ RV
Sbjct  76    EAQTRV  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8802  LSYLAQ  8785
             L YL Q
Sbjct  83    LNYLDQ  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8715  QNYTPGP  8735
             Q Y PGP
Sbjct  237   QIYGPGP  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2106  GLMGK  2092
             GLM K
Sbjct  249   GLMAK  253


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5876  VTVYYG  5893
             VTV YG
Sbjct  426   VTVEYG  431


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6484  WSCSI  6470
             WS SI
Sbjct  509   WSYSI  513


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2362  FPEVL  2348
             FPE L
Sbjct  644   FPETL  648


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7171  DLGLIVAI  7148
             DL L VA+
Sbjct  649   DLNLAVAV  656


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6041  ENFNMWKN  6064
             E F+ W N
Sbjct  758   ESFDTWAN  765


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1576  GNVERKDT  1599
             G V R DT
Sbjct  825   GQVARMDT  832


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7878  ESTAKTILK  7852
             E   KT LK
Sbjct  1070  EKASKTFLK  1078


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7493  QLQA  7504
             QLQA
Sbjct  1301  QLQA  1304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  7165  RDLQTWRRR  7191
             R L+  RRR
Sbjct  1437  RALERRRRR  1445


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  972   PILQL  958
             P LQL
Sbjct  1527  PLLQL  1531


>pdb|1YJD|C  Chain C, Crystal Structure Of Human Cd28 In Complex With The 
Fab Fragment Of A Mitogenic Antibody (5.11a1)
Length=140


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -1

Query  5485  KLGNESNTFY  5456
             KLGNES TFY
Sbjct  73    KLGNESVTFY  82


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7070  MYAPP  7084
             MY PP
Sbjct  101   MYPPP  105


 Score = 17.2 bits (33),  Expect(2) = 15287
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3545  DKLLVTQS  3522
             +K LV QS
Sbjct  3     NKILVKQS  10


 Score = 16.8 bits (32),  Expect(2) = 15287
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3480  PLLVTY  3463
             P+LV Y
Sbjct  11    PMLVAY  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  338  HLSPSSL  318
            HL PS L
Sbjct  123  HLCPSPL  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6896  FNCGG  6910
             FNC G
Sbjct  68    FNCDG  72


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  4877  LCAISLFP  4854
             LC   LFP
Sbjct  124   LCPSPLFP  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3258  NLNCPY  3275
             NL C Y
Sbjct  21    NLSCKY  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -2

Query  6645  TDVFSCTIMVL  6613
             TD++ C I V+
Sbjct  91    TDIYFCKIEVM  101


>ref|NP_877436.1|  family with sequence similarity 19 (chemokine (C-C motif)-like), 
member A3 isoform 1 [Homo sapiens]
Length=133

 GENE ID: 284467 FAM19A3 | family with sequence similarity 19 (chemokine (C-C
motif)-like), member A3 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 5/19 (26%)
 Frame = -2

Query  948  WSLLTFAWLLDVPPLCLAW  892
            WS  T  WLL    LCLAW
Sbjct  9    WS--TGGWLL---ALCLAW  22


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2808  LSGWS  2794
             LSGWS
Sbjct  115   LSGWS  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8133  LRPRSSTILV  8104
             L P   T+LV
Sbjct  32    LQPPTATVLV  41


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1287  TETLLVQ  1307
             T T LVQ
Sbjct  36    TATVLVQ  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4900  WSASSG  4883
             WS SSG
Sbjct  118   WSCSSG  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6355  TCQLIA  6338
             TC+ IA
Sbjct  45    TCEVIA  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1455  ATIMMQR  1475
             A I +QR
Sbjct  89    ASIVLQR  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5850  SVVLQ  5864
             S+VLQ
Sbjct  90    SIVLQ  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3619  TTRSK  3633
             TTR K
Sbjct  79    TTRAK  83


>ref|NP_006130.1|  T-cell-specific surface glycoprotein CD28 precursor [Homo sapiens]
Length=220

 GENE ID: 940 CD28 | CD28 molecule [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -1

Query  5485  KLGNESNTFY  5456
             KLGNES TFY
Sbjct  89    KLGNESVTFY  98


 Score = 19.7 bits (39),  Expect(2) =  3527
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6800  VLKCYSIL  6777
             VL CYS L
Sbjct  162   VLACYSLL  169


 Score = 16.8 bits (32),  Expect(2) =  3527
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6767  CYNVLV  6750
             CY  LV
Sbjct  165   CYSLLV  170


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7339  GSSRKHY  7359
             G  RKHY
Sbjct  200   GPTRKHY  206


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +2

Query  5435  LLVPIAIVKSVAFI  5476
             LLV       VAFI
Sbjct  168   LLV------TVAFI  175


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  294  LTSRRPSP  271
            +T RRP P
Sbjct  194  MTPRRPGP  201


 Score = 17.2 bits (33),  Expect(2) = 13132
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3545  DKLLVTQS  3522
             +K LV QS
Sbjct  19    NKILVKQS  26


 Score = 16.8 bits (32),  Expect(2) = 13132
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3480  PLLVTY  3463
             P+LV Y
Sbjct  27    PMLVAY  32


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7070  MYAPP  7084
             MY PP
Sbjct  117   MYPPP  121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -3

Query  4877  LCAISLFP----PF  4848
             LC   LFP    PF
Sbjct  140   LCPSPLFPGPSKPF  153


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  863  RRSHPTRFKH  892
            RR  PTR KH
Sbjct  197  RRPGPTR-KH  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  338  HLSPSSL  318
            HL PS L
Sbjct  139  HLCPSPL  145


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6001  RPQPTR  6018
             RP PTR
Sbjct  198   RPGPTR  203


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5915  LLPSTQV  5895
             L PS QV
Sbjct  10    LFPSIQV  16


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6896  FNCGG  6910
             FNC G
Sbjct  84    FNCDG  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9069  AFCLYWV  9089
             AF  +WV
Sbjct  173   AFIIFWV  179


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3258  NLNCPY  3275
             NL C Y
Sbjct  37    NLSCKY  42


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -2

Query  6645  TDVFSCTIMVL  6613
             TD++ C I V+
Sbjct  107   TDIYFCKIEVM  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  4472  PLWKGPAKLLW  4504
             PL  GP K  W
Sbjct  144   PLFPGPSKPFW  154


>ref|NP_001004440.1|  family with sequence similarity 19 (chemokine (C-C motif)-like), 
member A3 isoform 2 [Homo sapiens]
Length=169

 GENE ID: 284467 FAM19A3 | family with sequence similarity 19 (chemokine (C-C
motif)-like), member A3 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 5/19 (26%)
 Frame = -2

Query  948  WSLLTFAWLLDVPPLCLAW  892
            WS  T  WLL    LCLAW
Sbjct  9    WS--TGGWLL---ALCLAW  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8921  RGPRAA  8938
             R PRAA
Sbjct  99    RDPRAA  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7539  NSSWG  7553
             +SSWG
Sbjct  156   DSSWG  160


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8133  LRPRSSTILV  8104
             L P   T+LV
Sbjct  32    LQPPTATVLV  41


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1287  TETLLVQ  1307
             T T LVQ
Sbjct  36    TATVLVQ  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 8/19 (42%)
 Frame = -2

Query  4833  DPNASLFLLYADPNMLLLP  4777
             DP A L         LLLP
Sbjct  100   DPRAAL--------RLLLP  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6355  TCQLIA  6338
             TC+ IA
Sbjct  45    TCEVIA  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4813  SPVCR  4799
             SP CR
Sbjct  124   SPACR  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3422  DGAANRETK  3448
             DGAA  +TK
Sbjct  140   DGAAAVDTK  148


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3619  TTRSK  3633
             TTR K
Sbjct  79    TTRAK  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6865  RRGPR  6879
             RR PR
Sbjct  98    RRDPR  102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7560  PQIPRSC  7540
             PQ P SC
Sbjct  110   PQPPSSC  116


>ref|NP_671714.1|  A-kinase anchor protein 9 isoform 3 [Homo sapiens]
Length=3899

 GENE ID: 10142 AKAP9 | A kinase (PRKA) anchor protein (yotiao) 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +2

Query  2669  DLEIGQHRTKIEELRQHL  2722
             DLEI +HR  IE L   L
Sbjct  643   DLEI-EHRINIEKLKDNL  659


 Score = 22.3 bits (45),  Expect(2) =   185
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 9/29 (31%)
 Frame = +2

Query  7388  QARQ-LLSGIVQQQNNLLRAIEAQQHLLQ  7471
             QA Q  L    QQQ       E Q HLL+
Sbjct  265   QAKQQILT--HQQQ------LEEQDHLLE  285


 Score = 18.5 bits (36),  Expect(2) =   185
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7246  TIRSSTH  7266
             T R STH
Sbjct  250   TLRNSTH  256


 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7040  INMWQKV  7060
             INMW KV
Sbjct  1808  INMWSKV  1814


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -3

Query  2795  VHNPSKGMEVLS  2760
             VHN   GM+VLS
Sbjct  2942  VHN--EGMQVLS  2951


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  3056  PSKDLIAEIQKQ  3091
             PS DL  E QKQ
Sbjct  3332  PSEDLLKELQKQ  3343


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4804  IQEKET  4821
             IQEKET
Sbjct  324   IQEKET  329


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1021  ENQGEV  1038
             ENQGEV
Sbjct  1690  ENQGEV  1695


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4406  KELQKQ  4423
             KELQKQ
Sbjct  3338  KELQKQ  3343


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8108  RIVELL  8125
             RIVELL
Sbjct  3350  RIVELL  3355


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             Q  ELQK+I
Sbjct  720   QINELQKEI  728


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3226  CGYFLHCLC  3200
             C YFL+ LC
Sbjct  1199  CSYFLQTLC  1207


 Score = 20.2 bits (40),  Expect(2) =  1250
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 15/29 (51%)
 Frame = +2

Query  2669  DLEIGQHRTKIEE-----------LRQHL  2722
             DLE     TK EE           L Q+L
Sbjct  1330  DLE----KTKLEEQVQELESLISSLQQQL  1354


 Score = 16.8 bits (32),  Expect(2) =  1250
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2632  YLSIH  2646
             +LSIH
Sbjct  1304  FLSIH  1308


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +3

Query  3705  QH-----TKELEEM  3731
             QH       ELEEM
Sbjct  168   QHEIEELNRELEEM  181


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             EEKIK L
Sbjct  1155  EEKIKEL  1161


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 33/76 (43%)
 Frame = +3

Query  780   PRT-LNAWVKVVEE----------KAFS-----PEVIPMFSALSEGATPQDLNTMLNTVG  911
             PR   N W KV EE            F      PE         E     +L  MLN + 
Sbjct  1804  PRNDINMWSKVTEEGTELSQRLVRSGFAGTEIDPE--------NE-----EL--MLN-IS  1847

Query  912   GH-QAAMQMLKETINE  956
                QAA + L E I E
Sbjct  1848  SRLQAAVEKLLEAISE  1863


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +2

Query  5150  NEWTLELLEELKNEAVRHF  5206
             NE   E LE++  E VR++
Sbjct  1583  NE---EQLEDMRQELVRQY  1598


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +2

Query  4397  IQTKE-----LQKQITKIQ  4438
             IQ KE     L  Q+TK Q
Sbjct  2279  IQEKEVEIDQLNEQVTKLQ  2297


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6675  IQEKESV  6695
             IQEKE +
Sbjct  324   IQEKETI  330


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             LSQ QIG
Sbjct  1493  LSQDQIG  1499


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 5/19 (26%)
 Frame = +2

Query  4232  SMNKELKKIIGQVRDQ-AE  4285
             S+ K+L     QVRD+ AE
Sbjct  2720  SLQKDL----SQVRDHLAE  2734


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -2

Query  8913  MLGG---CQTSTLTLL  8875
             +LGG   C+  TL LL
Sbjct  3717  LLGGFQECEDATLALL  3732


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6617  TIIVQLNT  6640
             TII +LNT
Sbjct  329   TIIEELNT  336


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3474  IEEDKK  3491
             IEE+KK
Sbjct  339   IEEEKK  344


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  5165  ELLEELKNEA  5194
             EL  ELK EA
Sbjct  584   EL--ELKHEA  591


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4804  IQEKETGI  4827
             IQEKE  I
Sbjct  2279  IQEKEVEI  2286


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6398  FEPIPI  6415
             FEP PI
Sbjct  2759  FEPLPI  2764


 Score = 19.3 bits (38),  Expect(2) =  3836
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 11/26 (42%)
 Frame = +3

Query  4272  EIRLNILRQQYKWQYSSTILKEKGGL  4349
             EI   ILRQ+          KEKG L
Sbjct  727   EI--EILRQEE---------KEKGTL  741


 Score = 18.5 bits (36),  Expect(2) =  3836
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             EL+EM
Sbjct  436   ELDEM  440


 Score = 15.9 bits (30),  Expect(2) =  3836
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3587  DSQYALGIIQ  3616
             DSQ+   I+Q
Sbjct  411   DSQFETDIVQ  420


 Score = 15.1 bits (28),  Expect(2) =  3836
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4465  QKSTLE  4482
             +K TLE
Sbjct  737   EKGTLE  742


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 10/27 (37%)
 Frame = +2

Query  2177  EEKIKALVEICTEMEKEGKISKIGPEN  2257
             +EKIK       EME + K+     EN
Sbjct  302   QEKIKV-----YEMEQDKKV-----EN  318


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4866  YSTQVD  4883
             YST+VD
Sbjct  1124  YSTHVD  1129


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  6463  DVQWNRTMY  6489
             D Q  RTMY
Sbjct  1395  DAQ--RTMY  1401


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5767  GNESEGEI  5790
             GNE +GE+
Sbjct  1688  GNENQGEV  1695


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +1

Query  8443  LETWKNMEQSQVAIQQLPMLL  8505
             LE  KN E     +QQL M L
Sbjct  2211  LEN-KNEE-----VQQLHMQL  2225


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = +2

Query  6041  ENFNMWKNDMVEQMH  6085
             EN    KN+ V+Q+H
Sbjct  2212  EN----KNEEVQQLH  2222


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6675  IQEKE  6689
             IQEKE
Sbjct  2279  IQEKE  2283


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  804   KVVEEK  821
             KV+EEK
Sbjct  2307  KVIEEK  2312


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  804   KVVEEK  821
             K+VEEK
Sbjct  2537  KIVEEK  2542


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 4/21 (19%)
 Frame = +2

Query  3638  SELVNQIIEQ---LI-KKEKV  3688
             SEL  Q++E    LI  KE V
Sbjct  2601  SELESQVVEMHTSLILEKEQV  2621


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7174  EDLGLI  7157
             E+LGLI
Sbjct  514   EELGLI  519


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +2

Query  6821  EQFGNNKTIIFKQS  6862
             E F  +KT I  QS
Sbjct  1551  EMFSKDKTFIVRQS  1564


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3058  IKRLN  3072
             IKRLN
Sbjct  1630  IKRLN  1634


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5308  QQLLQ  5294
             QQLLQ
Sbjct  1992  QQLLQ  1996


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6675  IQEKESVSR  6701
             IQ KES  R
Sbjct  2227  IQKKESTTR  2235


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = +1

Query  202   ESERETRGALSTQD  243
             ES+     A+STQD
Sbjct  2259  ESD-----AMSTQD  2267


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 12/24 (50%)
 Frame = +2

Query  3194  QLT----------EAVQKITTESI  3235
             QLT          E V+KI  +SI
Sbjct  2417  QLTQELFSLKRERESVEKI--QSI  2438


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8146  PQILV  8160
             PQILV
Sbjct  2787  PQILV  2791


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  543   SEGMVVA  523
             SE MVVA
Sbjct  3148  SEKMVVA  3154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  1284  MTETLLVQNA  1313
             +TE LL QNA
Sbjct  3576  LTERLLRQNA  3585


 Score = 18.0 bits (35),  Expect(2) =  6428
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             ELQ QI
Sbjct  361   ELQEQI  366


 Score = 15.1 bits (28),  Expect(2) =  6428
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4523  VIQDNSDIK  4549
             ++Q N +IK
Sbjct  366   IVQKNQEIK  374


 Score = 18.0 bits (35),  Expect(2) =  6429
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5807  ISTSAD  5790
             IST AD
Sbjct  107   ISTTAD  112


 Score = 15.1 bits (28),  Expect(2) =  6429
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5868  FSVALQ  5851
             FSV L+
Sbjct  99    FSVELE  104


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1535  HSQKLQ  1552
             +SQKLQ
Sbjct  234   QSQKLQ  239


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +3

Query  8787  EPDK-IEEANKGE  8822
             E DK +E  NK E
Sbjct  311   EQDKKVENSNKEE  323


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 3/13 (23%)
 Frame = +2

Query  5162  LELLE-ELKNEAV  5197
             LE+LE E KN AV
Sbjct  600   LEMLEKE-KN-AV  610


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4607  HLPSV  4593
             HLPSV
Sbjct  1074  HLPSV  1078


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4406  KELQK  4420
             KELQK
Sbjct  1159  KELQK  1163


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 11/27 (40%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEWTLELLEELK  5185
             ME   EDQ    E       +L EE K
Sbjct  1616  MERQREDQ----E-------QLQEEIK  1631


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/29 (31%), Positives = 11/29 (37%), Gaps = 13/29 (44%)
 Frame = +3

Query  7617  INLWNRFGIT-----------RPGWSGTE  7670
             IN+W    +T           R G  GTE
Sbjct  1808  INMWSK--VTEEGTELSQRLVRSGFAGTE  1834


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4547  KVVPR  4561
             KVVPR
Sbjct  2095  KVVPR  2099


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2057  RNLLTQIGC  2083
             R+L TQI C
Sbjct  2317  RDLETQIEC  2325


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1872  IQEQMIQY  1895
             IQEQ ++Y
Sbjct  3060  IQEQGVEY  3067


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6548  LLNGSLAEEE  6577
             LLN  LA E+
Sbjct  3197  LLNDTLASEQ  3206


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  235   SRELLW  218
             SREL W
Sbjct  3209  SRELQW  3214


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  3191  KQL-TEAVQKITTES  3232
             KQL  E  QKI  ES
Sbjct  3259  KQLLNESQQKI--ES  3271


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2325  SENLIREL  2348
             SE+L  EL
Sbjct  3333  SEDLLKEL  3340


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4175  GIKQEF  4192
             GI QEF
Sbjct  3430  GIMQEF  3435


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1359  TLEEMM  1376
             TLE+M+
Sbjct  786   TLEDML  791


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3203  EAVQKITTE  3229
             E V+K TTE
Sbjct  932   EVVEKDTTE  940


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6074  EQMHEDI  6094
             EQ++E+I
Sbjct  1624  EQLQEEI  1630


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4639  LEHGKV  4656
             LEH KV
Sbjct  1868  LEHAKV  1873


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = +2

Query  8720  LH--TRARGQISTDL  8758
             LH   RAR Q   +L
Sbjct  1903  LHEESRAREQLAVEL  1917


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +2

Query  6560  SLAEE--------EVVI  6586
             SL EE        +VVI
Sbjct  2368  SLSEEADSLKHQLDVVI  2384


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  924   AMQMLKE  944
             A Q+LKE
Sbjct  2852  AVQLLKE  2858


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5411  SIQEVS  5428
             SIQ+VS
Sbjct  2964  SIQQVS  2969


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7202  NWRSEL  7219
             +WR EL
Sbjct  3013  DWRGEL  3018


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6449  LESQNQ  6432
             LESQ Q
Sbjct  3241  LESQKQ  3246


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2749  QKTSER  2766
             QK SER
Sbjct  3523  QKASER  3528


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1062  LQEQIGW  1082
             L+EQI W
Sbjct  3608  LEEQIRW  3614


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1733  GRDNNS  1750
             GRDN S
Sbjct  3621  GRDNSS  3626


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7907  SPLSFQ  7924
             SPL FQ
Sbjct  3834  SPLPFQ  3839


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3994  PGSSSCSQ  4017
             PGS  CSQ
Sbjct  3851  PGSLACSQ  3858


 Score = 16.8 bits (32),  Expect(2) = 10492
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8928  RELH  8939
             RELH
Sbjct  3312  RELH  3315


 Score = 15.1 bits (28),  Expect(2) = 10492
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8865  DPERE  8879
             D ERE
Sbjct  3309  DRERE  3313


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  8991  RKVPCSKLDVS  8959
             RK   SK DVS
Sbjct  40    RKTSSSKHDVS  50


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  1257  QASQEVKNWM  1286
             Q  QE+KN M
Sbjct  368   QKNQEIKN-M  376


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  3705  QHTKELEEM  3731
             QH  ++EEM
Sbjct  455   QHMAQMEEM  463


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  810  VEEKAFSPEVI  842
            VEE  FS E I
Sbjct  534  VEELSFSREQI  544


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R EEKE
Sbjct  732   RQEEKE  737


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8368  LLFDHLP  8348
             L  DHLP
Sbjct  1070  LILDHLP  1076


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  562   LSSSDP  545
             LS SDP
Sbjct  1530  LSNSDP  1535


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2702  EELRQHLLR  2728
             E++RQ L R
Sbjct  1588  EDMRQELVR  1596


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  219   QRSSLD  236
             QRSS D
Sbjct  1639  QRSSID  1644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  3728  NEQVDKL  3748
             NE+++KL
Sbjct  2143  NEEIEKL  2149


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2334  LIRELKT  2354
             LIR+L T
Sbjct  2315  LIRDLET  2321


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4714  TMKALIQ  4734
             T+KA IQ
Sbjct  2862  TLKAVIQ  2868


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4719  HSDVYKT  4699
             HSD Y T
Sbjct  2883  HSDAYQT  2889


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7381  DGTGQ  7395
             DGTGQ
Sbjct  3322  DGTGQ  3326


 Score = 15.9 bits (30),  Expect(2) = 14407
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2067  NRFLPIML  2044
             NR L I+L
Sbjct  1729  NRLLKILL  1736


 Score = 15.9 bits (30),  Expect(2) = 14407
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5177  ELKNE  5191
             ELK E
Sbjct  3155  ELKSE  3159


 Score = 15.1 bits (28),  Expect(2) = 14407
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2119  YSLNRAN  2099
             Y L  AN
Sbjct  1722  YALQKAN  1728


 Score = 15.1 bits (28),  Expect(2) = 14407
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5057  KDKAT  5071
             KD AT
Sbjct  3136  KDRAT  3140


 Score = 15.5 bits (29),  Expect(2) = 17022
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5104  DGTSPRRP  5127
             DGT   RP
Sbjct  3322  DGTGQSRP  3329


 Score = 15.1 bits (28),  Expect(2) = 17022
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5165  ELLEE  5179
             ELL E
Sbjct  3353  ELLNE  3357


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7710  KNRKTS  7727
             K RKTS
Sbjct  38    KKRKTS  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2735  LTTPDK  2752
             LTT DK
Sbjct  352   LTTADK  357


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1257  QASQEVKNWM  1286
             Q S+E+K  M
Sbjct  389   QSSEEIKQLM  398


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1356  ATLEEMMT  1379
             A +EEM T
Sbjct  458   AQMEEMKT  465


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2699  IEELRQ  2716
             IE LRQ
Sbjct  728   IEILRQ  733


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  3453  EKQDMLLIEED  3485
             EK+   LIEE+
Sbjct  819   EKEIEILIEEN  829


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6535  INSTAVK  6555
             IN T VK
Sbjct  905   INPTTVK  911


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4241  KELKKI  4258
             KEL KI
Sbjct  1159  KELQKI  1164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +2

Query  1895  LEEM------SLPGR  1921
             LEE+      SL GR
Sbjct  1657  LEELEALKQLSLAGR  1671


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/16 (37%), Positives = 6/16 (37%), Gaps = 8/16 (50%)
 Frame = -3

Query  6419  NVW--------ELAQR  6396
             N W        EL QR
Sbjct  1809  NMWSKVTEEGTELSQR  1824


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -3

Query  2096  ENLKCNQSE  2070
             E LKC Q E
Sbjct  1891  ESLKC-QEE  1898


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             +LQKQ+
Sbjct  2018  DLQKQV  2023


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2282  IKKKDST  2302
             I KK+ST
Sbjct  2227  IQKKEST  2233


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/15 (33%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  7412  IVQQQNNLLRAIEAQ  7456
             ++++ N L R  E Q
Sbjct  2308  VIEEKNELIRDLETQ  2322


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  3644  LVNQIIEQL  3670
             LV QI  QL
Sbjct  2547  LVSQI--QL  2553


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7890  ELGRDI  7907
             ELG DI
Sbjct  2588  ELGSDI  2593


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  99    LEALKA  82
             LEAL A
Sbjct  2683  LEALRA  2688


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6597  LTDLIT  6580
             L DLIT
Sbjct  2986  LKDLIT  2991


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  5718  KNRQVN**TNRK  5753
             K+RQV     RK
Sbjct  3374  KDRQV----HRK  3381


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1239  KTLRAEQ  1259
             KTL  EQ
Sbjct  3381  KTLQTEQ  3387


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4825  IWVRE  4839
             IWV E
Sbjct  3540  IWVQE  3544


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +3

Query  2202  KF-VQRWKR  2225
             KF V RW R
Sbjct  3771  KFLVRRWHR  3779


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2124  TGTVSI  2107
             TG VSI
Sbjct  3781  TGSVSI  3786


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  2191  SISRNLYRDG  2220
             S+S N  RDG
Sbjct  3783  SVSININRDG  3792


 Score = 15.1 bits (28),  Expect(2) = 19832
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  3144  KQENMQE  3164
             K E M E
Sbjct  221   KDETMRE  227


 Score = 15.1 bits (28),  Expect(2) = 19832
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3194  QLTEAVQK  3217
             +LTE  QK
Sbjct  230   ELTEQSQK  237


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8859  MDDPERE  8879
             M+D ER+
Sbjct  1     MEDEERQ  7


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3766  ESTIFR  3783
             ESTI R
Sbjct  80    ESTIMR  85


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7551  GFGVALE  7571
             GF V LE
Sbjct  98    GFSVELE  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  3604  RN--HSST  3621
             RN  HSST
Sbjct  252   RNSTHSST  259


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3048  IMTHQ  3062
             I+THQ
Sbjct  270   ILTHQ  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  413  EKI*IKTYSM  442
            EKI  K Y M
Sbjct  303  EKI--KVYEM  310


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4226  VESMNKE  4246
             VE  NKE
Sbjct  316   VENSNKE  322


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2450  ELKNM  2436
             E KNM
Sbjct  372   EIKNM  376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  4948  LIAESE--KQ  4925
             LI E E  KQ
Sbjct  825   LIEENEDLKQ  834


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7908  EYPCL  7894
             EY CL
Sbjct  867   EYACL  871


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6615  LALSVKLTDL  6586
             L LS  L DL
Sbjct  953   LELSQRLSDL  962


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6277  AERIC  6291
             A+RIC
Sbjct  1115  AQRIC  1119


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6406  NSHTLL  6423
             N HTLL
Sbjct  1255  NMHTLL  1260


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1635  LGKIW  1649
             L KIW
Sbjct  1277  LSKIW  1281


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7179  LEEEI  7193
             LEEE+
Sbjct  1440  LEEEV  1444


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7508  ILAVERY  7528
             IL  ERY
Sbjct  1716  ILSNERY  1722


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2899  SDLPRD  2916
             SD+PR+
Sbjct  1801  SDMPRN  1806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4526  IQDNSDI  4546
             IQ+  DI
Sbjct  1938  IQEKTDI  1944


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  688   QQLTQDT  708
             QQL Q+T
Sbjct  1992  QQLLQET  1998


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7162  VRDLQT  7179
             +RDL+T
Sbjct  2316  IRDLET  2321


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3945  VQEY  3956
             VQEY
Sbjct  2556  VQEY  2559


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  5323  ELGVDIAE*AL  5355
             ELG DI   AL
Sbjct  2588  ELGSDIS--AL  2596


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +2

Query  5150  NEWTLELLEELKNEAV  5197
             NE     LE L  E V
Sbjct  2681  NE-----LEALRAESV  2691


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3804  MNMRNIT  3824
             MN R IT
Sbjct  3093  MNGRKIT  3099


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2604  LLENKIQ  2624
             LLE  IQ
Sbjct  3113  LLEYNIQ  3119


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2083  ATNLSQQISS  2054
             AT L +Q SS
Sbjct  3139  ATELQEQLSS  3148


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  606   RIEIKD-TKE  632
             R E+KD T E
Sbjct  3185  RLEVKDKTDE  3194


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8038  LGRSAE  8055
             LGRS E
Sbjct  3223  LGRSEE  3228


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4922  KVIQMN  4905
             K I+MN
Sbjct  3489  KLIEMN  3494


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1514  QLWQRRAHS  1540
             Q  QR A+S
Sbjct  19    QFRQRKAQS  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  3462  DMLLIEEDKK  3491
             +M   E+DKK
Sbjct  309   EM---EQDKK  315


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1195  KDQRNPLETM  1224
             KD+   LE M
Sbjct  781   KDEKKTLEDM  790


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  371  IRSMGKNSV  397
            I S  K+SV
Sbjct  809  IKSKSKDSV  817


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3077  EIQKQ  3091
             EI+KQ
Sbjct  842   EIEKQ  846


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1680  LQSRPEPTAPP  1712
             LQ   E T PP
Sbjct  1372  LQAVSESTVPP  1382


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  1378  VIISSSVA  1355
             VI+S S+A
Sbjct  1447  VIVSMSIA  1454


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = +2

Query  7418  QQQNNLLRAIEAQQHLLQL  7474
             QQ   LLR    Q H+ Q+
Sbjct  1602  QQATELLR----QAHMRQM  1616


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2495  SINNE  2509
             SI+NE
Sbjct  1642  SIDNE  1646


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2705  ELRQHLLRWG  2734
             EL Q L R G
Sbjct  1820  ELSQRLVRSG  1829


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8229  MAVALSK  8209
             +AV LSK
Sbjct  1913  LAVELSK  1919


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +1

Query  5335  DIAE*ALLDRGEQEM  5379
             DI      DR EQE+
Sbjct  1943  DI-----IDRLEQEL  1952


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  4394  DIQTKE----LQ  4417
             +IQ KE    LQ
Sbjct  2226  EIQKKESTTRLQ  2237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  691   QLTQD  705
             QLTQ+
Sbjct  2417  QLTQE  2421


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  5224  M-EPNPRKMSNS  5192
             M EP P K+S S
Sbjct  2758  MFEPLPIKLSKS  2769


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6990  TLKEVTQ  7010
             TLK V Q
Sbjct  2862  TLKAVIQ  2868


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  8552  DWKTHLLLLL  8523
             DW   LLL L
Sbjct  3013  DWRGELLLAL  3022


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4986  EYQA  4997
             EYQA
Sbjct  3066  EYQA  3069


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4176  ESSRNLE  4196
             E  RNLE
Sbjct  3283  EQGRNLE  3289


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  384   EKIRLR  401
             EK+R R
Sbjct  3297  EKVRIR  3302


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6326  NDTTSYKLTS  6355
             N+T  YKL S
Sbjct  3356  NETEKYKLDS  3365


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3081  YRSR  3092
             YRSR
Sbjct  3823  YRSR  3826


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7430  NLLRAIE  7450
             NLLR  E
Sbjct  132   NLLREEE  138


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2328  ENLIREL  2348
             E L REL
Sbjct  172   EELNREL  178


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/8 (37%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  9058  MQDLRARH  9035
             M+++  RH
Sbjct  460   MEEMKTRH  467


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = +2

Query  1640  EDLAFLQGKARE---FSSEQT-RA  1699
             EDL        E   FS EQ  RA
Sbjct  531   EDLV-------EELSFSREQIQRA  547


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  9064  QLLF  9075
             QLLF
Sbjct  628   QLLF  631


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  1903  NEFARKMET  1929
             NE   K ET
Sbjct  672   NEMSQKIET  680


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7661  WDREI  7675
             W+ EI
Sbjct  818   WEKEI  822


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5734  IDRLIERAED  5763
             I+ LIE  ED
Sbjct  822   IEILIEENED  831


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6961  IKPSTIK  6941
             I P T+K
Sbjct  905   INPTTVK  911


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6410  ELAQR  6396
             EL QR
Sbjct  954   ELSQR  958


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = +3

Query  8523  QEEEEVGFPVTPQVPLR  8573
             QE E        QV LR
Sbjct  985   QEKE--------QVSLR  993


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/10 (40%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  879   QDLNTMLNTV  908
             +++ T+LN V
Sbjct  1254  ENMHTLLNKV  1263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4170  HQQA  4159
             HQQA
Sbjct  1601  HQQA  1604


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7655  MEWDRE  7672
             ME  RE
Sbjct  1616  MERQRE  1621


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2359  PEVLS  2345
             PE+LS
Sbjct  1714  PEILS  1718


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5852  RSSTSQ  5835
             RSS SQ
Sbjct  1759  RSSKSQ  1764


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3714  KELEEMNK  3737
             K+LE M K
Sbjct  2060  KQLEKMRK  2067


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  199   PESERETR  222
             P SE +TR
Sbjct  2102  PISEHQTR  2109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  2322  ISENLIRE  2345
             ISE   RE
Sbjct  2103  ISEHQTRE  2110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5032  AKYCRD  5015
             AK+C D
Sbjct  2560  AKFCQD  2565


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2761  ERTSI  2775
             ERT I
Sbjct  2574  ERTNI  2578


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3533  QAIYL  3547
             Q IYL
Sbjct  2903  QGIYL  2907


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  588   LYCVHQRIE  614
             L C  QRI+
Sbjct  3053  LNCLEQRIQ  3061


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2373  EYHIPQ  2390
             EY I Q
Sbjct  3115  EYNIQQ  3120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6675  IQEKES  6692
             IQ+K+S
Sbjct  3118  IQQKQS  3123


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2725  QQMLSQLL  2702
             QQ  SQ+L
Sbjct  3119  QQKQSQML  3126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4044  QQKQ  4055
             QQKQ
Sbjct  3119  QQKQ  3122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8948  LQELLTS  8968
             LQE L S
Sbjct  3142  LQEQLSS  3148


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4563  EKQRSL  4580
             +KQR L
Sbjct  3244  QKQRNL  3249


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3714  KELEE  3728
             K+LEE
Sbjct  3342  KQLEE  3346


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6181  IILQ  6170
             IILQ
Sbjct  3549  IILQ  3552


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +1

Query  8020  RILGTYLGRSAE  8055
             RI G YL R AE
Sbjct  3692  RIYGKYL-R-AE  3701


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1716  ESFR  1727
             ESFR
Sbjct  3701  ESFR  3704


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8183  QELKN  8197
             QE KN
Sbjct  371   QEIKN  375


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4932  KNSQSNTD  4909
             K+SQ  TD
Sbjct  410   KDSQFETD  417


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2696  KIEELR  2713
             K E+LR
Sbjct  429   KLEQLR  434


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3500  LTDTTNQK  3523
             L DT  QK
Sbjct  502   LQDTNSQK  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8517  EAQEEE  8534
             E QE E
Sbjct  616   ESQEAE  621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4978  LGVNIKQDI  5004
             LG+  KQ I
Sbjct  659   LGIHYKQQI  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  469  QLIL  480
            QLIL
Sbjct  694  QLIL  697


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6178  ILQIS  6164
             IL+IS
Sbjct  696   ILEIS  700


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1850  QLKEALLD  1873
             QLK  LL+
Sbjct  749   QLKTELLE  756


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3776  FLDGI  3790
             FLD I
Sbjct  805   FLDSI  809


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8905  RLSNL  8891
             RLS+L
Sbjct  958   RLSDL  962


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3802  LGLIYS  3785
             L L+YS
Sbjct  1120  LSLVYS  1125


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4175  GIKQEFG  4195
             G K EFG
Sbjct  1287  GMKLEFG  1293


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1056  STLQEQ  1073
             S LQ+Q
Sbjct  1348  SSLQQQ  1353


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  3569  EVNIVT--DSQY  3598
             E NIV   + QY
Sbjct  1425  ETNIVKLLEKQY  1436


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -2

Query  7014  VIVSLPSVLF  6985
             VIVS+ S+ F
Sbjct  1447  VIVSM-SIAF  1455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7146  VIATMS  7163
             VI  MS
Sbjct  1447  VIVSMS  1452


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3147  QENMQE  3164
             QE +QE
Sbjct  1623  QEQLQE  1628


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1514  ETLNNLSL  1491
             E L  LSL
Sbjct  1661  EALKQLSL  1668


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4477  LERTSK  4494
             L+R SK
Sbjct  1757  LDRSSK  1762


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8102  VTRIVEL  8122
             V R +EL
Sbjct  2034  VSRFIEL  2040


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2865  MSLTVQL  2845
             +SL VQL
Sbjct  2177  LSLEVQL  2183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5584  IEKLDE  5567
             IE L+E
Sbjct  2341  IEQLNE  2346


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8434  EQHLET  8451
             EQ+ ET
Sbjct  2391  EQQVET  2396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2171  LTEEKIKAL  2197
             LTE+  K L
Sbjct  2461  LTEDALKSL  2469


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1491  QRKIV  1505
             Q KIV
Sbjct  2529  QKKIV  2533


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4427  TKIQN  4441
             T IQN
Sbjct  2576  TNIQN  2580


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6932  TQLFNS  6949
             T+LF S
Sbjct  2668  TELFHS  2673


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7668  EKLTI  7682
             EKL I
Sbjct  2737  EKLSI  2741


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6694  TDSF  6683
             TDSF
Sbjct  2928  TDSF  2931


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2946  LRSLHN  2929
             LR  HN
Sbjct  2939  LRAVHN  2944


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1242  TLRAEQ----ASQE  1271
             TL  EQ     SQE
Sbjct  3099  TLKREQESEKPSQE  3112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4939  ESEKQ  4925
             ES+KQ
Sbjct  3242  ESQKQ  3246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2755  TSERT  2769
             TS+RT
Sbjct  3465  TSDRT  3469


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7678  QLHKL  7692
             QL+KL
Sbjct  3552  QLQKL  3556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1813  KSDLR  1799
             K DLR
Sbjct  3598  KNDLR  3602


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8992  LGTFQGG  9012
             LGT Q G
Sbjct  3882  LGTIQSG  3888


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             +LE EI
Sbjct  102   ELESEI  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5554  QNSQTH  5571
             Q+S TH
Sbjct  151   QDSPTH  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5311  KQQLL  5297
             KQQ L
Sbjct  267   KQQIL  271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  516  LGQLQ  530
            LG+LQ
Sbjct  359  LGELQ  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8343  SYSKI  8329
             SYS I
Sbjct  477   SYSNI  481


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  913  DIKQPC  930
            D KQ C
Sbjct  831  DLKQQC  836


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8931  ELHPEY  8948
             EL+ EY
Sbjct  863   ELQEEY  868


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  544   QDQKNLDH  567
             Q+Q  LDH
Sbjct  1067  QEQLILDH  1074


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1673  EFSSE  1687
             EFS E
Sbjct  1415  EFSGE  1419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3869  VAKEIV  3886
             VAK IV
Sbjct  1444  VAKVIV  1449


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4404  VCMSVA  4387
             V MS+A
Sbjct  1449  VSMSIA  1454


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3651  LTNSD  3637
             L NSD
Sbjct  1530  LSNSD  1534


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1309  MRTQIVR  1329
             MR + VR
Sbjct  1590  MRQELVR  1596


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9136  LVSQR  9122
             LVS+R
Sbjct  1648  LVSER  1652


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  51    LVSQR  37
             LVS+R
Sbjct  1648  LVSER  1652


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8186  ELKNS  8200
             EL NS
Sbjct  1677  ELRNS  1681


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1050  TTSTLQEQIG  1079
             TT   +E IG
Sbjct  1741  TTAAVEETIG  1750


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538   FRQDQ  552
             FRQ Q
Sbjct  1883  FRQKQ  1887


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7566  EQPQI  7552
             EQ QI
Sbjct  1965  EQQQI  1969


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3310  LASHL  3324
             LA HL
Sbjct  2114  LANHL  2118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2597  LEPFR  2611
             LE FR
Sbjct  2204  LEQFR  2208


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8002  IHSISE  8019
             I+SI E
Sbjct  2435  IQSIPE  2440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3377  GTIISL  3360
             G II L
Sbjct  2484  GSIINL  2489


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  409   ERKNI  423
             ER NI
Sbjct  2574  ERTNI  2578


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7151  SNNESEIF  7174
             SN ES  F
Sbjct  2673  SNEESGFF  2680


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  101   YLKHS  87
             YL HS
Sbjct  2906  YLTHS  2910


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6407  LAQRI  6393
             L QRI
Sbjct  3056  LEQRI  3060


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5791  SALVEMGVEM  5820
             S + EM VE+
Sbjct  3123  SQMLEMQVEL  3132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8149  QILVES  8166
             Q+L ES
Sbjct  3291  QVLLES  3296


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5025  IVEIL  5011
             IVE L
Sbjct  3351  IVELL  3355


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8527  RRRRWVFQ  8550
             R R WV Q
Sbjct  3468  RTRNWVLQ  3475


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4613  CVAS  4624
             CVAS
Sbjct  3513  CVAS  3516


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6620  IIVQL  6634
             II QL
Sbjct  3549  IILQL  3553


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3903  HLSQL  3889
             H SQL
Sbjct  3590  HISQL  3594


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8083  ERLTL  8097
             E LTL
Sbjct  3650  EKLTL  3654


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1817  QRPLVTI  1837
             QR L TI
Sbjct  3879  QRRLGTI  3885


>ref|NP_005742.4|  A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length=3907

 GENE ID: 10142 AKAP9 | A kinase (PRKA) anchor protein (yotiao) 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.6 bits (60),  Expect = 8.9
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = +2

Query  2669  DLEIGQHRTKIEELRQHL  2722
             DLEI +HR  IE L   L
Sbjct  643   DLEI-EHRINIEKLKDNL  659


 Score = 22.3 bits (45),  Expect(2) =   185
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 9/29 (31%)
 Frame = +2

Query  7388  QARQ-LLSGIVQQQNNLLRAIEAQQHLLQ  7471
             QA Q  L    QQQ       E Q HLL+
Sbjct  265   QAKQQILT--HQQQ------LEEQDHLLE  285


 Score = 18.5 bits (36),  Expect(2) =   185
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7246  TIRSSTH  7266
             T R STH
Sbjct  250   TLRNSTH  256


 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7040  INMWQKV  7060
             INMW KV
Sbjct  1808  INMWSKV  1814


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -3

Query  2795  VHNPSKGMEVLS  2760
             VHN   GM+VLS
Sbjct  2950  VHN--EGMQVLS  2959


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  3056  PSKDLIAEIQKQ  3091
             PS DL  E QKQ
Sbjct  3340  PSEDLLKELQKQ  3351


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4804  IQEKET  4821
             IQEKET
Sbjct  324   IQEKET  329


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1021  ENQGEV  1038
             ENQGEV
Sbjct  1690  ENQGEV  1695


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4406  KELQKQ  4423
             KELQKQ
Sbjct  3346  KELQKQ  3351


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8108  RIVELL  8125
             RIVELL
Sbjct  3358  RIVELL  3363


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             Q  ELQK+I
Sbjct  720   QINELQKEI  728


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3226  CGYFLHCLC  3200
             C YFL+ LC
Sbjct  1199  CSYFLQTLC  1207


 Score = 20.2 bits (40),  Expect(2) =  1249
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 15/29 (51%)
 Frame = +2

Query  2669  DLEIGQHRTKIEE-----------LRQHL  2722
             DLE     TK EE           L Q+L
Sbjct  1330  DLE----KTKLEEQVQELESLISSLQQQL  1354


 Score = 16.8 bits (32),  Expect(2) =  1249
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2632  YLSIH  2646
             +LSIH
Sbjct  1304  FLSIH  1308


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +3

Query  3705  QH-----TKELEEM  3731
             QH       ELEEM
Sbjct  168   QHEIEELNRELEEM  181


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             EEKIK L
Sbjct  1155  EEKIKEL  1161


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 33/76 (43%)
 Frame = +3

Query  780   PRT-LNAWVKVVEE----------KAFS-----PEVIPMFSALSEGATPQDLNTMLNTVG  911
             PR   N W KV EE            F      PE         E     +L  MLN + 
Sbjct  1804  PRNDINMWSKVTEEGTELSQRLVRSGFAGTEIDPE--------NE-----EL--MLN-IS  1847

Query  912   GH-QAAMQMLKETINE  956
                QAA + L E I E
Sbjct  1848  SRLQAAVEKLLEAISE  1863


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +2

Query  5150  NEWTLELLEELKNEAVRHF  5206
             NE   E LE++  E VR++
Sbjct  1583  NE---EQLEDMRQELVRQY  1598


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +2

Query  4397  IQTKE-----LQKQITKIQ  4438
             IQ KE     L  Q+TK Q
Sbjct  2287  IQEKEVEIDQLNEQVTKLQ  2305


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6675  IQEKESV  6695
             IQEKE +
Sbjct  324   IQEKETI  330


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             LSQ QIG
Sbjct  1493  LSQDQIG  1499


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 5/19 (26%)
 Frame = +2

Query  4232  SMNKELKKIIGQVRDQ-AE  4285
             S+ K+L     QVRD+ AE
Sbjct  2728  SLQKDL----SQVRDHLAE  2742


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -2

Query  8913  MLGG---CQTSTLTLL  8875
             +LGG   C+  TL LL
Sbjct  3725  LLGGFQECEDATLALL  3740


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6617  TIIVQLNT  6640
             TII +LNT
Sbjct  329   TIIEELNT  336


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3474  IEEDKK  3491
             IEE+KK
Sbjct  339   IEEEKK  344


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  5165  ELLEELKNEA  5194
             EL  ELK EA
Sbjct  584   EL--ELKHEA  591


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = +2

Query  134   LEIPQTLLVS------VEN  172
             LE  Q LLVS      VE+
Sbjct  2156  LE--QALLVSADTFQKVED  2172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4804  IQEKETGI  4827
             IQEKE  I
Sbjct  2287  IQEKEVEI  2294


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6398  FEPIPI  6415
             FEP PI
Sbjct  2767  FEPLPI  2772


 Score = 19.3 bits (38),  Expect(2) =  3833
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 11/26 (42%)
 Frame = +3

Query  4272  EIRLNILRQQYKWQYSSTILKEKGGL  4349
             EI   ILRQ+          KEKG L
Sbjct  727   EI--EILRQEE---------KEKGTL  741


 Score = 18.5 bits (36),  Expect(2) =  3833
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             EL+EM
Sbjct  436   ELDEM  440


 Score = 15.9 bits (30),  Expect(2) =  3833
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3587  DSQYALGIIQ  3616
             DSQ+   I+Q
Sbjct  411   DSQFETDIVQ  420


 Score = 15.1 bits (28),  Expect(2) =  3833
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4465  QKSTLE  4482
             +K TLE
Sbjct  737   EKGTLE  742


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 10/27 (37%)
 Frame = +2

Query  2177  EEKIKALVEICTEMEKEGKISKIGPEN  2257
             +EKIK       EME + K+     EN
Sbjct  302   QEKIKV-----YEMEQDKKV-----EN  318


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4866  YSTQVD  4883
             YST+VD
Sbjct  1124  YSTHVD  1129


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  6463  DVQWNRTMY  6489
             D Q  RTMY
Sbjct  1395  DAQ--RTMY  1401


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5767  GNESEGEI  5790
             GNE +GE+
Sbjct  1688  GNENQGEV  1695


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +1

Query  8443  LETWKNMEQSQVAIQQLPMLL  8505
             LE  KN E     +QQL M L
Sbjct  2219  LEN-KNEE-----VQQLHMQL  2233


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = +2

Query  6041  ENFNMWKNDMVEQMH  6085
             EN    KN+ V+Q+H
Sbjct  2220  EN----KNEEVQQLH  2230


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6675  IQEKE  6689
             IQEKE
Sbjct  2287  IQEKE  2291


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  804   KVVEEK  821
             KV+EEK
Sbjct  2315  KVIEEK  2320


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  804   KVVEEK  821
             K+VEEK
Sbjct  2545  KIVEEK  2550


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 4/21 (19%)
 Frame = +2

Query  3638  SELVNQIIEQ---LI-KKEKV  3688
             SEL  Q++E    LI  KE V
Sbjct  2609  SELESQVVEMHTSLILEKEQV  2629


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7174  EDLGLI  7157
             E+LGLI
Sbjct  514   EELGLI  519


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +2

Query  6821  EQFGNNKTIIFKQS  6862
             E F  +KT I  QS
Sbjct  1551  EMFSKDKTFIVRQS  1564


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3058  IKRLN  3072
             IKRLN
Sbjct  1630  IKRLN  1634


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5308  QQLLQ  5294
             QQLLQ
Sbjct  1992  QQLLQ  1996


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6675  IQEKESVSR  6701
             IQ KES  R
Sbjct  2235  IQKKESTTR  2243


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = +1

Query  202   ESERETRGALSTQD  243
             ES+     A+STQD
Sbjct  2267  ESD-----AMSTQD  2275


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 12/24 (50%)
 Frame = +2

Query  3194  QLT----------EAVQKITTESI  3235
             QLT          E V+KI  +SI
Sbjct  2425  QLTQELFSLKRERESVEKI--QSI  2446


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8146  PQILV  8160
             PQILV
Sbjct  2795  PQILV  2799


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  543   SEGMVVA  523
             SE MVVA
Sbjct  3156  SEKMVVA  3162


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  1284  MTETLLVQNA  1313
             +TE LL QNA
Sbjct  3584  LTERLLRQNA  3593


 Score = 18.0 bits (35),  Expect(2) =  6423
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             ELQ QI
Sbjct  361   ELQEQI  366


 Score = 15.1 bits (28),  Expect(2) =  6423
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4523  VIQDNSDIK  4549
             ++Q N +IK
Sbjct  366   IVQKNQEIK  374


 Score = 18.0 bits (35),  Expect(2) =  6424
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5807  ISTSAD  5790
             IST AD
Sbjct  107   ISTTAD  112


 Score = 15.1 bits (28),  Expect(2) =  6424
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5868  FSVALQ  5851
             FSV L+
Sbjct  99    FSVELE  104


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1535  HSQKLQ  1552
             +SQKLQ
Sbjct  234   QSQKLQ  239


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +3

Query  8787  EPDK-IEEANKGE  8822
             E DK +E  NK E
Sbjct  311   EQDKKVENSNKEE  323


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 3/13 (23%)
 Frame = +2

Query  5162  LELLE-ELKNEAV  5197
             LE+LE E KN AV
Sbjct  600   LEMLEKE-KN-AV  610


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4607  HLPSV  4593
             HLPSV
Sbjct  1074  HLPSV  1078


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4406  KELQK  4420
             KELQK
Sbjct  1159  KELQK  1163


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 11/27 (40%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEWTLELLEELK  5185
             ME   EDQ    E       +L EE K
Sbjct  1616  MERQREDQ----E-------QLQEEIK  1631


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/29 (31%), Positives = 11/29 (37%), Gaps = 13/29 (44%)
 Frame = +3

Query  7617  INLWNRFGIT-----------RPGWSGTE  7670
             IN+W    +T           R G  GTE
Sbjct  1808  INMWSK--VTEEGTELSQRLVRSGFAGTE  1834


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4547  KVVPR  4561
             KVVPR
Sbjct  2095  KVVPR  2099


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2057  RNLLTQIGC  2083
             R+L TQI C
Sbjct  2325  RDLETQIEC  2333


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1872  IQEQMIQY  1895
             IQEQ ++Y
Sbjct  3068  IQEQGVEY  3075


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6548  LLNGSLAEEE  6577
             LLN  LA E+
Sbjct  3205  LLNDTLASEQ  3214


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  235   SRELLW  218
             SREL W
Sbjct  3217  SRELQW  3222


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  3191  KQL-TEAVQKITTES  3232
             KQL  E  QKI  ES
Sbjct  3267  KQLLNESQQKI--ES  3279


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2325  SENLIREL  2348
             SE+L  EL
Sbjct  3341  SEDLLKEL  3348


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4175  GIKQEF  4192
             GI QEF
Sbjct  3438  GIMQEF  3443


 Score = 16.8 bits (32),  Expect(2) =  9023
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  3377  QLEKEPIVGAETF  3415
             +LE    V A+TF
Sbjct  2155  ELEQALLVSADTF  2167


 Score = 15.5 bits (29),  Expect(2) =  9023
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3310  LASHL  3324
             LA HL
Sbjct  2114  LANHL  2118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1359  TLEEMM  1376
             TLE+M+
Sbjct  786   TLEDML  791


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3203  EAVQKITTE  3229
             E V+K TTE
Sbjct  932   EVVEKDTTE  940


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6074  EQMHEDI  6094
             EQ++E+I
Sbjct  1624  EQLQEEI  1630


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4639  LEHGKV  4656
             LEH KV
Sbjct  1868  LEHAKV  1873


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = +2

Query  8720  LH--TRARGQISTDL  8758
             LH   RAR Q   +L
Sbjct  1903  LHEESRAREQLAVEL  1917


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +2

Query  6560  SLAEE--------EVVI  6586
             SL EE        +VVI
Sbjct  2376  SLSEEADSLKHQLDVVI  2392


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  924   AMQMLKE  944
             A Q+LKE
Sbjct  2860  AVQLLKE  2866


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5411  SIQEVS  5428
             SIQ+VS
Sbjct  2972  SIQQVS  2977


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7202  NWRSEL  7219
             +WR EL
Sbjct  3021  DWRGEL  3026


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6449  LESQNQ  6432
             LESQ Q
Sbjct  3249  LESQKQ  3254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2749  QKTSER  2766
             QK SER
Sbjct  3531  QKASER  3536


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1062  LQEQIGW  1082
             L+EQI W
Sbjct  3616  LEEQIRW  3622


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1733  GRDNNS  1750
             GRDN S
Sbjct  3629  GRDNSS  3634


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7907  SPLSFQ  7924
             SPL FQ
Sbjct  3842  SPLPFQ  3847


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3994  PGSSSCSQ  4017
             PGS  CSQ
Sbjct  3859  PGSLACSQ  3866


 Score = 16.8 bits (32),  Expect(2) = 10482
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8928  RELH  8939
             RELH
Sbjct  3320  RELH  3323


 Score = 15.1 bits (28),  Expect(2) = 10482
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8865  DPERE  8879
             D ERE
Sbjct  3317  DRERE  3321


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  8991  RKVPCSKLDVS  8959
             RK   SK DVS
Sbjct  40    RKTSSSKHDVS  50


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  1257  QASQEVKNWM  1286
             Q  QE+KN M
Sbjct  368   QKNQEIKN-M  376


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  3705  QHTKELEEM  3731
             QH  ++EEM
Sbjct  455   QHMAQMEEM  463


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  810  VEEKAFSPEVI  842
            VEE  FS E I
Sbjct  534  VEELSFSREQI  544


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R EEKE
Sbjct  732   RQEEKE  737


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8368  LLFDHLP  8348
             L  DHLP
Sbjct  1070  LILDHLP  1076


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  562   LSSSDP  545
             LS SDP
Sbjct  1530  LSNSDP  1535


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2702  EELRQHLLR  2728
             E++RQ L R
Sbjct  1588  EDMRQELVR  1596


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  219   QRSSLD  236
             QRSS D
Sbjct  1639  QRSSID  1644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  3728  NEQVDKL  3748
             NE+++KL
Sbjct  2143  NEEIEKL  2149


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2334  LIRELKT  2354
             LIR+L T
Sbjct  2323  LIRDLET  2329


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4714  TMKALIQ  4734
             T+KA IQ
Sbjct  2870  TLKAVIQ  2876


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4719  HSDVYKT  4699
             HSD Y T
Sbjct  2891  HSDAYQT  2897


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7381  DGTGQ  7395
             DGTGQ
Sbjct  3330  DGTGQ  3334


 Score = 15.9 bits (30),  Expect(2) = 14395
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2067  NRFLPIML  2044
             NR L I+L
Sbjct  1729  NRLLKILL  1736


 Score = 15.9 bits (30),  Expect(2) = 14395
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5177  ELKNE  5191
             ELK E
Sbjct  3163  ELKSE  3167


 Score = 15.1 bits (28),  Expect(2) = 14395
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2119  YSLNRAN  2099
             Y L  AN
Sbjct  1722  YALQKAN  1728


 Score = 15.1 bits (28),  Expect(2) = 14395
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5057  KDKAT  5071
             KD AT
Sbjct  3144  KDRAT  3148


 Score = 15.5 bits (29),  Expect(2) = 17000
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5104  DGTSPRRP  5127
             DGT   RP
Sbjct  3330  DGTGQSRP  3337


 Score = 15.1 bits (28),  Expect(2) = 17000
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5165  ELLEE  5179
             ELL E
Sbjct  3361  ELLNE  3365


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7710  KNRKTS  7727
             K RKTS
Sbjct  38    KKRKTS  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2735  LTTPDK  2752
             LTT DK
Sbjct  352   LTTADK  357


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1257  QASQEVKNWM  1286
             Q S+E+K  M
Sbjct  389   QSSEEIKQLM  398


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1356  ATLEEMMT  1379
             A +EEM T
Sbjct  458   AQMEEMKT  465


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2699  IEELRQ  2716
             IE LRQ
Sbjct  728   IEILRQ  733


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  3453  EKQDMLLIEED  3485
             EK+   LIEE+
Sbjct  819   EKEIEILIEEN  829


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6535  INSTAVK  6555
             IN T VK
Sbjct  905   INPTTVK  911


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4241  KELKKI  4258
             KEL KI
Sbjct  1159  KELQKI  1164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +2

Query  1895  LEEM------SLPGR  1921
             LEE+      SL GR
Sbjct  1657  LEELEALKQLSLAGR  1671


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/16 (37%), Positives = 6/16 (37%), Gaps = 8/16 (50%)
 Frame = -3

Query  6419  NVW--------ELAQR  6396
             N W        EL QR
Sbjct  1809  NMWSKVTEEGTELSQR  1824


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -3

Query  2096  ENLKCNQSE  2070
             E LKC Q E
Sbjct  1891  ESLKC-QEE  1898


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             +LQKQ+
Sbjct  2018  DLQKQV  2023


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2282  IKKKDST  2302
             I KK+ST
Sbjct  2235  IQKKEST  2241


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/15 (33%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  7412  IVQQQNNLLRAIEAQ  7456
             ++++ N L R  E Q
Sbjct  2316  VIEEKNELIRDLETQ  2330


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  3644  LVNQIIEQL  3670
             LV QI  QL
Sbjct  2555  LVSQI--QL  2561


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7890  ELGRDI  7907
             ELG DI
Sbjct  2596  ELGSDI  2601


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  99    LEALKA  82
             LEAL A
Sbjct  2691  LEALRA  2696


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6597  LTDLIT  6580
             L DLIT
Sbjct  2994  LKDLIT  2999


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  5718  KNRQVN**TNRK  5753
             K+RQV     RK
Sbjct  3382  KDRQV----HRK  3389


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1239  KTLRAEQ  1259
             KTL  EQ
Sbjct  3389  KTLQTEQ  3395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4825  IWVRE  4839
             IWV E
Sbjct  3548  IWVQE  3552


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +3

Query  2202  KF-VQRWKR  2225
             KF V RW R
Sbjct  3779  KFLVRRWHR  3787


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2124  TGTVSI  2107
             TG VSI
Sbjct  3789  TGSVSI  3794


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  2191  SISRNLYRDG  2220
             S+S N  RDG
Sbjct  3791  SVSININRDG  3800


 Score = 15.1 bits (28),  Expect(2) = 19823
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  3144  KQENMQE  3164
             K E M E
Sbjct  221   KDETMRE  227


 Score = 15.1 bits (28),  Expect(2) = 19823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3194  QLTEAVQK  3217
             +LTE  QK
Sbjct  230   ELTEQSQK  237


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8859  MDDPERE  8879
             M+D ER+
Sbjct  1     MEDEERQ  7


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3766  ESTIFR  3783
             ESTI R
Sbjct  80    ESTIMR  85


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7551  GFGVALE  7571
             GF V LE
Sbjct  98    GFSVELE  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  3604  RN--HSST  3621
             RN  HSST
Sbjct  252   RNSTHSST  259


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3048  IMTHQ  3062
             I+THQ
Sbjct  270   ILTHQ  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  413  EKI*IKTYSM  442
            EKI  K Y M
Sbjct  303  EKI--KVYEM  310


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4226  VESMNKE  4246
             VE  NKE
Sbjct  316   VENSNKE  322


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2450  ELKNM  2436
             E KNM
Sbjct  372   EIKNM  376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  4948  LIAESE--KQ  4925
             LI E E  KQ
Sbjct  825   LIEENEDLKQ  834


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7908  EYPCL  7894
             EY CL
Sbjct  867   EYACL  871


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6615  LALSVKLTDL  6586
             L LS  L DL
Sbjct  953   LELSQRLSDL  962


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6277  AERIC  6291
             A+RIC
Sbjct  1115  AQRIC  1119


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6406  NSHTLL  6423
             N HTLL
Sbjct  1255  NMHTLL  1260


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1635  LGKIW  1649
             L KIW
Sbjct  1277  LSKIW  1281


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7179  LEEEI  7193
             LEEE+
Sbjct  1440  LEEEV  1444


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7508  ILAVERY  7528
             IL  ERY
Sbjct  1716  ILSNERY  1722


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2899  SDLPRD  2916
             SD+PR+
Sbjct  1801  SDMPRN  1806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4526  IQDNSDI  4546
             IQ+  DI
Sbjct  1938  IQEKTDI  1944


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  688   QQLTQDT  708
             QQL Q+T
Sbjct  1992  QQLLQET  1998


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7162  VRDLQT  7179
             +RDL+T
Sbjct  2324  IRDLET  2329


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3945  VQEY  3956
             VQEY
Sbjct  2564  VQEY  2567


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  5323  ELGVDIAE*AL  5355
             ELG DI   AL
Sbjct  2596  ELGSDIS--AL  2604


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +2

Query  5150  NEWTLELLEELKNEAV  5197
             NE     LE L  E V
Sbjct  2689  NE-----LEALRAESV  2699


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3804  MNMRNIT  3824
             MN R IT
Sbjct  3101  MNGRKIT  3107


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2604  LLENKIQ  2624
             LLE  IQ
Sbjct  3121  LLEYNIQ  3127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2083  ATNLSQQISS  2054
             AT L +Q SS
Sbjct  3147  ATELQEQLSS  3156


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  606   RIEIKD-TKE  632
             R E+KD T E
Sbjct  3193  RLEVKDKTDE  3202


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8038  LGRSAE  8055
             LGRS E
Sbjct  3231  LGRSEE  3236


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4922  KVIQMN  4905
             K I+MN
Sbjct  3497  KLIEMN  3502


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1514  QLWQRRAHS  1540
             Q  QR A+S
Sbjct  19    QFRQRKAQS  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  3462  DMLLIEEDKK  3491
             +M   E+DKK
Sbjct  309   EM---EQDKK  315


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1195  KDQRNPLETM  1224
             KD+   LE M
Sbjct  781   KDEKKTLEDM  790


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  371  IRSMGKNSV  397
            I S  K+SV
Sbjct  809  IKSKSKDSV  817


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3077  EIQKQ  3091
             EI+KQ
Sbjct  842   EIEKQ  846


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1680  LQSRPEPTAPP  1712
             LQ   E T PP
Sbjct  1372  LQAVSESTVPP  1382


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  1378  VIISSSVA  1355
             VI+S S+A
Sbjct  1447  VIVSMSIA  1454


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = +2

Query  7418  QQQNNLLRAIEAQQHLLQL  7474
             QQ   LLR    Q H+ Q+
Sbjct  1602  QQATELLR----QAHMRQM  1616


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2495  SINNE  2509
             SI+NE
Sbjct  1642  SIDNE  1646


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2705  ELRQHLLRWG  2734
             EL Q L R G
Sbjct  1820  ELSQRLVRSG  1829


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8229  MAVALSK  8209
             +AV LSK
Sbjct  1913  LAVELSK  1919


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +1

Query  5335  DIAE*ALLDRGEQEM  5379
             DI      DR EQE+
Sbjct  1943  DI-----IDRLEQEL  1952


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  4394  DIQTKE----LQ  4417
             +IQ KE    LQ
Sbjct  2234  EIQKKESTTRLQ  2245


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  691   QLTQD  705
             QLTQ+
Sbjct  2425  QLTQE  2429


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  5224  M-EPNPRKMSNS  5192
             M EP P K+S S
Sbjct  2766  MFEPLPIKLSKS  2777


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6990  TLKEVTQ  7010
             TLK V Q
Sbjct  2870  TLKAVIQ  2876


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  8552  DWKTHLLLLL  8523
             DW   LLL L
Sbjct  3021  DWRGELLLAL  3030


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4986  EYQA  4997
             EYQA
Sbjct  3074  EYQA  3077


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4176  ESSRNLE  4196
             E  RNLE
Sbjct  3291  EQGRNLE  3297


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  384   EKIRLR  401
             EK+R R
Sbjct  3305  EKVRIR  3310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6326  NDTTSYKLTS  6355
             N+T  YKL S
Sbjct  3364  NETEKYKLDS  3373


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3081  YRSR  3092
             YRSR
Sbjct  3831  YRSR  3834


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7430  NLLRAIE  7450
             NLLR  E
Sbjct  132   NLLREEE  138


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2328  ENLIREL  2348
             E L REL
Sbjct  172   EELNREL  178


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/8 (37%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  9058  MQDLRARH  9035
             M+++  RH
Sbjct  460   MEEMKTRH  467


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = +2

Query  1640  EDLAFLQGKARE---FSSEQT-RA  1699
             EDL        E   FS EQ  RA
Sbjct  531   EDLV-------EELSFSREQIQRA  547


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  9064  QLLF  9075
             QLLF
Sbjct  628   QLLF  631


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  1903  NEFARKMET  1929
             NE   K ET
Sbjct  672   NEMSQKIET  680


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7661  WDREI  7675
             W+ EI
Sbjct  818   WEKEI  822


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5734  IDRLIERAED  5763
             I+ LIE  ED
Sbjct  822   IEILIEENED  831


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6961  IKPSTIK  6941
             I P T+K
Sbjct  905   INPTTVK  911


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6410  ELAQR  6396
             EL QR
Sbjct  954   ELSQR  958


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = +3

Query  8523  QEEEEVGFPVTPQVPLR  8573
             QE E        QV LR
Sbjct  985   QEKE--------QVSLR  993


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/10 (40%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  879   QDLNTMLNTV  908
             +++ T+LN V
Sbjct  1254  ENMHTLLNKV  1263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4170  HQQA  4159
             HQQA
Sbjct  1601  HQQA  1604


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7655  MEWDRE  7672
             ME  RE
Sbjct  1616  MERQRE  1621


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2359  PEVLS  2345
             PE+LS
Sbjct  1714  PEILS  1718


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5852  RSSTSQ  5835
             RSS SQ
Sbjct  1759  RSSKSQ  1764


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3714  KELEEMNK  3737
             K+LE M K
Sbjct  2060  KQLEKMRK  2067


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  199   PESERETR  222
             P SE +TR
Sbjct  2102  PISEHQTR  2109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  2322  ISENLIRE  2345
             ISE   RE
Sbjct  2103  ISEHQTRE  2110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5032  AKYCRD  5015
             AK+C D
Sbjct  2568  AKFCQD  2573


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2761  ERTSI  2775
             ERT I
Sbjct  2582  ERTNI  2586


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3533  QAIYL  3547
             Q IYL
Sbjct  2911  QGIYL  2915


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  588   LYCVHQRIE  614
             L C  QRI+
Sbjct  3061  LNCLEQRIQ  3069


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2373  EYHIPQ  2390
             EY I Q
Sbjct  3123  EYNIQQ  3128


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6675  IQEKES  6692
             IQ+K+S
Sbjct  3126  IQQKQS  3131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2725  QQMLSQLL  2702
             QQ  SQ+L
Sbjct  3127  QQKQSQML  3134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4044  QQKQ  4055
             QQKQ
Sbjct  3127  QQKQ  3130


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8948  LQELLTS  8968
             LQE L S
Sbjct  3150  LQEQLSS  3156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4563  EKQRSL  4580
             +KQR L
Sbjct  3252  QKQRNL  3257


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3714  KELEE  3728
             K+LEE
Sbjct  3350  KQLEE  3354


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6181  IILQ  6170
             IILQ
Sbjct  3557  IILQ  3560


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +1

Query  8020  RILGTYLGRSAE  8055
             RI G YL R AE
Sbjct  3700  RIYGKYL-R-AE  3709


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1716  ESFR  1727
             ESFR
Sbjct  3709  ESFR  3712


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8183  QELKN  8197
             QE KN
Sbjct  371   QEIKN  375


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4932  KNSQSNTD  4909
             K+SQ  TD
Sbjct  410   KDSQFETD  417


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2696  KIEELR  2713
             K E+LR
Sbjct  429   KLEQLR  434


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3500  LTDTTNQK  3523
             L DT  QK
Sbjct  502   LQDTNSQK  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8517  EAQEEE  8534
             E QE E
Sbjct  616   ESQEAE  621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4978  LGVNIKQDI  5004
             LG+  KQ I
Sbjct  659   LGIHYKQQI  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  469  QLIL  480
            QLIL
Sbjct  694  QLIL  697


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6178  ILQIS  6164
             IL+IS
Sbjct  696   ILEIS  700


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1850  QLKEALLD  1873
             QLK  LL+
Sbjct  749   QLKTELLE  756


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3776  FLDGI  3790
             FLD I
Sbjct  805   FLDSI  809


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8905  RLSNL  8891
             RLS+L
Sbjct  958   RLSDL  962


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3802  LGLIYS  3785
             L L+YS
Sbjct  1120  LSLVYS  1125


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4175  GIKQEFG  4195
             G K EFG
Sbjct  1287  GMKLEFG  1293


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1056  STLQEQ  1073
             S LQ+Q
Sbjct  1348  SSLQQQ  1353


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  3569  EVNIVT--DSQY  3598
             E NIV   + QY
Sbjct  1425  ETNIVKLLEKQY  1436


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -2

Query  7014  VIVSLPSVLF  6985
             VIVS+ S+ F
Sbjct  1447  VIVSM-SIAF  1455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7146  VIATMS  7163
             VI  MS
Sbjct  1447  VIVSMS  1452


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3147  QENMQE  3164
             QE +QE
Sbjct  1623  QEQLQE  1628


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1514  ETLNNLSL  1491
             E L  LSL
Sbjct  1661  EALKQLSL  1668


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4477  LERTSK  4494
             L+R SK
Sbjct  1757  LDRSSK  1762


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8102  VTRIVEL  8122
             V R +EL
Sbjct  2034  VSRFIEL  2040


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2865  MSLTVQL  2845
             +SL VQL
Sbjct  2185  LSLEVQL  2191


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5584  IEKLDE  5567
             IE L+E
Sbjct  2349  IEQLNE  2354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8434  EQHLET  8451
             EQ+ ET
Sbjct  2399  EQQVET  2404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2171  LTEEKIKAL  2197
             LTE+  K L
Sbjct  2469  LTEDALKSL  2477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1491  QRKIV  1505
             Q KIV
Sbjct  2537  QKKIV  2541


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4427  TKIQN  4441
             T IQN
Sbjct  2584  TNIQN  2588


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6932  TQLFNS  6949
             T+LF S
Sbjct  2676  TELFHS  2681


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7668  EKLTI  7682
             EKL I
Sbjct  2745  EKLSI  2749


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6694  TDSF  6683
             TDSF
Sbjct  2936  TDSF  2939


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2946  LRSLHN  2929
             LR  HN
Sbjct  2947  LRAVHN  2952


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1242  TLRAEQ----ASQE  1271
             TL  EQ     SQE
Sbjct  3107  TLKREQESEKPSQE  3120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4939  ESEKQ  4925
             ES+KQ
Sbjct  3250  ESQKQ  3254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2755  TSERT  2769
             TS+RT
Sbjct  3473  TSDRT  3477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7678  QLHKL  7692
             QL+KL
Sbjct  3560  QLQKL  3564


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1813  KSDLR  1799
             K DLR
Sbjct  3606  KNDLR  3610


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8992  LGTFQGG  9012
             LGT Q G
Sbjct  3890  LGTIQSG  3896


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             +LE EI
Sbjct  102   ELESEI  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5554  QNSQTH  5571
             Q+S TH
Sbjct  151   QDSPTH  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5311  KQQLL  5297
             KQQ L
Sbjct  267   KQQIL  271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  516  LGQLQ  530
            LG+LQ
Sbjct  359  LGELQ  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8343  SYSKI  8329
             SYS I
Sbjct  477   SYSNI  481


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  913  DIKQPC  930
            D KQ C
Sbjct  831  DLKQQC  836


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8931  ELHPEY  8948
             EL+ EY
Sbjct  863   ELQEEY  868


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  544   QDQKNLDH  567
             Q+Q  LDH
Sbjct  1067  QEQLILDH  1074


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1673  EFSSE  1687
             EFS E
Sbjct  1415  EFSGE  1419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3869  VAKEIV  3886
             VAK IV
Sbjct  1444  VAKVIV  1449


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4404  VCMSVA  4387
             V MS+A
Sbjct  1449  VSMSIA  1454


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3651  LTNSD  3637
             L NSD
Sbjct  1530  LSNSD  1534


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1309  MRTQIVR  1329
             MR + VR
Sbjct  1590  MRQELVR  1596


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9136  LVSQR  9122
             LVS+R
Sbjct  1648  LVSER  1652


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  51    LVSQR  37
             LVS+R
Sbjct  1648  LVSER  1652


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8186  ELKNS  8200
             EL NS
Sbjct  1677  ELRNS  1681


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1050  TTSTLQEQIG  1079
             TT   +E IG
Sbjct  1741  TTAAVEETIG  1750


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538   FRQDQ  552
             FRQ Q
Sbjct  1883  FRQKQ  1887


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7566  EQPQI  7552
             EQ QI
Sbjct  1965  EQQQI  1969


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2597  LEPFR  2611
             LE FR
Sbjct  2212  LEQFR  2216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8002  IHSISE  8019
             I+SI E
Sbjct  2443  IQSIPE  2448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3377  GTIISL  3360
             G II L
Sbjct  2492  GSIINL  2497


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  409   ERKNI  423
             ER NI
Sbjct  2582  ERTNI  2586


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7151  SNNESEIF  7174
             SN ES  F
Sbjct  2681  SNEESGFF  2688


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  101   YLKHS  87
             YL HS
Sbjct  2914  YLTHS  2918


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6407  LAQRI  6393
             L QRI
Sbjct  3064  LEQRI  3068


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5791  SALVEMGVEM  5820
             S + EM VE+
Sbjct  3131  SQMLEMQVEL  3140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8149  QILVES  8166
             Q+L ES
Sbjct  3299  QVLLES  3304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5025  IVEIL  5011
             IVE L
Sbjct  3359  IVELL  3363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8527  RRRRWVFQ  8550
             R R WV Q
Sbjct  3476  RTRNWVLQ  3483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4613  CVAS  4624
             CVAS
Sbjct  3521  CVAS  3524


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6620  IIVQL  6634
             II QL
Sbjct  3557  IILQL  3561


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3903  HLSQL  3889
             H SQL
Sbjct  3598  HISQL  3602


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8083  ERLTL  8097
             E LTL
Sbjct  3658  EKLTL  3662


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1817  QRPLVTI  1837
             QR L TI
Sbjct  3887  QRRLGTI  3893


>pdb|2QR0|A  Chain A, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|E  Chain E, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|G  Chain G, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|K  Chain K, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|M  Chain M, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|Q  Chain Q, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|S  Chain S, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
 pdb|2QR0|W  Chain W, Structure Of Vegf Complexed To A Fab Containing Tyr 
And Ser In The Cdrs
Length=213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.2 bits (59),  Expect =    12
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  4528  YYYCPFTF  4505
             YYY PFTF
Sbjct  93    YYYYPFTF  100


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  812  YYFYP  798
            YY+YP
Sbjct  93   YYYYP  97


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YP TFG
Sbjct  96    YPFTFG  101


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  192   KVYACEVTH  200


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -1

Query  6628  YYYGFSI-----VREIDR  6590
             YYY F       V EI R
Sbjct  94    YYYPFTFGQGTKV-EIKR  110


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  170   SKDSTYSLSSTLT-LS  184


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  179   STLTL  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/32 (34%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = -1

Query  9007  PGKSP-----AESPL*QARCQQFLKYSGCSSR  8927
             PGK P       S L          YSG  SR
Sbjct  40    PGKAPKLLIYSASSL----------YSGVPSR  61


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  180  SGARTGT  200
            SG R GT
Sbjct  63   SGSRSGT  69


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  107   EIKRTV  112


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  6043  FCHIYQYYF  6017
             +C+ Y YY+
Sbjct  87    YCQQYSYYY  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  118  FIFPP  122


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  170   SKDSTY  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2321  LLIFS  2307
             LLI+S
Sbjct  46    LLIYS  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7427  SAAALY  7410
             SA  LY
Sbjct  50    SASSLY  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  173   STYSL  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  198   VTHQGLSSPV  207


>ref|NP_443176.2|  sodium/myo-inositol cotransporter 2 [Homo sapiens]
Length=675

 GENE ID: 115584 SLC5A11 | solute carrier family 5 (sodium/glucose
cotransporter), member 11 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.2 bits (59),  Expect =    12
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 4/17 (23%)
 Frame = -2

Query  465  IVLAPCLPILYVLIYIF  415
            I+LA    +LY  IYIF
Sbjct  143  IILA----VLYLFIYIF  155


 Score = 22.3 bits (45),  Expect(2) =    37
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -3

Query  2579  FGILLV---ILSIPV  2544
             F  LLV   IL IPV
Sbjct  424   FVLLLVLVSILWIPV  438


 Score = 21.8 bits (44),  Expect(2) =    37
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2601  SKIFVMLLWN  2572
             S IF M LWN
Sbjct  397   STIFTMDLWN  406


 Score = 25.2 bits (52),  Expect =    93
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
 Frame = +2

Query  7811  YIK---LFIMIVGGLVGLRIVF  7867
             Y K   LFIM+  G+V  RI F
Sbjct  314   YLKVLPLFIMVFPGMVS-RILF  334


 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 8/20 (40%)
 Frame = -3

Query  7778  TNLPIYL--------IPIIL  7743
             T +P YL        IPIIL
Sbjct  126   TTMPEYLRKRFGGIRIPIIL  145


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -3

Query  7565  SNPKSPGAVDPLGIFPQPGFLPG  7497
             S P  P   DPL  FPQ G  PG
Sbjct  6     SSPQPP-QLDPLDAFPQKGLEPG  27


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 28/51 (54%)
 Frame = -2

Query  8229  MAV---AL-SKLTALFFSS*LQYCRRFHQYLRAS---------HPLRPRSS  8116
             MAV   AL S LT  F S              AS         H LRPR S
Sbjct  378   MAVMVAALMSSLTSIFNS--------------ASTIFTMDLWNH-LRPRAS  413


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  5880  QSIMGYLCGRKQPP  5921
             QSI  YL    QPP
Sbjct  452   QSISSYL----QPP  461


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4873  VLYLF  4859
             VLYLF
Sbjct  147   VLYLF  151


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3436  VSCPIYI  3416
             VSC I+I
Sbjct  664   VSCAIFI  670


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3427  PIYIEG  3410
             PIYI G
Sbjct  118   PIYIAG  123


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2560  SFPSLW  2543
             S PSLW
Sbjct  279   SIPSLW  284


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5122  RPRATE  5139
             RPRA E
Sbjct  409   RPRASE  414


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = +3

Query  8577  MTYK-AAVDLSHFLKEKGGLEGL  8642
             M Y  AAV         GG+EGL
Sbjct  219   MGYSFAAV---------GGMEGL  232


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  3424  IYIEGFCSY  3398
             IYI+   SY
Sbjct  449   IYIQSISSY  457


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7115  ITGLLL  7132
             I GLLL
Sbjct  485   ISGLLL  490


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1004  CTRPDER  1024
             C  PDER
Sbjct  506   CDQPDER  512


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -2

Query  3483  LPL--LVTYPAFPNLVS  3439
             LPL  +V    FP +VS
Sbjct  318   LPLFIMV----FPGMVS  330


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +1

Query  2401  EKI-SNSTGC  2427
             +KI SN  GC
Sbjct  347   QKICSNPSGC  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2595  IFVMLL  2578
             +FV+LL
Sbjct  423   VFVLLL  428


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  6267  LMLVL--IL  6247
             L+LVL  IL
Sbjct  426   LLLVLVSIL  434


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4698  WFYRH  4712
             WF RH
Sbjct  556   WFTRH  560


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2394  NPAGC  2380
             NP GC
Sbjct  352   NPSGC  356


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4555  HYFYVTIIL  4529
             HY Y   IL
Sbjct  520   HYLYFSMIL  528


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5829  MVPHL  5815
             MV HL
Sbjct  550   MVSHL  554


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3295  MVDRVL  3312
             MV R+L
Sbjct  328   MVSRIL  333


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  3151  KICKN-EGC  3174
             KIC N  GC
Sbjct  348   KICSNPSGC  356


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 11/25 (44%)
 Frame = +3

Query  6144  SVLV*SALI*RM---ILIPIVVAGE  6209
             SVL        M   I  PI +AG+
Sbjct  108   SVL--------MLAWIFLPIYIAGQ  124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3677  KEKVYLA  3697
             KEK +LA
Sbjct  233   KEKYFLA  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7186  SSRSED  7169
             S RSE+
Sbjct  242   SNRSEN  247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1622  SLSTIF  1605
             SL  IF
Sbjct  388   SLTSIF  393


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  3311  NTLSTMFPM  3285
             N  ST F M
Sbjct  394   NSASTIFTM  402


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  9090  RPSTGKKQLLI  9058
             RP    K+L+I
Sbjct  409   RPRASEKELMI  419


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8974  QARCQQ  8957
             Q RC Q
Sbjct  503   QPRCDQ  508


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2715  CLSSSIFV  2692
             C S  IF+
Sbjct  663   CVSCAIFI  670


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  1606  FIW  1598
             FIW
Sbjct  669   FIW  671


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2304  LVLSFFF  2284
             LVL F F
Sbjct  32    LVLYFLF  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3765  LIPALT  3748
             LI ALT
Sbjct  212   LIGALT  217


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6999  PSVLF  6985
             P VLF
Sbjct  272   PGVLF  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  768  QAISPRTLNA  797
            Q I  RTL A
Sbjct  290  QVIVQRTLAA  299


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  976  LSHSAASSLM  947
            LSH     LM
Sbjct  302  LSHAKGGALM  311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3459  AFPNLV  3442
             A+P LV
Sbjct  360   AYPKLV  365


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 9/18 (50%)
 Frame = -3

Query  3083  VFLLLSLLMGHNTLHVLV  3030
             VF LL L        VLV
Sbjct  423   VFVLL-L--------VLV  431


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4645  VLILIL  4628
             VL L+L
Sbjct  425   VLLLVL  430


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4659  LNFSM  4645
             L FSM
Sbjct  522   LYFSM  526


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1908  LISSNTVS  1885
             LI   TVS
Sbjct  533   LITVSTVS  540


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7878  ESTAKT  7861
             E T KT
Sbjct  600   ENTSKT  605


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7169  SRTHCC  7152
             S TH C
Sbjct  603   SKTHSC  608


>sp|Q6P179.2|ERAP2_HUMAN  RecName: Full=Endoplasmic reticulum aminopeptidase 2; AltName: 
Full=Leukocyte-derived arginine aminopeptidase; Short=L-RAP
Length=960

 GENE ID: 64167 ERAP2 | endoplasmic reticulum aminopeptidase 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.2 bits (59),  Expect =    12
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +1

Query  4675  M-FQGKLGDGF  4704
             M FQ KLGDGF
Sbjct  166   MDFQAKLGDGF  176


 Score = 26.5 bits (55),  Expect =    39
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  5855  SATEKLWVT  5881
             SA +KLWVT
Sbjct  357   SASDKLWVT  365


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 0/19 (0%)
 Frame = +2

Query  2972  IPLTeeaelelaeNREILK  3028
             IPLT          R ILK
Sbjct  588   IPLTYSTSSSNVIHRHILK  606


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2831  LPEKDSW  2851
             LPEK SW
Sbjct  614   LPEKTSW  620


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2261  MDFQA  2247
             MDFQA
Sbjct  166   MDFQA  170


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9033  EWRAL  9047
             EWRAL
Sbjct  576   EWRAL  580


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 9/27 (33%)
 Frame = +3

Query  3756  LESGKYYF*ME*IRPKMNMRNITVIGE  3836
             LES  +Y  M      M+ RNI  I E
Sbjct  703   LES--FYH-M------MDRRNISDISE  720


 Score = 19.3 bits (38),  Expect(2) =  2369
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 1/16 (6%)
 Frame = +3

Query  4173  RESSRNLEFPTIPKVK  4220
             RES R       PKVK
Sbjct  226   RES-RHIALSNMPKVK  240


 Score = 17.2 bits (33),  Expect(2) =  2369
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4072  FSFKISR  4092
             FS KI R
Sbjct  220   FSIKIRR  226


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  4240  IHRFYYSLT  4214
             IHR +Y LT
Sbjct  18    IHRGFYCLT  26


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1448  KFSYHN  1465
             KFSY N
Sbjct  484   KFSYRN  489


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6066  SFFHML  6049
             SF+HM+
Sbjct  705   SFYHMM  710


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  67   SLNKACLE  90
            SL   CLE
Sbjct  498  SLSNSCLE  505


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9152  SLNKACLE  9175
             SL   CLE
Sbjct  498   SLSNSCLE  505


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1368  EMMT  1379
             EMMT
Sbjct  536   EMMT  539


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 12/22 (54%)
 Frame = +2

Query  7607  SWSNK-SLEQIWNHTTWMEWDR  7669
             SWS+K S            WDR
Sbjct  738   SWSDKGSV-----------WDR  748


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3977  LEGKVI  3994
             +EGKVI
Sbjct  845   MEGKVI  850


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -3

Query  4694  PSFP*NIHMVFY  4659
             P F  NIH  FY
Sbjct  14    PMF--NIHRGFY  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7505  RILAV  7519
             RILAV
Sbjct  192   RILAV  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6996  SVLFDP  6979
             S LFDP
Sbjct  348   SLLFDP  353


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +3

Query  8268  YKELVELFATYLE  8306
             Y EL+   ATY E
Sbjct  398   YMELIAVNATYPE  410


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1251  LLEFY  1237
             LL+FY
Sbjct  306   LLDFY  310


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6302  KLDIIPI  6322
             KLD I I
Sbjct  322   KLDLIAI  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  178  LEIFHT  161
            L+IF+T
Sbjct  928  LDIFQT  933


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3708  HTKELE  3725
             H K+LE
Sbjct  111   HSKDLE  116


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  38   LWLTR  52
            LW TR
Sbjct  362  LWVTR  366


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9123  LWLTR  9137
             LW TR
Sbjct  362   LWVTR  366


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  990  ALDALYPILQ  961
            A +A YP LQ
Sbjct  403  AVNATYPELQ  412


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 2/12 (16%)
 Frame = -2

Query  4215  LWGL*GIPNSCL  4180
             LW      NSCL
Sbjct  495   LWS--SLSNSCL  504


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3369  NFTKGGV  3349
             +FT GGV
Sbjct  507   DFTSGGV  513


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -1

Query  4309  HLYCCLKMFSLISY  4268
             HL   LK F L SY
Sbjct  882   HL---LKKFDLGSY  892


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 6/16 (37%)
 Frame = +3

Query  1041  IAGTTS------TLQE  1070
             I GTT        LQE
Sbjct  898   ISGTTAHFSSKDKLQE  913


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +3

Query  6678  QE-K---ESVSREDQGEHL  6722
             QE K   ES   E QG HL
Sbjct  912   QEVKLFFESL--EAQGSHL  928


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4921  LTVFQTLL  4944
             L +FQT L
Sbjct  928   LDIFQTVL  935


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6735  FPIVTN  6718
             FP+ TN
Sbjct  53    FPVATN  58


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1588  FPHFQQPFF  1562
             FP F +P F
Sbjct  208   FPCFDEPLF  216


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -1

Query  8374  IT-----LLFD  8357
             IT     LLFD
Sbjct  342   ITYRETSLLFD  352


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/19 (31%), Positives = 8/19 (42%), Gaps = 3/19 (15%)
 Frame = -3

Query  7265  WVlllmvqfllLYIYIIHF  7209
             WV          Y YI+H+
Sbjct  620   WVKFNVDSNG--Y-YIVHY  635


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8170  TVLESGTK  8193
             TVLE  TK
Sbjct  933   TVLETITK  940


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2180  EKIKALV  2200
             EKI  LV
Sbjct  95    EKIEVLV  101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  5178  SLRMKLLD  5201
             SL  KLLD
Sbjct  303   SL--KLLD  308


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +3

Query  4581  GIMENRW  4601
             G MEN W
Sbjct  334   GAMEN-W  339


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2729  WGLTT  2743
             WGL T
Sbjct  339   WGLIT  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8289  FATYLE  8306
             FA Y+E
Sbjct  395   FAKYME  400


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/28 (35%), Positives = 10/28 (35%), Gaps = 12/28 (42%)
 Frame = -1

Query  6427  GTIMYGNWLK--GY-------LWTGLCN  6371
             G I Y   LK   Y       LW  L N
Sbjct  477   GIIQY---LKKFSYRNAKNDDLWSSLSN  501


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3206  PLLIV  3192
             PLL+V
Sbjct  548   PLLVV  552


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1811  LWQRPL  1828
             LW+ PL
Sbjct  585   LWHIPL  590


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7275  FALVGA  7258
             F LVGA
Sbjct  667   FQLVGA  672


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6777  ALLMLQC  6757
             ALL L C
Sbjct  753   ALLKLAC  759


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4110  QYILTM  4127
             QY L M
Sbjct  811   QYELSM  816


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5797  LVEMGVE  5817
             L+E+G E
Sbjct  840   LIELGME  846


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2533  VLISN  2519
             VL+SN
Sbjct  99    VLVSN  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6830  QIVLLI  6813
             QI LL+
Sbjct  147   QIALLV  152


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7287  TTLLF  7273
             T LLF
Sbjct  347   TSLLF  351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3545  DKLLVT  3528
             DKL VT
Sbjct  360   DKLWVT  365


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  933  MLKETINEE  959
            MLK+   EE
Sbjct  464  MLKDFLGEE  472


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2929  LPYFNP  2912
             L YF P
Sbjct  727   LQYFKP  732


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7438  QQIVLL  7421
             +QI LL
Sbjct  146   EQIALL  151


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6819  LNLLAI  6802
             L+L AI
Sbjct  323   LDLIAI  328


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7766  WASLWN  7783
             W SL N
Sbjct  496   WSSLSN  501


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  3329  PEW  3337
             PEW
Sbjct  575   PEW  577


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  64   LSLNKA  81
            L L+KA
Sbjct  675  LTLDKA  680


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9149  LSLNKA  9166
             L L+KA
Sbjct  675   LTLDKA  680


>ref|NP_056189.1|  SUN domain-containing protein 2 [Homo sapiens]
Length=717

 GENE ID: 25777 SUN2 | Sad1 and UNC84 domain containing 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.2 bits (59),  Expect =    12
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -1

Query  1507  LTIFLWFLKLPL  1472
             L  FLWFL LPL
Sbjct  210   LKTFLWFL-LPL  220


 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  3230  FLWLFFALPLL  3198
             FLW  F LPLL
Sbjct  213   FLW--FLLPLL  221


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 7/14 (50%)
 Frame = -3

Query  809  YFYPCI*SSR*YGL  768
            YFYP       YGL
Sbjct  232  YFYP-------YGL  238


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4485  DQQSSS  4502
             DQQSSS
Sbjct  147   DQQSSS  152


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  5931  VHQMLKHMIQRY  5966
             VH+  K+  QRY
Sbjct  528   VHHIVKQALQRY  539


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = -2

Query  1923  HLPGKLISSN-TVSSAP  1876
             H P K  S N T+SSAP
Sbjct  628   HVP-KALSPNSTISSAP  643


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L EDFR  TA
Sbjct  343   LKEDFRRETA  352


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6044  FLSHLPILLL  6015
             FL  LP LLL
Sbjct  216   FL--LPLLLL  223


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  1032  GSDIAGTTSTL  1064
             GS +AG  STL
Sbjct  24    GSSVAGSQSTL  34


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5564  RLIKLLY  5584
             RL  LLY
Sbjct  175   RLFRLLY  181


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5159  TLELLEEL  5182
             TL LLE L
Sbjct  328   TLALLEGL  335


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4483  FPKWIS  4466
             FP WIS
Sbjct  457   FPAWIS  462


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 13/22 (59%)
 Frame = +3

Query  1245  LRAEQ-------------ASQE  1271
             LRAE+             ASQE
Sbjct  362   LRAEHQQDSEDLFKKIVRASQE  383


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1927  FPSSWQ  1910
             F S WQ
Sbjct  294   FSSNWQ  299


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1794  TSLRSLFG  1817
             T L SLFG
Sbjct  571   TALLSLFG  578


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6576  SSSARL  6559
             SSS RL
Sbjct  150   SSSSRL  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  9115  RLRSGLTR  9092
             RLRS   R
Sbjct  154   RLRSAVSR  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  30   RLRSGLTR  7
            RLRS   R
Sbjct  154  RLRSAVSR  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6332  TTSYKLT  6352
             TT Y LT
Sbjct  186   TTWYRLT  192


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 6/19 (31%)
 Frame = +2

Query  9002  SR---EAWPGRDWGVASPQ  9049
             SR   E W  RD    SP+
Sbjct  254   SRRPDEGWEARD---SSPH  269


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8446  RDAAPTLS  8423
             R+AA  LS
Sbjct  505   REAAASLS  512


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  1448  KFSYHNDAE  1474
             KF Y  D E
Sbjct  664   KFTYDQDGE  672


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7168  DLQTWRRR  7191
             DL   RRR
Sbjct  98    DLRVRRRR  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5445  GTSSFRLT  5422
             GT  +RLT
Sbjct  185   GTTWYRLT  192


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3035  LVLLESL  3015
             L LLE L
Sbjct  329   LALLEGL  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  429  KHIVWASRE  455
            K IV AS E
Sbjct  375  KKIVRASQE  383


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6619  GFSIVR  6602
             GF +VR
Sbjct  609   GFAVVR  614


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6748  HISYFS  6731
             H SY+S
Sbjct  66    HTSYYS  71


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  187  APLLEIF  167
            A LL++F
Sbjct  195  ASLLDVF  201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1214  KGFLWSL  1194
             K FLW L
Sbjct  211   KTFLWFL  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4211  GDCREFQ  4191
             G+C  FQ
Sbjct  599   GNCWAFQ  605


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9055  QDLRAR  9038
             +DLR R
Sbjct  97    EDLRVR  102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6568  RRRG  6579
             RRRG
Sbjct  103   RRRG  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8491  LPMLL  8505
             LP+LL
Sbjct  218   LPLLL  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4539  LLSCIT  4522
             LL C T
Sbjct  222   LLTCLT  227


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1463  NDAERQF  1483
             +D E QF
Sbjct  451   DDVESQF  457


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4749  LLNLF  4735
             LL LF
Sbjct  573   LLSLF  577


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2103  LMGKF  2089
             L+GKF
Sbjct  661   LLGKF  665


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  211  FRFQVP  194
            F FQ P
Sbjct  677  FHFQAP  682


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 5/25 (20%)
 Frame = +2

Query  8081  LRDLLL---IVTRIVELLGRRGWEA  8146
             LR+L     I T + E+ G    EA
Sbjct  485   LREL--ESKILTHVAEMQGKSAREA  507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8656  EDKISL  8673
             ED I L
Sbjct  541   EDRIGL  546


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7917  RFRPT  7931
             R RPT
Sbjct  618   RIRPT  622


>ref|NP_056289.2|  SAM domain and HD domain-containing protein 1 [Homo sapiens]
 sp|Q9Y3Z3.2|SAMH1_HUMAN  RecName: Full=SAM domain and HD domain-containing protein 1; 
AltName: Full=Dendritic cell-derived IFNG-induced protein; Short=DCIP; 
AltName: Full=Monocyte protein 5; Short=MOP-5
Length=626

 GENE ID: 25939 SAMHD1 | SAM domain and HD domain 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 28.2 bits (59),  Expect =    12
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
 Frame = +3

Query  1647  WPSYKGRPGN--FL  1682
             WP YKGRP N  FL
Sbjct  285   WP-YKGRPENKSFL  297


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8931  ELHPEY  8948
             ELHP+Y
Sbjct  37    ELHPDY  42


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 10/21 (47%)
 Frame = -2

Query  8805  LLSYLAQLVLACSTIQRSVDI  8743
             LLSY          IQR V I
Sbjct  100   LLSY----------IQRLVQI  110


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  4884  PE-LADQLIHLY  4916
             PE  A+QLI  Y
Sbjct  542   PEKFAEQLIRVY  553


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3014  REILKE  3031
             REILK+
Sbjct  442   REILKQ  447


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  711  NQVSQ  725
            NQVSQ
Sbjct  535  NQVSQ  539


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6395  IPLDRP  6378
             IPL RP
Sbjct  222   IPLARP  227


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2751  KNIRKN  2768
             KNIR N
Sbjct  66    KNIREN  71


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  3507  TQQIRRLSY-KQ  3539
             T Q  RL Y KQ
Sbjct  138   TPQFQRLRYIKQ  149


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +3

Query  516  LGQLQPSLQTGSE  554
            LG+ QP LQ  SE
Sbjct  182  LGEKQPELQI-SE  193


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7056  FCHMF  7042
             F HMF
Sbjct  213   FSHMF  217


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1136  DYPSFINF  1113
             DY  FI F
Sbjct  330   DYKRFIKF  337


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7635  ICSRD  7621
             IC RD
Sbjct  349   ICARD  353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6894  LCVTISG  6874
             LCV I G
Sbjct  197   LCVQIAG  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3386  KEPIVG  3403
             KE IVG
Sbjct  269   KEQIVG  274


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1718  ELQVWGRD  1741
             ELQ+  RD
Sbjct  188   ELQISERD  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8871  EREVL  8885
             ER+VL
Sbjct  193   ERDVL  197


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7830  IMNNFIY  7810
             I NNF Y
Sbjct  325   IQNNFDY  331


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3531  YKQFI  3545
             YK FI
Sbjct  331   YKRFI  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5543  EELIR  5557
             E+LIR
Sbjct  547   EQLIR  551


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2735  LTTPDKK  2755
             L TP KK
Sbjct  590   LITPQKK  596


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  6274  GAERICIFL  6300
             G E +C FL
Sbjct  46    GPEQVCSFL  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 1/13 (7%)
 Frame = -2

Query  7638  QICSRDLL-LQLA  7603
             QI  RD L  Q A
Sbjct  190   QISERDVLCVQIA  202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6382  GLCND  6368
             GLC D
Sbjct  203   GLCHD  207


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7086  MGGAYIAFP  7060
             +GG Y  FP
Sbjct  150   LGGGYYVFP  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5251  LWGYLGR  5271
             LW Y GR
Sbjct  284   LWPYKGR  290


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 6/14 (42%)
 Frame = +3

Query  7872  YFL**IELGRDIHH  7913
             YF       RD HH
Sbjct  315   YF------ARDCHH  322


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6794  LKQI  6805
             LKQI
Sbjct  445   LKQI  448


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4583  DYGKQ  4597
             DYG Q
Sbjct  506   DYGMQ  510


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5371  QEMEPVD  5391
             QE  P+D
Sbjct  510   QEKNPID  516


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7113  FDEHLI  7096
             F E+LI
Sbjct  545   FAEQLI  550


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6518  GIRPV  6532
             GI PV
Sbjct  249   GIKPV  253


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/8 (37%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8204  QHYSLVPD  8181
             ++Y L+P+
Sbjct  255   EQYGLIPE  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6392  PLDRPV  6375
             PL+ PV
Sbjct  275   PLESPV  280


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  209  KGKPE  223
            KG PE
Sbjct  288  KGRPE  292


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3868  SSKRN  3882
             S KRN
Sbjct  302   SNKRN  306


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 24/41 (58%)
 Frame = +3

Query  1752  PQK---------QEPIDKELYPLTSLR--S-----LFGNDP  1826
             PQK         Q P        T LR  S     LF +DP
Sbjct  593   PQKKEWNDSTSVQNP--------TRLREASKSRVQLFKDDP  625


>pdb|3GHB|H  Chain H, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex 
With V3 Peptide W2rw020
 pdb|3GHB|I  Chain I, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex 
With V3 Peptide W2rw020
Length=235


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 6/20 (30%)
 Frame = -3

Query  8795  IWLNWY*LV--APSKG-QWI  8745
             +WLNW   V  AP KG +W+
Sbjct  32    VWLNW---VRQAPGKGLEWV  48


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -2

Query  6645  TDVFSCT----IMV  6616
             T V+SCT    IM+
Sbjct  93    TAVYSCTTDGFIMI  106


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  192   GLYSLSSV--VT  201


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  203   PSSSLGTQTYTCNV  216


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +1

Query  2032  TYTCQHNWKKS---VD  2070
             TYTC  N K S   VD
Sbjct  211   TYTCNVNHKPSNTKVD  226


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  185   PAVLQSS  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  71    TISRDDSKN  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  72    ISRDDSKNTL  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  697  TQDTAI  714
            T+DTA+
Sbjct  90   TEDTAV  95


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  184   FPAVLQSS  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  204   SSSLGTQTY  212


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3241  YYY  3233
             YYY
Sbjct  114   YYY  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  188   LQSSGL  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7886  NRVRQ  7900
             N VRQ
Sbjct  35    NWVRQ  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             Y C V H
Sbjct  212   YTCNVNH  218


>ref|NP_115960.2|  EGF-like module-containing mucin-like hormone receptor-like 3 
[Homo sapiens]
 sp|Q9BY15.2|EMR3_HUMAN  RecName: Full=EGF-like module-containing mucin-like hormone receptor-like 
3; AltName: Full=EGF-like module receptor 3; Contains: 
RecName: Full=EGF-like module-containing mucin-like 
hormone receptor-like 3 subunit alpha; Contains: RecName: Full=EGF-like 
module-containing mucin-like hormone receptor-like 
3 subunit beta; Flags: Precursor
Length=652

 GENE ID: 84658 EMR3 | egf-like module containing, mucin-like, hormone
receptor-like 3 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 23/53 (43%)
 Frame = +2

Query  3638  SELVNQII-----EQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGI---RKV  3772
             S L N II     E++ KK+ VYL           N QV   VSA I   R V
Sbjct  243   SSLGN-IINATFFEEMDKKDQVYL-----------NSQV---VSAAIGPKRNV  280


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4585  LWKTDGR  4605
             LW T+GR
Sbjct  148   LWRTEGR  154


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  7881  IESTAKTIL  7855
             I STA TIL
Sbjct  157   ISSTATTIL  165


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  5013  GSLQYLALAA  5042
             G L+YL LAA
Sbjct  424   GALHYLYLAA  433


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9072  FCLYW  9086
             FC YW
Sbjct  303   FCVYW  307


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3535  SNLSSFA  3555
             S LSSFA
Sbjct  336   SHLSSFA  342


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  370   CLLLAAL  376


 Score = 18.9 bits (37),  Expect(2) =  4956
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL GID
Sbjct  405   LFLVGID  411


 Score = 16.3 bits (31),  Expect(2) =  4956
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  449   RNLTVV  454


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4241  KELKKII  4261
             KEL KI+
Sbjct  130   KELQKIV  136


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/18 (38%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -1

Query  6061  FPHV-------KIFCHIY  6029
             F HV       K+FC +Y
Sbjct  290   FQHVKMTPSTKKVFC-VY  306


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 12/29 (41%)
 Frame = -2

Query  498  LMFLTGQ--D*LRIVLAPCLPILYVLIYI  418
            LM LT Q  D          P+L V  Y+
Sbjct  344  LMALTSQEED----------PVLTVITYV  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 8/21 (38%)
 Frame = -2

Query  6504  TVLTFVHGPVPLNV----LLL  6454
             TV T+V G   L V    LLL
Sbjct  357   TVITYV-G---LSVSLLCLLL  373


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +1

Query  2353  LLGSSIRNT-TS  2385
             LL   IRNT TS
Sbjct  379   LLCKAIRNTSTS  390


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1211  GFLWS  1197
             GF+WS
Sbjct  503   GFMWS  507


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  8908  RRLSNLHSNTS  8876
             R LS L S  S
Sbjct  532   RKLSSLNSEVS  542


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3029  LLESLCF  3009
             LL  LCF
Sbjct  6     LLPGLCF  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  417  FSFPL  403
            F FPL
Sbjct  58   FTFPL  62


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  479   VAISAAS  485


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  582   LFTII-NSL  589


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6275  VQKEY  6289
             VQK+Y
Sbjct  605   VQKQY  609


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1940  LSFLVSIF  1917
             L FL S F
Sbjct  10    LCFLLSLF  17


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7097  IRCS  7108
             IRCS
Sbjct  221   IRCS  224


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8907  LAFHHV  8924
             L F+HV
Sbjct  288   LTFQHV  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8279  CRAIR  8293
             C AIR
Sbjct  381   CKAIR  385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  283  PPLASC  266
            PP ASC
Sbjct  32   PPNASC  37


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  341   FAVLM  345


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1654  EGQIFP  1637
             EG +FP
Sbjct  640   EGDVFP  645


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3890  SCDKC  3904
             SC KC
Sbjct  27    SCAKC  31


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4869  YISFSS  4852
             +IS+SS
Sbjct  239   FISYSS  244


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  337   HLSSFA  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6727  CNKCSP  6710
             C KC P
Sbjct  28    CAKCPP  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2930  LCKLLRGT  2953
             LCK  R T
Sbjct  380   LCKAIRNT  387


>gb|AAY16610.1|  immunoglobulin kappa light chain [Homo sapiens]
Length=114


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 5/27 (18%)
 Frame = +2

Query  7004  DTITLPCRIKQIINMW-----QKVGKA  7069
             D +TL CR  Q + MW     QK GKA
Sbjct  14    DRVTLTCRASQSVRMWLAWYQQKPGKA  40


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  29    WLAWY  33


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  2     TQSPS  6


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5573  KLL-YQSS  5593
             KLL YQ S
Sbjct  42    KLLIYQAS  49


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3542  KLLVTQSSDL  3513
             KLL+ Q S L
Sbjct  42    KLLIYQASTL  51


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +3

Query  4812  ERDWHLGQGVSIE  4850
             +R W  GQG  +E
Sbjct  89    DRAWTFGQGTKVE  101


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2795  LHPD  2806
             LHPD
Sbjct  75    LHPD  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1481  IASLH  1467
             I SLH
Sbjct  72    ISSLH  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             V LTC
Sbjct  16    VTLTC  20


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             V LTC
Sbjct  16    VTLTC  20


>pdb|1Q1J|H  Chain H, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d 
In Complex With V3 Peptide
 pdb|1Q1J|I  Chain I, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d 
In Complex With V3 Peptide
 pdb|3C2A|H  Chain H, Antibody Fab Fragment 447-52d In Complex With Ug1033 
Peptide
 pdb|3C2A|I  Chain I, Antibody Fab Fragment 447-52d In Complex With Ug1033 
Peptide
Length=231


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 6/20 (30%)
 Frame = -3

Query  8795  IWLNWY*LV--APSKG-QWI  8745
             +WLNW   V  AP KG +W+
Sbjct  32    VWLNW---VRQAPGKGLEWV  48


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -2

Query  6645  TDVFSCT----IMV  6616
             T V+SCT    IM+
Sbjct  93    TAVYSCTTDGFIMI  106


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  192   GLYSLSSV--VT  201


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  203   PSSSLGTQTYTCNV  216


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +1

Query  2032  TYTCQHNWKKS---VD  2070
             TYTC  N K S   VD
Sbjct  211   TYTCNVNHKPSNTKVD  226


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  185   PAVLQSS  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  71    TISRDDSKN  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  72    ISRDDSKNTL  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  697  TQDTAI  714
            T+DTA+
Sbjct  90   TEDTAV  95


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  184   FPAVLQSS  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  204   SSSLGTQTY  212


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3241  YYY  3233
             YYY
Sbjct  114   YYY  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  188   LQSSGL  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7886  NRVRQ  7900
             N VRQ
Sbjct  35    NWVRQ  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             Y C V H
Sbjct  212   YTCNVNH  218


>sp|P09871.1|C1S_HUMAN  RecName: Full=Complement C1s subcomponent; AltName: Full=Complement 
component 1 subcomponent s; AltName: Full=C1 esterase; 
Contains: RecName: Full=Complement C1s subcomponent heavy 
chain; Contains: RecName: Full=Complement C1s subcomponent light 
chain; Flags: Precursor
Length=688

 GENE ID: 716 C1S | complement component 1, s subcomponent [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 10/24 (41%)
 Frame = +3

Query  4953  ALLGHIVSP----------RCEYQ  4994
             AL G I SP          RCEYQ
Sbjct  182   ALIGEIASPNYPKPYPENSRCEYQ  205


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -2

Query  4818  LF-LL---YADPNM  4789
             LF LL   YA+P M
Sbjct  6     LFSLLAWVYAEPTM  19


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8729  WCVVL  8715
             WC+VL
Sbjct  2     WCIVL  6


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4184  QEFGIPYN  4207
             +EF +PYN
Sbjct  97    EEFQVPYN  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3244  PYYY  3233
             PYYY
Sbjct  389   PYYY  392


 Score = 18.0 bits (35),  Expect(2) =  8820
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  7549  GDLGLL--W  7569
             GDLGL   W
Sbjct  562   GDLGLISGW  570


 Score = 15.9 bits (30),  Expect(2) =  8820
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7653  GWSGTEK  7673
             GW  TEK
Sbjct  569   GWGRTEK  575


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -3

Query  5900  QVPHNRL*PTIF  5865
             QVP N L   IF
Sbjct  100   QVPYNKL-QVIF  110


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6422  NNVWE  6408
             N VWE
Sbjct  301   NSVWE  305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  471  VNPG--LLETSEG  503
            + PG  LLE  EG
Sbjct  510  IHPGWKLLEVPEG  522


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2391  PAGCGIP  2371
             P  CGIP
Sbjct  356   PVDCGIP  362


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  172  IFHTD  158
            IF+TD
Sbjct  271  IFQTD  275


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             AL RLK
Sbjct  531   ALVRLK  536


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80   ALLRLK  63
            AL RLK
Sbjct  531  ALVRLK  536


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2053  NYVD  2042
             NYVD
Sbjct  670   NYVD  673


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5922  LYFVH  5936
             LYF H
Sbjct  52    LYFTH  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3985  KSYPGSSSC  4011
             K YP  S C
Sbjct  194   KPYPENSRC  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3398  VGAETFY  3418
             VGA  FY
Sbjct  332   VGATSFY  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6646  YRCVQLYYY  6620
             Y C + YYY
Sbjct  384   YTCEEPYYY  392


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4385  IATDI  4399
             +ATDI
Sbjct  128   VATDI  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1971  SMIRY  1985
             S IRY
Sbjct  380   SVIRY  384


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -3

Query  8333  KSFPSPVLFF  8304
             K FP  V FF
Sbjct  447   KNFPWQV-FF  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3845  SDFNL  3859
             SD+NL
Sbjct  555   SDYNL  559


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6097  DYILM  6083
             DY LM
Sbjct  556   DYNLM  560


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4271  RDQAEHLKTA  4300
             RD A  LK A
Sbjct  576   RDRAVRLKAA  585


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6017  LVGWG  6003
             LV WG
Sbjct  652   LVSWG  656


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4348  WGVQC  4362
             WG QC
Sbjct  655   WGPQC  659


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  505  VDKYWD  522
            V+K WD
Sbjct  36   VEKSWD  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8985  VPCSKLDV  8962
             VP  KL V
Sbjct  101   VPYNKLQV  108


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3198  NCFTSLV  3178
             NC  SLV
Sbjct  233   NCLDSLV  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  9044  GSPLPSPAQATP  9009
             G P+P P + TP
Sbjct  289   GDPMPCPKEDTP  300


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  4833  DPNASLF  4813
             DP   LF
Sbjct  372   DPESTLF  378


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8298  MWRIAL  8281
             MW I L
Sbjct  1     MWCIVL  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3068  LIAEI  3082
             LI EI
Sbjct  183   LIGEI  187


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2715  CLSSSIFV  2692
             CL S +FV
Sbjct  234   CLDSLVFV  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8261  EVVQG  8275
             EVV+G
Sbjct  326   EVVEG  330


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  915  VPPLCL  898
            V P CL
Sbjct  545  VSPICL  550


>sp|O14802.2|RPC1_HUMAN  RecName: Full=DNA-directed RNA polymerase III subunit RPC1; Short=RNA 
polymerase III subunit C1; AltName: Full=DNA-directed 
RNA polymerase III subunit A; AltName: Full=DNA-directed 
RNA polymerase III largest subunit; AltName: Full=RNA polymerase 
III 155 kDa subunit; Short=RPC155; AltName: Full=RNA polymerase 
III subunit C160
Length=1390

 GENE ID: 11128 POLR3A | polymerase (RNA) III (DNA directed) polypeptide A,
155kDa [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 7/31 (22%)
 Frame = +2

Query  7010  ITL--PCRIKQIINMWQKVGKAMYAPPISGQ  7096
             ITL  P RIK+IIN      KA   P I  Q
Sbjct  1063  ITLGVP-RIKEIIN----ASKAISTPIITAQ  1088


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -2

Query  939  LTFAWLLDVPPLC  901
            LT   LL VPPLC
Sbjct  252  LT--RLL-VPPLC  261


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = +2

Query  6140  PLC-----VSLKCTDLKNDTN  6187
             PLC     VS    DLK  TN
Sbjct  259   PLCIRPSVVS----DLKSGTN  275


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2164  MAIDRR  2181
             M IDRR
Sbjct  1280  MSIDRR  1285


 Score = 19.7 bits (39),  Expect(2) =  1398
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  4767  PLVGCVLLNLF  4735
             PLV    LNLF
Sbjct  220   PLV---VLNLF  227


 Score = 17.6 bits (34),  Expect(2) =  1398
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4858  FLHSMET  4838
             FL+S ET
Sbjct  193   FLQSFET  199


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  384  PIDLILPRL  358
            P DLIL RL
Sbjct  247  PSDLILTRL  255


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8601  DLQLPC  8584
             DL+LPC
Sbjct  87    DLELPC  92


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3940  VYLSMHGFS  3914
             VYLS  GFS
Sbjct  689   VYLSNRGFS  697


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  8264  VVQG---ACRAIRHI  8299
             VVQG     RA+ HI
Sbjct  1200  VVQGIPEVSRAVIHI  1214


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1674  NFLQS  1688
             NFLQS
Sbjct  192   NFLQS  196


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  1424  QNSCLMAGS  1398
             QNS LM GS
Sbjct  641   QNSELMSGS  649


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7863  TILKP  7849
             TILKP
Sbjct  587   TILKP  591


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6255  LILKE  6241
             LILKE
Sbjct  751   LILKE  755


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6604  REIDRSN  6584
             RE D SN
Sbjct  769   RELDKSN  775


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2418  TVTDFFF  2398
             T T+FFF
Sbjct  843   TPTEFFF  849


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5819  ISTPI  5805
             ISTPI
Sbjct  1080  ISTPI  1084


 Score = 17.6 bits (34),  Expect(2) =  9851
 Identities = 6/19 (31%), Positives = 9/19 (47%), Gaps = 9/19 (47%)
 Frame = +2

Query  2645  MDD---------LYVGSDL  2674
             M+D         LY+ S+L
Sbjct  307   MEDWDFLQLQCALYINSEL  325


 Score = 15.5 bits (29),  Expect(2) =  9851
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2758  SERTSIPLD  2784
             SE   IPL+
Sbjct  323   SELSGIPLN  331


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  163  CGKSLA  180
            CGK LA
Sbjct  72   CGKNLA  77


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  484  RPGLT  470
            RPGLT
Sbjct  131  RPGLT  135


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6915  FSTVIQHN  6938
             F T I+HN
Sbjct  197   FETAIEHN  204


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  528  VAVPVFV  508
            VAVPV V
Sbjct  380  VAVPVHV  386


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1919  FLANSF  1902
             F ANSF
Sbjct  833   FVANSF  838


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7246  TIRSST  7263
             T+RSST
Sbjct  889   TVRSST  894


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3221  TTESI  3235
             TTESI
Sbjct  948   TTESI  952


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8284  STSSLYY  8264
             S SS+YY
Sbjct  1181  SKSSMYY  1187


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3068  LIAEIQ  3085
             LIA IQ
Sbjct  538   LIAAIQ  543


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1127  SFINFS  1110
             SFIN S
Sbjct  788   SFINIS  793


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4861  FFLHSM  4844
             FF H M
Sbjct  847   FFFHTM  852


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8259  ITLSVP  8242
             ITL VP
Sbjct  1063  ITLGVP  1068


 Score = 15.9 bits (30),  Expect(2) = 16597
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8050  AEPVPLQL  8073
             AE VPL L
Sbjct  232   AEDVPLLL  239


 Score = 15.9 bits (30),  Expect(2) = 16597
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  8096  LIVTRIVELL  8125
             LI TR   LL
Sbjct  250   LILTR---LL  256


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2702  EELRQH  2719
             EE+RQ+
Sbjct  26    EEMRQQ  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5455  CKKCC  5469
             CK CC
Sbjct  109   CKTCC  113


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3998  VAVHVA  4015
             V VHVA
Sbjct  382   VPVHVA  387


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8662  KISLIC  8679
             KIS IC
Sbjct  14    KISHIC  19


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2194  ISRNLY  2211
             +S NLY
Sbjct  37    VSKNLY  42


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  520  PSICLQPSDVSN  485
            P  C  PS VS+
Sbjct  258  PPLCIRPSVVSD  269


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8956  FLKY  8945
             FLKY
Sbjct  431   FLKY  434


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1232  PVYIVSKGF  1206
             PVY    GF
Sbjct  688   PVYLSNRGF  696


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  4016  SGYIEAEV  4039
             S YIE EV
Sbjct  1114  SEYIE-EV  1120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7114  YYRAAI  7131
             Y+RA I
Sbjct  97    YFRAVI  102


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -3

Query  236  VE----RA-----PLVSLSL  204
            VE    RA     PLV L L
Sbjct  207  VEPLLGRAQENLNPLVVLNL  226


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4708  DITMK  4722
             D TMK
Sbjct  278   DLTMK  282


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4510  TFPE  4499
             TFPE
Sbjct  391   TFPE  394


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2177  EEKIK  2191
             +EKIK
Sbjct  576   DEKIK  580


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2327  RELNK  2341
             REL+K
Sbjct  769   RELDK  773


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  9002  KVPSGKSLVASS  8967
             K P  K  VA S
Sbjct  826   KLPAAKGFVANS  837


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1203  KEPFRD  1220
             KE FR+
Sbjct  3     KEQFRE  8


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4557  QEEK  4568
             QEEK
Sbjct  119   QEEK  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7060  RKSNVC  7077
             RK N+C
Sbjct  151   RKKNIC  156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -3

Query  1598  VS-FLSTFPTA  1569
             VS FL  F TA
Sbjct  190   VSNFLQSFETA  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1640  EDLAFLQ  1660
             ED  FLQ
Sbjct  308   EDWDFLQ  314


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3728  FLQFLCVL  3705
             FLQ  C L
Sbjct  312   FLQLQCAL  319


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4693  LAFPE  4679
             L FPE
Sbjct  390   LTFPE  394


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6352  CQLIA  6338
             CQ IA
Sbjct  565   CQIIA  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  7382  TVQARQLLSG  7411
             T+Q  +L+SG
Sbjct  639   TIQNSELMSG  648


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1425  AEAMS  1439
             A+AMS
Sbjct  677   ADAMS  681


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4003  CYQDNF  3986
             C QD F
Sbjct  960   CCQDSF  965


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1114  KFIK  1125
             KFIK
Sbjct  971   KFIK  974


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8681  PQIKDI  8664
             P IK+I
Sbjct  1068  PRIKEI  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5279  AIIRILQ  5299
             A+I ILQ
Sbjct  100   AVIGILQ  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8959  QFLKY  8945
             QFL Y
Sbjct  124   QFLDY  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4229  ESMNKELK  4252
             E M  ELK
Sbjct  438   EKMAQELK  445


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/16 (43%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +2

Query  845  HVFSII-RRS--HPTR  883
            ++FS+I R S   P R
Sbjct  599  QIFSVILRPSDDNPVR  614


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1517  IETLN  1503
             IE LN
Sbjct  728   IEALN  732


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5487  FHNKSLRH  5510
             F N SL H
Sbjct  813   FENRSLPH  820


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5828  MLLGMLM  5848
             MLL  LM
Sbjct  1288  MLLSDLM  1294


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3705  QHTKELE  3725
             +H KE E
Sbjct  202   EHNKEVE  208


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2498  INNETPGI  2521
             IN E  GI
Sbjct  321   INSELSGI  328


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7247  PLGVAPTK  7270
             PL  AP K
Sbjct  329   PLNMAPKK  336


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8997  DFPGR  9011
             DF GR
Sbjct  362   DFSGR  366


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1609  IVLRD  1623
             I LRD
Sbjct  666   ILLRD  670


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5460  FTIAIG  5443
             F I IG
Sbjct  696   FSIGIG  701


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1491  QRKIVK  1508
             QR  VK
Sbjct  872   QRRLVK  877


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2934  VNSLEE  2951
             V SLE+
Sbjct  876   VKSLED  881


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  939   KETIN  953
             KE IN
Sbjct  1071  KEIIN  1075


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  152   LLVSVENL  175
             LLV  +NL
Sbjct  1225  LLVEGDNL  1232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6897  LIVEGN  6914
             L VEG+
Sbjct  1225  LLVEGD  1230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4800  LHTGERD  4820
             LH  +RD
Sbjct  1363  LHKADRD  1369


>ref|NP_055615.8|  engulfment and cell motility protein 1 isoform 1 [Homo sapiens]
Length=727

 GENE ID: 9844 ELMO1 | engulfment and cell motility 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.8 bits (58),  Expect =    16
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 6/25 (24%)
 Frame = +2

Query  6887  TH--SFNCGGEFFYCNSTQLFNSTW  6955
             TH  SF    EFF C   QL N TW
Sbjct  447   THDRSFE---EFF-CICIQLLNKTW  467


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  4569  QRSLGIME  4592
             QRSL I+E
Sbjct  199   QRSLAILE  206


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  6191  NSSSGRMIMEK  6223
             N SSG   MEK
Sbjct  339   NNSSGS--MEK  347


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 1/15 (6%)
 Frame = +2

Query  7664  DREINNYT-SLIHSL  7705
             D EI  YT   I  L
Sbjct  236   DQEIQTYTIAVINAL  250


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4839  VSIEW  4853
             V IEW
Sbjct  10    VAIEW  14


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  260  ALQQAES  240
            ALQ+A+S
Sbjct  50   ALQHADS  56


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  8972  SSMSAVLEVL  8943
             SSM A LE L
Sbjct  95    SSMDAKLEAL  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8449  TWKNM  8463
             TWK M
Sbjct  466   TWKEM  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = +3

Query  846  MFSALSEGATPQDLNTML  899
            M S L    T  DL+T+L
Sbjct  677  MMSDL----TRNDLDTLL  690


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7449  SIALSKLFC  7423
             SI L K+ C
Sbjct  417   SIELTKMLC  425


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5784  SFTLIA  5767
             SFTL A
Sbjct  156   SFTLTA  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 10/25 (40%)
 Frame = +3

Query  870  ATPQDLNTMLNTVGGHQAAMQMLKE  944
            AT +D N            MQ  KE
Sbjct  472  ATSEDFNKV----------MQVVKE  486


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4721  KPSSKNKFRS  4750
             KPSS + F S
Sbjct  495   KPSSLDQFKS  504


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +2

Query  179  QWRPNRDLKAKGKPE--EL  229
            Q RP  +LK K  PE  EL
Sbjct  529  QSRPILELKEKIQPEILEL  547


 Score = 15.9 bits (30),  Expect(2) = 26020
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7690  LNTLL  7704
             L+TLL
Sbjct  686   LDTLL  690


 Score = 15.5 bits (29),  Expect(2) = 26020
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7633  DLESHDLD  7656
             DL   DLD
Sbjct  680   DLTRNDLD  687


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  2042  VNIIGRNLLTQ  2074
             +N  G  LLTQ
Sbjct  121   INLDGISLLTQ  131


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5279  AI-IRILQ  5299
             AI I ILQ
Sbjct  192   AIDISILQ  199


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2498  INNE  2509
             INNE
Sbjct  286   INNE  289


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  6896  NCALQFLGP  6870
             NC L F  P
Sbjct  649   NCQLNFIAP  657


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  851  KHGYHFWAESL  819
            KH Y  W + L
Sbjct  659  KHEYCIWTDGL  669


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4562  RKAKIIRDY  4588
             RK    RDY
Sbjct  348   RKSMYTRDY  356


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 14/26 (53%)
 Frame = +2

Query  4211  QSQGVVESMNK---------ELK-KI  4258
             QS    E MN          ELK KI
Sbjct  519   QS----ERMNQEDFQSRPILELKEKI  540


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7176  DLEE  7187
             DLEE
Sbjct  590   DLEE  593


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +2

Query  4529  QDN---SDIKVV  4555
             QD     DIK V
Sbjct  605   QDKLPVADIKAV  616


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1198  DQRNPL  1215
             DQ  PL
Sbjct  25    DQKKPL  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7493  QLQARI  7510
             QL+ RI
Sbjct  87    QLHERI  92


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6045  FSVTF  6031
             FSV F
Sbjct  176   FSVAF  180


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7490  KQLQARIL  7513
             KQL   IL
Sbjct  269   KQLRSIIL  276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  468  RIVL  457
            RIVL
Sbjct  397  RIVL  400


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6828  NCSLNLLA  6805
             NC LN  A
Sbjct  649   NCQLNFIA  656


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5171  LEELKN  5188
             LE LK+
Sbjct  101   LEALKD  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7751  IILVH  7737
             IIL H
Sbjct  274   IILTH  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  6964  TIKPSTIKQ  6938
             T KPS   Q
Sbjct  493   TTKPSSLDQ  501


>emb|CAR62613.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=122


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +2

Query  2351  DFWEVQLGIPHP  2386
             D+WE QL  PHP
Sbjct  112   DYWEAQL-FPHP  122


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8288  IRHIPRRIRQGLE  8326
             +R+ PR   QGLE
Sbjct  37    VRQAPR---QGLE  46


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4784  YYQSS  4770
             YY+SS
Sbjct  102   YYESS  106


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7282  SGAERKK  7302
             SGAE KK
Sbjct  7     SGAEVKK  13


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  1170  GYTFLLFYL  1144
             GYTF  +Y+
Sbjct  26    GYTFTTYYM  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6025  YYFLWV  6008
             YY  WV
Sbjct  32    YYMHWV  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8175  YCRRFHQY  8152
             YC R H Y
Sbjct  95    YCARVHRY  102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1654  EGQIFP  1637
             E Q FP
Sbjct  115   EAQLFP  120


>sp|O15357.2|SHIP2_HUMAN  RecName: Full=Phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase 
2; AltName: Full=SH2 domain-containing inositol-5'-phosphatase 
2; Short=SH2 domain-containing inositol phosphatase 
2; Short=SHIP-2; AltName: Full=Inositol polyphosphate phosphatase-like 
protein 1; Short=INPPL-1; AltName: Full=Protein 
51C
Length=1258

 GENE ID: 3636 INPPL1 | inositol polyphosphate phosphatase-like 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 5/30 (16%)
 Frame = +2

Query  7472  LTV-WGIKQLQA--RILA-VERYLKDQQLL  7549
             L V W   QL     ILA +E YL DQ+LL
Sbjct  794   LKVQWSSRQLPTLKPILADIE-YLQDQHLL  822


 Score = 24.4 bits (50),  Expect =   168
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = -2

Query  4809  LYADPNM-----LLLPI  4774
             LYA PN      LLLP+
Sbjct  101   LYAQPNQGLVCALLLPV  117


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  1692  PE-PTAPPEES  1721
             PE PTAP  ES
Sbjct  163   PETPTAPAAES  173


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1483  LGTKERL  1503
             LGT ERL
Sbjct  879   LGTRERL  885


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  2777  GMEVLSDVF  2751
             G+E+LS VF
Sbjct  228   GLEILSKVF  236


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8529  EEEVGFPVT  8555
             EEE+ FP T
Sbjct  652   EEEISFPPT  660


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  9041  SPLPSPAQATPP  9006
             SPLP P   T P
Sbjct  158   SPLPAPETPTAP  169


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +3

Query  243  LGLLKRAR--QEARGGDW  290
            L LL R R  QE    DW
Sbjct  343  LVLLRRQRDSQE----DW  356


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +3

Query  528  QPSL-QTGSEELRSL  569
            Q  L QTG +EL SL
Sbjct  250  QQNLPQTGEQELESL  264


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5365  GEQEME  5382
             GEQE+E
Sbjct  257   GEQELE  262


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  811  TTFTH  797
            TTFTH
Sbjct  357  TTFTH  361


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6697  PERTRESI  6720
             P R RESI
Sbjct  1170  PPRIRESI  1177


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -1

Query  9031  PVPPR--PRLPGKSPAESPL  8978
             P PPR  PR       E PL
Sbjct  945   PAPPRAAPR-------EEPL  957


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  9049  DPAYKQLL  9072
             DPA K LL
Sbjct  1243  DPAHKRLL  1250


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1947  LEVLSK  1964
             LE+LSK
Sbjct  229   LEILSK  234


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5135  QREPHNEWT  5161
             QR+ + +WT
Sbjct  349   QRDSQEDWT  357


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  7792  HNKLAVVY  7815
             +NKL VV+
Sbjct  374   QNKLGVVF  381


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  1580  MWKGRTPNERL  1612
             M K R P ERL
Sbjct  870   M-KVRVPTERL  879


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6458  YYILE  6444
             YY+LE
Sbjct  986   YYVLE  990


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5243  YETYGD  5260
             YE YG+
Sbjct  831   YESYGE  836


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5380  EPVDPRLEP  5406
             EP  PRL P
Sbjct  955   EPLTPRLKP  963


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1769  RLLLLR  1752
             RL LLR
Sbjct  342   RLVLLR  347


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6563  DCHLT  6549
             +CHLT
Sbjct  559   NCHLT  563


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 8/24 (33%)
 Frame = +1

Query  8956  TADIELATRD----FPLGTFQGGV  9015
             T DI   T D    F  GTF+ GV
Sbjct  710   TDDI--VTSDHSPVF--GTFEVGV  729


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  441  WASREL  458
            W SR+L
Sbjct  798  WSSRQL  803


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7391  PVPSA  7377
             PVPSA
Sbjct  1008  PVPSA  1012


 Score = 16.3 bits (31),  Expect(2) = 17374
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6268  SYACAD  6251
             SY C D
Sbjct  706   SYGCTD  711


 Score = 15.5 bits (29),  Expect(2) = 17374
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6405  GSKDTF  6388
             GS DT+
Sbjct  666   GSRDTY  671


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1216  LKGSFG  1199
             LKGS+G
Sbjct  186   LKGSYG  191


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  3770  VL--FLDGIDK  3796
             VL  FL GI K
Sbjct  270   VLKDFLSGIQK  280


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4562  RKAKII  4579
             RKAK I
Sbjct  302   RKAKTI  307


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 5/22 (22%)
 Frame = -3

Query  3164  FLHIFLFSDF*MALD-KFDMSI  3102
             F H F F D    L+   DM I
Sbjct  599   FTHLFWFGD----LNYRLDMDI  616


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8247  VPSAT  8233
             VPSAT
Sbjct  1009  VPSAT  1013


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5224  WLRA  5235
             WLRA
Sbjct  1204  WLRA  1207


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  5839  PKEHGAPS-PP-PSP  5801
             PK H  P  PP PSP
Sbjct  1091  PKAHPRPPLPPGPSP  1105


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3092  PASVFL  3075
             PAS FL
Sbjct  1105  PASTFL  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = +1

Query  8044  RSAE-PVPLQL-PP  8079
             RSA  P PL+L PP
Sbjct  1142  RSALLPGPLELQPP  1155


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1177  LVGLY  1163
             L+GLY
Sbjct  98    LIGLY  102


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = +1

Query  187  PEQG-------P-ESERE  216
            P QG       P E ERE
Sbjct  105  PNQGLVCALLLPVEGERE  122


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5812  PPSPQ  5798
             PP PQ
Sbjct  294   PPAPQ  298


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4696  PLAFP  4682
             PL FP
Sbjct  1165  PLSFP  1169


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7263  PPRQRE  7280
             PPR RE
Sbjct  1170  PPRIRE  1175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7025  RIKQII  7042
             RI Q I
Sbjct  363   RIRQLI  368


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +1

Query  2833  ARKR----QL  2850
             ARKR    QL
Sbjct  398   ARKREAFCQL  407


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7805  LWYIK  7819
             LW IK
Sbjct  505   LWNIK  509


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7670  EINNYTS  7690
             EI NY S
Sbjct  618   EILNYIS  624


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1245  EFYRT  1231
             EFY T
Sbjct  768   EFYST  772


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5334  RHSRIG  5351
             RH R+G
Sbjct  1030  RHPRVG  1035


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1640  EDLAFL  1657
             +DL FL
Sbjct  1223  DDLEFL  1228


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9031  PVPPR  9017
             P PPR
Sbjct  140   PLPPR  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  6621  MVLALSVKLTD  6589
             +VL LSV L D
Sbjct  264   LVLKLSV-LKD  273


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  3062  KDLIAEIQK  3088
             KD    IQK
Sbjct  272   KDFLSGIQK  280


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2552  IPVEA  2538
             IPV+A
Sbjct  307   IPVQA  311


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3245  GKTPKFKL  3268
             GK  KF L
Sbjct  327   GKSQKFTL  334


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1025  FSHLAW  1008
             F HL W
Sbjct  599   FTHLFW  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4687  FPETYI  4670
             +PET I
Sbjct  697   YPETHI  702


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2246  QFLKF  2232
             QFL F
Sbjct  851   QFLTF  855


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5752  RAEDSGN  5772
             R E+ GN
Sbjct  859   RGEETGN  865


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4354  PPNPP  4340
             PP PP
Sbjct  998   PPEPP  1002


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7910  PLSF  7921
             PLSF
Sbjct  1165  PLSF  1168


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3298  VDRVL  3312
             VD VL
Sbjct  222   VDKVL  226


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  3351  VLTNSHSGIQ  3322
             VL +  SGIQ
Sbjct  270   VLKDFLSGIQ  279


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1095  DYLSSI  1078
             D+LS I
Sbjct  273   DFLSGI  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/23 (34%), Positives = 9/23 (39%), Gaps = 12/23 (52%)
 Frame = +1

Query  3214  KNNHRKH------S------NMG  3246
             KN H K+      S      NMG
Sbjct  412   KNKHSKQDEPDMISVFIGTWNMG  434


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4687  FPETY  4673
             FP TY
Sbjct  657   FPPTY  661


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  292  EYAKNFD  312
            EY K F+
Sbjct  776  EYKKSFE  782


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  343  RERQY  357
            RER Y
Sbjct  882  RERLY  886


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             I ID D
Sbjct  889   ISIDKD  894


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  531  PSLQTGSEELRS  566
            PS   GS+E RS
Sbjct  903  PSVSRGSQEPRS  914


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  258  RARQEARGG  284
            R  QE R G
Sbjct  907  RGSQEPRSG  915


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  415   FFPPGLN  395
             F PP L+
Sbjct  1064  FLPPSLD  1070


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7357  YGRSL  7371
             YGR L
Sbjct  1162  YGRPL  1166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8300  PRRIRQ  8317
             P RIR+
Sbjct  1170  PPRIRE  1175


>ref|NP_690611.1|  tumor necrosis factor receptor superfamily member 6 isoform 3 
precursor [Homo sapiens]
Length=220

 GENE ID: 355 FAS | Fas (TNF receptor superfamily, member 6) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  6644  VEINCTRPNN  6673
             VEINCTR  N
Sbjct  115   VEINCTRTQN  124


 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 5/24 (20%)
 Frame = -1

Query  5881  CDPQFFCSTTDHQH--P--K-EHG  5825
             C P FFC  T  +H  P  K EHG
Sbjct  129   CKPNFFCNSTVCEHCDPCTKCEHG  152


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -2

Query  4791  MLLLPI*HPLV  4759
             +LLLPI  PL+
Sbjct  179   LLLLPI--PLI  187


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6917  FYCNST  6934
             F+CNST
Sbjct  133   FFCNST  138


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -3

Query  6032  LPILLLVGWGLWVHR  5988
             LPI L V    WV R
Sbjct  182   LPIPLIV----WVKR  192


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PLVL S
Sbjct  7     LL---PLVLTS  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7544  LLGIW  7558
             +LGIW
Sbjct  1     MLGIW  5


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2810  WTVQPIVL  2833
             WT  P VL
Sbjct  5     WTLLPLVL  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3563  GLEVNI  3580
             GLEV I
Sbjct  112   GLEVEI  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5158  PFIVW  5144
             P IVW
Sbjct  185   PLIVW  189


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2058  LPIMLTGV  2035
             LP  LT V
Sbjct  8     LPLVLTSV  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7489  DAPDC  7475
             D PDC
Sbjct  78    DEPDC  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5572  DESDC  5558
             DE DC
Sbjct  78    DEPDC  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  5435  LLVPIA-IV  5458
             LL PI  IV
Sbjct  180   LLLPIPLIV  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2266  IVWI  2255
             IVW+
Sbjct  187   IVWV  190


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2753  KHQKE  2767
             KH KE
Sbjct  201   KHRKE  205


>ref|NP_690610.1|  tumor necrosis factor receptor superfamily member 6 isoform 2 
precursor [Homo sapiens]
Length=314

 GENE ID: 355 FAS | Fas (TNF receptor superfamily, member 6) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  6644  VEINCTRPNN  6673
             VEINCTR  N
Sbjct  115   VEINCTRTQN  124


 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 5/24 (20%)
 Frame = -1

Query  5881  CDPQFFCSTTDHQH--P--K-EHG  5825
             C P FFC  T  +H  P  K EHG
Sbjct  129   CKPNFFCNSTVCEHCDPCTKCEHG  152


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6917  FYCNST  6934
             F+CNST
Sbjct  133   FFCNST  138


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PLVL S
Sbjct  7     LL---PLVLTS  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7544  LLGIW  7558
             +LGIW
Sbjct  1     MLGIW  5


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2810  WTVQPIVL  2833
             WT  P VL
Sbjct  5     WTLLPLVL  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3563  GLEVNI  3580
             GLEV I
Sbjct  112   GLEVEI  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1479  NFRNQ  1493
             NFRN+
Sbjct  305   NFRNE  309


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  7133  TRDGGNSN--NE  7162
             T D  NSN  NE
Sbjct  298   TSDSENSNFRNE  309


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2058  LPIMLTGV  2035
             LP  LT V
Sbjct  8     LPLVLTSV  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7489  DAPDC  7475
             D PDC
Sbjct  78    DEPDC  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5572  DESDC  5558
             DE DC
Sbjct  78    DEPDC  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3506  DTTNQKTEL  3532
             DT  QK +L
Sbjct  248   DTAEQKVQL  256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2334  LIRELK  2351
             LI +LK
Sbjct  273   LIKDLK  278


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2253  KIHTI  2267
             KI+TI
Sbjct  288   KIQTI  292


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2753  KHQKE  2767
             KH KE
Sbjct  180   KHRKE  184


>ref|NP_009195.1|  G-protein coupled receptor 182 [Homo sapiens]
 sp|O15218.1|GP182_HUMAN  RecName: Full=G-protein coupled receptor 182
 emb|CAA73910.1|  G-protein coupled receptor [Homo sapiens]
Length=404

 GENE ID: 11318 GPR182 | G protein-coupled receptor 182 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 5/17 (29%)
 Frame = +3

Query  4899  QLIHLYYF-----DCFS  4934
             +L+HL YF     DCFS
Sbjct  293   HLVHLLYFFYDVIDCFS  309


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = +3

Query  4113  YILTMA----AISPVLRLGPPV  4166
             YIL MA     I  VL L  PV
Sbjct  91    YILNMAIADLGI--VLSL--PV  108


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  8272  LYYFYNPI  8249
             LY+FY+ I
Sbjct  298   LYFFYDVI  305


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  7913  LSFQTH--LP  7936
             LSFQ H  LP
Sbjct  381   LSFQAHHLLP  390


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -3

Query  4712  MSIKPS----PS  4689
             MS+KPS    PS
Sbjct  1     MSVKPSWGPGPS  12


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  615  SLSFDAH  595
            SLSF AH
Sbjct  380  SLSFQAH  386


 Score = 20.2 bits (40),  Expect(2) =  3040
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  6088  LMHL---FYHVI  6062
             L HL   FY VI
Sbjct  294   LVHLLYFFYDVI  305


 Score = 16.3 bits (31),  Expect(2) =  3040
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  6241  AVFYLSFLHYH  6209
             AVF +  L YH
Sbjct  265   AVFVMCWLPYH  275


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 6/15 (40%)
 Frame = -2

Query  4434  IFVICFCNSLVCMSV  4390
             IF   F   LVC+SV
Sbjct  141   IF---F---LVCLSV  149


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -3

Query  6146  RVGL----ILHMA---LG  6114
             R GL    IL MA   LG
Sbjct  84    RAGLMNLYILNMAIADLG  101


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  8232  AMAVALS  8212
             A+AVALS
Sbjct  215   ALAVALS  221


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6816  NLLAIC  6799
             NLL IC
Sbjct  71    NLLVIC  76


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 14/28 (50%)
 Frame = -1

Query  2626  VWILFSKRL*DFCHATLEYCW*SFPSLW  2543
             VW L           TL+Y W     LW
Sbjct  108   VWML---------EVTLDYTW-----LW  121


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 6/21 (28%)
 Frame = -2

Query  3807  SSWALSIPSKNST----FLIP  3757
             S WAL +    ST    FL P
Sbjct  212   STWALAVA--LSTTILGFLLP  230


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/23 (34%), Positives = 10/23 (43%), Gaps = 11/23 (47%)
 Frame = -2

Query  315  LVKIFGVLT-----------SRR  280
            L+ +F VLT           SRR
Sbjct  233  LITVFNVLTACRLRQPGQPKSRR  255


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 9/22 (40%)
 Frame = -3

Query  848  HGYHFWAESL------LFYYFY  801
            HG H    SL      L Y+FY
Sbjct  284  HGTHI---SLHCHLVHLLYFFY  302


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -1

Query  1192  LMSRMLVGLYIL  1157
             LM      LYIL
Sbjct  87    LMN-----LYIL  93


 Score = 17.2 bits (33),  Expect(2) = 13027
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8280  VELFATYL  8303
             V LFA YL
Sbjct  54    VVLFALYL  61


 Score = 16.3 bits (31),  Expect(2) = 13027
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8274  ELVELF  8291
             EL +LF
Sbjct  31    ELLDLF  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3811  MFILGLI  3791
             MF+ GL+
Sbjct  63    MFVVGLV  69


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1630  LACLSV  1613
             L CLSV
Sbjct  144   LVCLSV  149


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 10/21 (47%)
 Frame = -3

Query  2846  CLFLA--------AL*AV-LS  2811
             CLF+A        AL AV LS
Sbjct  202   CLFMAPFETYSTWAL-AVALS  221


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  710  QSGQPK  727
            Q GQPK
Sbjct  247  QPGQPK  252


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7511  LAVERY  7528
             L V+RY
Sbjct  147   LSVDRY  152


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4822  GIWV  4833
             GIWV
Sbjct  176   GIWV  179


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/23 (34%), Positives = 9/23 (39%), Gaps = 9/23 (39%)
 Frame = -2

Query  4398  MSVAIMSTILSPALYPPIPPFLL  4330
             + VA   TIL          FLL
Sbjct  216   LAVALSTTILG---------FLL  229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  8199  VLLACSMPQP  8228
             VL AC + QP
Sbjct  239   VLTACRLRQP  248


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6701  RGPGRA  6718
             RG GRA
Sbjct  80    RGSGRA  85


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2505  LFILGM  2488
             L+IL M
Sbjct  90    LYILNM  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7542  SSWGFGVAL  7568
             S W   VAL
Sbjct  212   STWALAVAL  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7829  MIVGGLV  7849
             M V GLV
Sbjct  63    MFVVGLV  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2564  VILSIPV  2544
             ++LS PV
Sbjct  102   IVLSLPV  108


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1860  SFSC  1849
             SFSC
Sbjct  123   SFSC  126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  1155  VRMYSPTSI  1181
             V MYS  SI
Sbjct  135   VNMYS--SI  141


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5243  RYVAL  5229
             RYV L
Sbjct  151   RYVTL  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -3

Query  9092  RDPVQAKSS--CL  9060
             R P Q KS   CL
Sbjct  246   RQPGQPKSRRHCL  258


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3646  SQSNNRAV  3669
             SQS  R V
Sbjct  48    SQSTKRVV  55


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  927  WLLDV  913
            W+L+V
Sbjct  109  WMLEV  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6416  VWELAQRIPL  6387
             +W L   IPL
Sbjct  177   IWVLSAIIPL  186


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = +3

Query  2769  LHSFGWVMNSILIN  2810
             LH    V N IL N
Sbjct  311   LHC---VINPILYN  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1128  IFYKFL  1111
             I Y FL
Sbjct  318   ILYNFL  323


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6513  HMELGQ  6530
             H EL Q
Sbjct  44    HVELSQ  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3536  AIYLAL  3553
             A YLA+
Sbjct  58    ALYLAM  63


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3220  YFLHCL  3203
             +FL CL
Sbjct  142   FFLVCL  147


>ref|NP_000034.1|  tumor necrosis factor receptor superfamily member 6 isoform 1 
precursor [Homo sapiens]
Length=335

 GENE ID: 355 FAS | Fas (TNF receptor superfamily, member 6) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  6644  VEINCTRPNN  6673
             VEINCTR  N
Sbjct  115   VEINCTRTQN  124


 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 5/24 (20%)
 Frame = -1

Query  5881  CDPQFFCSTTDHQH--P--K-EHG  5825
             C P FFC  T  +H  P  K EHG
Sbjct  129   CKPNFFCNSTVCEHCDPCTKCEHG  152


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -2

Query  4791  MLLLPI*HPLV  4759
             +LLLPI  PL+
Sbjct  179   LLLLPI--PLI  187


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6917  FYCNST  6934
             F+CNST
Sbjct  133   FFCNST  138


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -3

Query  6032  LPILLLVGWGLWVHR  5988
             LPI L V    WV R
Sbjct  182   LPIPLIV----WVKR  192


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PLVL S
Sbjct  7     LL---PLVLTS  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7544  LLGIW  7558
             +LGIW
Sbjct  1     MLGIW  5


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2810  WTVQPIVL  2833
             WT  P VL
Sbjct  5     WTLLPLVL  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3563  GLEVNI  3580
             GLEV I
Sbjct  112   GLEVEI  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1479  NFRNQ  1493
             NFRN+
Sbjct  326   NFRNE  330


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5158  PFIVW  5144
             P IVW
Sbjct  185   PLIVW  189


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  7133  TRDGGNSN--NE  7162
             T D  NSN  NE
Sbjct  319   TSDSENSNFRNE  330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2058  LPIMLTGV  2035
             LP  LT V
Sbjct  8     LPLVLTSV  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7489  DAPDC  7475
             D PDC
Sbjct  78    DEPDC  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5572  DESDC  5558
             DE DC
Sbjct  78    DEPDC  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3506  DTTNQKTEL  3532
             DT  QK +L
Sbjct  269   DTAEQKVQL  277


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  5435  LLVPIA-IV  5458
             LL PI  IV
Sbjct  180   LLLPIPLIV  188


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2334  LIRELK  2351
             LI +LK
Sbjct  294   LIKDLK  299


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2253  KIHTI  2267
             KI+TI
Sbjct  309   KIQTI  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2266  IVWI  2255
             IVW+
Sbjct  187   IVWV  190


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2753  KHQKE  2767
             KH KE
Sbjct  201   KHRKE  205


>ref|NP_148936.2|  fas-activated serine/threonine kinase isoform 4 [Homo sapiens]
Length=408

 GENE ID: 10922 FASTK | Fas-activated serine/threonine kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 0/11 (0%)
 Frame = +1

Query  5116  PRRPRATEGAT  5148
             PR PR TEGAT
Sbjct  10    PRAPRPTEGAT  20


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = +2

Query  1865  LLDTGADDTVLEEMSLPG  1918
             LLDT  +   LE   LPG
Sbjct  219   LLDTAVE---LE---LPG  230


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 15/37 (40%)
 Frame = -1

Query  9019  RPRLPGKSPAESPL*QA--R----------CQQFLKY  8945
             R RLP K P   PL Q   R          C  FL Y
Sbjct  44    RLRLPPKPP--PPL-QPLLRGGQGLEAALSCPRFLRY  77


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3041  HVLVLL  3024
             HV+VLL
Sbjct  97    HVMVLL  102


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1525  LPQLK  1511
             LPQLK
Sbjct  385   LPQLK  389


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  7938  PRGDPTGP  7961
             PRG+P GP
Sbjct  4     PRGEP-GP  10


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = -3

Query  8981  LVASSMSAVLEVLRMQ  8934
             L ASS  AVL V R Q
Sbjct  293   LCASSSGAVLPV-RTQ  307


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +2

Query  7379  LTVQARQLLSGIVQ  7420
             L VQ  QL S +VQ
Sbjct  124   LVVQETQLSSKVVQ  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8723  VVLLIRE  8703
             VVL  RE
Sbjct  336   VVLVLRE  342


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1130  PSFINF  1113
             P FIN+
Sbjct  198   PGFINY  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2267  YCMDF  2253
             YC DF
Sbjct  287   YCTDF  291


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 22/37 (59%)
 Frame = -3

Query  1760  LLRG--------SCC--L-YPR-----------PEAL  1716
             LLRG        SC   L YPR           PE L
Sbjct  58    LLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEEL  94


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6420  IVPRLVLRF  6446
             +V  LVL F
Sbjct  135   VVQKLVLPF  143


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1612  VLRDR  1626
             VLR+R
Sbjct  339   VLRER  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4354  PPNPP  4340
             PP PP
Sbjct  48    PPKPP  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218  PEEL  229
            PEEL
Sbjct  91   PEEL  94


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6632  LNTSVE  6649
             L+T VE
Sbjct  220   LDTAVE  225


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  133  TRDP  144
            TRDP
Sbjct  329  TRDP  332


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6258  VLILKE  6241
             VL+L E
Sbjct  337   VLVLRE  342


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2816  VQPIVLP  2836
             VQ  VLP
Sbjct  136   VQKLVLP  142


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  1350  PAATLEEMMTACQ  1388
             P AT   +M  CQ
Sbjct  171   PLATVNILMSLCQ  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3062  KDLIAE  3079
             KD +AE
Sbjct  261   KDIVAE  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5502  LRHLL  5516
             LR+LL
Sbjct  268   LRQLL  272


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  305  FLAYSP  288
            FL Y P
Sbjct  310  FLPYPP  315


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9049  LRARH  9035
             LR RH
Sbjct  359   LRERH  363


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1541  QKLQ  1552
             QKLQ
Sbjct  394   QKLQ  397


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  587  PLLCA  601
            PL CA
Sbjct  34   PLVCA  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5013  GSLQYLAL  5036
             G L YL L
Sbjct  144   GRLNYLPL  151


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2949  PLRSLH  2932
             P R LH
Sbjct  188   PFRALH  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  507  RQILGQ  524
            RQ LG+
Sbjct  269  RQLLGE  274


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6403  LKGYL  6389
             LK YL
Sbjct  388   LKSYL  392


>ref|NP_006703.1|  fas-activated serine/threonine kinase isoform 1 [Homo sapiens]
Length=549

 GENE ID: 10922 FASTK | Fas-activated serine/threonine kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 27.4 bits (57),  Expect =    21
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 0/11 (0%)
 Frame = +1

Query  5116  PRRPRATEGAT  5148
             PR PR TEGAT
Sbjct  10    PRAPRPTEGAT  20


 Score = 19.3 bits (38),  Expect(2) =  1439
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8078  RLRDLLLI  8101
             RL  LLLI
Sbjct  48    RLSGLLLI  55


 Score = 18.5 bits (36),  Expect(2) =  1439
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  7938  PRGDPTGP  7961
             PRG+P GP
Sbjct  4     PRGEP-GP  10


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4626  LLATQSSPA  4600
             LL  Q SPA
Sbjct  39    LLSAQTSPA  47


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = +2

Query  1865  LLDTGADDTVLEEMSLPG  1918
             LLDT  +   LE   LPG
Sbjct  360   LLDTAVE---LE---LPG  371


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 15/37 (40%)
 Frame = -1

Query  9019  RPRLPGKSPAESPL*QA--R----------CQQFLKY  8945
             R RLP K P   PL Q   R          C  FL Y
Sbjct  185   RLRLPPKPP--PPL-QPLLRGGQGLEAALSCPRFLRY  218


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3041  HVLVLL  3024
             HV+VLL
Sbjct  238   HVMVLL  243


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  7220  IIHFSNCPSY  7191
             II   NCPS+
Sbjct  146   IIR--NCPSF  153


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1525  LPQLK  1511
             LPQLK
Sbjct  526   LPQLK  530


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8315  QGLERIL  8335
             QGL+R L
Sbjct  83    QGLQRLL  89


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = -3

Query  8981  LVASSMSAVLEVLRMQ  8934
             L ASS  AVL V R Q
Sbjct  434   LCASSSGAVLPV-RTQ  448


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +2

Query  7379  LTVQARQLLSGIVQ  7420
             L VQ  QL S +VQ
Sbjct  265   LVVQETQLSSKVVQ  278


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8723  VVLLIRE  8703
             VVL  RE
Sbjct  477   VVLVLRE  483


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1130  PSFINF  1113
             P FIN+
Sbjct  339   PGFINY  344


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2267  YCMDF  2253
             YC DF
Sbjct  428   YCTDF  432


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8074  PPLERLTL  8097
             PP E  TL
Sbjct  132   PPVEQVTL  139


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 22/37 (59%)
 Frame = -3

Query  1760  LLRG--------SCC--L-YPR-----------PEAL  1716
             LLRG        SC   L YPR           PE L
Sbjct  199   LLRGGQGLEAALSCPRFLRYPRQHLISSLAEARPEEL  235


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6420  IVPRLVLRF  6446
             +V  LVL F
Sbjct  276   VVQKLVLPF  284


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1612  VLRDR  1626
             VLR+R
Sbjct  480   VLRER  484


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4354  PPNPP  4340
             PP PP
Sbjct  189   PPKPP  193


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218  PEEL  229
            PEEL
Sbjct  232  PEEL  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6632  LNTSVE  6649
             L+T VE
Sbjct  361   LDTAVE  366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  133  TRDP  144
            TRDP
Sbjct  470  TRDP  473


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6258  VLILKE  6241
             VL+L E
Sbjct  478   VLVLRE  483


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  366  GELDRW  383
            GEL RW
Sbjct  96   GELLRW  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6035  HLPILL  6018
             HL +LL
Sbjct  163   HLAVLL  168


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2816  VQPIVLP  2836
             VQ  VLP
Sbjct  277   VQKLVLP  283


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  1350  PAATLEEMMTACQ  1388
             P AT   +M  CQ
Sbjct  312   PLATVNILMSLCQ  324


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3062  KDLIAE  3079
             KD +AE
Sbjct  402   KDIVAE  407


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5502  LRHLL  5516
             LR+LL
Sbjct  409   LRQLL  413


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  305  FLAYSP  288
            FL Y P
Sbjct  451  FLPYPP  456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9049  LRARH  9035
             LR RH
Sbjct  500   LRERH  504


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1541  QKLQ  1552
             QKLQ
Sbjct  535   QKLQ  538


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3044  LHVLVLL  3024
             LH  VLL
Sbjct  162   LHLAVLL  168


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  587  PLLCA  601
            PL CA
Sbjct  175  PLVCA  179


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5013  GSLQYLAL  5036
             G L YL L
Sbjct  285   GRLNYLPL  292


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2949  PLRSLH  2932
             P R LH
Sbjct  329   PFRALH  334


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  507  RQILGQ  524
            RQ LG+
Sbjct  410  RQLLGE  415


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6403  LKGYL  6389
             LK YL
Sbjct  529   LKSYL  533


>gb|ABR91958.1|  T-cell receptor beta chain [Homo sapiens]
Length=61


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query  798  WVKVVEE--KAFSPEV  839
            W  VVE+  K F PEV
Sbjct  40   WLTVVEDLNKVFPPEV  55


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  43    VVEDLNK  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3216  FCTASV  3199
             FC  SV
Sbjct  19    FCASSV  24


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6827  FGNNKTIIF  6853
             FG   TI F
Sbjct  27    FGSGNTIYF  35


>gb|ABR37257.1|  T-cell receptor beta chain [Homo sapiens]
Length=74


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query  798  WVKVVEE--KAFSPEV  839
            W  VVE+  K F PEV
Sbjct  53   WLTVVEDLNKVFPPEV  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  56    VVEDLNK  62


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8881  TSLSGSSI  8858
             T LSG  I
Sbjct  39    TGLSGNTI  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  137  EIPQTL  154
            E+PQ L
Sbjct  2    EVPQNL  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  1471  REAILGTKERLLS  1509
             R+ IL  K  LLS
Sbjct  15    RQFILSSKKLLLS  27


>gb|ABR37249.1|  T cell receptor [Homo sapiens]
Length=79


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query  798  WVKVVEE--KAFSPEV  839
            W  VVE+  K F PEV
Sbjct  57   WLTVVEDLNKVFPPEV  72


 Score = 19.3 bits (38),  Expect(2) =  3671
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4124  NGSNFT  4141
             +GSNFT
Sbjct  19    DGSNFT  24


 Score = 17.6 bits (34),  Expect(2) =  3671
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  60    VVEDLNK  66


>gb|ABR37248.1|  T cell receptor [Homo sapiens]
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query  798  WVKVVEE--KAFSPEV  839
            W  VVE+  K F PEV
Sbjct  96   WLTVVEDLNKVFPPEV  111


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6235  KLLFQY  6252
             KLLF+Y
Sbjct  32    KLLFHY  37


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -3

Query  4832  TQ--MPVSFSCMQT  4797
             TQ   PV  SC QT
Sbjct  1     TQFGKPVTLSCSQT  14


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5968  MYLC  5957
             MYLC
Sbjct  76    MYLC  79


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2619  FCFL  2608
             FCFL
Sbjct  61    FCFL  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4880  YLCAI  4866
             YLCA+
Sbjct  77    YLCAV  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  99    VVEDLNK  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6795  KVLFHF  6778
             K LFH+
Sbjct  32    KLLFHY  37


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6848  LLFYYF  6831
             LLF Y+
Sbjct  33    LLFHYY  38


>pdb|2IAL|B  Chain B, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
 pdb|2IAL|D  Chain D, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
 pdb|2IAM|D  Chain D, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
 pdb|2IAN|E  Chain E, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
 pdb|2IAN|J  Chain J, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
 pdb|2IAN|O  Chain O, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
 pdb|2IAN|T  Chain T, Structural Basis For Recognition Of Mutant Self By A 
Tumor- Specific, Mhc Class Ii-Restricted Tcr
Length=240


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query  798  WVKVVEE--KAFSPEV  839
            W  VVE+  K F PEV
Sbjct  106  WLTVVEDLNKVFPPEV  121


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  213   LSENDEWT  220


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS YAL
Sbjct  181   DSRYAL  186


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  109   VVEDLNK  115


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  127   SEAEIS  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8685  YHTQGYF  8705
             YH  GYF
Sbjct  95    YHGTGYF  101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3251  TPKF  3262
             TPKF
Sbjct  7     TPKF  10


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6500  TVQCTH  6517
             T QCT+
Sbjct  20    TLQCTQ  25


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4883  VYLCA  4869
             VY CA
Sbjct  88    VYFCA  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4646  CSNPHP  4629
             C +P+P
Sbjct  167   CTDPQP  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5952  YALAS  5938
             YAL S
Sbjct  184   YALSS  188


>pdb|2GSX|A  Chain A, Complement Receptor Type 2
Length=951


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  292  HQ-SPPLASCRAR  257
            HQ  PPLA CR R
Sbjct  939  HQWNPPLAVCRSR  951


 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/37 (32%), Positives = 13/37 (35%), Gaps = 18/37 (48%)
 Frame = +2

Query  3968  CTHLEGKVILVAVHVASGY-IEAEVIPAETGQETAYF  4075
             C H         VH+A GY I         G E  YF
Sbjct  582   CSH---------VHIANGYKI--------SGKEAPYF  601


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1492  WFLKLPLC  1469
             WF K PLC
Sbjct  687   WFKKIPLC  694


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3019  DSKRTSTWS  3045
             DS  T TWS
Sbjct  308   DSQKTGTWS  316


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  5981  THACVPTDPNPQEVVLVNVTENF  6049
             T  C   DP+P+E V      NF
Sbjct  282   TYTC---DPDPEEGV------NF  295


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7097  IRCSSN  7114
             IRC SN
Sbjct  554   IRCTSN  559


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2762  KEPPFLWMG  2788
             KEPP L  G
Sbjct  207   KEPPILRVG  215


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3935  VDCSPG  3952
             VDC PG
Sbjct  794   VDCNPG  799


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -2

Query  1140  PGLSIFYK----FLLLG  1102
             PG+SI Y     +LL G
Sbjct  852   PGMSILYSCDQGYLLVG  868


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8676  DQGYL  8662
             DQGYL
Sbjct  861   DQGYL  865


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 15/35 (42%)
 Frame = +2

Query  6446  LKC---NNKTFNGT--GP---C---TNVSTVQCTH  6517
             L C     KT  GT  GP   C   T  S VQC H
Sbjct  303   LRCTVDSQKT--GTWSGPAPRCELST--SAVQCPH  333


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7088  SGQIRC  7105
             S QIRC
Sbjct  619   SSQIRC  624


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -2

Query  7842  PPTIIMN---------NFIY  7810
             PP +I N         NF Y
Sbjct  701   PPPVIVNGKHTGMMAENFLY  720


 Score = 17.6 bits (34),  Expect(2) =  9507
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6503  VQCTH  6517
             VQC H
Sbjct  580   VQCSH  584


 Score = 15.9 bits (30),  Expect(2) =  9507
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  552   STIRCT  557


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6831  PNCSLNLLAI  6802
             P C L LLA+
Sbjct  571   PLCKLSLLAV  580


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4807  QEKETGIW  4830
             Q+ E GIW
Sbjct  680   QDAENGIW  687


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +2

Query  590  LLCASKDR-----DK  619
            LLC  KD      DK
Sbjct  43   LLCITKDKVDGTWDK  57


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2850  GLSMTY  2867
             GLS TY
Sbjct  156   GLSVTY  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1534  CPSLP  1520
             CP LP
Sbjct  134   CPALP  138


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  31   GSSLAN  48
            G SLAN
Sbjct  269  GNSLAN  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9116  GSSLAN  9133
             G SLAN
Sbjct  269   GNSLAN  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  5843  TSQGAWCPISTP  5808
             TS+G W    TP
Sbjct  434   TSEGVW----TP  441


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7661  WDREI  7675
             WD EI
Sbjct  630   WDPEI  634


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6745  ISYFS  6731
             ISY+S
Sbjct  14    ISYYS  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  996   GPIAPG  1013
             G IAPG
Sbjct  151   GSIAPG  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -3

Query  8714  LIREVAL-CVVDPQ  8676
             LI E  L C VD Q
Sbjct  297   LIGESTLRCTVDSQ  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  970  GIECIQC  990
            G E IQC
Sbjct  427  GEESIQC  433


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2054  GRNLLT  2071
             GR LLT
Sbjct  455   GRQLLT  460


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -3

Query  233  ER------APLVSLSL  204
            ER      APL  LSL
Sbjct  562  ERGTWSGPAPLCKLSL  577


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5156  IHCVAPSV  5133
             IHC  P V
Sbjct  697   IHCHPPPV  704


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4128  PLSVC  4114
             PL VC
Sbjct  944   PLAVC  948


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1543  LAVCPS  1526
             LAVC S
Sbjct  945   LAVCRS  950


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7029  ILHGRV  7012
             IL GR+
Sbjct  9     ILNGRI  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4725  PHPRI  4739
             PHP I
Sbjct  332   PHPQI  336


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2527  SVQCAS  2544
             S+QC S
Sbjct  430   SIQCTS  435


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3726  PPIPLC  3709
             PP+P C
Sbjct  441   PPVPQC  446


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  11   VRPD  22
            VRPD
Sbjct  467  VRPD  470


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  9096  VRPD  9107
             VRPD
Sbjct  467   VRPD  470


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1492  WFLKLPLC  1469
             WF+   LC
Sbjct  495   WFMEIRLC  502


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5923  SILCI  5937
             S LCI
Sbjct  42    SLLCI  46


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4832  TQMPV  4818
             T MPV
Sbjct  246   TKMPV  250


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7394  RQLL  7405
             RQLL
Sbjct  456   RQLL  459


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5793  STCGDG  5810
             S CG+G
Sbjct  473   SSCGEG  478


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8936  QLSGH  8922
             QL GH
Sbjct  670   QLTGH  674


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4479  QSGFLL  4462
             +SG+LL
Sbjct  164   ESGYLL  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4140  PVLRLG  4157
             P+LR G
Sbjct  210   PILRVG  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  7029  ILHGRVIVS  7003
             IL GR  VS
Sbjct  336   ILRGR-MVS  343


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3314  QATWIP  3331
             Q TW P
Sbjct  376   QGTWEP  381


>ref|NP_733840.1|  NLR family member X1 isoform 2 [Homo sapiens]
Length=921

 GENE ID: 79671 NLRX1 | NLR family member X1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  4066  CFLPCFCW  4043
             CFLP +CW
Sbjct  368   CFLPSYCW  375


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4544  IKVVPR  4561
             IKVVPR
Sbjct  556   IKVVPR  561


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8081  LRDLLL  8098
             LRDLLL
Sbjct  770   LRDLLL  775


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 9/22 (40%)
 Frame = +2

Query  5306  LFIH--FQNWVST*QNRRYSTE  5365
             LF H  FQN     Q  R+S E
Sbjct  679   LFFHYEFQN-----Q--RFSAE  693


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  4713  HYESPHPRISSEV  4751
             HYE    R S EV
Sbjct  682   HYEFQNQRFSAEV  694


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1048  ELLVPF  1065
             ELL+PF
Sbjct  192   ELLIPF  197


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2356  EVLSSL  2339
             EVLSSL
Sbjct  693   EVLSSL  698


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2244  IFEIFPSF  2221
             +FE FP F
Sbjct  619   VFELFPMF  626


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6385  TGLCND  6368
             TGLC D
Sbjct  256   TGLCSD  261


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = -3

Query  1514  ETLN-----NLSL  1491
             ETL+     NLSL
Sbjct  409   ETLDSTDPSNLSL  421


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3296  MFPMF  3282
             +FPMF
Sbjct  622   LFPMF  626


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7626  RDLLLQ  7609
             RDLLL+
Sbjct  771   RDLLLH  776


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2397  FNPAGCG  2377
             FNP  CG
Sbjct  150   FNPDACG  156


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +3

Query  1335  LKALGPA-ATLEEMMTACQ  1388
             L  LGPA A L      CQ
Sbjct  202   LSSLGPAPASL------CQ  214


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  471  LRIVLAPC  448
            LR  LAPC
Sbjct  474  LRFFLAPC  481


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4137  KLLPL  4123
             KLLPL
Sbjct  542   KLLPL  546


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3203  LLIVLH  3186
             LL VLH
Sbjct  237   LLFVLH  242


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2955  LVPLRSL  2935
             L PLR L
Sbjct  543   LLPLRAL  549


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3212  ALPLL  3198
             ALPLL
Sbjct  548   ALPLL  552


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7820  LFIMIVGGL  7846
             LF M  GGL
Sbjct  622   LFPMFMGGL  630


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5789  YQHLW  5803
             Y HLW
Sbjct  884   YAHLW  888


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  1381  HVRE*EDPAIRQ  1416
             HV    DP IR+
Sbjct  110   HV----DPVIRE  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +2

Query  2057  RNLLTQIGCTLNFPI  2101
             R  L Q GC    PI
Sbjct  636   RAVLAQLGC----PI  646


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4610  HHLP  4599
             HHLP
Sbjct  5     HHLP  8


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = -2

Query  7443  ALSKLFCCCTIPDNNCLAC  7387
             ALS LF     PD    AC
Sbjct  145   ALSQLF----NPD----AC  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  567  LYNTVAT  587
            LY TV T
Sbjct  164  LYGTVGT  170


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2960  LTEVIPL  2980
             L EV PL
Sbjct  223   LKEVLPL  229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6273  LPLM  6262
             LPLM
Sbjct  227   LPLM  230


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8080  LERLTLD  8100
             LE L LD
Sbjct  244   LEHLNLD  250


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  8133  LR----PRSSTILVT  8101
             LR    P  S ILVT
Sbjct  276   LRKYMLPQAS-ILVT  289


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2062  ISSNYVDR  2039
             I S YV R
Sbjct  298   IPSKYVGR  305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -2

Query  6507  CTVLTFVHGPVP  6472
             C  L F H P P
Sbjct  378   CATLHFLHAPTP  389


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1060  VLVVPAM  1040
             V  VPAM
Sbjct  491   VFTVPAM  497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7493  QLQARILAVE  7522
             Q+ A IL VE
Sbjct  596   QMGASILGVE  605


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3564  PESCK  3550
             PE CK
Sbjct  764   PEACK  768


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6935  QLFN  6946
             QLFN
Sbjct  148   QLFN  151


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5934  AQNRVVVA  5911
             A+NR V A
Sbjct  633   AHNRAVLA  640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7333  VLGSSR  7350
             VLGS R
Sbjct  719   VLGSGR  724


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 7/25 (28%)
 Frame = -2

Query  8931  LGP------RDEML-GGCQTSTLTL  8878
             LGP      RD +L   CQ  TL L
Sbjct  762   LGPEACKDLRDLLLHDQCQITTLRL  786


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1264  EACSALR  1244
             EAC  LR
Sbjct  765   EACKDLR  771


 Score = 15.1 bits (28),  Expect(2) = 39210
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2363  LPRSLE  2346
             L R LE
Sbjct  354   LSRNLE  359


 Score = 15.1 bits (28),  Expect(2) = 39210
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2319  TNFLHL  2302
             T FL L
Sbjct  399   TSFLRL  404


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1790  RIQFLV  1773
             RI FL+
Sbjct  26    RIPFLI  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8021  RSLIEW  8004
             R L EW
Sbjct  84    RNLAEW  89


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  7537  STAPGDLGLL  7566
             ST P +L L+
Sbjct  413   STDPSNLSLM  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  740  HYRVILADL  714
            H R +LA L
Sbjct  634  HNRAVLAQL  642


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1335  LKALGPAA  1358
             L  LGP A
Sbjct  759   LNSLGPEA  766


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +2

Query  5138  RE-PHNEWTLELLE  5176
             RE P     LELL+
Sbjct  860   REHP----SLELLQ  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6089  PHASVL  6072
             P+AS+L
Sbjct  282   PQASIL  287


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = -1

Query  6229  LSFLHYHSPA----TTI  6191
             L FLH   PA    T I
Sbjct  381   LHFLHAPTPAGQTLTSI  397


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  8310  ILLGMWRIALQ  8278
             I LG+    LQ
Sbjct  506   IVLGLRKTTLQ  516


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2836  RKRQL  2850
             R RQL
Sbjct  833   RNRQL  837


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3922  HAWTSRL  3942
             H WT R+
Sbjct  886   HLWTPRM  892


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8027  RIRSLIEW  8004
             RI  LI W
Sbjct  26    RIPFLIHW  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3601  IRNHSS  3618
             IR H S
Sbjct  50    IRHHGS  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1492  WFLKLP  1475
             WF  LP
Sbjct  89    WFSRLP  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6081  ICSTMSFFH  6055
             +C T+ F H
Sbjct  377   VCATLHFLH  385


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3038  VLVLLESL  3015
             V VL+E L
Sbjct  796   VAVLMEGL  803


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3310  LASHLD  3327
             LA +LD
Sbjct  827   LAAQLD  832


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7501  LELL  7490
             LELL
Sbjct  865   LELL  868


>ref|NP_149052.1|  microtubule-associated protein 6 isoform 1 [Homo sapiens]
Length=813

 GENE ID: 4135 MAP6 | microtubule-associated protein 6 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 12/33 (36%)
 Frame = -1

Query  9094  RETQYRQKAAAYMQDLRARHSPVPPR---PRLP  9005
             RETQY QK      D RA   P P R   P  P
Sbjct  152   RETQY-QK------DFRAW--PLPRRGDHPWIP  175


 Score = 25.2 bits (52),  Expect =    93
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  5833  EH-GAPSPPPSPQ  5798
             EH GAP  PP PQ
Sbjct  38    EHPGAPPQPPPPQ  50


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 9/24 (37%)
 Frame = +1

Query  2170  IDRRKNKSISRNLYRDGKGRENFK  2241
             IDRR    I R LY      E FK
Sbjct  355   IDRRR---I-RSLY-----SEPFK  369


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  734  YS--AEHPGA  757
            YS   EHPGA
Sbjct  33   YSEATEHPGA  42


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 13/29 (44%)
 Frame = +2

Query  5117  PE---DQGPQREPHNEWTLELLEELKNEA  5194
             PE   DQGP R P         E  KN+A
Sbjct  556   PESLKDQGP-RIP---------EPVKNQA  574


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4977  PRCEYQ  4994
             PR EYQ
Sbjct  139   PRSEYQ  144


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  4623  VDRMRIRTWKSL  4658
             +DR RIR   SL
Sbjct  355   IDRRRIR---SL  363


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -3

Query  8048  DRPR*VPRIRSL  8013
             DR R   RIRSL
Sbjct  356   DR-R---RIRSL  363


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3119  YQEPFK  3136
             Y EPFK
Sbjct  364   YSEPFK  369


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4094  RWPV  4105
             RWPV
Sbjct  203   RWPV  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3611  IQAQPDQSE  3637
             I+ QP Q E
Sbjct  67    IETQPAQGE  75


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 11/36 (30%)
 Frame = +2

Query  2102  SPIETVPVKLKPGMD-GPKV-----KQWPLTEEKIK  2191
             SP+   PVK     D GP V      Q P+   K+K
Sbjct  519   SPVISAPVK-----DQGPSVPVPPKNQSPMVPAKVK  549


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -2

Query  4176  PAHQQA--ALTVAP  4141
             P +QQA  AL  AP
Sbjct  48    PPQQQAQPAL--AP  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  356  IKRGRIRSM  382
            I R RIRS+
Sbjct  355  IDRRRIRSL  363


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6970  PSTIKP  6953
             PST KP
Sbjct  416   PSTTKP  421


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = +1

Query  8152  ILV--ESPTVLE  8181
             +LV  + PTVL+
Sbjct  722   VLVKDQGPTVLQ  733


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3371  WYQLEK  3388
             W QL+K
Sbjct  16    WNQLDK  21


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  208  ERETR  222
            ER+TR
Sbjct  235  ERDTR  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2731  PPQQ  2720
             PPQQ
Sbjct  48    PPQQ  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3905  QLKGEA  3922
             Q KGEA
Sbjct  339   QFKGEA  344


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  4164  QAALTVAPVK  4135
             QA +  APVK
Sbjct  573   QAPMVPAPVK  582


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  274  ASCRARF  254
            A C ARF
Sbjct  9    ACCIARF  15


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = -1

Query  310  QNF--WRTHQSP-PLASCRAR  257
            Q++  W   Q P P  SCR R
Sbjct  123  QDYRAWKV-QRPEP--SCRPR  140


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  561  RSLY  572
            RSLY
Sbjct  361  RSLY  364


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5838  PRSMVP  5821
             PR M+P
Sbjct  796   PRVMIP  801


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  907  WGDIK  921
            W DIK
Sbjct  308  WTDIK  312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 1/11 (9%)
 Frame = +1

Query  4201  LQSPKSRSSRI  4233
             LQ PK    RI
Sbjct  732   LQPPKNQ-GRI  741


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4354  PPNPP  4340
             PP PP
Sbjct  43    PPQPP  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1749  PPQKQ  1763
             PPQ Q
Sbjct  48    PPQQQ  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2211  VQIS  2200
             VQIS
Sbjct  178   VQIS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1526  RRAHSQ  1543
             RR +SQ
Sbjct  196   RRPQSQ  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8517  EAQEEE  8534
             EA E+E
Sbjct  211   EAREQE  216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  7588  SGANEFSRAT  7559
             SGA+E  R T
Sbjct  231   SGADE--RDT  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7720  KPARK  7734
             KP RK
Sbjct  392   KPTRK  396


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 2/14 (14%)
 Frame = +2

Query  2576  QSSMTKILEPFRKQ  2617
             Q  M  + EP  KQ
Sbjct  474   QGPM--VQEPLKKQ  485


>ref|NP_997460.1|  microtubule-associated protein 6 isoform 2 [Homo sapiens]
Length=439

 GENE ID: 4135 MAP6 | microtubule-associated protein 6 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 12/33 (36%)
 Frame = -1

Query  9094  RETQYRQKAAAYMQDLRARHSPVPPR---PRLP  9005
             RETQY QK      D RA   P P R   P  P
Sbjct  152   RETQY-QK------DFRAW--PLPRRGDHPWIP  175


 Score = 25.2 bits (52),  Expect =    93
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  5833  EH-GAPSPPPSPQ  5798
             EH GAP  PP PQ
Sbjct  38    EHPGAPPQPPPPQ  50


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 9/24 (37%)
 Frame = +1

Query  2170  IDRRKNKSISRNLYRDGKGRENFK  2241
             IDRR    I R LY      E FK
Sbjct  355   IDRRR---I-RSLY-----SEPFK  369


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  734  YS--AEHPGA  757
            YS   EHPGA
Sbjct  33   YSEATEHPGA  42


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4977  PRCEYQ  4994
             PR EYQ
Sbjct  139   PRSEYQ  144


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  4623  VDRMRIRTWKSL  4658
             +DR RIR   SL
Sbjct  355   IDRRRIR---SL  363


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -3

Query  8048  DRPR*VPRIRSL  8013
             DR R   RIRSL
Sbjct  356   DR-R---RIRSL  363


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3119  YQEPFK  3136
             Y EPFK
Sbjct  364   YSEPFK  369


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4094  RWPV  4105
             RWPV
Sbjct  203   RWPV  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3611  IQAQPDQSE  3637
             I+ QP Q E
Sbjct  67    IETQPAQGE  75


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -2

Query  4176  PAHQQA--ALTVAP  4141
             P +QQA  AL  AP
Sbjct  48    PPQQQAQPAL--AP  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  356  IKRGRIRSM  382
            I R RIRS+
Sbjct  355  IDRRRIRSL  363


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6970  PSTIKP  6953
             PST KP
Sbjct  416   PSTTKP  421


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3371  WYQLEK  3388
             W QL+K
Sbjct  16    WNQLDK  21


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  208  ERETR  222
            ER+TR
Sbjct  235  ERDTR  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2731  PPQQ  2720
             PPQQ
Sbjct  48    PPQQ  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3905  QLKGEA  3922
             Q KGEA
Sbjct  339   QFKGEA  344


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  274  ASCRARF  254
            A C ARF
Sbjct  9    ACCIARF  15


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = -1

Query  310  QNF--WRTHQSP-PLASCRAR  257
            Q++  W   Q P P  SCR R
Sbjct  123  QDYRAWKV-QRPEP--SCRPR  140


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  561  RSLY  572
            RSLY
Sbjct  361  RSLY  364


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  907  WGDIK  921
            W DIK
Sbjct  308  WTDIK  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4354  PPNPP  4340
             PP PP
Sbjct  43    PPQPP  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1749  PPQKQ  1763
             PPQ Q
Sbjct  48    PPQQQ  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2211  VQIS  2200
             VQIS
Sbjct  178   VQIS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1526  RRAHSQ  1543
             RR +SQ
Sbjct  196   RRPQSQ  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8517  EAQEEE  8534
             EA E+E
Sbjct  211   EAREQE  216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  7588  SGANEFSRAT  7559
             SGA+E  R T
Sbjct  231   SGADE--RDT  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7720  KPARK  7734
             KP RK
Sbjct  392   KPTRK  396


>ref|NP_001868.2|  complement receptor type 2 isoform 2 precursor [Homo sapiens]
Length=1033

 GENE ID: 1380 CR2 | complement component (3d/Epstein Barr virus) receptor 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  292  HQ-SPPLASCRAR  257
            HQ  PPLA CR R
Sbjct  959  HQWNPPLAVCRSR  971


 Score = 25.7 bits (53),  Expect =    70
 Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 12/34 (35%)
 Frame = -1

Query  8452  RSRDAAPTLS--AAGSARLILSLT---VGHPITL  8366
             RSR  AP L   AAG   LIL LT   V   ITL
Sbjct  969   RSRSLAPVLCGIAAG---LIL-LTFLIV---ITL  995


 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/37 (32%), Positives = 13/37 (35%), Gaps = 18/37 (48%)
 Frame = +2

Query  3968  CTHLEGKVILVAVHVASGY-IEAEVIPAETGQETAYF  4075
             C H         VH+A GY I         G E  YF
Sbjct  602   CSH---------VHIANGYKI--------SGKEAPYF  621


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1492  WFLKLPLC  1469
             WF K PLC
Sbjct  707   WFKKIPLC  714


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 26/54 (48%)
 Frame = -1

Query  5389  LLAPFLALLCRVTPILL---C--RHPILKMDKQQLLQN---SYYGFHSCPSIPI  5252
             LL  FLAL   V P  L   C    PIL         N   SYY      S PI
Sbjct  6     LLGVFLAL---VAPGVLGISCGSPPPIL---------NGRISYY------STPI  41


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3019  DSKRTSTWS  3045
             DS  T TWS
Sbjct  328   DSQKTGTWS  336


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  5981  THACVPTDPNPQEVVLVNVTENF  6049
             T  C   DP+P+E V      NF
Sbjct  302   TYTC---DPDPEEGV------NF  315


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7097  IRCSSN  7114
             IRC SN
Sbjct  574   IRCTSN  579


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2762  KEPPFLWMG  2788
             KEPP L  G
Sbjct  227   KEPPILRVG  235


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3935  VDCSPG  3952
             VDC PG
Sbjct  814   VDCNPG  819


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -2

Query  1140  PGLSIFYK----FLLLG  1102
             PG+SI Y     +LL G
Sbjct  872   PGMSILYSCDQGYLLVG  888


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8676  DQGYL  8662
             DQGYL
Sbjct  881   DQGYL  885


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 15/35 (42%)
 Frame = +2

Query  6446  LKC---NNKTFNGT--GP---C---TNVSTVQCTH  6517
             L C     KT  GT  GP   C   T  S VQC H
Sbjct  323   LRCTVDSQKT--GTWSGPAPRCELST--SAVQCPH  353


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7088  SGQIRC  7105
             S QIRC
Sbjct  639   SSQIRC  644


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -2

Query  7842  PPTIIMN---------NFIY  7810
             PP +I N         NF Y
Sbjct  721   PPPVIVNGKHTGMMAENFLY  740


 Score = 17.6 bits (34),  Expect(2) =  9220
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6503  VQCTH  6517
             VQC H
Sbjct  600   VQCSH  604


 Score = 15.9 bits (30),  Expect(2) =  9220
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  572   STIRCT  577


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6831  PNCSLNLLAI  6802
             P C L LLA+
Sbjct  591   PLCKLSLLAV  600


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4807  QEKETGIW  4830
             Q+ E GIW
Sbjct  700   QDAENGIW  707


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +2

Query  590  LLCASKDR-----DK  619
            LLC  KD      DK
Sbjct  63   LLCITKDKVDGTWDK  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2850  GLSMTY  2867
             GLS TY
Sbjct  176   GLSVTY  181


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8910  AFHHVARE  8933
             AFH  ARE
Sbjct  1015  AFHLEARE  1022


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1534  CPSLP  1520
             CP LP
Sbjct  154   CPALP  158


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  31   GSSLAN  48
            G SLAN
Sbjct  289  GNSLAN  294


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9116  GSSLAN  9133
             G SLAN
Sbjct  289   GNSLAN  294


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  5843  TSQGAWCPISTP  5808
             TS+G W    TP
Sbjct  454   TSEGVW----TP  461


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7661  WDREI  7675
             WD EI
Sbjct  650   WDPEI  654


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6745  ISYFS  6731
             ISY+S
Sbjct  34    ISYYS  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  996   GPIAPG  1013
             G IAPG
Sbjct  171   GSIAPG  176


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -3

Query  8714  LIREVAL-CVVDPQ  8676
             LI E  L C VD Q
Sbjct  317   LIGESTLRCTVDSQ  330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  970  GIECIQC  990
            G E IQC
Sbjct  447  GEESIQC  453


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2054  GRNLLT  2071
             GR LLT
Sbjct  475   GRQLLT  480


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -3

Query  233  ER------APLVSLSL  204
            ER      APL  LSL
Sbjct  582  ERGTWSGPAPLCKLSL  597


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5156  IHCVAPSV  5133
             IHC  P V
Sbjct  717   IHCHPPPV  724


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4128  PLSVC  4114
             PL VC
Sbjct  964   PLAVC  968


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1543  LAVCPS  1526
             LAVC S
Sbjct  965   LAVCRS  970


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7029  ILHGRV  7012
             IL GR+
Sbjct  29    ILNGRI  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4725  PHPRI  4739
             PHP I
Sbjct  352   PHPQI  356


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2527  SVQCAS  2544
             S+QC S
Sbjct  450   SIQCTS  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3726  PPIPLC  3709
             PP+P C
Sbjct  461   PPVPQC  466


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  11   VRPD  22
            VRPD
Sbjct  487  VRPD  490


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  9096  VRPD  9107
             VRPD
Sbjct  487   VRPD  490


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1492  WFLKLPLC  1469
             WF+   LC
Sbjct  515   WFMEIRLC  522


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5923  SILCI  5937
             S LCI
Sbjct  62    SLLCI  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4832  TQMPV  4818
             T MPV
Sbjct  266   TKMPV  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7394  RQLL  7405
             RQLL
Sbjct  476   RQLL  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5793  STCGDG  5810
             S CG+G
Sbjct  493   SSCGEG  498


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8936  QLSGH  8922
             QL GH
Sbjct  690   QLTGH  694


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4479  QSGFLL  4462
             +SG+LL
Sbjct  184   ESGYLL  189


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4140  PVLRLG  4157
             P+LR G
Sbjct  230   PILRVG  235


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  7029  ILHGRVIVS  7003
             IL GR  VS
Sbjct  356   ILRGR-MVS  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3314  QATWIP  3331
             Q TW P
Sbjct  396   QGTWEP  401


>ref|NP_005017.3|  phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit 
delta isoform [Homo sapiens]
Length=1044

 GENE ID: 5293 PIK3CD | phosphoinositide-3-kinase, catalytic, delta polypeptide
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 5/19 (26%)
 Frame = -3

Query  6002  LWVHRHVWPKHYVPLYHML  5946
             LW HR     +Y PL+HML
Sbjct  49    LW-HRA----QYEPLFHML  62


 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6393  YPLSQFPYI  6419
             YPL QF YI
Sbjct  254   YPLCQFQYI  262


 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 12/24 (50%)
 Frame = +1

Query  8419  QQIGWE---Q-----HLE----TW  8454
             QQ GWE   Q     +LE    TW
Sbjct  155   QQLGWEAWLQYSFPLQLEPSAQTW  178


 Score = 22.7 bits (46),  Expect =   545
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 8/24 (33%)
 Frame = +2

Query  6575  EVVIRSVNFTDNAKTI-IVQLNTS  6643
             EVV RS    D   TI  +QLN S
Sbjct  826   EVVLRS----D---TIANIQLNKS  842


 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 8/28 (28%)
 Frame = +3

Query  1188  IRQGPK-------EPFRDYVDRFYKTLR  1250
             I QG K       E FR Y +R Y  LR
Sbjct  942   IQQG-KTNNSEKFERFRGYCERAYTILR  968


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6952  STIKQL  6935
             STIKQL
Sbjct  43    STIKQL  48


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  4637  PHPVYLP  4617
             PHPVY P
Sbjct  480   PHPVYYP  486


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2087  LNFPIS  2104
             LNFP+S
Sbjct  32    LNFPVS  37


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8874  REVLEWR  8894
             RE+LE R
Sbjct  512   REILERR  518


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +1

Query  5863  RKIVGHSLLW  5892
             RKI GH L W
Sbjct  641   RKI-GHFLFW  649


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4192  KFLLD  4178
             KFLLD
Sbjct  631   KFLLD  635


 Score = 18.5 bits (36),  Expect(2) =  6298
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6060  FHML  6049
             FHML
Sbjct  59    FHML  62


 Score = 18.5 bits (36),  Expect(2) =  6298
 Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 15/33 (45%)
 Frame = -1

Query  529  CSCPSICLQPSDVSNRPGLTAN----RSSSLLA  443
            CSC    L+        GLT       SSS LA
Sbjct  263  CSC----LHS-------GLTPHLTMVHSSSILA  284


 Score = 15.9 bits (30),  Expect(2) =  6298
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6032  LPILLLV  6012
             LP+L LV
Sbjct  96    LPVLRLV  102


 Score = 15.9 bits (30),  Expect(2) =  6298
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  387  FPIDLI  370
            F I+LI
Sbjct  323  FRIELI  328


 Score = 17.6 bits (34),  Expect(2) =  7609
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2362  FPEVLSSL  2339
             FPE L  L
Sbjct  542   FPEALARL  549


 Score = 16.3 bits (31),  Expect(2) =  7609
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2462  LHLRE  2448
             L+LRE
Sbjct  509   LQLRE  513


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5303  VVAEFLL  5283
             VV +FLL
Sbjct  20    VVVDFLL  26


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -3

Query  5141  PSVAL--GL  5121
             PSVAL  GL
Sbjct  658   PSVALRFGL  666


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3246  PHITM  3232
             PH TM
Sbjct  272   PHLTM  276


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1893  TVSSAPVS  1870
             TVSS  VS
Sbjct  357   TVSSSEVS  364


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7457  QHLLQL  7474
             Q LLQL
Sbjct  610   QYLLQL  615


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +2

Query  5174  EELKNEAVRHF  5206
             EE   EA  HF
Sbjct  1008  EE---EALKHF  1015


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2830  AARKRQL  2850
             AAR  QL
Sbjct  151   AARRQQL  157


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8160  HQYLRASHPL  8131
             H+YL  S PL
Sbjct  247   HEYLYGSYPL  256


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8796  YLAQLV  8779
             YL QLV
Sbjct  611   YLLQLV  616


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  248  AESCVE  231
            AE CVE
Sbjct  742  AEVCVE  747


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  433  CFNLY  419
            CF LY
Sbjct  391  CFALY  395


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8117  ELLGRRG  8137
             E L RRG
Sbjct  513   EILERRG  519


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4743  SEVHIP  4760
             SE H+P
Sbjct  653   SEMHVP  658


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6423  VPRLVLRF  6446
             VP   LRF
Sbjct  657   VPSVALRF  664


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1417  EFWLKQ  1434
             EFW K+
Sbjct  10    EFWTKE  15


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2290  FLYGKY  2273
             +LYG Y
Sbjct  249   YLYGSY  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6648  KLIVQ  6662
             KL+VQ
Sbjct  340   KLVVQ  344


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8132  CVPEV  8118
             C PEV
Sbjct  474   CLPEV  478


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5162  LELLE  5176
             LELL+
Sbjct  580   LELLD  584


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1856  KEALLD  1873
             K+ALL+
Sbjct  852   KDALLN  857


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8040  QISAKD  8023
             Q+S KD
Sbjct  206   QVSTKD  211


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2623  RHSYL  2637
             RH YL
Sbjct  246   RHEYL  250


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8258  IEVVQG  8275
             IE +QG
Sbjct  325   IELIQG  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8431  WEQHLE  8448
             W Q LE
Sbjct  371   WKQRLE  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8321  LERIL  8335
             LE IL
Sbjct  488   LEKIL  492


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3702  YQHTKEL  3722
             Y+H K+L
Sbjct  524   YEHEKDL  530


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7791  LNQFHKL  7771
             LN F KL
Sbjct  695   LNDFVKL  701


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2195  LVEICTE  2215
             L E+C E
Sbjct  741   LAEVCVE  747


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5354  YSTEE  5368
             YS EE
Sbjct  763   YSNEE  767


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4664  TPYVC  4678
             TPY C
Sbjct  811   TPYGC  815


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  4101  GHLPANFKRKY  4069
             GH   NFK K+
Sbjct  913   GHFLGNFKTKF  923


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7025  RIKQIIN  7045
             R+K  IN
Sbjct  108   RVKKLIN  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6026  LVNV  6037
             LVNV
Sbjct  191   LVNV  194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5743  LIERAED  5763
             L+E  ED
Sbjct  232   LVEQPED  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6029  VNVTE  6043
             V VTE
Sbjct  501   VHVTE  505


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7252  RSSTHQ  7269
             R STH+
Sbjct  673   RGSTHH  678


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  4702  FIDITMKAL  4728
             F D  MK L
Sbjct  751   FMDSKMKPL  759


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  2884  IELGKSDL  2907
             I+L KS++
Sbjct  837   IQLNKSNM  844


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7635  FGITR  7649
             FGI R
Sbjct  923   FGINR  927


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3171  PLILAY  3154
             P IL Y
Sbjct  931   PFILTY  936


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 4/10 (40%)
 Frame = +2

Query  995   RAYCTRPDER  1024
             R YC    ER
Sbjct  957   RGYC----ER  962


>ref|NP_001006659.1|  complement receptor type 2 isoform 1 precursor [Homo sapiens]
Length=1092

 GENE ID: 1380 CR2 | complement component (3d/Epstein Barr virus) receptor 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  292   HQ-SPPLASCRAR  257
             HQ  PPLA CR R
Sbjct  1018  HQWNPPLAVCRSR  1030


 Score = 25.7 bits (53),  Expect =    70
 Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 12/34 (35%)
 Frame = -1

Query  8452  RSRDAAPTLS--AAGSARLILSLT---VGHPITL  8366
             RSR  AP L   AAG   LIL LT   V   ITL
Sbjct  1028  RSRSLAPVLCGIAAG---LIL-LTFLIV---ITL  1054


 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/37 (32%), Positives = 13/37 (35%), Gaps = 18/37 (48%)
 Frame = +2

Query  3968  CTHLEGKVILVAVHVASGY-IEAEVIPAETGQETAYF  4075
             C H         VH+A GY I         G E  YF
Sbjct  602   CSH---------VHIANGYKI--------SGKEAPYF  621


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1492  WFLKLPLC  1469
             WF K PLC
Sbjct  766   WFKKIPLC  773


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 26/54 (48%)
 Frame = -1

Query  5389  LLAPFLALLCRVTPILL---C--RHPILKMDKQQLLQN---SYYGFHSCPSIPI  5252
             LL  FLAL   V P  L   C    PIL         N   SYY      S PI
Sbjct  6     LLGVFLAL---VAPGVLGISCGSPPPIL---------NGRISYY------STPI  41


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3019  DSKRTSTWS  3045
             DS  T TWS
Sbjct  328   DSQKTGTWS  336


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  5981  THACVPTDPNPQEVVLVNVTENF  6049
             T  C   DP+P+E V      NF
Sbjct  302   TYTC---DPDPEEGV------NF  315


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7097  IRCSSN  7114
             IRC SN
Sbjct  574   IRCTSN  579


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2762  KEPPFLWMG  2788
             KEPP L  G
Sbjct  227   KEPPILRVG  235


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3935  VDCSPG  3952
             VDC PG
Sbjct  873   VDCNPG  878


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -2

Query  1140  PGLSIFYK----FLLLG  1102
             PG+SI Y     +LL G
Sbjct  931   PGMSILYSCDQGYLLVG  947


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8676  DQGYL  8662
             DQGYL
Sbjct  940   DQGYL  944


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 15/35 (42%)
 Frame = +2

Query  6446  LKC---NNKTFNGT--GP---C---TNVSTVQCTH  6517
             L C     KT  GT  GP   C   T  S VQC H
Sbjct  323   LRCTVDSQKT--GTWSGPAPRCELST--SAVQCPH  353


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7088  SGQIRC  7105
             S QIRC
Sbjct  639   SSQIRC  644


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  890  HHAKHSGG  913
            HH  H GG
Sbjct  668  HHGRHTGG  675


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -2

Query  7842  PPTIIMN---------NFIY  7810
             PP +I N         NF Y
Sbjct  780   PPPVIVNGKHTGMMAENFLY  799


 Score = 17.6 bits (34),  Expect(2) =  9029
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6503  VQCTH  6517
             VQC H
Sbjct  600   VQCSH  604


 Score = 15.9 bits (30),  Expect(2) =  9029
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  572   STIRCT  577


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6831  PNCSLNLLAI  6802
             P C L LLA+
Sbjct  591   PLCKLSLLAV  600


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4807  QEKETGIW  4830
             Q+ E GIW
Sbjct  759   QDAENGIW  766


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +2

Query  590  LLCASKDR-----DK  619
            LLC  KD      DK
Sbjct  63   LLCITKDKVDGTWDK  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2850  GLSMTY  2867
             GLS TY
Sbjct  176   GLSVTY  181


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8910  AFHHVARE  8933
             AFH  ARE
Sbjct  1074  AFHLEARE  1081


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1534  CPSLP  1520
             CP LP
Sbjct  154   CPALP  158


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  31   GSSLAN  48
            G SLAN
Sbjct  289  GNSLAN  294


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9116  GSSLAN  9133
             G SLAN
Sbjct  289   GNSLAN  294


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  5843  TSQGAWCPISTP  5808
             TS+G W    TP
Sbjct  454   TSEGVW----TP  461


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7661  WDREI  7675
             WD EI
Sbjct  650   WDPEI  654


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6745  ISYFS  6731
             ISY+S
Sbjct  34    ISYYS  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  996   GPIAPG  1013
             G IAPG
Sbjct  171   GSIAPG  176


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -3

Query  8714  LIREVAL-CVVDPQ  8676
             LI E  L C VD Q
Sbjct  317   LIGESTLRCTVDSQ  330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  970  GIECIQC  990
            G E IQC
Sbjct  447  GEESIQC  453


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2054  GRNLLT  2071
             GR LLT
Sbjct  475   GRQLLT  480


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -3

Query  233  ER------APLVSLSL  204
            ER      APL  LSL
Sbjct  582  ERGTWSGPAPLCKLSL  597


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2299  TVFF  2288
             TVFF
Sbjct  677   TVFF  680


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5156  IHCVAPSV  5133
             IHC  P V
Sbjct  776   IHCHPPPV  783


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4128  PLSVC  4114
             PL VC
Sbjct  1023  PLAVC  1027


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1543  LAVCPS  1526
             LAVC S
Sbjct  1024  LAVCRS  1029


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7029  ILHGRV  7012
             IL GR+
Sbjct  29    ILNGRI  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4725  PHPRI  4739
             PHP I
Sbjct  352   PHPQI  356


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2527  SVQCAS  2544
             S+QC S
Sbjct  450   SIQCTS  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3726  PPIPLC  3709
             PP+P C
Sbjct  461   PPVPQC  466


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  11   VRPD  22
            VRPD
Sbjct  487  VRPD  490


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  9096  VRPD  9107
             VRPD
Sbjct  487   VRPD  490


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1492  WFLKLPLC  1469
             WF+   LC
Sbjct  515   WFMEIRLC  522


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5923  SILCI  5937
             S LCI
Sbjct  62    SLLCI  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4832  TQMPV  4818
             T MPV
Sbjct  266   TKMPV  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7394  RQLL  7405
             RQLL
Sbjct  476   RQLL  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5793  STCGDG  5810
             S CG+G
Sbjct  493   SSCGEG  498


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7199  PSYLL  7185
             P YLL
Sbjct  692   PGYLL  696


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8936  QLSGH  8922
             QL GH
Sbjct  749   QLTGH  753


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4479  QSGFLL  4462
             +SG+LL
Sbjct  184   ESGYLL  189


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4140  PVLRLG  4157
             P+LR G
Sbjct  230   PILRVG  235


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  7029  ILHGRVIVS  7003
             IL GR  VS
Sbjct  356   ILRGR-MVS  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3314  QATWIP  3331
             Q TW P
Sbjct  396   QGTWEP  401


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8355  TCHPSY  8338
             TC P Y
Sbjct  689   TCDPGY  694


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1088  CHPSYL  1071
             C P YL
Sbjct  690   CDPGYL  695


>ref|NP_078894.2|  NLR family member X1 isoform 1 [Homo sapiens]
Length=975

 GENE ID: 79671 NLRX1 | NLR family member X1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.9 bits (56),  Expect =    29
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  4066  CFLPCFCW  4043
             CFLP +CW
Sbjct  368   CFLPSYCW  375


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4544  IKVVPR  4561
             IKVVPR
Sbjct  556   IKVVPR  561


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8081  LRDLLL  8098
             LRDLLL
Sbjct  770   LRDLLL  775


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 9/22 (40%)
 Frame = +2

Query  5306  LFIH--FQNWVST*QNRRYSTE  5365
             LF H  FQN     Q  R+S E
Sbjct  679   LFFHYEFQN-----Q--RFSAE  693


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  4713  HYESPHPRISSEV  4751
             HYE    R S EV
Sbjct  682   HYEFQNQRFSAEV  694


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1048  ELLVPF  1065
             ELL+PF
Sbjct  192   ELLIPF  197


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2356  EVLSSL  2339
             EVLSSL
Sbjct  693   EVLSSL  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  8422  AAGSARLILSLT  8387
             A G AR + SLT
Sbjct  890   AEGGARVVVSLT  901


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  5779  EGEISALVE  5805
             EGE+ AL E
Sbjct  960   EGEVRALLE  968


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2244  IFEIFPSF  2221
             +FE FP F
Sbjct  619   VFELFPMF  626


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6385  TGLCND  6368
             TGLC D
Sbjct  256   TGLCSD  261


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = -3

Query  1514  ETLN-----NLSL  1491
             ETL+     NLSL
Sbjct  409   ETLDSTDPSNLSL  421


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3296  MFPMF  3282
             +FPMF
Sbjct  622   LFPMF  626


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7626  RDLLLQ  7609
             RDLLL+
Sbjct  771   RDLLLH  776


 Score = 18.9 bits (37),  Expect(2) =  6442
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7017  RVIVSL  7000
             RV+VSL
Sbjct  895   RVVVSL  900


 Score = 15.5 bits (29),  Expect(2) =  6442
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7096  LSTDGR  7079
             LS +GR
Sbjct  875   LSSEGR  880


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2397  FNPAGCG  2377
             FNP  CG
Sbjct  150   FNPDACG  156


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +3

Query  1335  LKALGPA-ATLEEMMTACQ  1388
             L  LGPA A L      CQ
Sbjct  202   LSSLGPAPASL------CQ  214


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  471  LRIVLAPC  448
            LR  LAPC
Sbjct  474  LRFFLAPC  481


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4137  KLLPL  4123
             KLLPL
Sbjct  542   KLLPL  546


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -1

Query  574  LY-NDLSS  554
            LY N+LSS
Sbjct  870  LYFNELSS  877


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3203  LLIVLH  3186
             LL VLH
Sbjct  237   LLFVLH  242


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2955  LVPLRSL  2935
             L PLR L
Sbjct  543   LLPLRAL  549


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3212  ALPLL  3198
             ALPLL
Sbjct  548   ALPLL  552


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7820  LFIMIVGGL  7846
             LF M  GGL
Sbjct  622   LFPMFMGGL  630


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4899  QLIHLYY  4919
             +L HLY+
Sbjct  866   ELLHLYF  872


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  1381  HVRE*EDPAIRQ  1416
             HV    DP IR+
Sbjct  110   HV----DPVIRE  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +2

Query  2057  RNLLTQIGCTLNFPI  2101
             R  L Q GC    PI
Sbjct  636   RAVLAQLGC----PI  646


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2100  LALLRLY  2120
             L LL LY
Sbjct  865   LELLHLY  871


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  783  RTLNAW  800
            R LN W
Sbjct  919  RNLNSW  924


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4610  HHLP  4599
             HHLP
Sbjct  5     HHLP  8


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = -2

Query  7443  ALSKLFCCCTIPDNNCLAC  7387
             ALS LF     PD    AC
Sbjct  145   ALSQLF----NPD----AC  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  567  LYNTVAT  587
            LY TV T
Sbjct  164  LYGTVGT  170


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2960  LTEVIPL  2980
             L EV PL
Sbjct  223   LKEVLPL  229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6273  LPLM  6262
             LPLM
Sbjct  227   LPLM  230


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8080  LERLTLD  8100
             LE L LD
Sbjct  244   LEHLNLD  250


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  8133  LR----PRSSTILVT  8101
             LR    P  S ILVT
Sbjct  276   LRKYMLPQAS-ILVT  289


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2062  ISSNYVDR  2039
             I S YV R
Sbjct  298   IPSKYVGR  305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -2

Query  6507  CTVLTFVHGPVP  6472
             C  L F H P P
Sbjct  378   CATLHFLHAPTP  389


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1060  VLVVPAM  1040
             V  VPAM
Sbjct  491   VFTVPAM  497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7493  QLQARILAVE  7522
             Q+ A IL VE
Sbjct  596   QMGASILGVE  605


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3564  PESCK  3550
             PE CK
Sbjct  764   PEACK  768


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  786  TLNAW  800
            TLN W
Sbjct  947  TLNPW  951


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6935  QLFN  6946
             QLFN
Sbjct  148   QLFN  151


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5934  AQNRVVVA  5911
             A+NR V A
Sbjct  633   AHNRAVLA  640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7333  VLGSSR  7350
             VLGS R
Sbjct  719   VLGSGR  724


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 7/25 (28%)
 Frame = -2

Query  8931  LGP------RDEML-GGCQTSTLTL  8878
             LGP      RD +L   CQ  TL L
Sbjct  762   LGPEACKDLRDLLLHDQCQITTLRL  786


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1264  EACSALR  1244
             EAC  LR
Sbjct  765   EACKDLR  771


 Score = 15.1 bits (28),  Expect(2) = 38427
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2363  LPRSLE  2346
             L R LE
Sbjct  354   LSRNLE  359


 Score = 15.1 bits (28),  Expect(2) = 38427
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2319  TNFLHL  2302
             T FL L
Sbjct  399   TSFLRL  404


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1790  RIQFLV  1773
             RI FL+
Sbjct  26    RIPFLI  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8021  RSLIEW  8004
             R L EW
Sbjct  84    RNLAEW  89


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  7537  STAPGDLGLL  7566
             ST P +L L+
Sbjct  413   STDPSNLSLM  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  740  HYRVILADL  714
            H R +LA L
Sbjct  634  HNRAVLAQL  642


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1335  LKALGPAA  1358
             L  LGP A
Sbjct  759   LNSLGPEA  766


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3491  VVTLTDTT  3514
             VV LT+ T
Sbjct  897   VVSLTEGT  904


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6089  PHASVL  6072
             P+AS+L
Sbjct  282   PQASIL  287


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = -1

Query  6229  LSFLHYHSPA----TTI  6191
             L FLH   PA    T I
Sbjct  381   LHFLHAPTPAGQTLTSI  397


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  8310  ILLGMWRIALQ  8278
             I LG+    LQ
Sbjct  506   IVLGLRKTTLQ  516


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2836  RKRQL  2850
             R RQL
Sbjct  833   RNRQL  837


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5168  LLEEL  5182
             LLE+L
Sbjct  966   LLEQL  970


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8027  RIRSLIEW  8004
             RI  LI W
Sbjct  26    RIPFLIHW  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3601  IRNHSS  3618
             IR H S
Sbjct  50    IRHHGS  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1492  WFLKLP  1475
             WF  LP
Sbjct  89    WFSRLP  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6081  ICSTMSFFH  6055
             +C T+ F H
Sbjct  377   VCATLHFLH  385


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3038  VLVLLESL  3015
             V VL+E L
Sbjct  796   VAVLMEGL  803


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3310  LASHLD  3327
             LA +LD
Sbjct  827   LAAQLD  832


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  8237  AEGTDRVIEVV  8269
             AEG  RV  VV
Sbjct  890   AEGGARV--VV  898


>sp|Q9NRA2.2|S17A5_HUMAN  RecName: Full=Sialin; AltName: Full=Solute carrier family 17 
member 5; AltName: Full=Sodium/sialic acid cotransporter; Short=AST; 
AltName: Full=Membrane glycoprotein HP59
Length=495

 GENE ID: 26503 SLC17A5 | solute carrier family 17 (anion/sugar transporter),
member 5 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect(2) =    38
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 8/31 (25%)
 Frame = +3

Query  1752  PQKQEPI---DKELYPLTSLRSLFGNDPSSQ  1835
             PQK+  I   +KE Y L SLR    N  SSQ
Sbjct  252   PQKHKRISHYEKE-YILSSLR----NQLSSQ  277


 Score = 17.6 bits (34),  Expect(2) =    38
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1945  NWRFY  1959
             NW FY
Sbjct  302   NWTFY  306


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  6773  RAKWN-NTL  6796
             RAKWN  TL
Sbjct  353   RAKWNFSTL  361


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +1

Query  4474  TLE--RTSKA  4497
             TLE  RTSKA
Sbjct  73    TLEDNRTSKA  82


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 23/45 (51%)
 Frame = +2

Query  5873  WVTVYYGVPVWKEATT---------TLFCASDAKAYDTEVHNVWA  5980
             W TV+Y       A           TLF    AK    EV+N WA
Sbjct  456   WQTVFY------IAAAINVFGAIFFTLF----AKG---EVQN-WA  486


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1211  GFLWSLSY  1188
             GFL SL Y
Sbjct  328   GFLSSLPY  335


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3377  GTIISL  3360
             GT+ISL
Sbjct  209   GTVISL  214


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8034  LSGTIC  8051
             LSG IC
Sbjct  216   LSGIIC  221


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  856  HYQKE  870
            HY+KE
Sbjct  260  HYEKE  264


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -1

Query  2011  SFMSTDFYEYLI  1976
             SF    FY Y I
Sbjct  114   SF----FYGYII  121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5822  GTMLLG  5839
             G MLLG
Sbjct  135   GKMLLG  140


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +1

Query  1495  ER--LLSVS  1515
             ER  LLS+S
Sbjct  194   ERSKLLSIS  202


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4107  KQYIL  4121
             K+YIL
Sbjct  263   KEYIL  267


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1269  EVKNW  1283
             EV NW
Sbjct  481   EVQNW  485


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  218  VSLSLSG  198
            +SL LSG
Sbjct  212  ISLPLSG  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4793  ICCYY  4779
             I CYY
Sbjct  219   IICYY  223


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5065  FIFFGVI  5045
             F FFG I
Sbjct  230   FYFFGTI  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1423  KTLALW  1406
             K L LW
Sbjct  287   KSLPLW  292


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1039  SLPLGSLI  1016
             SLPL   I
Sbjct  213   SLPLSGII  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8033  VPRIRSLI  8010
             V RI SLI
Sbjct  363   VRRIFSLI  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7678  VNFSVPL  7658
             VN SV L
Sbjct  58    VNLSVAL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -2

Query  6609  LSVKLTDLI---TT  6577
             LSV L D++   TT
Sbjct  60    LSVALVDMVDSNTT  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5497  KALGISY  5517
             K L ISY
Sbjct  197   KLLSISY  203


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  495  MFLTGQ  478
            M L GQ
Sbjct  342  MILSGQ  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4285  FSLI  4274
             FSLI
Sbjct  367   FSLI  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2851  PAVF  2840
             PAVF
Sbjct  375   PAVF  378


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8240  EGTDR  8254
             E TDR
Sbjct  15    ESTDR  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             +V+S T LE
Sbjct  67    MVDSNTTLE  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1608  LSFGVL  1591
             L FG+L
Sbjct  139   LGFGIL  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1788  PLTSLRSL  1811
             PL  LR L
Sbjct  163   PLIVLRAL  170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4010  VASGYI  4027
             VA G+I
Sbjct  380   VAAGFI  385


>ref|NP_055992.1|  protein deltex-4 [Homo sapiens]
 sp|Q9Y2E6.2|DTX4_HUMAN  RecName: Full=Protein deltex-4; Short=Deltex4; AltName: Full=RING 
finger protein 155
Length=619

 GENE ID: 23220 DTX4 | deltex homolog 4 (Drosophila) [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
 Frame = -1

Query  2914  PWVNLTCPIQFPH*LLYVID  2855
             PW++LT  I F     YVID
Sbjct  122   PWIDLT-SIGFS----YVID  136


 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1317  PDCKTI  1334
             PDCKTI
Sbjct  496   PDCKTI  501


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 5/19 (26%)
 Frame = -2

Query  5934  AQNRVVVASFHTGTP**TV  5878
             AQ RV +AS   G P  TV
Sbjct  303   AQSRVLIAS---GVP--TV  316


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3047  YYDPS  3061
             YYDPS
Sbjct  80    YYDPS  84


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6738  IFPIVTNALP  6709
             I+P VT  LP
Sbjct  160   IYPMVTGTLP  169


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/30 (33%), Positives = 13/30 (43%), Gaps = 11/30 (36%)
 Frame = +2

Query  2819  QPIVLPEKDSWTVNDIQKLVGKLNWASQIY  2908
             QP V P+           LVGKL    ++Y
Sbjct  426   QPTVKPD-----------LVGKLSRCGHVY  444


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6023  LLLVGW  6006
             LLLV W
Sbjct  546   LLLVAW  551


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5451  AIGTSS  5434
             AIGTSS
Sbjct  558   AIGTSS  563


 Score = 19.3 bits (38),  Expect(2) =  5019
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5358  RQRRAR  5375
             RQRR R
Sbjct  149   RQRRVR  154


 Score = 15.9 bits (30),  Expect(2) =  5019
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5234  QHIYE  5248
             QH YE
Sbjct  114   QHAYE  118


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6205  ENDNG  6219
             ENDNG
Sbjct  96    ENDNG  100


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  4710  HHYESPHPRI  4739
             H YE  HP I
Sbjct  115   HAYEKQHPWI  124


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7716  RKTSKK  7733
             RKT KK
Sbjct  377   RKTTKK  382


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1317  PDCKTI  1334
             P CKTI
Sbjct  465   PTCKTI  470


 Score = 17.6 bits (34),  Expect(2) = 16247
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5386  VDPRLEP  5406
             VD RL P
Sbjct  49    VDSRLAP  55


 Score = 15.1 bits (28),  Expect(2) = 16247
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5273  VEAIIR  5290
             +EA++R
Sbjct  30    IEAVVR  35


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827  GAPSPPPSP  5801
             G P  PP P
Sbjct  272   GSPASPPGP  280


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1586  KGRTPNE  1606
             KG TP E
Sbjct  386   KGKTPEE  392


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1345  WDQRL  1359
             WD RL
Sbjct  551   WDRRL  555


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4715  VMSIK  4701
             VMS+K
Sbjct  197   VMSVK  201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8449  TWKNM  8463
             T KNM
Sbjct  217   TRKNM  221


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7074  MPLPSVDKL  7100
             MP P V KL
Sbjct  221   MPPPGVVKL  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 9/17 (52%)
 Frame = +2

Query  7115  ITGLL---------LTR  7138
             ITG L         LTR
Sbjct  334   ITGILMSAAGLPVCLTR  350


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2682  PISKSD  2665
             P+SKS+
Sbjct  360   PVSKSE  365


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2623  RHSYL  2637
             RH YL
Sbjct  530   RHCYL  534


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2936  YIIAL  2922
             YII L
Sbjct  56    YIIDL  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2113  LNRAN  2099
             LNR N
Sbjct  292   LNRTN  296


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +1

Query  2371  RNTTSRRVKKEK  2406
             R TT    KK K
Sbjct  377   RKTTKKQAKKGK  388


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9033  PQSRPGH  9013
             P+S PGH
Sbjct  489   PHSLPGH  495


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1933  NDRGNW  1950
             ND G W
Sbjct  97    NDNGSW  102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4140  VKLLPL  4123
             VKL PL
Sbjct  227   VKLPPL  232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3091  GARPMD  3108
             GA P+D
Sbjct  236   GAKPLD  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6426  PRLVL  6440
             P LVL
Sbjct  352   PKLVL  356


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             P+SE G
Sbjct  535   PDSEKG  540


>pdb|2C0Y|A  Chain A, The Crystal Structure Of A Cys25ala Mutant Of Human 
Procathepsin S
Length=315


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 22/38 (57%)
 Frame = +2

Query  3014  RE-ILKE------PV-------H--------GVYYDPS  3061
             RE +LKE      PV       H        GVYY+PS
Sbjct  218   REDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPS  255


 Score = 23.1 bits (47),  Expect =   406
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 17/36 (47%)
 Frame = +2

Query  5183  KNE-AVRHFPR-IW--------LHGL----GQHIYE  5248
             KNE AVR   R IW        LH L    G H Y+
Sbjct  26    KNEEAVR---RLIWEKNLKFVMLHNLEHSMGMHSYD  58


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  7800  FVMLNQFHKLAH  7765
             FVML   H L H
Sbjct  42    FVML---HNLEH  50


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  2008  FMSTDFYEYLI  1976
             FM T F +Y I
Sbjct  168   FMTTAF-QYII  177


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3140  LKTGK  3154
             LKTGK
Sbjct  138   LKTGK  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2448  TEKY  2437
             TEKY
Sbjct  156   TEKY  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  5993  HRHVWPKHY  5967
             H H W K Y
Sbjct  11    HWHLWKKTY  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2047  HNWKK  2061
             H WKK
Sbjct  13    HLWKK  17


>ref|NP_078966.2|  mucin-16 [Homo sapiens]
Length=14507

 GENE ID: 94025 MUC16 | mucin 16, cell surface associated [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5992   CTHRPQPT  6015
              CTHRP PT
Sbjct  13862  CTHRPDPT  13869


 Score = 24.0 bits (49),  Expect(2) =   107
 Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 10/27 (37%)
 Frame = +1

Query  8920  TWPESCIRSTSRTA-----DIELATRD  8985
             TWPES  R   RT       IEL  RD
Sbjct  3998  TWPES-TR--ARTEPNSFLTIEL--RD  4019


 Score = 17.2 bits (33),  Expect(2) =   107
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9059  ISSCFL  9076
             ISS FL
Sbjct  4057  ISSSFL  4062


 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = -1

Query  8896  NLHSNTSLSGSSIP  8855
             NL S TSL  S IP
Sbjct  1194  NLPSTTSLTPSNIP  1207


 Score = 24.4 bits (50),  Expect =   168
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -2

Query  8895   TSTLTL-LSPGHPSHAGS------------QGVTSW  8827
              TSTLTL  SP     A S            Q VTSW
Sbjct  11888  TSTLTLTVSP-----AVSGLSSASITTDKPQTVTSW  11918


 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1725   RSGVETTT-PP  1754
              RSGV TTT PP
Sbjct  11615  RSGVPTTTIPP  11625


 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 4/27 (14%)
 Frame = +2

Query  3497  TLTDTTNQKTELQAIY--LALQDSGLE  3571
             T TDTT + T+L+  Y  LA   SG E
Sbjct  1385  TITDTTEHSTQLH--YTKLAEKSSGFE  1409


 Score = 23.5 bits (48),  Expect =   302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7793  ITNWLW  7810
             IT WLW
Sbjct  2048  ITSWLW  2053


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -1

Query  385   SHRSNSPPL  359
             SH SNSPPL
Sbjct  6140  SH-SNSPPL  6147


 Score = 23.5 bits (48),  Expect =   302
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +2

Query  8966  SSLLQGTFRWGL---SREAWPG  9022
             SS  QGTF   L   SR  WPG
Sbjct  8797  SS--QGTFT--LDTSSRASWPG  8814


 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5992   CTHRPQP  6012
              CTHRP P
Sbjct  12146  CTHRPDP  12152


 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5992   CTHRPQP  6012
              CTHRP P
Sbjct  13239  CTHRPDP  13245


 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5992   CTHRPQP  6012
              CTHRP P
Sbjct  13395  CTHRPDP  13401


 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 10/24 (41%)
 Frame = +3

Query  1689  RPEPTAPPEESFRSGVETT---TP  1751
             RPE  AP       G ETT   TP
Sbjct  1911  RPETSAP-------GAETTLTSTP  1927


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2843  DSWTVND  2863
             DSWTV D
Sbjct  3590  DSWTVTD  3596


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1437   SQVTNSAT  1460
              SQVT SAT
Sbjct  11633  SQVTSSAT  11640


 Score = 21.0 bits (42),  Expect(2) =   538
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  5816  STPIST  5799
             STPIST
Sbjct  3671  STPIST  3676


 Score = 16.8 bits (32),  Expect(2) =   538
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5693  SMITMDH  5673
             SM+  DH
Sbjct  3708  SMVSTDH  3714


 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +2

Query  5018  STI--LGTSSINNTK  5056
             STI  LGT SI  TK
Sbjct  345   STISSLGTPSI-STK  358


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -3

Query  4733  WMRAFIVMSIKP---SPS  4689
             WM     MS KP   SPS
Sbjct  2295  WMSS--AMSTKPTGASPS  2310


 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = -2

Query  8244  PS--ATAM-AVAL-SKLTALF  8194
             PS    AM    L SKLT LF
Sbjct  2997  PSKASSAMTSTSLASKLTTLF  3017


 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 6/21 (28%)
 Frame = -2

Query  3924   MASPFS*HLSQLATISFATTG  3862
              M S     LS+ A  SFATTG
Sbjct  10279  MPS-----LSE-AMTSFATTG  10293


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -3

Query  2456   LR--ELKNMHHP  2427
              LR  E  NMHHP
Sbjct  13490  LRYEE--NMHHP  13499


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -2

Query  8898  QTSTLTLLSP  8869
             QTS LT LSP
Sbjct  3072  QTSALT-LSP  3080


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +3

Query  2487  PYLV*TMRHQGLDISTM  2537
             PYL        LD STM
Sbjct  4401  PYL--------LDTSTM  4409


 Score = 20.2 bits (40),  Expect(2) =   780
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8970   LDVSSS  8953
              LDVSSS
Sbjct  10586  LDVSSS  10591


 Score = 16.8 bits (32),  Expect(2) =   780
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8867   VIHP  8856
              VIHP
Sbjct  10600  VIHP  10603


 Score = 20.6 bits (41),  Expect(2) =   934
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = +3

Query  1338  KALGPAATLEEMMT  1379
             KAL   AT E+ MT
Sbjct  9025  KAL-TSATIEDSMT  9037


 Score = 15.9 bits (30),  Expect(2) =   934
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1428  EAMSQVTNS  1454
             + M QV  S
Sbjct  9034  DSMTQVMSS  9042


 Score = 21.8 bits (44),  Expect =   981
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 12/26 (46%)
 Frame = -1

Query  6979  FSTPSTIKPSTIKQLC*ITVEKFPST  6902
             FST ST  PS           KFPST
Sbjct  2619  FSTVST-PPS-----------KFPST  2632


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  1053  TSTLQEQ  1073
             TSTLQE+
Sbjct  6237  TSTLQEH  6243


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1676  IPWPSL  1659
             +PWPSL
Sbjct  8547  VPWPSL  8552


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T FTSNP
Sbjct  9853  TVFTSNP  9859


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  820    FSSTTFT  800
              FSS TFT
Sbjct  10332  FSSSTFT  10338


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  1782   LYP---LTSLRS  1808
              LY    LTSLRS
Sbjct  12436  LYSGCRLTSLRS  12447


 Score = 19.7 bits (39),  Expect(2) =  1115
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2238  EIFPS  2224
             EIFPS
Sbjct  5116  EIFPS  5120


 Score = 16.3 bits (31),  Expect(2) =  1115
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2187  IFSSVN  2170
             IF S+N
Sbjct  5117  IFPSIN  5122


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  2436  ASPTSSTV  2413
             ASPTSS V
Sbjct  65    ASPTSSVV  72


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  2474  YTAFTIPSINNET  2512
             YT  T PSI  ET
Sbjct  1278  YTPLTFPSI--ET  1288


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 0/11 (0%)
 Frame = +3

Query  1032  GSDIAGTTSTL  1064
             GS++ GT STL
Sbjct  2440  GSNVGGTPSTL  2450


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 4/28 (14%)
 Frame = -3

Query  9035  LPSPAQATPPWKVPSGKSLVASSMSAVL  8952
             LPS    TP W   S  S V  SMS VL
Sbjct  4756  LPSSVAFTPQW--HSTSSPV--SMSSVL  4779


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = -2

Query  6912  SPPQL--KLCVTISGSP  6868
             SPP     L VTIS SP
Sbjct  7107  SPPPISSTLPVTISSSP  7123


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  477   PGLLETS  497
             PGL+ETS
Sbjct  9288  PGLMETS  9294


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = -3

Query  9053   GSEGSP--LPSPAQATP  9009
              G  G P  LPSPA A P
Sbjct  12525  GTSGTPFSLPSPATAGP  12541


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827   GAPSPPPSP  5801
              G PSP PSP
Sbjct  13151  GTPSPVPSP  13159


 Score = 18.9 bits (37),  Expect(2) =  1330
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  406    PGLNR  392
              PGLNR
Sbjct  12936  PGLNR  12940


 Score = 18.0 bits (35),  Expect(2) =  1330
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  12906  GCR---LTLLRP  12914


 Score = 18.0 bits (35),  Expect(2) =  1330
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  13218  GCR---LTLLRP  13226


 Score = 18.0 bits (35),  Expect(2) =  1330
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  13530  GCR---LTLLRP  13538


 Score = 18.0 bits (35),  Expect(2) =  1330
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  13686  GCR---LTLLRP  13694


 Score = 17.6 bits (34),  Expect(2) =  1330
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  12943  LYWE----LSQL  12950


 Score = 17.6 bits (34),  Expect(2) =  1330
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  13255  LYWE----LSQL  13262


 Score = 17.6 bits (34),  Expect(2) =  1330
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  13567  LYWE----LSQL  13574


 Score = 17.6 bits (34),  Expect(2) =  1330
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  13723  LYWE----LSQL  13730


 Score = 16.8 bits (32),  Expect(2) =  1330
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  388    FSHRS  374
              F HRS
Sbjct  12972  FTHRS  12976


 Score = 18.9 bits (37),  Expect(2) =  1573
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -2

Query  8265   TSITLSVPSATAMAV  8221
              TS   S+PS TA  V
Sbjct  12059  TS---SIPSSTAATV  12070


 Score = 18.5 bits (36),  Expect(2) =  1573
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6970  PSTIK  6956
             PSTIK
Sbjct  1262  PSTIK  1266


 Score = 16.8 bits (32),  Expect(2) =  1573
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6879  SGSPPE  6862
             SGS PE
Sbjct  1301  SGSSPE  1306


 Score = 16.3 bits (31),  Expect(2) =  1573
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8314   SYSSRY  8297
              SY  RY
Sbjct  12035  SYNRRY  12040


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  2894  PNSISPLT  2871
             PNS+S LT
Sbjct  3376  PNSVSSLT  3383


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  3491  VVTLTDTTNQKTE  3529
             V  LTD   +KTE
Sbjct  3379  VSSLTDKSKHKTE  3391


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 11/29 (37%)
 Frame = -3

Query  9041  SP---LPSPAQATPPWKVPSGKSLVASSM  8964
             SP   L SPA  TP        SL+ S +
Sbjct  5039  SPSSFLSSPAMTTP--------SLISSTL  5059


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +1

Query  16    TR---SEPGSSL  42
             TR   SEP SSL
Sbjct  7529  TRKIQSEPASSL  7540


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  9101  TR---SEPGSSL  9127
             TR   SEP SSL
Sbjct  7529  TRKIQSEPASSL  7540


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  338   HLSPSS  321
             HLSPSS
Sbjct  8657  HLSPSS  8662


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 7/27 (25%)
 Frame = -2

Query  4083   FKRKY---AVSCPV----SAGITSASI  4024
              + R Y   A S PV    S GI   SI
Sbjct  12036  YNRRYWTPATSTPVTSTFSPGISTSSI  12062


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -3

Query  7562   NPKSPGAVD  7536
              +PKSPG VD
Sbjct  12621  DPKSPG-VD  12628


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -3

Query  7562   NPKSPGAVD  7536
              +PKSPG VD
Sbjct  12776  DPKSPG-VD  12783


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  2735   VPT-STDVVS  2709
              VPT ST VVS
Sbjct  13913  VPTTSTGVVS  13922


 Score = 18.0 bits (35),  Expect(2) =  1885
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  12281  GCR---LTLLRP  12289


 Score = 17.6 bits (34),  Expect(2) =  1885
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +1

Query  1795  LPS-GHSLATTP  1827
             LP  G+SL T P
Sbjct  2907  LPTPGQSLNTIP  2918


 Score = 17.2 bits (33),  Expect(2) =  1885
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  1775  QGTVSFNFPQV  1807
             Q T  F F +V
Sbjct  2887  QSTLTFEFSEV  2897


 Score = 16.8 bits (32),  Expect(2) =  1885
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8817   LYWPL  8803
              LYW L
Sbjct  12318  LYWEL  12322


 Score = 19.7 bits (39),  Expect(2) =  1885
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1689   RPEPTAP  1709
              RP+PT P
Sbjct  13865  RPDPTGP  13871


 Score = 15.1 bits (28),  Expect(2) =  1885
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1725   RSGVETT  1745
              RS V TT
Sbjct  13910  RSSVPTT  13916


 Score = 17.6 bits (34),  Expect(2) =  2195
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8903  PPSISS  8920
             PP ISS
Sbjct  7108  PPPISS  7113


 Score = 16.8 bits (32),  Expect(2) =  2195
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8954  ELLTSS  8971
             EL TSS
Sbjct  7146  ELVTSS  7151


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4783  ITNLASPSG  4757
             IT L  PSG
Sbjct  3471  ITSLTNPSG  3479


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +2

Query  5015  IST-I--LGTSSINNT  5053
             IST I  +GT SI  T
Sbjct  3538  ISTTITTMGTNSISTT  3553


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -2

Query  4539  LLSCITTAPSP  4507
             LL  +TT PSP
Sbjct  6227  LL--VTTSPSP  6235


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 9/26 (34%)
 Frame = +3

Query  1701  TAP----PEE----SFRSGVETTTPP  1754
             T P    PE+    S R  VE T PP
Sbjct  8829  TTPMSRGPEDVSWPS-RPSVEKTSPP  8853


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3352   PSLSEIM  3372
              PSLSE M
Sbjct  10280  PSLSEAM  10286


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
 Frame = -2

Query  6627   TIMVLALSVKLTDLITTSSS  6568
              T MV A     T+L TT SS
Sbjct  11970  TTMVEA-----TNLATTGSS  11984


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +1

Query  8005   HSISERILGTY-LGR  8046
              HSI E  LG Y L R
Sbjct  13264  HSITE--LGPYTLDR  13276


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +1

Query  8005   HSISERILGTY-LGR  8046
              HSI E  LG Y L R
Sbjct  13576  HSITE--LGPYTLDR  13588


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +1

Query  8005   HSISERILGTY-LGR  8046
              HSI E  LG Y L R
Sbjct  13887  HSITE--LGPYTLDR  13899


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2084   TLNFPIS  2104
              TLNF IS
Sbjct  14078  TLNFTIS  14084


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -2

Query  5499   FCYETNLAM-------KATLF  5458
              FC  TNL M       KA LF
Sbjct  14249  FCLVTNLTMDSVLVTVKA-LF  14268


 Score = 17.6 bits (34),  Expect(2) =  2606
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 13/30 (43%)
 Frame = -2

Query  5490  ETNLAMKAT--LF--------TIAIGTSSF  5431
             ET    KAT  +F        T+AI T  F
Sbjct  7204  ETS---KATSPMFITSTQEDTTVAISTPHF  7230


 Score = 16.3 bits (31),  Expect(2) =  2606
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5422  FLDASR  5405
             FL+ SR
Sbjct  7230  FLETSR  7235


 Score = 18.5 bits (36),  Expect(2) =  2607
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  1692  PEPT--APP  1712
             PEPT   PP
Sbjct  6850  PEPTTSSPP  6858


 Score = 15.5 bits (29),  Expect(2) =  2607
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1734  VETT  1745
             VETT
Sbjct  6891  VETT  6894


 Score = 18.0 bits (35),  Expect(2) =  3051
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5283  MASTPA  5266
             M STPA
Sbjct  3564  MDSTPA  3569


 Score = 15.5 bits (29),  Expect(2) =  3051
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5333  TPNSE  5319
             TPN E
Sbjct  3554  TPNPE  3558


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  4696  PLAFP--ETYI  4670
             PL FP  ET I
Sbjct  1280  PLTFPSIETHI  1290


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = -3

Query  5369  SPLSSNA-YSAMSTPNSE  5319
             SP+S  A +  MSTP  E
Sbjct  1481  SPMSTFAIFPPMSTPSHE  1498


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 16/34 (47%)
 Frame = -1

Query  8905  RLSNLHSNTSLSGS-------------SIPCRLT  8843
             RL N + NT LS S             SIP  LT
Sbjct  1722  RL-NTQGNTALSSSLEPSYAEGSQMSTSIP--LT  1752


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2840  KDSWTV  2857
             KD WTV
Sbjct  2198  KDPWTV  2203


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1117  ISPTGIGGL  1091
             ISPT I G+
Sbjct  2391  ISPTSISGM  2399


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -2

Query  2448  TEK---YASPTSST  2416
             TEK   + SPT ST
Sbjct  3036  TEKETSFLSPTAST  3049


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
 Frame = +3

Query  864   EGAT-PQD--LNTM  896
             +GAT PQ+  L TM
Sbjct  3755  QGATTPQELTLETM  3768


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  6990  TLKEVTQSPS  7019
             T KEVT S S
Sbjct  3893  TIKEVTSSSS  3902


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  1736  RDNNSPSEA  1762
             R  +SPSEA
Sbjct  4067  RSSDSPSEA  4075


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1026  VLSSGLV  1006
             VL SGLV
Sbjct  4485  VLTSGLV  4491


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = -1

Query  391   IFSH---R-SNSPPL  359
             IFS    R SNSPP+
Sbjct  4658  IFSVASSRLSNSPPM  4672


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 10/26 (38%)
 Frame = -2

Query  6603  VKLTD-LIT-----TSSSARLP-FNS  6547
             VK TD L T     TSS   LP F S
Sbjct  5077  VKITDILRTRLEPVTSS---LPNFSS  5099


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  9035  LPSPAQATPP  9006
             +PSPA   PP
Sbjct  6806  MPSPAMTSPP  6815


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +3

Query  939   KETINEEAAEWDRVHP  986
             K+T N EA     VHP
Sbjct  7167  KDTTNTEA-----VHP  7177


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -3

Query  2903  SDLPNSIS----PLTS  2868
             S LP SIS    P TS
Sbjct  7988  STLPESISSSPLPVTS  8003


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -2

Query  4542  SLLSCI--TTAPSP  4507
             SLLS    TT PSP
Sbjct  8268  SLLS-LPATTSPSP  8280


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3532  TSNLSS  3549
             TSNLSS
Sbjct  8322  TSNLSS  8327


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  2223  FSISVQISTNA  2191
             F IS  IST A
Sbjct  8467  FTISPDISTEA  8477


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  586   VATVLYNDLSSS  551
             V TV Y  LS S
Sbjct  8650  VGTVIYKHLSPS  8661


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -2

Query  6606  SVKLTDLITT  6577
             SV L DL+TT
Sbjct  8662  SV-LADLVTT  8670


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4554  TTFMS  4540
             TTFMS
Sbjct  9100  TTFMS  9104


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7900  LPNSIH  7883
             LP+SIH
Sbjct  9163  LPDSIH  9168


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +3

Query  1425   AEAM--SQVTNSAT  1460
              AE +  SQVT S T
Sbjct  10733  AEDLVTSQVTSSGT  10746


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6594   TDLITTSSSA  6565
              T L  TSSSA
Sbjct  11875  TGLLATSSSA  11884


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +2

Query  5327   WVST*Q----NRRYST  5362
              W+ST      NRRY T
Sbjct  12029  WIST--TSSYNRRYWT  12042


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 12/26 (46%)
 Frame = -2

Query  6840   LLFPNCSLNLL------------AIC  6799
              LL+  C L LL            AIC
Sbjct  12591  LLYSGCRLTLLRSEKDGAATGVDAIC  12616


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 12/26 (46%)
 Frame = -2

Query  6840   LLFPNCSLNLL------------AIC  6799
              LL+  C L LL            AIC
Sbjct  12902  LLYSGCRLTLLRPEKNGAATGMDAIC  12927


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8290   NSSTSSLY  8267
              N S SSLY
Sbjct  13365  NTSVSSLY  13372


 Score = 18.0 bits (35),  Expect(2) =  3567
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  6591  DLITTS--SS  6568
             DLI TS  SS
Sbjct  2372  DLINTSIASS  2381


 Score = 16.8 bits (32),  Expect(2) =  3567
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  388    FSHRS  374
              F HRS
Sbjct  13128  FTHRS  13132


 Score = 16.3 bits (31),  Expect(2) =  3567
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  406    PGLNR  392
              PGL+R
Sbjct  13092  PGLDR  13096


 Score = 15.1 bits (28),  Expect(2) =  3567
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6723  TNALP  6709
             TN LP
Sbjct  2360  TNELP  2364


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +2

Query  833  RSDTHVFSIIRRSHPTR  883
            RS  +V S    SHPTR
Sbjct  469  RSPSQVSS----SHPTR  481


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  7904  YSPLSF---QTH  7930
             Y PL F   +TH
Sbjct  1278  YTPLTFPSIETH  1289


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = -3

Query  2915  SLGKS-DL---PNSISPLT  2871
             SLG   DL   P  I PLT
Sbjct  1525  SLGRTGDLTTVP--ITPLT  1541


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 11/31 (35%)
 Frame = -1

Query  7669  SVPL--HPGRVIPNLFQRFITPTSIPRHSSG  7583
             S+PL  HP     N      T TSIP  S G
Sbjct  2204  SIPLGSHP---TTN------TETSIPVNSAG  2225


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  4198  SLQSPKSRS  4224
             SL+SP  RS
Sbjct  3315  SLESPTARS  3323


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1686  SRPEPT  1703
             SRP+PT
Sbjct  3801  SRPDPT  3806


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1437  SQVTNSAT  1460
             SQV  SAT
Sbjct  4315  SQVASSAT  4322


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1053  TSTLQEQ  1073
             TSTLQ Q
Sbjct  4468  TSTLQGQ  4474


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  5369  SP---LSSNAYSAMSTP  5328
             SP   LSS    AM TP
Sbjct  5039  SPSSFLSS---PAMTTP  5052


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8954  ELLTSSL  8974
             EL TSSL
Sbjct  5977  ELVTSSL  5983


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 12/27 (44%)
 Frame = -2

Query  8841  GVTSWCSLLYWPLLSYLAQLVLACSTI  8761
             GVTS            L QL L  STI
Sbjct  6163  GVTS------------LGQLTLDTSTI  6177


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKGTS S
Sbjct  6659  LKGTSTS  6665


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1686  SEENSLA  1666
             SEE SLA
Sbjct  7550  SEETSLA  7556


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4383  MSTILS  4366
             MST+LS
Sbjct  7848  MSTVLS  7853


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
 Frame = -2

Query  4563  LLGTT---FMSLLSC-ITTAPSP  4507
             LL  T   F SL+S   TT PSP
Sbjct  7964  LLEKTRPSF-SLMSSPATTSPSP  7985


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4383  MSTILS  4366
             MST+LS
Sbjct  8138  MSTVLS  8143


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  124   TLVTRDPSD  150
             TLV R P D
Sbjct  8243  TLVSRSPGD  8251


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -2

Query  7611  QLAFQGTAVVQM  7576
             QL  + TAV QM
Sbjct  8933  QLS-ENTAVTQM  8943


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  976   LSHSAASSLM  947
             LSHS    LM
Sbjct  9697  LSHSEMTNLM  9706


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  4786  VITNLASPSGMCTSE  4742
             VIT L S S M  SE
Sbjct  9938  VITRLSSSSMM--SE  9950


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  16     TRSEPGSSL  42
              T  EPG SL
Sbjct  10064  TSTEPGTSL  10072


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  9101   TRSEPGSSL  9127
              T  EPG SL
Sbjct  10064  TSTEPGTSL  10072


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1437   SQVTNSAT  1460
              SQVT S T
Sbjct  11406  SQVTSSGT  11413


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 2/17 (11%)
 Frame = -3

Query  9053   GSEGSP--LPSPAQATP  9009
              G  G P  LPSP  A P
Sbjct  12992  GTSGTPSSLPSPTTAVP  13008


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -1

Query  967    SAASSLMV----SFNI  932
              SAAS L+V     F I
Sbjct  13628  SAASPLLVLFTLNFTI  13643


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  2377   TTSRRVKKE  2403
              TT RR KKE
Sbjct  14477  TTRRR-KKE  14484


 Score = 16.8 bits (32),  Expect(2) =  4837
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6967  STIKPST  6947
             STI P T
Sbjct  2534  STIEPAT  2540


 Score = 16.8 bits (32),  Expect(2) =  4837
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6236  NCSFNISTSI  6265
             N SF   TSI
Sbjct  6961  NASFSTDTSI  6970


 Score = 16.3 bits (31),  Expect(2) =  4837
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2279  AIKKKDST  2302
             AI   DST
Sbjct  1508  AIRNTDST  1515


 Score = 15.9 bits (30),  Expect(2) =  4837
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2171  LTEE  2182
             LTEE
Sbjct  1465  LTEE  1468


 Score = 15.5 bits (29),  Expect(2) =  4837
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7082  EGHTLL  7065
             E H LL
Sbjct  2527  EAHSLL  2532


 Score = 15.5 bits (29),  Expect(2) =  4837
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6330  ILPAIS  6347
             +LP IS
Sbjct  7004  VLPEIS  7009


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4748  STHPTR  4765
             S HPTR
Sbjct  476   SSHPTR  481


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  7615  TPTSIPRHSSGA  7580
             TP  IP   SGA
Sbjct  1202  TPSNIP--TSGA  1211


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2362  SSIRNTTS  2385
             S IRNT S
Sbjct  1507  SAIRNTDS  1514


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5542  VAVSAS  5525
             VAVSAS
Sbjct  2008  VAVSAS  2013


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5359  RVTPI  5345
             RVTPI
Sbjct  2287  RVTPI  2291


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6973  TPSTIKPSTI  6944
             TPST  P TI
Sbjct  2446  TPSTLPPFTI  2455


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4527  ITTAPSP  4507
             +TTAP P
Sbjct  3530  VTTAPTP  3536


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  7585  GANEFSRATPNPQ  7547
             G N  S  TPNP+
Sbjct  3546  GTNSISTTTPNPE  3558


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3536  LVTQSSD  3516
             LVT SSD
Sbjct  3642  LVTPSSD  3648


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  3714  KE---LEEMN  3734
             KE   L+EMN
Sbjct  4604  KENSTLQEMN  4613


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 10/25 (40%)
 Frame = -3

Query  9032  PSPAQATPPWKVP---SGKSLVASS  8967
             P PAQ T   K P   S    VASS
Sbjct  4647  PTPAQST---KFPDIFS----VASS  4664


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  841   ITSGLKAFSST  809
             +TS L  FSST
Sbjct  5090  VTSSLPNFSST  5100


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -3

Query  8990  GKSLVASSMSAVL  8952
             G SL A  MS VL
Sbjct  8131  GTSL-ATEMSTVL  8142


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  2433  SPTSST-VTDF  2404
             SP SST V DF
Sbjct  8279  SPVSSTLVEDF  8289


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4643  SNPHPV  4626
             S PHPV
Sbjct  8585  SSPHPV  8590


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  856   AENMGITS  833
             A NM ITS
Sbjct  9489  APNMNITS  9496


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +2

Query  1346  GTSGYTRRNDDSMS  1387
             G SG TR   +SMS
Sbjct  9566  GSSGITRIEIESMS  9579


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  847   MGITS  833
             MGITS
Sbjct  9843  MGITS  9847


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -2

Query  4542   SLLS-CITTAPS  4510
              SLLS  +TT PS
Sbjct  10023  SLLSLPVTTSPS  10034


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8984   SLVASS  8967
              SLVASS
Sbjct  10990  SLVASS  10995


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2576   QSSMT  2590
              QSSMT
Sbjct  13443  QSSMT  13447


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -3

Query  2456   LR--ELKNMHHP  2427
              LR  E  NM+HP
Sbjct  13646  LRYEE--NMQHP  13655


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5992   CTHRPQP  6012
              CTH P P
Sbjct  13707  CTHHPDP  13713


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 6/26 (23%)
 Frame = +2

Query  2036   TPVNIIG----RNLLTQIGCTLNFPI  2101
              TP  I G      LL     TLNF I
Sbjct  13776  TPASIFGPSAASHLLILF--TLNFTI  13799


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -2

Query  8274  PCTTS----ITLSVPS  8239
             P  TS    IT SVPS
Sbjct  549   PASTSVAAPITTSVPS  564


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  7889  RVRQGYSPLSFQTH  7930
             RVR   SPL   TH
Sbjct  784   RVRNATSPL---TH  794


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = -1

Query  835  SGLK-AFSSTT-FTHAF  791
            SG K  FSS T  TH F
Sbjct  844  SGVKTTFSSSTPSTHLF  860


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7015  PPMQNKT  7035
             PPM N T
Sbjct  1629  PPMDNTT  1635


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2914  PWVNLT  2897
             PW+ LT
Sbjct  1829  PWISLT  1834


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  3682  KGLSGMGTSTQ  3714
             K LS MG ST+
Sbjct  1884  KSLS-MGNSTH  1893


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2555  SIPVE  2541
             SIPVE
Sbjct  1940  SIPVE  1944


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7618  ITPTSI  7601
             I PTSI
Sbjct  2391  ISPTSI  2396


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  5369  SP-LSSNAYS  5343
             SP  SSN YS
Sbjct  2427  SPSVSSNTYS  2436


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6987  ITLKEVTQSPSH  7022
             IT   VT+SP H
Sbjct  2712  ITIQGVTESPLH  2723


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  677   STASSS  694
             STASSS
Sbjct  2923  STASSS  2928


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1058  TSSSCYVTSP  1029
             TSS   VTSP
Sbjct  3482  TSSASSVTSP  3491


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  1080  WMTNNPPI  1103
             WMT  PP+
Sbjct  5323  WMT-TPPV  5329


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3955  MATRLYT  3975
             M TRL+T
Sbjct  5547  MITRLFT  5553


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  1080  WMTNNPPI  1103
             WMT  PP+
Sbjct  5619  WMT-TPPV  5625


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = -1

Query  7192  ISSSRSEDLGLIVAITTIS  7136
             I SSR          TTIS
Sbjct  5820  ITSSR----------TTIS  5828


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  8993  SGKSLVASSM  8964
             SG S V  SM
Sbjct  6338  SGDSIVSTSM  6347


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -2

Query  4638  SSSCLLATQSSPAI  4597
             SSS LL   S PAI
Sbjct  6510  SSSSLL---SLPAI  6520


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2093  FPISPI  2110
             FP SPI
Sbjct  7312  FPTSPI  7317


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  3774  STFLIPALTN  3745
             ST L PAL N
Sbjct  7520  ST-LTPALSN  7528


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  605   KDRDKRHQGS  634
             KDR+K H  S
Sbjct  8634  KDREKIHPSS  8643


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 15/29 (51%)
 Frame = -3

Query  9041  SPLP----SPAQATPPWKVPSGKSLVASS  8967
             SPL     SP         PS  SLV SS
Sbjct  9423  SPLSVEKNSP---------PS--SLVSSS  9440


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  1048  PAMSLPLGSLIWPG  1007
             P   LP  SLI PG
Sbjct  9751  PSSPLPVTSLILPG  9764


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = +3

Query  885    LNTM--LNTVGGHQAAMQM  935
              L T+  LN      A MQM
Sbjct  10503  LGTLTPLN------ASMQM  10515


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 12/36 (33%)
 Frame = -2

Query  8949   STPDA----ALGPRDEMLGGCQTST--LTLLSPGHP  8860
              S PDA    A  PR E       S   LT  SPG P
Sbjct  11711  SSPDATPVMATSPRTE------ASSAVLTTISPGAP  11740


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  171    ISSSGARTGT  200
              I SSGA T T
Sbjct  11747  ITSSGAATST  11756


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827   GAPSPPPSP  5801
              G PS  PSP
Sbjct  12214  GTPSSSPSP  12222


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7562   NPKSPG  7545
              +PKSPG
Sbjct  12307  DPKSPG  12312


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  406    PGLNR  392
              PGLNR
Sbjct  12311  PGLNR  12315


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -1

Query  8884   NTSL----SGSSIPCRLT  8843
              NTS     SG    CRLT
Sbjct  12430  NTSVGPLYSG----CRLT  12443


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7562   NPKSPG  7545
              +PKSPG
Sbjct  12465  DPKSPG  12470


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  406    PGLNR  392
              PGLNR
Sbjct  12469  PGLNR  12473


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7562   NPKSPG  7545
              +PKSPG
Sbjct  12932  DPKSPG  12937


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7562   NPKSPG  7545
              +PKSPG
Sbjct  13400  DPKSPG  13405


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7562   NPKSPG  7545
              +PKSPG
Sbjct  13556  DPKSPG  13561


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 7/21 (33%)
 Frame = -2

Query  4506   FQRSFAGPF----QSGFLLSL  4456
              FQ S  GPF    Q   L SL
Sbjct  14114  FQKSSMGPFYLGCQ---LISL  14131


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = -1

Query  6235   FYLSF----LHYHS-----PATT  6194
              FYL F    L Y S     P TT
Sbjct  14323  FYLNFTITNLPY-SQDKAQPGTT  14344


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2340  RELKTSG  2360
             REL T G
Sbjct  481   RELRTTG  487


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8920  TWPE  8931
             TWPE
Sbjct  966   TWPE  969


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7781  STNLPI  7764
             STN PI
Sbjct  1037  STNIPI  1042


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +1

Query  8938  IRSTSRTADIELAT  8979
             IRS  RT D  L T
Sbjct  1523  IRSLGRTGD--LTT  1534


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7851  PTKPPTII  7828
             P  PPTI+
Sbjct  1966  PITPPTIV  1973


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
 Frame = -2

Query  6609  LSVKLTDLITTSSSAR  6562
             L  KLT L  T   AR
Sbjct  3009  LASKLTTLFSTGQAAR  3024


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7851  PTKPPTIIM  7825
             PTK PT  M
Sbjct  3269  PTKSPTENM  3277


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = -2

Query  1899  SNTVSSAPVSNRASFS  1852
             S+T  S P+S    FS
Sbjct  3666  SDTTASTPIS---TFS  3678


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2894  PNSISPLTSV  2865
             P S  P TSV
Sbjct  4183  PSSTPPVTSV  4192


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
 Frame = +3

Query  6669  TTIQEKESVSREDQGEHLLQ  6728
             TT  E E VS  +QG   LQ
Sbjct  4296  TT--EIETVSSVNQG---LQ  4310


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  7213  TSPIVPHISSS  7181
             TSP VP   SS
Sbjct  4565  TSPMVP--ASS  4573


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1056  STLQE  1070
             STLQE
Sbjct  4607  STLQE  4611


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2520  LDIST  2534
             LDIST
Sbjct  4950  LDIST  4954


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2492  PSINNE  2509
             PSIN E
Sbjct  5119  PSINTE  5124


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = -1

Query  7192  ISSSRSEDLGLIVAITTIS  7136
             ISSSR          T IS
Sbjct  5524  ISSSR----------TSIS  5532


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  6977  EGSNNTEGSDTI  7012
             E S NTE   TI
Sbjct  5997  EASTNTE---TI  6005


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3047  YYDP  3058
             YYDP
Sbjct  6115  YYDP  6118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  8680  GSTTHK--ATS  8706
             GST HK   TS
Sbjct  6567  GSTSHKIPTTS  6577


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6669  TTIQEKES  6692
             TT  EKES
Sbjct  6599  TTTSEKES  6606


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1400  SSYSLT  1383
             S YSLT
Sbjct  6945  STYSLT  6950


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8127  PRSSTILVTI  8098
             P SST  VTI
Sbjct  7110  PISSTLPVTI  7119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = +3

Query  6675  IQEKESVS------RE  6704
             IQ KES+S      RE
Sbjct  7236  IQ-KESISSLSPKLRE  7250


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 12/28 (42%)
 Frame = -2

Query  8892  STLTLLSPGHP--SHAGSQGVTSWCSLL  8815
             STL       P  SH  S  VT   SLL
Sbjct  7409  STL-------PASSHSSSASVT---SLL  7426


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6638  TSVEI  6652
             TSVEI
Sbjct  7454  TSVEI  7458


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  973   SHSAASSLM  947
             SHS  S LM
Sbjct  7942  SHSQMSTLM  7950


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
 Frame = -2

Query  3480  PLLV-TYPAFPNLVSLLAAPST  3418
             PLL  T P F    SL+  P T
Sbjct  7963  PLLEKTRPSF----SLMSSPAT  7980


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6638  TSVEI  6652
             TSVEI
Sbjct  8033  TSVEI  8037


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7140  MVVIATM  7160
             MV+  TM
Sbjct  8087  MVITSTM  8093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = -2

Query  6615  LALS-VKLTDLITTSS  6571
             L L  VK TD+  TSS
Sbjct  8594  LTLGPVKTTDMLRTSS  8609


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1349  TSGYT  1363
             TSGYT
Sbjct  9230  TSGYT  9234


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  1917  PGKLISSNTVSS  1882
             P  L+SS  V S
Sbjct  9433  PSSLVSSSSVTS  9444


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6638  TSVEI  6652
             TSVEI
Sbjct  9789  TSVEI  9793


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4421   QITKIQN  4441
              +ITKI N
Sbjct  10432  HITKIPN  10438


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2822   PIVLPE  2839
              P VLPE
Sbjct  10978  PTVLPE  10983


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  882    DLNTMLNTV  908
              +L+TM  TV
Sbjct  11288  ELDTMPSTV  11296


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1167   SPTSIL  1184
              SPT IL
Sbjct  11963  SPTTIL  11968


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7174   EDLGL  7160
              EDLGL
Sbjct  12153  EDLGL  12157


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  12478  WELSQ  12482


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  12634  WELSQ  12638


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = -3

Query  9053   GSEGSP--LPSPAQATP  9009
              GS G P  LPSP  A P
Sbjct  12681  GS-GTPSSLPSPTTAGP  12696


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  12789  WELSQ  12793


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 2/17 (11%)
 Frame = -3

Query  9053   GSEGSP--LPSPAQATP  9009
              G  G P  LPSP  A P
Sbjct  12836  GTSGTPSSLPSPTSAGP  12852


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  12945  WELSQ  12949


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  13257  WELSQ  13261


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5992   CTHRPQP  6012
              CT RP P
Sbjct  13551  CTYRPDP  13557


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  13569  WELSQ  13573


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3147   QENMQ  3161
              +ENMQ
Sbjct  13649  EENMQ  13653


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  13725  WELSQ  13729


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6413   WELAQ  6399
              WEL Q
Sbjct  14164  WELSQ  14168


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1382  MSGSRRT  1402
             M GSR T
Sbjct  18    MTGSRST  24


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  5819  IST--PISTSA  5793
             IST  P S SA
Sbjct  278   ISTSAPLSSSA  288


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6251  ISTSI  6265
             ISTSI
Sbjct  720   ISTSI  724


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5103  RWNKP  5117
             RWN P
Sbjct  1189  RWNMP  1193


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             HAS ESP
Sbjct  1256  HASSESP  1262


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3178  VGTPHS  3161
             V TPHS
Sbjct  1338  VSTPHS  1343


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  5454  IA---IGTSS  5434
             IA   IGTSS
Sbjct  1647  IAHLPIGTSS  1656


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 17/39 (43%)
 Frame = -1

Query  868   PSDNAENMGITSGLKAFSS------TT---F----THAF  791
             PSD AE     S    FS       TT   F    TH F
Sbjct  2240  PSDGAESIPTVS----FSPSPDTEVTTISHFPEKTTHSF  2274


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3251  SFPILL  3234
             SFP LL
Sbjct  2639  SFPTLL  2644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  25    EPGSSLA  45
             EP SSLA
Sbjct  2656  EPTSSLA  2662


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9110  EPGSSLA  9130
             EP SSLA
Sbjct  2656  EPTSSLA  2662


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = -2

Query  3585  VTMFTSN-PESCKAR  3544
             V M T   PES  AR
Sbjct  3992  VSMSTTTWPESTRAR  4006


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  25    EPGSSL  42
             EPG SL
Sbjct  4212  EPGTSL  4217


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9110  EPGSSL  9127
             EPG SL
Sbjct  4212  EPGTSL  4217


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6632  LNTSVE  6649
             LNTS E
Sbjct  4497  LNTSME  4502


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2080  TNLSQQISS  2054
             T  SQ+I S
Sbjct  4900  TSISQEITS  4908


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  867   GATPQDLNTM  896
             GAT QD  TM
Sbjct  4982  GATSQDTFTM  4991


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +1

Query  8689  THKATSLISRTT  8724
             T KAT L S TT
Sbjct  5446  TSKATPLMS-TT  5456


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  917   SSSHAN  934
             SSSH N
Sbjct  6138  SSSHSN  6143


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  8948  LQELLTSSL  8974
             LQE  TSSL
Sbjct  6240  LQEHSTSSL  6248


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1691  SALKKI  1674
             SA+KKI
Sbjct  6351  SAMKKI  6356


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7681  LHKLNT  7698
             LHKL T
Sbjct  6678  LHKLTT  6683


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5266  PSIPIS  5249
             PS PIS
Sbjct  6719  PSLPIS  6724


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -2

Query  1905  ISSN---TVSSAP  1876
             ISS    T+SS P
Sbjct  7111  ISSTLPVTISSSP  7123


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  2380  TSRRVKKEKIS  2412
             TSR + KE IS
Sbjct  7233  TSR-IQKESIS  7242


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -2

Query  7578  MSFPEQ---PQ------IPR  7546
             MS PEQ    Q      IPR
Sbjct  7587  MSGPEQSTMSQDISIGTIPR  7606


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1408  WPGPP  1394
             WP PP
Sbjct  7675  WPSPP  7679


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9032  PSPAQAT  9012
             P PAQ T
Sbjct  7872  PGPAQST  7878


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 4/18 (22%)
 Frame = +3

Query  1056  STLQEQIGWMTNNPPIPV  1109
             STL E I       P PV
Sbjct  7988  STLPESI----SSSPLPV  8001


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8826  TSLLHP  8843
             TSLL P
Sbjct  8297  TSLLNP  8302


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9032  PSPAQAT  9012
             P PAQ T
Sbjct  8754  PGPAQST  8760


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8675  IKDILS  8658
             IKDI S
Sbjct  8975  IKDIVS  8980


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -2

Query  6603  VKLTDLITTSS  6571
             VK T+L  TSS
Sbjct  9183  VKTTELLGTSS  9193


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9032  PSPAQAT  9012
             P PAQ T
Sbjct  9334  PGPAQST  9340


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9032  PSPAQAT  9012
             P PAQ T
Sbjct  9629  PGPAQST  9635


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  7100  RCSSNITGLLLT  7135
             R SS  T L LT
Sbjct  9725  RSSSSLTSLPLT  9736


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5469   ATLFTIA  5449
              ATL TIA
Sbjct  10315  ATLSTIA  10321


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  171    FSTLTK  154
              F TLTK
Sbjct  10667  FPTLTK  10672


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  562    LSSSDP  545
              LSSS+P
Sbjct  11118  LSSSEP  11123


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8942   GVLQELLTSS  8971
              GVL  L TSS
Sbjct  11317  GVLTSLVTSS  11326


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/22 (31%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = -1

Query  7618   ITPTSIPRHSSGANEFSRATPN  7553
              +T T +P          R TPN
Sbjct  11356  VTSTTVP----------RTTPN  11367


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7456   TASVATH  7476
              TAS ATH
Sbjct  11659  TASSATH  11665


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  480    GLLET  494
              GLLET
Sbjct  11870  GLLET  11874


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8680   HRSRIS  8663
              HRS IS
Sbjct  12026  HRSWIS  12031


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1349   TSGYTRR  1369
              TS Y RR
Sbjct  12033  TSSYNRR  12039


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  12077  TLNFTI  12082


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  388    FSHRSNSP  365
              F HRS  P
Sbjct  12191  FTHRSSMP  12198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  12233  TLNFTI  12238


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  12391  TLNFTI  12396


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  12547  TLNFTI  12552


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  12702  TLNFTI  12707


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  12858  TLNFTI  12863


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  13014  TLNFTI  13019


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  13170  TLNFTI  13175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  13326  TLNFTI  13331


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  13374  GCR---LTLLRP  13382


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7896   LTLFTI  7879
              L LFTI
Sbjct  13478  LVLFTI  13483


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  13638  TLNFTI  13643


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8904   GCQTSTLTLLSP  8869
              GC    LTLL P
Sbjct  13841  GCR---LTLLRP  13849


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2084   TLNFPI  2101
              TLNF I
Sbjct  13927  TLNFTI  13932


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7787   FNITNW  7804
              F I NW
Sbjct  14206  FHIVNW  14211


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7152  ATMSPRSS  7175
             AT+SP  S
Sbjct  37    ATLSPKTS  44


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5818  SPPPSPQV  5795
             SP  SPQV
Sbjct  102   SPSLSPQV  109


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  841  ITSGLKAFS-ST  809
            ITS +K F  ST
Sbjct  189  ITSPMKTFADST  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -2

Query  1905  ISSNTVSSAPVSNRAS  1858
             IS     SAP S  AS
Sbjct  278   IST----SAPLSSSAS  289


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1695  EPTAPPEES  1721
             E  AP EES
Sbjct  441   ETSAPGEES  449


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +1

Query  7408  WYS-AAAEQFAE  7440
             W S   A+QF E
Sbjct  519   WTSESTAQQFSE  530


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = -3

Query  5846  STSQGAWCPISTPISTS  5796
             STS      +  PI TS
Sbjct  551   STS------VAAPITTS  561


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 2/18 (11%)
 Frame = +2

Query  8939  SGVLQELLTSSLLQGTFR  8992
             S V  E  TSSL    FR
Sbjct  676   SSVIPE--TSSLQSSAFR  691


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4455  TGTAEI  4472
             TGT EI
Sbjct  754   TGTPEI  759


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6929  STQLFNS  6949
             ST+LF S
Sbjct  856   STHLFTS  862


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6684  KESVS  6698
             KESVS
Sbjct  1075  KESVS  1079


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  486   LETSEG  503
             LE SEG
Sbjct  1229  LEASEG  1234


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1686  SRPEPTAPPE  1715
             S PE TAP E
Sbjct  1303  SSPEMTAPGE  1312


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  8265  TSITLSVPSAT  8233
             T ITL  P AT
Sbjct  1451  TTITL--PMAT  1459


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2164  MAIDRR  2181
             MA +RR
Sbjct  1664  MALERR  1669


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             ISL LS
Sbjct  1831  ISLTLS  1836


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2424  SSTVTDF  2404
             SST T+F
Sbjct  2084  SSTTTEF  2090


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3539  LLVTQSSD  3516
             L VT+ SD
Sbjct  2597  LVVTETSD  2604


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3317  LANTLSTMF  3291
             LA  L T+F
Sbjct  3009  LASKLTTLF  3017


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7008  VSLPS  6994
             VSLPS
Sbjct  3462  VSLPS  3466


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5277  STPAQVS  5257
             S PA+VS
Sbjct  3520  SSPAEVS  3526


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5984  HACVPTDPN  6010
             HA   TDPN
Sbjct  3714  HASTKTDPN  3722


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -2

Query  3597  YCESVTMFTSNPE  3559
             Y E  T+F   PE
Sbjct  4131  YSEKTTLFSKGPE  4143


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1574  TALFPRGP  1551
             T LF  GP
Sbjct  4135  TTLFSKGP  4142


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  5386  LAPFLALLCRVTPI  5345
             L PFL     VT I
Sbjct  4456  LTPFL-----VTTI  4464


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1359  TLEEM  1373
             TL+EM
Sbjct  4608  TLQEM  4612


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1050  TTSTL  1064
             TTSTL
Sbjct  5455  TTSTL  5459


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2755  TSERTS  2772
             TSE TS
Sbjct  5494  TSEKTS  5499


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  4443  FGFITGTAE  4469
             F F+TG  E
Sbjct  5850  FPFVTGSTE  5858


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2891  NSISPLT  2871
             +S SPLT
Sbjct  6069  DSTSPLT  6075


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3588  THNMH  3602
             TH MH
Sbjct  6292  THTMH  6296


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3541  LSSFAG  3558
             LS FAG
Sbjct  6431  LSTFAG  6436


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4025  IEAEVIP  4045
             I  EVIP
Sbjct  6713  ISTEVIP  6719


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  477   PGLLETS  497
             PGL ETS
Sbjct  6951  PGLRETS  6957


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = +2

Query  4031  AEV-IPAETG------QET  4066
             AE  IP +TG      Q+T
Sbjct  7026  AEMTIPTQTGPSGSTSQDT  7044


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SPP SP
Sbjct  7685  SPPSSP  7690


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +2

Query  9080  VLGLSG*TRSEPGSS  9124
             +LG    T  EPG S
Sbjct  7731  ILG----TSTEPGTS  7741


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5024  ILGTS  5038
             ILGTS
Sbjct  7731  ILGTS  7735


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8895  TSTLTL  8878
             TS LTL
Sbjct  8116  TSSLTL  8121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6922  VEKFPS  6905
             VE FPS
Sbjct  8286  VEDFPS  8291


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  1048  PAMSLPLGSLIWPG  1007
             P  SLP  SL  PG
Sbjct  8290  PSASLPVTSLLNPG  8303


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7105  TSNLS  7091
             TSNLS
Sbjct  8322  TSNLS  8326


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  431   TYSMG  445
             TY MG
Sbjct  8385  TYTMG  8389


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5131  ATEGAT  5148
             ATEG T
Sbjct  8430  ATEGST  8435


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8701  TSLISRT  8721
             T L SRT
Sbjct  8537  TTLMSRT  8543


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2903  SDLPNSIS  2880
             S LP SIS
Sbjct  8577  STLPESIS  8584


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1050  TTSTL  1064
             TTSTL
Sbjct  8678  TTSTL  8682


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  236   VER-AP---LVSLS  207
             VE   P   LVSLS
Sbjct  8847  VEKTSPPSSLVSLS  8860


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9032  PSPAQAT  9012
             PSP Q T
Sbjct  9046  PSPDQST  9052


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6436  TSRGT  6422
             TSRGT
Sbjct  9089  TSRGT  9093


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8701  TSLISRT  8721
             T L SRT
Sbjct  9120  TALMSRT  9126


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7192  ISSSR  7178
             ISSSR
Sbjct  9326  ISSSR  9330


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4819  SLSPV  4805
             SLSPV
Sbjct  9738  SLSPV  9742


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1957  KTSNSP  1940
             KTS SP
Sbjct  9779  KTSSSP  9784


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 0/16 (0%)
 Frame = -2

Query  5448   IGTSSFRLTSWMLPGL  5401
              I  SSF  TS + PG+
Sbjct  10043  IPSSSFSVTSLLTPGM  10058


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1786   YSSLSI  1769
              YSS SI
Sbjct  10117  YSSVSI  10122


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 7/16 (43%)
 Frame = -3

Query  5822   PISTP-------ISTS  5796
              P+ TP       ISTS
Sbjct  10132  PVGTPSSMAETSISTS  10147


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6042   SVTFTNTTS  6016
              SVT TNT S
Sbjct  10180  SVTPTNTPS  10188


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6596   NFTDNAKT  6619
              +FT  AKT
Sbjct  10202  DFTSSAKT  10209


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +3

Query  1422   LAEAMSQVTNSAT  1460
              L EAM   T  AT
Sbjct  10282  LSEAM---TSFAT  10291


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6573   SSARLPFNSS  6544
              SS   PF SS
Sbjct  10326  SSTPVPFSSS  10335


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  3891   LATISFATTGGRL  3853
              L T S  TT GRL
Sbjct  10365  LGTES-STTEGRL  10376


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7282   SGAER  7296
              SGAER
Sbjct  10575  SGAER  10579


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  565    DLSSSDP  545
              D SSS+P
Sbjct  10587  DVSSSEP  10593


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6888   VTISG  6874
              VTISG
Sbjct  10656  VTISG  10660


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7213   TSPIVP  7196
              TSP VP
Sbjct  10831  TSPTVP  10836


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  2486   TIPSINNETPGI  2521
              T+P +  E PG+
Sbjct  11030  TVPTVSPEVPGV  11041


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2748   SGVVSP  2731
              SGVV P
Sbjct  11095  SGVVTP  11100


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +2

Query  8903   PPSISSRGPRAASGV  8947
              P  I S GP A S V
Sbjct  11519  PVAITSPGPEASSAV  11533


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8743   LTPGPG  8726
              LTP PG
Sbjct  11649  LTPSPG  11654


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 15/32 (46%)
 Frame = +3

Query  1725   RSGVETTT--PPQKQEPIDKELYPLTSLRSLF  1814
              R G ET T  P Q            TS  SLF
Sbjct  11805  RPGAETSTALPTQT-----------TS--SLF  11823


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8895   TSTLTL  8878
              TSTL L
Sbjct  11864  TSTLSL  11869


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
 Frame = -3

Query  9041   SPLPSPAQATPPWKVP  8994
              S  PS   AT P  VP
Sbjct  12060  SSIPSSTAATVPFMVP  12075


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5287   KNSATTAV  5310
              K+S  TAV
Sbjct  12135  KDSSATAV  12142


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8192   KNSAVSLL  8215
              KN  V LL
Sbjct  12585  KNTSVGLL  12592


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  12632  LYWE----LSQL  12639


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  12787  LYWE----LSQL  12794


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8192   KNSAVSLL  8215
              KN  V LL
Sbjct  12896  KNTSVGLL  12903


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8817   LYWPL  8803
              LYW L
Sbjct  13099  LYWQL  13103


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041   SPLPSP  9024
              SP PSP
Sbjct  13154  SPVPSP  13159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  1725   RSGVETT-TP  1751
              RS V TT TP
Sbjct  13755  RSSVSTTSTP  13764


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  388    FSHRSNSP  365
              F HRS  P
Sbjct  13907  FTHRSSVP  13914


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  8817   LYWPLLSYLAQL  8782
              LYW     L QL
Sbjct  14162  LYWE----LSQL  14169


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4248   NSLFID  4231
              +SLFI+
Sbjct  14184  DSLFIN  14189


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5366  PLSSNA  5349
             PLSS A
Sbjct  283   PLSSSA  288


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5764  SGNESEG  5784
             SG E EG
Sbjct  425   SGKETEG  431


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  2028  TNTVPIALCPQIS  1990
             TN VP+   P +S
Sbjct  644   TNGVPVSVSPAVS  656


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  8274  PCTTSITLSVPS  8239
             P TTS T   PS
Sbjct  1196  PSTTSLT---PS  1204


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4817  RLAFGSGS  4840
             R+A+ SGS
Sbjct  1296  RMAYSSGS  1303


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3601  IRNHSSTT  3624
             IRN  STT
Sbjct  1509  IRNTDSTT  1516


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = -2

Query  8862  PSHAGSQGVTSWCSL  8818
             PS   S  VT W SL
Sbjct  1819  PSPTPSMEVTPWISL  1833


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  2183  ISLPTS  2188


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5457  TIAIGTSSF  5431
             T AI  SSF
Sbjct  2945  TKAISASSF  2953


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +3

Query  507   RQ--ILGQLQPS  536
             RQ  IL +LQ S
Sbjct  3063  RQPNILVHLQTS  3074


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9008  PWKVP  8994
             PWK P
Sbjct  3228  PWKTP  3232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2737  KSPPQQML  2714
             KSP + ML
Sbjct  3271  KSPTENML  3278


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 8/24 (33%)
 Frame = +1

Query  8122  SGTQGVGSPQILV-------ESPT  8172
             SGT G G  Q L        ESPT
Sbjct  3298  SGTPG-GTRQSLATMSSVSLESPT  3320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5327  WVST  5338
             WVST
Sbjct  3393  WVST  3396


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4248  NSLFIDST  4225
             N L+I ST
Sbjct  3448  NTLYITST  3455


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6305  LDIIP  6319
             LD+IP
Sbjct  3836  LDVIP  3840


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +1

Query  1786  IL*LPS-GHSLATTP  1827
             IL L S GHS   TP
Sbjct  4174  IL-LTSQGHSPSSTP  4187


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  876   PQDLN  890
             PQ+LN
Sbjct  4508  PQNLN  4512


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4348  NPPF  4337
             NPPF
Sbjct  4735  NPPF  4738


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8960  LTSSL  8974
             LTSSL
Sbjct  4779  LTSSL  4783


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1023  LSSGLV  1006
             L SGLV
Sbjct  5072  LTSGLV  5077


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3850  ITSHCS  3833
             ITSH S
Sbjct  5936  ITSHSS  5941


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  120   TTDGHTL  100
             TTD HT+
Sbjct  6289  TTDTHTM  6295


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  671   EKSTASSS  694
             EK   SSS
Sbjct  6506  EKTSSSSS  6513


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 2/17 (11%)
 Frame = -2

Query  2238  EIFPSFSISVQI--STN  2194
             E+ PS  IS  I  S N
Sbjct  6716  EVIPSLPISLGITESSN  6732


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  4056  PVSAGITSAS  4027
             P+S GIT  S
Sbjct  6722  PISLGITESS  6731


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5846  STSQG  5832
             STSQG
Sbjct  6745  STSQG  6749


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -3

Query  1580  FP----TALFPRGP  1551
             FP    T L  RGP
Sbjct  7066  FPHSEMTTLMSRGP  7079


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +3

Query  1740  TTTPPQKQEPI  1772
             TT PP    PI
Sbjct  7105  TTSPP----PI  7111


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8698  ATSLISRT  8721
             AT  ISRT
Sbjct  7274  ATTEISRT  7281


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 1/18 (5%)
 Frame = -2

Query  1908  LISSNTVSSA-PVSNRAS  1858
             +IS   VSS  P S   S
Sbjct  7401  MISPSPVSSTLPASSHSS  7418


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1887  SSAPVSN  1867
             SS PV N
Sbjct  8019  SSEPVTN  8025


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4222  SLTLG  4208
             SLTLG
Sbjct  8118  SLTLG  8122


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = +1

Query  154   FSQCGKSLAVAPE  192
             F Q    L V PE
Sbjct  8169  FAQ----LTVSPE  8177


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  691   QLTQDTAI  714
             QL ++TA+
Sbjct  8933  QLSENTAV  8940


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6967  STIKPSTI  6944
             S  KPST+
Sbjct  9015  SATKPSTV  9022


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  814   STTF---TH  797
             STTF   TH
Sbjct  9099  STTFMSGTH  9107


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1031  PWFSH  1017
             PW SH
Sbjct  9131  PWLSH  9135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1887  SSAPVS  1870
             SS PVS
Sbjct  9155  SSSPVS  9160


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1023  LSSGLV  1006
             L SGLV
Sbjct  9178  LTSGLV  9183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2545  TGMERIT  2565
             T ME IT
Sbjct  9345  TSMETIT  9351


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2477  TAFTIPS  2497
             T  TIPS
Sbjct  9836  TTITIPS  9842


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  671    EKSTASSS  694
              EK   SSS
Sbjct  10016  EKTSSSSS  10023


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2039   PVNII  2053
              PV+II
Sbjct  10224  PVDII  10228


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1067   GTNRMD  1084
              GT RM+
Sbjct  10468  GTKRME  10473


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2486   TIPSINNETP  2515
              TIP +   TP
Sbjct  10606  TIPTVSKTTP  10615


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = -2

Query  4410   SLVCMSVAIMSTILSPAL  4357
              SLV  S A+ ST L P L
Sbjct  10990  SLVASSRAVTSTTL-PTL  11006


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4161   AALTVAP  4141
              A LTV P
Sbjct  11140  AVLTVSP  11146


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2359   PEVLSSLI  2336
              P VL SL+
Sbjct  11316  PGVLTSLV  11323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +3

Query  8544   FP---VTPQVP  8567
              FP   V P VP
Sbjct  11391  FPTITVSPDVP  11401


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1642   RSGLPT  1659
              RSG PT
Sbjct  11615  RSGVPT  11620


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  2040   GVGPTNTVP  2014
              GV PT T+P
Sbjct  11617  GV-PTTTIP  11624


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = +2

Query  6842   TIIFKQSSGGDPEIVT  6889
              TI     S G PE VT
Sbjct  11734  TI-----SPGAPEMVT  11744


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 12/25 (48%)
 Frame = -2

Query  6837   LFPNCSLNLL------------AIC  6799
              L+  C L LL            AIC
Sbjct  12278  LYSGCRLTLLRPEKDGAATGVDAIC  12302


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4927   VFQTLL  4944
              V QTLL
Sbjct  12575  VLQTLL  12580


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 12/25 (48%)
 Frame = -2

Query  6837   LFPNCSLNLL------------AIC  6799
              L+  C L LL            AIC
Sbjct  12747  LYSGCRLTLLRSEKDGAATGVDAIC  12771


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2539   ASTGMERI  2562
              A TGM+ I
Sbjct  12919  AATGMDAI  12926


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7562   NPKSPG  7545
              NP SPG
Sbjct  13088  NPQSPG  13093


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 12/25 (48%)
 Frame = -2

Query  6837   LFPNCSLNLL------------AIC  6799
              L+  C L LL            AIC
Sbjct  13215  LYSGCRLTLLRPEKDGVATRVDAIC  13239


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  1725   RSGVETT-TP  1751
              RS V TT TP
Sbjct  13287  RSSVPTTSTP  13296


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 12/25 (48%)
 Frame = -2

Query  6837   LFPNCSLNLL------------AIC  6799
              L+  C L LL            AIC
Sbjct  13527  LYSGCRLTLLRPKKDGAATKVDAIC  13551


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 12/25 (48%)
 Frame = -2

Query  6837   LFPNCSLNLL------------AIC  6799
              L+  C L LL            AIC
Sbjct  13683  LYSGCRLTLLRPEKDGTATGVDAIC  13707


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 12/25 (48%)
 Frame = -2

Query  6837   LFPNCSLNLL------------AIC  6799
              L+  C L LL            AIC
Sbjct  13838  LYSGCRLTLLRPEKDGEATGVDAIC  13862


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6352   CQLI  6341
              CQLI
Sbjct  14126  CQLI  14129


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5004   YVLLDIH  4984
              Y L DIH
Sbjct  14297  YQLVDIH  14303


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  728    LPYSAE--HPG  754
              LPYS +  +PG
Sbjct  14332  LPYSQDKAQPG  14342


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +3

Query  714  QV----SQNYP  734
            QV    S NYP
Sbjct  108  QVNGTPSRNYP  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8910  LGGCQTSTLT  8881
             LGG  TS LT
Sbjct  396   LGGTSTSALT  405


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  2084  TLNFPISPIET  2116
             TLN    P ET
Sbjct  432   TLNTSMTPLET  442


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8256  TLSVPS  8239
             TLS PS
Sbjct  837   TLSLPS  842


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5293  SATTAV  5310
             SATT V
Sbjct  980   SATTTV  985


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2086  SATNLS  2069
             SAT LS
Sbjct  988   SATSLS  993


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1452  SATIM  1466
             SAT+M
Sbjct  993   SATVM  997


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8121  SSTILVT  8101
             S TIL T
Sbjct  1018  STTILTT  1024


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3237  TMLSVV  3220
             TM SVV
Sbjct  1268  TMASVV  1273


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2241  FEIFP  2227
             F IFP
Sbjct  1486  FAIFP  1490


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  6557  HLTAV--EL  6537
             HLT V  EL
Sbjct  1585  HLTEVYPEL  1593


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6317  PIDNDTT  6337
             P DN TT
Sbjct  1630  PMDNTTT  1636


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  370   SPPLNT  353
             SP LNT
Sbjct  1720  SPRLNT  1725


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1733  PRPE  1722
             PRPE
Sbjct  1910  PRPE  1913


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1039  SLPLGS  1022
             S PLGS
Sbjct  2204  SIPLGS  2209


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6386  PKVSFEPIP  6412
             P VSF P P
Sbjct  2248  PTVSFSPSP  2256


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6323  DNDTT  6337
             DN+TT
Sbjct  2344  DNETT  2348


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  460   SSSLLA  443
             SS LLA
Sbjct  2462  SSALLA  2467


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  2448  TEKYASPTSSTVTDF  2404
             TE    PTSS  T F
Sbjct  2655  TE----PTSSLATSF  2665


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5290  NSATTA  5307
             NS TTA
Sbjct  2767  NSETTA  2772


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = -2

Query  4050  SAGITSASIYPLAT  4009
             SAG   AS+ PL T
Sbjct  2777  SAGLERASVMPLTT  2790


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  4548  FMSLLSCITTAP  4513
             F SL    TTAP
Sbjct  2873  FASL----TTAP  2880


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5539  AVSASS  5522
             A+SASS
Sbjct  2947  AISASS  2952


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7673  FLCPTPS  7653
             FL PT S
Sbjct  3042  FLSPTAS  3048


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6175  LQISAL  6158
             LQ SAL
Sbjct  3071  LQTSAL  3076


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  867   GATPQDLNTM  896
             G T Q L TM
Sbjct  3302  GGTRQSLATM  3311


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5819  ISTPIST  5799
             IST I T
Sbjct  3538  ISTTITT  3544


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  371   IRSMGKNSV  397
             I  MG NS+
Sbjct  3542  ITTMGTNSI  3550


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5339  MSTP  5328
             MSTP
Sbjct  3628  MSTP  3631


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  256   FSKPSPAS  233
             FS P P S
Sbjct  3800  FSRPDPTS  3807


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 15/31 (48%)
 Frame = +1

Query  3031  TSTWSVL*PIKR-LNSRNTEAGARPMDISNL  3120
             TS  SVL    R LN          +DI NL
Sbjct  3898  TSSSSVL----RTLNT---------LDI-NL  3914


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2552  WKGSP  2566
             WK SP
Sbjct  3924  WKSSP  3928


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1813  LATTPR  1830
             LATT R
Sbjct  4123  LATTQR  4128


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 10/32 (31%)
 Frame = -2

Query  8298  MWRIALQAPCTTSITLSVP---SATAMAVALS  8212
             M RI L+ P T     S P   S TA   ALS
Sbjct  4206  MSRISLE-PGT-----SLPPNLSSTA-GEALS  4230


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6918  STVIQH  6935
             STVI H
Sbjct  4325  STVITH  4330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 9/26 (34%)
 Frame = +3

Query  1701  TAPP---EESFRSG-----VETTTPP  1754
             T PP   E S+ S      V TT PP
Sbjct  4442  TSPPSVAETSYPSSLTPFLV-TTIPP  4466


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  290   VSTPKILTSG  319
             VS   +LTSG
Sbjct  4480  VSATSVLTSG  4489


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +2

Query  4379  DIIAT-----DIQT  4405
             +I AT     DI+T
Sbjct  4517  EILATLAATTDIET  4530


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7008  VSLPSVL  6988
             VS+ SVL
Sbjct  4773  VSMSSVL  4779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1026  VLSSGLV  1006
             VL S LV
Sbjct  4778  VLTSSLV  4784


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  6147  QSGVN--FTHGF  6118
             Q G+    THGF
Sbjct  4999  QAGIHSAMTHGF  5010


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5755  AEDSGNES  5778
             A +SG ES
Sbjct  5130  ANNSGHES  5137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5215  LAPWLRAT  5238
             L P LR T
Sbjct  5188  LTPRLRET  5195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -2

Query  6885  TIS--GSPPE  6862
             TI    SPPE
Sbjct  5268  TITTQASPPE  5277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3569  EVNIVTD  3589
             E+N VT+
Sbjct  5792  EINTVTE  5798


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7217  IHFS  7206
             IHFS
Sbjct  6005  IHFS  6008


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2787  VMNS  2798
             VMNS
Sbjct  6086  VMNS  6089


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  691   QLTQDT  708
             QLT DT
Sbjct  6169  QLTLDT  6174


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3136  KSENRKI  3156
             KSE R I
Sbjct  6439  KSEERTI  6445


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  460   SSSLL  446
             SSSLL
Sbjct  6511  SSSLL  6515


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  1161  MYSPTSI  1181
             MY  T I
Sbjct  6586  MYPSTNI  6592


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  168   STLTKR  151
             STLT R
Sbjct  7060  STLTQR  7065


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  124   TLVTRDPSD  150
             TL  R P D
Sbjct  7073  TLMSRGPGD  7081


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -2

Query  4542  SLLSCI--TTAPSP  4507
             SLLS    TT P P
Sbjct  7098  SLLS-LPATTSPPP  7110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5135  QREPHNE  5155
             QR PH E
Sbjct  7360  QRLPHSE  7366


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4471  STLERT  4488
             STLE T
Sbjct  7630  STLEST  7635


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1298  QGFCHP  1281
             QGF HP
Sbjct  7655  QGFPHP  7660


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6044  FLSHLP  6027
             FL H P
Sbjct  7706  FLAHIP  7711


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  16    TRSEPGSS  39
             T  EPG S
Sbjct  7734  TSTEPGTS  7741


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SST SL
Sbjct  7925  SSTTSL  7930


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  206   LSG-PCSGATA  177
             LSG P  GATA
Sbjct  8142  LSGVP-TGATA  8151


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7002  VTQSPSHAE  7028
             VTQ  SH E
Sbjct  8232  VTQRFSHSE  8240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  967   SAASSLM  947
             S ASSL+
Sbjct  8264  SSASSLL  8270


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SSTS L
Sbjct  8320  SSTSNL  8325


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  973   SHSAASSLM  947
             SHS    LM
Sbjct  8532  SHSEMTTLM  8540


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = -3

Query  236   VERAPLVSLSLSGP  195
             VE A  VS SLS P
Sbjct  8555  VEEASSVSSSLSSP  8568


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3529  VTSNLSS  3549
             V S LSS
Sbjct  8561  VSSSLSS  8567


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4155  LTVAPVK  4135
             LT  PVK
Sbjct  8594  LTLGPVK  8600


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  728   ILADLI  711
             +LADL+
Sbjct  8663  VLADLV  8668


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7878  ESTAKTI  7858
             EST  TI
Sbjct  9073  ESTEMTI  9079


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2433  SPTSSTVTD  2407
             SP SST  D
Sbjct  9157  SPVSSTLPD  9165


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5027  LGTSS  5041
             LGTSS
Sbjct  9189  LGTSS  9193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  1517  IETLNNLSLVP  1485
             I+T   LSL P
Sbjct  9278  IQTKSKLSLTP  9288


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2305  MEKISR  2322
             ME I R
Sbjct  9347  METITR  9352


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  4056  PVSAGITSASI  4024
             PV   +TS SI
Sbjct  9548  PV---VTSSSI  9555


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  460    SSSLL  446
              SSSLL
Sbjct  10021  SSSLL  10025


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4095   LPANF  4081
              +PANF
Sbjct  10148  MPANF  10152


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5482   LGNESNT  5462
              LG ES T
Sbjct  10365  LGTESST  10371


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  1167   SPTSILDIR  1193
              SP  ILD R
Sbjct  10394  SP--ILDTR  10400


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  354    VLSGGELD  377
              +LS GEL+
Sbjct  11061  ILSPGELE  11068


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1029   RGSDIA  1046
              RGSD A
Sbjct  11598  RGSDTA  11603


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6582   TTSSSA  6565
              TT SSA
Sbjct  11658  TTASSA  11663


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  2069   TQIGCTLNFPISPIETVP  2122
              TQ G    F + PI TVP
Sbjct  11668  TQTG----FTV-PIRTVP  11680


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  214    ETRGALSTQ  240
              ET  AL TQ
Sbjct  11809  ETSTALPTQ  11817


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  2142   IPGFNFTGTVSIGLM  2098
              IP    T T S GL+
Sbjct  11862  IP----TSTLSLGLL  11872


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 12/44 (27%), Positives = 12/44 (27%), Gaps = 29/44 (65%)
 Frame = -2

Query  4155   LTVAPVKLLPLSVCIVFTGHLPANFKRKYAVSCPVSAGITSASI  4024
              LTV P                        AVS     G  SASI
Sbjct  11893  LTVSP------------------------AVS-----GLSSASI  11907


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  12082  ITNLQY  12087


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  614    DKRHQGS  634
              D RH GS
Sbjct  12090  DMRHPGS  12096


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5117   PEDQGPQRE  5143
              PED G  RE
Sbjct  12152  PEDLGLDRE  12160


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7546   PGDLGL  7563
              P DLGL
Sbjct  12152  PEDLGL  12157


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  12238  ITNLQY  12243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  12396  ITNLQY  12401


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827   GAPSPPPSP  5801
              G PS  PSP
Sbjct  12683  GTPSSLPSP  12691


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827   GAPSPPPSP  5801
              G PS  PSP
Sbjct  12839  GTPSSLPSP  12847


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  12863  ITNLQY  12868


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827   GAPSPPPSP  5801
              G PS  PSP
Sbjct  12995  GTPSSLPSP  13003


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  13019  ITNLQY  13024


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  614    DKRHQGS  634
              D RH GS
Sbjct  13027  DMRHPGS  13033


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7583   TTAVPW  7600
              TT  PW
Sbjct  13136  TTSTPW  13141


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  13175  ITNLQY  13180


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2097   GKFKVQP  2077
              G F VQP
Sbjct  13297  GTFTVQP  13303


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434   ITHIQY  2417
              IT  QY
Sbjct  13331  ITNLQY  13336


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3422   DGAANR  3439
              DGAA R
Sbjct  13385  DGAATR  13390


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +1

Query  8683   STTHKATSLISRT  8721
              ST H AT   SRT
Sbjct  13455  STMHLAT---SRT  13464


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  961    ASSLMVSFNI  932
              AS L+V F I
Sbjct  13474  ASPLLVLFTI  13483


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  4493   LLVLSKVDF  4467
              LLVL  ++F
Sbjct  13477  LLVLFTINF  13485


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  388    FSHRS  374
              F HRS
Sbjct  13752  FTHRS  13756


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8280   VELFATYLE  8306
              V+L  TYL+
Sbjct  13992  VDLLCTYLQ  14000


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1278   FLPP  1267
              FLPP
Sbjct  14059  FLPP  14062


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5291   ILQQLL  5308
              +LQ+LL
Sbjct  14105  VLQHLL  14110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  908  GGTSSS  925
            GGTS S
Sbjct  397  GGTSTS  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7643  HTTWME  7660
             HT W E
Sbjct  533   HTQWVE  538


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1369  SSSVAA  1352
             S SVAA
Sbjct  551   STSVAA  556


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6010  PTRSSIGK  6033
             PT   IGK
Sbjct  1207  PTSGAIGK  1214


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4522  YCPFTFP  4502
             Y P TFP
Sbjct  1278  YTPLTFP  1284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  6768  LV----EQNGITL  6794
             LV    EQ  ITL
Sbjct  1443  LVLAPSEQTTITL  1455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6176  NDTNTNSSS  6202
             ++T T SSS
Sbjct  1632  DNTTTGSSS  1640


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  671   EKSTASSS  694
             EKS  SSS
Sbjct  1900  EKSEVSSS  1907


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/11 (36%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  1375  IISSSVAAGPN  1343
             +IS  +  GP+
Sbjct  1946  VISTGITSGPD  1956


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6973  TPSTIKPSTI  6944
             T S I P TI
Sbjct  1963  THSPITPPTI  1972


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3766  ESTIFRWN  3789
             +STI R N
Sbjct  2039  DSTISRRN  2046


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2729  WGLTT  2743
             W LTT
Sbjct  2053  WDLTT  2057


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4056  PVSAGITS  4033
             PV A I S
Sbjct  2135  PVGASISS  2142


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9106  SGLTRE  9089
             SGLT E
Sbjct  2157  SGLTSE  2162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  21    SGLTRE  4
             SGLT E
Sbjct  2157  SGLTSE  2162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7005  SLPSVLFDPS  6976
             S P V F PS
Sbjct  2246  SIPTVSFSPS  2255


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8875  LSGSSIP  8855
             LSG S P
Sbjct  2635  LSGASFP  2641


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  5490  ETNLAMKAT  5464
             ET L M  T
Sbjct  2683  ETTLTMSET  2691


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 6/23 (26%)
 Frame = -2

Query  8895  TST-----LT-LLSPGHPSHAGS  8845
             TST     LT L S G+    GS
Sbjct  3005  TSTSLASKLTTLFSTGQAARSGS  3027


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1614  TERQANFL  1637
             TE +  FL
Sbjct  3036  TEKETSFL  3043


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7079  PPISGQIR  7102
             P IS +IR
Sbjct  3214  PSISPEIR  3221


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4152  TVAPVKL  4132
             TV PV L
Sbjct  3241  TVEPVTL  3247


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3813  RNITVIGEQ  3839
             R IT  G+Q
Sbjct  3322  RSITGTGQQ  3330


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1902  SSNTVSS  1882
             S N VSS
Sbjct  3375  SPNSVSS  3381


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1465  IMVAE  1451
             IM AE
Sbjct  3408  IMAAE  3412


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8008  SISERIL  8028
             S SER L
Sbjct  3657  STSERTL  3663


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +1

Query  8119  TSGTQGVGSPQIL  8157
             TS  QG   PQ L
Sbjct  3751  TSAPQGATTPQEL  3763


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4623  LATQSSP  4603
             LA Q SP
Sbjct  4093  LAMQTSP  4099


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SS SSL
Sbjct  4157  SSSSSL  4162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  3591  ESVTMFTSNPES  3556
             E VT   S P+S
Sbjct  4795  ETVT---SSPQS  4803


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4391  TDIQT  4405
             TDI+T
Sbjct  4819  TDIET  4823


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8884  NTSLSGSSI  8858
             NT LS S I
Sbjct  4957  NTRLSTSPI  4965


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9093  ERPST  9079
             ERP T
Sbjct  5401  ERPAT  5405


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 14/27 (51%)
 Frame = -2

Query  8964  VSSS*STPD------------AALGPR  8920
             VS S  TP+            A L PR
Sbjct  5464  VSTS--TPNISQTNQIQTEPTASLSPR  5488


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3338  PTQE  3327
             PTQE
Sbjct  5693  PTQE  5696


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3218  ITTESI  3235
             I TE I
Sbjct  5839  ISTETI  5844


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3961  TRLYTF  3978
             TRL TF
Sbjct  5845  TRLSTF  5850


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  6541  ST-AVKWQS  6564
             ST  V WQS
Sbjct  5909  STKGVSWQS  5917


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4457  RDSRNPL  4477
             RDS  PL
Sbjct  6068  RDSTSPL  6074


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3347  NTPPL  3361
             N PPL
Sbjct  6143  NSPPL  6147


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  907   TVFSMVF  887
             T FS++F
Sbjct  6360  TTFSLIF  6366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6129  THGF  6118
             THGF
Sbjct  6478  THGF  6481


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SS SSL
Sbjct  6509  SSSSSL  6514


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9033  PQSRP  9019
             P+SRP
Sbjct  6531  PESRP  6535


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6527  PVVSTQ  6544
             P+VST+
Sbjct  6668  PIVSTE  6673


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4575  SLGIME  4592
             SLGI E
Sbjct  6724  SLGITE  6729


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = -2

Query  7878  ESTAKTILKPTKPP  7837
             ES   TI   T PP
Sbjct  6729  ESSNMTIITRTGPP  6742


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8971  LATRDFP  8991
             +AT +FP
Sbjct  6767  MATQEFP  6773


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7900  LPNSIH  7883
             LP  IH
Sbjct  6820  LPKTIH  6825


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6308  DIIPIDNDTT  6337
             +I   D DTT
Sbjct  6866  EILTTDEDTT  6875


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1378  VIISSS  1361
             V ISSS
Sbjct  7117  VTISSS  7122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1737  ETTTPP  1754
             ET  PP
Sbjct  7444  ETSSPP  7449


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6784  PFCSTNVT  6761
             PF  T VT
Sbjct  7473  PFSNTAVT  7480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6205  PATTIGI  6185
             PATT  I
Sbjct  7725  PATTTDI  7731


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SS SSL
Sbjct  7741  SSSSSL  7746


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -2

Query  1905  ISSNTV---SSAPV  1873
             IS  TV   S  PV
Sbjct  7883  ISTRTVSWFSTSPV  7896


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6579  TSSSAR  6562
             TSSS R
Sbjct  8421  TSSSER  8426


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3218  ITTESI  3235
             I TE I
Sbjct  8473  ISTEAI  8478


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1737  ETTTPP  1754
             ET  PP
Sbjct  8612  ETSSPP  8617


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1365  EEMMT  1379
             E MMT
Sbjct  8696  ETMMT  8700


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3688  LSGMGT  3705
             LSGM T
Sbjct  8729  LSGMPT  8734


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7183  SRSEDLGL  7160
             SR E L L
Sbjct  8741  SRTEALSL  8748


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3218  ITTESI  3235
             I TE I
Sbjct  8765  ISTETI  8770


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  970   HSAASS  953
             HS ASS
Sbjct  8793  HSGASS  8798


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -3

Query  4841  DSLTQ-M  4824
             DS+TQ M
Sbjct  9034  DSMTQVM  9040


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  3212  QKITTESIVI  3241
             Q I TE  VI
Sbjct  9055  QDISTE--VI  9062


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1737  ETTTPP  1754
             ET  PP
Sbjct  9196  ETSSPP  9201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  295   THQSP  281
             TH+SP
Sbjct  9234  THESP  9238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3844  SHCSPITV  3821
             SH SP+ V
Sbjct  9456  SHSSPVPV  9463


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4996  QDIT  5007
             QDIT
Sbjct  9592  QDIT  9595


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  580   TVLY  569
             TVLY
Sbjct  9602  TVLY  9605


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 8/32 (25%)
 Frame = +2

Query  6572  EEVVIR---SVNFTDNAK-TIIVQ----LNTS  6643
             +EVV R   S   T+ A  TI  Q    L TS
Sbjct  9642  DEVVTRLSTSPIMTESAEITITTQTGYSLATS  9673


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4504  PEELCWSFP  4478
             PE L W  P
Sbjct  9710  PESLSWTSP  9718


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5293  SATTAV  5310
             SATT V
Sbjct  9904  SATTEV  9909


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  124    TLVTRDPSDP  153
              TL  R P +P
Sbjct  9998   TLMSRSPENP  10007


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287   SSTSSL  8270
              SS SSL
Sbjct  10019  SSSSSL  10024


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5299   TTAVY  5313
              TT VY
Sbjct  10495  TTSVY  10499


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8550   VTPQVP  8567
              V P+VP
Sbjct  11034  VSPEVP  11039


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6594   TDLITTSS  6571
              T L+T SS
Sbjct  11043  TSLVTSSS  11050


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4050   SAGITSASI  4024
              S G+ S SI
Sbjct  11049  SSGVNSTSI  11057


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8939   SGVLQELLTSS  8971
              SGV   L TSS
Sbjct  11095  SGVVTPLVTSS  11105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8550   VTPQVP  8567
              V P+VP
Sbjct  11144  VSPEVP  11149


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1583   TFPT  1572
              TFPT
Sbjct  11333  TFPT  11336


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1029   LVLSSG  1012
              LV SSG
Sbjct  11463  LVISSG  11468


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6551   TAVELI  6534
              TA++LI
Sbjct  11488  TAIQLI  11493


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3251   TPKF  3262
              TPKF
Sbjct  11506  TPKF  11509


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3349   YPSLSE  3366
              +P LSE
Sbjct  11561  FPTLSE  11566


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5413   HPGSQ  5427
              HPG Q
Sbjct  11665  HPGTQ  11669


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2477   TAFTIP  2494
              T FT+P
Sbjct  11670  TGFTVP  11675


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  1437   SQVTNS--AT  1460
              SQ+T S  AT
Sbjct  11745  SQITSSGAAT  11754


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2925   LTLIP  2911
              +TLIP
Sbjct  11943  MTLIP  11947


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2505   MRHQG  2519
              MRH G
Sbjct  12091  MRHPG  12095


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2505   MRHQG  2519
              MRH G
Sbjct  13028  MRHPG  13032


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  406    PGLNR  392
              PGL+R
Sbjct  13404  PGLDR  13408


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  406    PGLNR  392
              PGL+R
Sbjct  13560  PGLDR  13564


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/17 (35%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = -2

Query  4248   NSLFID--------STT  4222
              +SLF++        STT
Sbjct  13745  DSLFVNGFTHRSSVSTT  13761


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3092   PASVF  3078
              PAS+F
Sbjct  13777  PASIF  13781


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 7/19 (36%)
 Frame = -3

Query  3374   TIISLREGY*QTPTQESRW  3318
              TI  LR  Y     +E  W
Sbjct  13798  TITNLR--Y-----EENMW  13809


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7457   QHLL  7468
              QHLL
Sbjct  14107  QHLL  14110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  289    GEYAKNF  309
              GEY  NF
Sbjct  14200  GEYQINF  14206


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  2729   WGLTTPD  2749
              W L  PD
Sbjct  14211  WNLSNPD  14217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4465   QKSTLERTS  4491
              Q  TL+R S
Sbjct  14422  QNFTLDRSS  14430


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2644   VLIDNY  2627
              VL+D Y
Sbjct  14431  VLVDGY  14436


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2738  TTPDK  2752
             T PDK
Sbjct  58    TSPDK  62


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  4201  LQSPKSRSS  4227
             L SP  R S
Sbjct  126   LSSPRTRTS  134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1400  SSYSLT  1383
             S Y LT
Sbjct  145   STYTLT  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  856  AENMGITS  833
            AE M I S
Sbjct  371  AETMDIPS  378


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1284  MTETL  1298
             MT TL
Sbjct  451   MTATL  455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  1379  SMSGSRRTR  1405
             SM G   TR
Sbjct  610   SMTGGSSTR  618


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2368  IRNTTS  2385
             +RN TS
Sbjct  785   VRNATS  790


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1525  LPQLKHLT  1502
             LP   HLT
Sbjct  936   LPKISHLT  943


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5847  INIPR  5833
             I IPR
Sbjct  1118  ITIPR  1122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5812  PPSP  5801
             PPSP
Sbjct  1138  PPSP  1141


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3840  WLVIL  3854
             WL IL
Sbjct  1150  WLGIL  1154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6694  YPERT  6708
             YPE T
Sbjct  1242  YPEST  1246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7244  EPLGVAP  7264
             EPL  AP
Sbjct  1441  EPLVLAP  1447


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3171  PLILA  3157
             PL+LA
Sbjct  1442  PLVLA  1446


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2758  SERTSIPL  2781
             SE T I L
Sbjct  1448  SEQTTITL  1455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2022  TVPI  2011
             TVPI
Sbjct  1534  TVPI  1537


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  586   VATVLYNDLSSS  551
             V TV+  D S S
Sbjct  1773  VTTVMTSDISKS  1784


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  224   PLVSLSLS  201
             P +SL LS
Sbjct  1829  PWISLTLS  1836


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +1

Query  2161  TMAIDRRKNKSISR  2202
             T+A DR  N  + R
Sbjct  1858  TLATDRSLNTGVTR  1871


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 1/11 (9%)
 Frame = +1

Query  7402  IVWYSAAA-EQ  7431
             IVW S    EQ
Sbjct  1972  IVWTSTGTIEQ  1982


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2682  GSIEQ  2696
             G IEQ
Sbjct  1978  GTIEQ  1982


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6706  SSLDTD  6689
             S L+TD
Sbjct  2119  STLNTD  2124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4107  FTGHLPA  4087
             FT HL A
Sbjct  2542  FTPHLSA  2548


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  149   SEGSLVT  129
             SE SL T
Sbjct  2558  SEASLLT  2564


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  8119  TSGTQGVGS  8145
             T G QG  S
Sbjct  2789  TTGSQGMAS  2797


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6038  SHLP  6027
             SHLP
Sbjct  3260  SHLP  3263


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7152  ATMS  7163
             ATMS
Sbjct  3309  ATMS  3312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3629  QSESELV  3649
             QS  ELV
Sbjct  3330  QSSPELV  3336


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  8683  STTHKATSLIS  8715
             ST +  TSL+S
Sbjct  3454  STAQ-TTSLVS  3463


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  737   SAEHP  751
             S EHP
Sbjct  3576  STEHP  3580


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             T STM
Sbjct  3609  TISTM  3613


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4195  SKFLLDS  4175
             S FL DS
Sbjct  3726  STFLFDS  3732


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  2903  SDLPNSISPLTS  2868
             S LP SI   TS
Sbjct  3774  SQLPFSIGHITS  3785


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  914   TSSSHA  931
             TSS HA
Sbjct  3958  TSSEHA  3963


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  970   HSAASSL  950
             HSA S L
Sbjct  3971  HSASSKL  3977


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3431  ANRETK  3448
             A R+TK
Sbjct  4234  ASRDTK  4239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7148  NSNNESEI  7171
             NS  ES I
Sbjct  4613  NSTTESNI  4620


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  306   IFGVLTSR  283
             IF V  SR
Sbjct  4658  IFSVASSR  4665


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4486  TSKAPL  4503
             TSK PL
Sbjct  4689  TSKIPL  4694


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1634  KISLSLST  1611
             KI L L T
Sbjct  4691  KIPLALDT  4698


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3182  NDVK  3193
             NDVK
Sbjct  4726  NDVK  4729


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  1893  TVSSAP--VSN  1867
             TV S P   SN
Sbjct  4796  TVTSSPQSMSN  4806


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = -3

Query  8675  IKDIL--------SSL  8652
             I DIL        SSL
Sbjct  5079  ITDILRTRLEPVTSSL  5094


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  7909  TIIVSDPPP  7935
             T  V DP P
Sbjct  5157  TTTVGDPAP  5165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1586  STFPT  1572
             S FPT
Sbjct  5201  SSFPT  5205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5408  GSIQEVS  5428
             G I EVS
Sbjct  5217  GTITEVS  5223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7197  GTIGEV  7214
             GTI EV
Sbjct  5217  GTITEV  5222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4527  ITTAPSP  4507
             ITT  SP
Sbjct  5269  ITTQASP  5275


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9020  QATPP  9006
             QA PP
Sbjct  5272  QASPP  5276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2433  SPTSST  2416
             SP SST
Sbjct  5348  SPVSST  5353


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -3

Query  2747  LVW*VPTSTDV  2715
             LV    T TDV
Sbjct  5373  LV----TTTDV  5379


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8701  TSLISRT  8721
             T L SRT
Sbjct  5607  TTLRSRT  5613


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2433  SPTSST  2416
             SP SST
Sbjct  5643  SPVSST  5648


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  949   SMRKLQ  966
             SM KL+
Sbjct  6021  SMHKLH  6026


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2187  IFSSV  2173
             +FSSV
Sbjct  6096  VFSSV  6100


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  882   DLNTMLNT  905
             DLN  L T
Sbjct  6203  DLNDVLKT  6210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8881  TSLSGSS  8861
             TS+ GSS
Sbjct  6636  TSMPGSS  6642


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6035  VTENFNM  6055
             +TE  NM
Sbjct  6727  ITESSNM  6733


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  958   SSLM  947
             SSLM
Sbjct  6803  SSLM  6806


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3447  LVSLLAAPST  3418
             L SLL  P T
Sbjct  7096  LPSLLSLPAT  7105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7079  PPIS  7090
             PPIS
Sbjct  7109  PPIS  7112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8881  TSLSGS  8864
             TS SGS
Sbjct  7289  TSISGS  7294


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = -2

Query  7878  ESTAKTILKPTKPP  7837
             ES   TI   T PP
Sbjct  7320  ESSEMTIKTQTSPP  7333


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8701  TSLISR  8718
             T L+SR
Sbjct  7368  TTLVSR  7373


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2433  SPTSST  2416
             SP SST
Sbjct  7405  SPVSST  7410


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  8895  TSTLTLLSPGH  8863
             TS   LL PG+
Sbjct  7423  TS---LLTPGQ  7430


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2716  TSVEV  2730
             TSVE+
Sbjct  7454  TSVEI  7458


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  6187  ISI--ILQISA  6161
             ISI  I  ISA
Sbjct  7599  ISIGTIPRISA  7609


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8966  MSAVL  8952
             MS VL
Sbjct  7848  MSTVL  7852


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2433  SPTSST  2416
             SP SST
Sbjct  7984  SPVSST  7989


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2716  TSVEV  2730
             TSVE+
Sbjct  8033  TSVEI  8037


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8701  TSLISR  8718
             T L+SR
Sbjct  8242  TTLVSR  8247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  852   SALSEGATP  878
             S LS+  TP
Sbjct  8368  SVLSDSETP  8376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  124   TLVTRDPSD  150
             TL  R P D
Sbjct  8538  TLMSRTPGD  8546


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7080  LPSVD  7094
             LPSV+
Sbjct  8552  LPSVE  8556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/33 (36%), Positives = 14/33 (42%), Gaps = 13/33 (39%)
 Frame = +3

Query  1089  NNPPIPVGE-IYKRWIILGLNKIVRMYSPTSIL  1184
             N P + VG  IYK      L       SP S+L
Sbjct  8644  NTPVVNVGTVIYKH-----L-------SPSSVL  8664


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2217  ISVQIST  2197
             IS +IST
Sbjct  8761  ISPEIST  8767


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5345  SAMSTP  5328
             S M TP
Sbjct  8826  SGMTTP  8831


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  973   SHSAASSLM  947
             SHS    LM
Sbjct  9115  SHSQMTALM  9123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 2/12 (16%)
 Frame = +2

Query  5258  DTWAGVEAIIRI  5293
             DT    E I RI
Sbjct  9344  DT--SMETITRI  9353


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4056  PVSAGIT  4036
             P S GIT
Sbjct  9565  PGSSGIT  9571


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1727  PEALFW  1710
             PE L W
Sbjct  9710  PESLSW  9715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  477   PGLLETSE  500
             PGL  T E
Sbjct  9763  PGLVKTTE  9770


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2716  TSVEV  2730
             TSVE+
Sbjct  9789  TSVEI  9793


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4734  RISSEVH  4754
             R SS VH
Sbjct  9818  RTSSSVH  9824


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7878  ESTAKTI  7858
             EST  TI
Sbjct  9950  ESTQMTI  9956


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = -2

Query  4638   SSSCLLA---TQSSPAI  4597
              SSS LL    T  SP +
Sbjct  10020  SSSSLLSLPVT-TSPSV  10035


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1626   PVSQY  1612
              P SQY
Sbjct  10216  PASQY  10220


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1446   TNSATI  1463
              T+S TI
Sbjct  10340  TDSSTI  10345


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3171   VPTLMM  3188
              +PT MM
Sbjct  10519  IPTEMM  10524


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  8686   TTHKATSLISR  8718
              TT    SL+SR
Sbjct  10567  TT---ASLVSR  10574


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  5954   DTEVHNVWATH  5986
              +TE    W TH
Sbjct  10676  ETETRTTWLTH  10686


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +2

Query  1745   NSPSEAGADRQGTVS  1789
              NSP E       TVS
Sbjct  10813  NSPGEPAT----TVS  10823


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7618   ITPTSIP  7598
              +T T IP
Sbjct  10944  VTSTTIP  10950


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7618   ITPTSIP  7598
              +T T IP
Sbjct  11108  VTSTTIP  11114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7618   ITPTSIP  7598
              +T T IP
Sbjct  11162  VTSTTIP  11168


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7456   TASVATHS  7479
              T S  THS
Sbjct  11180  TTSLVTHS  11187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4471   STLERT  4488
              STL RT
Sbjct  11275  STLPRT  11280


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  2359   PEVLSSLIKFSE  2324
              PE   S I +SE
Sbjct  11429  PETTTSFITYSE  11440


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1813   LATTPR  1830
              +AT PR
Sbjct  11719  MATSPR  11724


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8293   ANSSTSSL  8270
              A  STS L
Sbjct  11884  AETSTSTL  11891


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7485   PQTV  7474
              PQTV
Sbjct  11912  PQTV  11915


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  2157   TFGP-----SIP  2137
              TF P     SIP
Sbjct  12052  TFSPGISTSSIP  12063


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8290   NSSTSSLY  8267
              NSS   LY
Sbjct  13053  NSSVGPLY  13060


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6088   LMHLF  6074
              LM LF
Sbjct  13359  LMPLF  13363


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6837   LFPNCSLNLL  6808
              L+  C L LL
Sbjct  13371  LYSGCRLTLL  13380


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = +1

Query  8947   TSRTAD---IELAT  8979
              T RT D     LAT
Sbjct  13448  TTRTPDTSTMHLAT  13461


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6366   QSLHRPV  6386
              Q L RPV
Sbjct  13512  QGLLRPV  13518


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  1725   RSGVETT----TP  1751
              RS V TT    TP
Sbjct  13599  RSSVPTTSIPGTP  13611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2435   HHPHP  2421
              HHP P
Sbjct  13709  HHPDP  13713


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6038   SHLPIL  6021
              SHL IL
Sbjct  13787  SHLLIL  13792


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = -3

Query  1532   PF---FATIETLNNL  1497
              PF   F    T NNL
Sbjct  13925  PFTLNF----TINNL  13935


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4783   ITNL  4772
              ITNL
Sbjct  14329  ITNL  14332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1703  SPTR  1714
             SPTR
Sbjct  12    SPTR  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5777  VKEKY  5791
             V EKY
Sbjct  158   VTEKY  162


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3581  VTDSQ  3595
             VTDS+
Sbjct  217   VTDSH  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  117  TDGHT  103
            TD HT
Sbjct  218  TDSHT  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4728  HPRIS  4742
             H RIS
Sbjct  275   HSRIS  279


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5813  TPISTSA  5793
             TP  TSA
Sbjct  438   TPLETSA  444


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5877  THNFSV  5860
             TH F V
Sbjct  600   THQFAV  605


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6257  TSIR  6268
             TSIR
Sbjct  1012  TSIR  1015


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5293  SATTAVY  5313
             SAT A Y
Sbjct  1358  SATPAAY  1364


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4617  TQSSP  4603
             TQS P
Sbjct  1410  TQSAP  1414


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2520  LDIS  2531
             LDIS
Sbjct  1474  LDIS  1477


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6666  PTTIQ  6680
             PT IQ
Sbjct  1622  PTNIQ  1626


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8303  RRIRQGLERI  8332
             R I Q L R+
Sbjct  1691  RSISQSLGRV  1700


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  589   RVATVL  572
             RV  VL
Sbjct  1699  RVSSVL  1704


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             N Q NT
Sbjct  1724  NTQGNT  1729


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  2545  TGMERITSNIPK  2580
             T M   TS+I K
Sbjct  1775  TVM---TSDISK  1783


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1452  SATIM  1466
             SAT M
Sbjct  1792  SATLM  1796


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +3

Query  759   MVHQAISPRT  788
             M H  I P T
Sbjct  1962  MTHSPITPPT  1971


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6185  NTNSSS  6202
             NT+ SS
Sbjct  2122  NTDASS  2127


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2055  PIMLT  2041
             PI LT
Sbjct  2328  PIVLT  2332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1058  TSSSCYVTS  1032
             TSS   VTS
Sbjct  2490  TSSNSVVTS  2498


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  483   LLETSE  500
             LL TSE
Sbjct  2562  LLTTSE  2567


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6360  TPQSL  6374
             TP+SL
Sbjct  2592  TPESL  2596


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2220  SISVQIST  2197
             SI V  ST
Sbjct  2743  SITVALST  2750


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             LV+S   LE
Sbjct  2773  LVDSSAGLE  2781


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7665  TEKLTITQ  7688
             T  LT TQ
Sbjct  2834  TNRLTATQ  2841


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 15/28 (53%)
 Frame = +3

Query  8778  VPVEPDKIEEANKGENTS----LLHPVS  8849
             +PV P           TS    LL PVS
Sbjct  2848  IPVKP-----------TSAESGLLTPVS  2864


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  9035  LPSPAQ  9018
             LP P Q
Sbjct  2907  LPTPGQ  2912


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3730  ISSNSF  3713
             IS  SF
Sbjct  2948  ISASSF  2953


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7578  MSFPE  7564
             MS+P+
Sbjct  2992  MSYPD  2996


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5370  ARNGASRS  5393
             AR G S S
Sbjct  3023  ARSGSSSS  3030


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +3

Query  942   ETINEE---AAE  968
             +TI EE    AE
Sbjct  3098  QTIAEEEGTTAE  3109


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4994  LIFTP  4980
             L FTP
Sbjct  3113  LTFTP  3117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4383  MSTIL  4369
             MST L
Sbjct  3202  MSTTL  3206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4466  RNPLWKGP  4489
             RN  WK P
Sbjct  3225  RNSPWKTP  3232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8707  LISRTT  8724
             L+S TT
Sbjct  3335  LVSKTT  3340


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4449  FITGTAE  4469
             +IT TA+
Sbjct  3451  YITSTAQ  3457


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3081  ISAIKS  3064
             +SA+KS
Sbjct  3502  VSAVKS  3507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4524  TTAPSP  4507
             TT P P
Sbjct  3552  TTTPNP  3557


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4623  VDRMRI  4640
             V RM I
Sbjct  3680  VQRMSI  3685


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  971   PFCSFLIDGL  942
             P   FL D L
Sbjct  3724  PLSTFLFDSL  3733


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6327  MILPAIS  6347
             MI PA S
Sbjct  3768  MISPATS  3774


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6001  RPQPT  6015
             RP PT
Sbjct  3802  RPDPT  3806


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6527  PVVST  6541
             PVV T
Sbjct  3980  PVVTT  3984


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -2

Query  2067  NRFLPIMLTGVGP  2029
             N FL I L  V P
Sbjct  4010  NSFLTIELRDVSP  4022


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  460   SSSLLAH  440
             SSS LA+
Sbjct  4058  SSSFLAQ  4064


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5472  KATLF  5458
             K TLF
Sbjct  4134  KTTLF  4138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5165  LVSIH  5151
             LV IH
Sbjct  4162  LVPIH  4166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1167  SPTSIL  1184
             SP  IL
Sbjct  4170  SPSNIL  4175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3832  PITVIFL  3812
             P+T +FL
Sbjct  4188  PVTSVFL  4194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3946  TTVYLS  3929
             T V+LS
Sbjct  4190  TSVFLS  4195


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8887  SNTSLSGSS  8861
             S TS  GSS
Sbjct  4286  SSTSVFGSS  4294


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7621  FITPT  7607
             FIT T
Sbjct  4359  FITST  4363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  1679  SSEQTRANSP  1708
             SSE   A SP
Sbjct  4558  SSEPSTATSP  4567


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2075  SESTD  2061
             SE TD
Sbjct  4586  SETTD  4590


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  25    EPGSSL  42
             EP SSL
Sbjct  4594  EPTSSL  4599


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9110  EPGSSL  9127
             EP SSL
Sbjct  4594  EPTSSL  4599


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = +2

Query  3545  LALQDSGLEV-----NIVTD  3589
             LAL  S LE       +VT+
Sbjct  4694  LALDTSTLETSAGTPSVVTE  4713


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2657  TNHPCID  2637
             T HP I+
Sbjct  4823  TTHPSIN  4829


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4990  IKQDIT  5007
             I Q+IT
Sbjct  4902  ISQEIT  4907


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8330  SFPSP  8316
             SFP P
Sbjct  4939  SFPGP  4943


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6882  ISGSPPED  6859
             IS   PED
Sbjct  5055  ISSTLPED  5062


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6726  VTNALP  6709
             VT  LP
Sbjct  5090  VTSSLP  5095


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  8174  TVGD---ST  8157
             TVGD   ST
Sbjct  5159  TVGDPAPST  5167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4617  TQSSP  4603
             TQ SP
Sbjct  5271  TQASP  5275


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  9118  PRLRSGLTRE  9089
             PRLR   T E
Sbjct  5487  PRLRESSTSE  5496


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  33    PRLRSGLTRE  4
             PRLR   T E
Sbjct  5487  PRLRESSTSE  5496


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3930  PCMASP  3913
             P M SP
Sbjct  5637  PSMTSP  5642


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4777  NLASP  4763
             NL SP
Sbjct  5689  NLSSP  5693


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6735  FPIVT  6721
             FP VT
Sbjct  5850  FPFVT  5854


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7089  VDKLDVH  7109
             +D LD H
Sbjct  5969  IDMLDTH  5975


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6726  VTNALP  6709
             VT  LP
Sbjct  5979  VTSSLP  5984


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2438  YFSVPLDED  2464
             YF V  D D
Sbjct  6316  YFTVSPDSD  6324


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1381  AVIISS  1364
             AV+I S
Sbjct  6331  AVVITS  6336


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -3

Query  5510  MPKAFVMK  5487
             MP    MK
Sbjct  6347  MPRSSAMK  6354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2579  SSMTKI  2596
             S M KI
Sbjct  6351  SAMKKI  6356


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4159  GPNRST  4142
             GP R T
Sbjct  6450  GPHRAT  6455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1391  SRRT  1402
             SRRT
Sbjct  6696  SRRT  6699


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  9032  PSPAQAT  9012
             P P Q T
Sbjct  6997  PGPSQST  7003


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1889  TVLEEMS  1909
             TVL E S
Sbjct  7003  TVLPEIS  7009


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  9059  ISSCFLPV  9082
             ISS  LPV
Sbjct  7119  ISSSPLPV  7126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6875  PEIVT  6889
             PE VT
Sbjct  7145  PELVT  7149


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7621  FITPT  7607
             FIT T
Sbjct  7213  FITST  7217


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2768  VLSDV  2754
             VLS+V
Sbjct  7266  VLSEV  7270


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4617  TQSSP  4603
             TQ SP
Sbjct  7328  TQTSP  7332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5785  EISALV  5802
             EI  LV
Sbjct  7366  EITTLV  7371


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4376  VDIIAT  4393
             V+I AT
Sbjct  7456  VEILAT  7461


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1167  SPTSIL  1184
             SP S+L
Sbjct  7491  SPSSVL  7496


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2372  GIPHP  2386
             G PHP
Sbjct  7656  GFPHP  7660


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8998  SPAESPL  8978
             SP  SPL
Sbjct  7685  SPPSSPL  7691


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  6332  TTSYKLTSCNTSVIT  6376
             TTS   T  +TSV T
Sbjct  7799  TTS---TMGDTSVLT  7810


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  9059  ISSCFLPV  9082
             ISS  LPV
Sbjct  7994  ISSSPLPV  8001


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4376  VDIIAT  4393
             V+I AT
Sbjct  8035  VEILAT  8040


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  477   PGLLETS  497
             PG  ETS
Sbjct  8103  PGFFETS  8109


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  25    EPGSSL  42
             EP SSL
Sbjct  8114  EPTSSL  8119


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9110  EPGSSL  9127
             EP SSL
Sbjct  8114  EPTSSL  8119


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3441  SLLAAPST  3418
             SLL  P T
Sbjct  8268  SLLSLPAT  8275


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  8895  TSTLTLLSPG  8866
             TS   LL PG
Sbjct  8297  TS---LLNPG  8303


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5425  DFLDASR  5405
             DF + SR
Sbjct  8399  DFFETSR  8405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8721  SSANQGS  8701
             SSA +GS
Sbjct  8428  SSATEGS  8434


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5992  TGMCGPN  5972
             T M GP+
Sbjct  8459  TSMSGPD  8465


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4785  TTYW  4796
             TT+W
Sbjct  8517  TTFW  8520


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5276  EAIIRI  5293
             E I RI
Sbjct  8768  ETITRI  8773


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3349  YPSLSE  3366
             YP L E
Sbjct  8956  YPGLPE  8961


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5909  EATTTL  5926
             E T TL
Sbjct  8995  ESTSTL  9000


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7848  TKPPTI  7831
             TKP T+
Sbjct  9017  TKPSTV  9022


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1167  SPTSIL  1184
             SP S+L
Sbjct  9237  SPSSVL  9242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  771   AISPRT  788
             AI P T
Sbjct  9366  AITPKT  9371


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3610  HSSTT  3624
             HS TT
Sbjct  9396  HSATT  9400


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4134  ISPV  4145
             ISPV
Sbjct  9546  ISPV  9549


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  347   SRTHLSPSS  321
             SRT   PSS
Sbjct  9616  SRTEVMPSS  9624


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8133  LRPRSSTIL  8107
             L P SST L
Sbjct  9739  LSPVSSTLL  9747


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5422  SQPKT  5436
             S+PKT
Sbjct  9776  SEPKT  9780


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6086  HASVL  6072
             H SVL
Sbjct  9827  HSSVL  9831


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4348  NPPFS  4334
             NP FS
Sbjct  9858  NPAFS  9862


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  465   FAVNPGLLETS  497
             F   PG  ETS
Sbjct  9873  FSLTPGFRETS  9883


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  341   THLSPSSL  318
             T LS SS+
Sbjct  9940  TRLSSSSM  9947


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4245   SLFIDST  4225
              SLF++ T
Sbjct  10012  SLFVEKT  10018


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  980    HSIPFCSF  957
              +SIP  SF
Sbjct  10041  QSIPSSSF  10048


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  8895   TSTLTLLSPG  8866
              TS   LL PG
Sbjct  10051  TS---LLTPG  10057


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5305   QLLQNS  5288
              +LLQ S
Sbjct  10194  HLLQSS  10199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8900   QPPSISSR  8923
              Q PS S R
Sbjct  10415  QVPSLSTR  10422


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  814    STTF  803
              STTF
Sbjct  10664  STTF  10667


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7648   RVIPN  7634
              R IPN
Sbjct  10696  RTIPN  10700


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6973   TPSTIKPSTI  6944
              T S I  STI
Sbjct  10776  TSSAIPTSTI  10785


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  175    LAVAPE  192
              L V PE
Sbjct  11142  LTVSPE  11147


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4005   TATRITFP  3982
              T T IT P
Sbjct  11413  TDTSITIP  11420


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  817    SSTTF  803
              S TTF
Sbjct  11471  STTTF  11475


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  814    STTF  803
              STTF
Sbjct  11558  STTF  11561


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  979    TLSHS  965
              TL HS
Sbjct  11760  TLTHS  11764


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3302   STMFP  3288
              ST FP
Sbjct  11789  STVFP  11793


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2511   HQGLDISTM  2537
              H G + STM
Sbjct  11853  HPGTETSTM  11861


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6537   DTTGL  6523
              +TTGL
Sbjct  11873  ETTGL  11877


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2563   TSNIP  2577
              TS IP
Sbjct  12059  TSSIP  12063


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  12297  GVDAI  12301


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8996   GLSRE  9010
              GL RE
Sbjct  12312  GLNRE  12316


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  12455  GVDAI  12459


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3179   TNDVKQL  3199
              TN +K+L
Sbjct  12484  TNGIKEL  12490


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  12611  GVDAI  12615


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3179   TNDVKQL  3199
              TN +K+L
Sbjct  12640  TNGIKEL  12646


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  12766  GVDAI  12770


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3179   TNDVKQL  3199
              TN +K+L
Sbjct  12795  TNGIKEL  12801


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8996   GLSRE  9010
              GL RE
Sbjct  12937  GLNRE  12941


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  13078  GVDAI  13082


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1434   MSQVTN  1451
              +SQ TN
Sbjct  13103  LSQMTN  13108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3179   TNDVKQL  3199
              TN +K+L
Sbjct  13107  TNGIKEL  13113


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  2483   FTIPSINNETP  2515
              FT+     ETP
Sbjct  13299  FTVQPETSETP  13309


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  991    MQGLL  1005
              +QGLL
Sbjct  13511  LQGLL  13515


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  991    MQGLL  1005
              +QGLL
Sbjct  13667  LQGLL  13671


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  13702  GVDAI  13706


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2736   SPHLNR  2719
              SP L+R
Sbjct  13715  SPRLDR  13720


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8540   HLLLL  8526
              HLL L
Sbjct  13788  HLLIL  13792


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4648   HVLIL  4634
              H LIL
Sbjct  13788  HLLIL  13792


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  991    MQGLL  1005
              +QGLL
Sbjct  13822  LQGLL  13826


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5270   GVEAI  5284
              GV+AI
Sbjct  13857  GVDAI  13861


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6596   NFTDN  6610
              N TDN
Sbjct  13950  NITDN  13954


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6970   PSTIKPST  6947
              P T KP T
Sbjct  14050  PTTPKPAT  14057


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1731   GVETT  1745
              GV+TT
Sbjct  14141  GVDTT  14145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  565    DLSSSDP  545
              +LS  DP
Sbjct  14212  NLSNPDP  14218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6852   LSNP  6863
              LSNP
Sbjct  14213  LSNP  14216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3078   SAIKSF  3061
              S IKS+
Sbjct  14364  SSIKSY  14369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3877   RNSSQL  3894
              RN  QL
Sbjct  14416  RNGTQL  14421


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3840   WLVIL  3854
              W VIL
Sbjct  14453  WAVIL  14457


>sp|P29597.3|TYK2_HUMAN  RecName: Full=Non-receptor tyrosine-protein kinase TYK2
Length=1187

 GENE ID: 7297 TYK2 | tyrosine kinase 2 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7528  VSFHSQDS-CLEL  7493
             VS H QD  CLEL
Sbjct  393   VSIHRQDNKCLEL  405


 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = +3

Query  7548  WGFGVA-LENSF---APL  7589
             WGFG   LE  F   APL
Sbjct  798   WGFGATLLEICFDGEAPL  815


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  4838  SLHRMEEKEI  4867
             S HR ++KEI
Sbjct  580   SFHRVDQKEI  589


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  9019  WAGLGSGEP  9045
             WAG G GEP
Sbjct  34    WAGPGGGEP  42


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  777  SPRTLN  794
            SPRTLN
Sbjct  570  SPRTLN  575


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -1

Query  1465  IMVAEFV------TWL  1436
             IMV E+V       WL
Sbjct  684   IMVTEYVEHGPLDVWL  699


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  2328  ENLIRELKT  2354
             ENLI  LKT
Sbjct  1163  ENLIPILKT  1171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query  2819  VLSIYQDGVHNP  2784
             V+SI  DG+H P
Sbjct  444   VMSI-RDGIHGP  454


 Score = 19.7 bits (39),  Expect(2) =  4089
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +3

Query  1596  HQMKDCTERQANF  1634
             H MK+C E +A F
Sbjct  1146  HLMKNCWETEASF  1158


 Score = 15.5 bits (29),  Expect(2) =  4089
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1713  EESFR  1727
             E SFR
Sbjct  1155  EASFR  1159


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 9/20 (45%)
 Frame = +2

Query  5996  PTDPNP--------QEVVLV  6031
             PTDP P        +E VLV
Sbjct  300   PTDPGPESAAGPPTHE-VLV  318


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6813  LLAICF  6796
             LL ICF
Sbjct  804   LLEICF  809


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6281  KEYAFFY  6301
             KEY F+Y
Sbjct  1074  KEYKFYY  1080


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7548  WGFGVAL  7568
             W FGV L
Sbjct  1085  WSFGVTL  1091


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6504  TVLTFVHG  6481
             T L FVHG
Sbjct  668   THLAFVHG  675


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 9/18 (50%)
 Frame = -3

Query  3320  WLA--------NTLST-M  3294
             WLA        N LST M
Sbjct  778   WLAPECLPGGANSLSTAM  795


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5353  LLDRGE  5370
             LL+RGE
Sbjct  1127  LLERGE  1132


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9116  QAQIW  9102
             QAQ+W
Sbjct  80    QAQVW  84


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  31  QAQIW  17
           QAQ+W
Sbjct  80  QAQVW  84


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6462  LLLHFRI  6442
             L+L FRI
Sbjct  99    LMLYFRI  105


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3601  IRNHSSTTR  3627
             IR HS  TR
Sbjct  223   IRQHSALTR  231


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1901  EMSLPGR  1921
             E+SLP R
Sbjct  404   ELSLPSR  410


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2727  LNRCCL  2710
             L RCCL
Sbjct  547   LRRCCL  552


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7928  GSETIMV  7908
             G E IMV
Sbjct  680   GPENIMV  686


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4123  VSMYCF  4106
             VS+YC+
Sbjct  911   VSLYCY  916


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6560  SLAEEEVVI  6586
             SL  EEV I
Sbjct  50    SLTAEEVCI  58


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  877  GVAPSD  860
            GVAP D
Sbjct  297  GVAPTD  302


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 10/21 (47%)
 Frame = +3

Query  558  LRSLYNTVATLYCVHQRIEIK  620
            LR LY         H+ I IK
Sbjct  951  LRTLY---------HEHI-IK  961


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4466  RNPLW  4480
             R PLW
Sbjct  370   REPLW  374


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  287  VAAPRL  270
            VA PRL
Sbjct  438  VAPPRL  443


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8901  SRLAFHHV  8924
             S L FH V
Sbjct  577   SQLSFHRV  584


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +1

Query  5740  RLIERAEDSGNESEG  5784
             RL  R E SG+  EG
Sbjct  607   RL--RVEGSGDPEEG  619


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9017  PGRDWG  9034
             PGRD G
Sbjct  629   PGRDRG  634


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
 Frame = -2

Query  7635  ICSRDLLLQ---LAFQGT  7591
             +C R+ LL    LA +GT
Sbjct  735   VCGRNILLARLGLA-EGT  751


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1033  PLGSL  1019
             PLGSL
Sbjct  982   PLGSL  986


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 22/44 (50%)
 Frame = -1

Query  2716  LSQLLYF----C-SMLPYF*VRSYIQI---IH-------VLIDN  2630
             L QLL F    C  M        Y +    IH       VL DN
Sbjct  997   LAQLLLFAQQICEGM-------AYLHAQHYIHRDLAARNVLLDN  1033


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4601  PSVFH  4587
             P VFH
Sbjct  889   PTVFH  893


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5026  YCRDPT  5009
             YC DPT
Sbjct  914   YCYDPT  919


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQL L
Sbjct  997   LAQLLL  1002


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  5728  RLIDRLIERAE  5760
             RL + L ER E
Sbjct  1123  RLTE-LLERGE  1132


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = -1

Query  8464  PCFSRSRDAAPT----LSAAG  8414
             PC+ R    APT     SAAG
Sbjct  290   PCYIRDSGVAPTDPGPESAAG  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7407  DNNCL  7393
             DN CL
Sbjct  399   DNKCL  403


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4715  VMSI  4704
             VMSI
Sbjct  444   VMSI  447


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  932  LHGCLM  915
            L+GCL+
Sbjct  533  LQGCLL  538


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3462  PAFPNLVSLL  3433
             P F NL+  L
Sbjct  1160  PTFENLIPIL  1169


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1772  YRLLL  1758
             YRL L
Sbjct  481   YRLIL  485


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  737  YRVIL  723
            YR IL
Sbjct  481  YRLIL  485


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -2

Query  3900  LSQLATISF  3874
             LSQL   SF
Sbjct  576   LSQL---SF  581


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4415  QKQIT  4429
             QK+IT
Sbjct  586   QKEIT  590


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  5982  VAQTLCTSVSY  5950
             VAQ L    SY
Sbjct  714   VAQQLASALSY  724


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5884  DCDPQ  5870
             DC PQ
Sbjct  935   DCGPQ  939


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2576  QSSMTKILE  2602
             QS  TK LE
Sbjct  1102  QSPPTKFLE  1110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1302  PTRFL  1288
             PT FL
Sbjct  1105  PTKFL  1109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7771  KFVELV  7788
             KF EL+
Sbjct  1107  KFLELI  1112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7636  NLFQRF  7619
             N F RF
Sbjct  236   NVFRRF  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4352  PQSPLF  4335
             PQ  LF
Sbjct  347   PQASLF  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2003  HKAIG  2017
             HKA+G
Sbjct  359   HKAVG  363


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  241  PA--SRELLW  218
            PA   RE LW
Sbjct  365  PADRPREPLW  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1096  GLFVIH  1079
             GL+ IH
Sbjct  469   GLYLIH  474


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3818  ISHVHL  3801
             +SH HL
Sbjct  665   VSHTHL  670


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41   WLTRE  55
            WL RE
Sbjct  698  WLRRE  702


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL RE
Sbjct  698   WLRRE  702


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  737  YRVILADL  714
            +R IL DL
Sbjct  859  FRTILRDL  866


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5695  YRKILR  5712
             +R ILR
Sbjct  859   FRTILR  864


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  2141  FLALILLVQSQ  2109
             FL LI   Q Q
Sbjct  1108  FLELIGIAQGQ  1118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  910   PTVFS  896
             P VFS
Sbjct  1181  PSVFS  1185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7902  PCLTLF  7885
             PC  LF
Sbjct  69    PCFNLF  74


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7382  TVQARQLL  7405
             T Q  QLL
Sbjct  137   TAQGMQLL  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8818  ERTPAC  8835
             ER P C
Sbjct  273   ERVPVC  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5092  SFVTL  5078
             SFV L
Sbjct  415   SFVSL  419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5389  LLAPF  5375
             LL PF
Sbjct  455   LLEPF  459


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  400  GQGERKNI  423
            GQG R N+
Sbjct  596  GQGTRTNV  603


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3370  MVPVRER  3390
             +VP R+R
Sbjct  627   LVPGRDR  633


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5983  CGPNIM  5966
             CG NI+
Sbjct  736   CGRNIL  741


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  6149  VSLKCTDLKND  6181
             VSL C D  ND
Sbjct  911   VSLYCYDPTND  921


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3757  WNQESTIFR  3783
             W QE  I R
Sbjct  944   WKQEIDILR  952


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6083  HEDII  6097
             HE II
Sbjct  956   HEHII  960


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8950  KYSGC  8936
             KY GC
Sbjct  961   KYKGC  965


>gb|AAY16632.1|  immunoglobulin kappa light chain [Homo sapiens]
Length=115


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
 Frame = +2

Query  7004  DTITLPCRIKQIIN---MW--QKVGKA  7069
             DT+T  CR  Q I     W  QK GKA
Sbjct  14    DTVTITCRASQTISNSLAWYQQKPGKA  40


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  2     TQSPS  6


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  777  SPRTLNAWV  803
            SP TL A V
Sbjct  4    SPSTLSASV  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5576  LLYQSS  5593
             L YQ S
Sbjct  44    LIYQAS  49


>sp|P14866.2|HNRPL_HUMAN  RecName: Full=Heterogeneous nuclear ribonucleoprotein L; Short=hnRNP 
L
Length=589

 GENE ID: 3191 HNRNPL | heterogeneous nuclear ribonucleoprotein L [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 2/15 (13%)
 Frame = +3

Query  4149  RLGPPVGG--RESSR  4187
             R+GPPVGG  R  SR
Sbjct  344   RMGPPVGGHRRGPSR  358


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -1

Query  3814  LMF-ILGLIYSI  3782
             L+F IL  IYSI
Sbjct  195   LLFTILNPIYSI  206


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  5842  HPKEHGAPSPPPSPQ  5798
             HP     P PPP P+
Sbjct  365   HP-----PPPPPPPE  374


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = -2

Query  6750  LIF----PIFPIVTNAL  6712
             L F    PI+ I T+ L
Sbjct  195   LLFTILNPIYSITTDVL  211


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5525  RSGDSDE  5545
             R GDSD+
Sbjct  181   RPGDSDD  187


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  2744  PDKKHQKEPPFL  2779
             P+K  Q +PP L
Sbjct  300   PNKR-QRQPPLL  310


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  1684  RADQSQQPHQKR  1719
             R +Q QQP + R
Sbjct  15    RLEQRQQPDEQR  26


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1130  PSFINFS  1110
             P F+N+S
Sbjct  168   PAFVNYS  174


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6100  FMGSKP  6117
             FM SKP
Sbjct  414   FMKSKP  419


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5794  ALVEM  5808
             A+VEM
Sbjct  422   AMVEM  426


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  402  ALTEFFPI  379
            AL EF PI
Sbjct  121  ALQEFGPI  128


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4573  LCFS  4562
             LCFS
Sbjct  580   LCFS  583


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5740  RLIERAE  5760
             RL  RAE
Sbjct  4     RLLPRAE  10


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4808  RRKRL  4822
             RR RL
Sbjct  12    RRRRL  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8024  IRSLIE  8007
             IR LI+
Sbjct  106   IRGLID  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = -1

Query  3424  IYIEG---FCSY  3398
             IYI G   F  Y
Sbjct  162   IYIAGHPAFVNY  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8685  YHTQGY  8702
             YH +GY
Sbjct  328   YHDEGY  333


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 3/20 (15%)
 Frame = -1

Query  9037  HSPVPPRPRLPGKSP-AESP  8981
             H P PP P  P   P A+SP
Sbjct  365   HPPPPPPP--PEYGPHADSP  382


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1409  MAGSSYSL  1386
             M G SY L
Sbjct  460   MPGQSYGL  467


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6462  RRSMEQ  6479
             RR +EQ
Sbjct  13    RRRLEQ  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3111  IKFIKS  3128
             +KF KS
Sbjct  412   VKFMKS  417


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7339  QEPKEQ  7322
             Q+P EQ
Sbjct  20    QQPDEQ  25


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  4009  MNC  4001
             MNC
Sbjct  394   MNC  396


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7596  GTAVVQM  7576
             G A V+M
Sbjct  420   GAAMVEM  426


>pdb|1W0R|A  Chain A, Solution Structure Of Dimeric Form Of Properdin By X-Ray 
Solution Scattering And Analytical Ultracentrifugation
 pdb|1W0R|B  Chain B, Solution Structure Of Dimeric Form Of Properdin By X-Ray 
Solution Scattering And Analytical Ultracentrifugation
 pdb|1W0S|A  Chain A, Solution Structure Of Trimeric Form Of Properdin By 
X-Ray Solution Scattering And Analytical Ultracentrifugation
 pdb|1W0S|B  Chain B, Solution Structure Of Trimeric Form Of Properdin By 
X-Ray Solution Scattering And Analytical Ultracentrifugation
 pdb|1W0S|C  Chain C, Solution Structure Of Trimeric Form Of Properdin By 
X-Ray Solution Scattering And Analytical Ultracentrifugation
Length=442


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  5276  PLLPKYP  5256
             PLLPKYP
Sbjct  382   PLLPKYP  388


 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = +2

Query  7577  ICTTAVP------WNASW  7612
             IC TAVP      W+ SW
Sbjct  278   ICNTAVPCPVDGEWD-SW  294


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1805  VTLWQRPL  1828
             VT W RPL
Sbjct  402   VTFWGRPL  409


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5927  FCASDA  5944
             FCA DA
Sbjct  268   FCAGDA  273


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1001  RPCMH  987
             RPC+H
Sbjct  426   RPCLH  430


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +1

Query  7072  VCPSH-------QWT  7095
             VCP H        WT
Sbjct  162   VCPTHGAWATWGPWT  176


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1548  CRAPR  1562
             CR PR
Sbjct  48    CRSPR  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3486  CLPLLVTYP  3460
             C PLL  YP
Sbjct  380   CTPLLPKYP  388


 Score = 17.2 bits (33),  Expect(2) = 22290
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  2179  RKN-KSIS  2199
             R N KSIS
Sbjct  302   RRNMKSIS  309


 Score = 15.1 bits (28),  Expect(2) = 22290
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2065  VDSDW  2079
             VD +W
Sbjct  287   VDGEW  291


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = +1

Query  5887  LWGT-------CVEGS  5913
             LW T       C EGS
Sbjct  55    LWSTWAPCSVTCSEGS  70


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7095  CPLMGG  7078
             CP MGG
Sbjct  106   CPEMGG  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2643  TWMICM  2660
             TW  CM
Sbjct  360   TWGLCM  365


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1217  RLCRPVL  1237
             RLC P L
Sbjct  378   RLCTPLL  384


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8526  EEEE  8537
             EEEE
Sbjct  438   EEEE  441


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6011  GWGLW  5997
             GWG W
Sbjct  114   GWGPW  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6011  GWGLW  5997
             GWG W
Sbjct  232   GWGPW  236


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1779  PCLSAPA  1759
             PCL  PA
Sbjct  427   PCLHVPA  433


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6531  TGLIPC  6514
             TGL PC
Sbjct  222   TGLPPC  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3402  PTMGSFSNW  3376
             P MG  S W
Sbjct  107   PEMGGWSGW  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8444  RCCSHP  8427
             R C HP
Sbjct  134   RACNHP  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  187  PEQGPESE  210
            P Q  ESE
Sbjct  148  PGQAQESE  155


>sp|P60608.1|EFC2_HUMAN  RecName: Full=HERV-F(c)2_7q36.2 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein; AltName: Full=Fc2deltaenv; 
Includes: RecName: Full=Surface protein; Short=SU; 
Includes: RecName: Full=Truncated transmembrane protein; Short=TM
Length=527


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = -2

Query  8817  LYWP--LLSYLAQLV  8779
             L WP  LLSY  +LV
Sbjct  29    LHWPENLLSYIDELV  43


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 5/16 (31%)
 Frame = -3

Query  7784  NST-N----LPIYLIP  7752
             NST N    LPI LIP
Sbjct  369   NSTGNHTLCLPISLIP  384


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -3

Query  8747  ISDPW-P-W  8727
             ISDPW P W
Sbjct  184   ISDPWDPRW  192


 Score = 18.9 bits (37),  Expect(2) =  1449
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1146  LIPGLSIF  1123
             LIPGL  +
Sbjct  382   LIPGLTLY  389


 Score = 18.9 bits (37),  Expect(2) =  1449
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = -2

Query  1050  FLLCHFPLV----LSSGLV  1006
             FL    PLV    L S LV
Sbjct  414   FL----PLVLGISLASSLV  428


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 15/35 (42%)
 Frame = -2

Query  3819  YFSCSSWALSIPSK--NST---------FLIPALT  3748
             YF C S  L    K  NST          LIP LT
Sbjct  357   YFWCNS-TLT---KVLNSTGNHTLCLPISLIPGLT  387


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2393  LKKKKS  2410
             LKKKKS
Sbjct  518   LKKKKS  523


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8738  PWPWC  8724
             PW WC
Sbjct  144   PWHWC  148


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 4/16 (25%)
 Frame = +2

Query  6914  FFYCNSTQL---FNST  6952
             +F CNST L    NST
Sbjct  357   YFWCNST-LTKVLNST  371


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4790  CCYY  4779
             CCYY
Sbjct  501   CCYY  504


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  4501  EELCWSFP  4478
             EE  WSFP
Sbjct  17    EE-SWSFP  23


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  4412  LQKQITKI-----QN  4441
             LQ QIT +     QN
Sbjct  465   LQRQITTVAQVAAQN  479


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7601  NASWSN  7618
             NASW N
Sbjct  337   NASWCN  342


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  833  WAESLLFY  810
            W E LL Y
Sbjct  31   WPENLLSY  38


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +3

Query  852  SALSEGA------TPQDLNT  893
            S L  GA      T QDL T
Sbjct  430  SGLGKGALTHSIQTSQDLST  449


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/36 (30%), Positives = 12/36 (33%), Gaps = 21/36 (58%)
 Frame = -1

Query  2656  QIIHVLIDNYVWILFSKRL*DFCHATLEYCW*SFPS  2549
             Q I+VL                    LE  W SFPS
Sbjct  10    QFIQVL--------------------LEESW-SFPS  24


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5543  EELIRT  5560
             E LIRT
Sbjct  152   EALIRT  157


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -3

Query  2903  SDLPNSI-SP---LTS  2868
             SDL  SI S    LTS
Sbjct  227   SDLASSIQSAEKELTS  242


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  6277  AE--RICIFL  6300
             AE  R C FL
Sbjct  488   AEKGRTCLFL  497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  757  CPWMFCTI  734
            CPW  C I
Sbjct  143  CPWHWCNI  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2313  FLHLVL  2296
             FL LVL
Sbjct  414   FLPLVL  419


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2846  CLFL  2835
             CLFL
Sbjct  494   CLFL  497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7707  LKNRKTSK  7730
             LK  K SK
Sbjct  518   LKKKKSSK  525


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3262  KFRSLSP  3242
             KF SL P
Sbjct  108   KFSSLGP  114


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4605  PAICF  4591
             PA CF
Sbjct  119   PALCF  123


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5499  FCYET  5485
             FCY T
Sbjct  331   FCYST  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2912  LGKSDLPNSI  2883
             LGK  L  SI
Sbjct  432   LGKGALTHSI  441


 Score = 15.5 bits (29),  Expect(2) = 42317
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8491  LPMLLVPG  8514
             LP  L+PG
Sbjct  378   LPISLIPG  385


 Score = 15.1 bits (28),  Expect(2) = 42317
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8598  DLSHFL  8615
             +LSH L
Sbjct  393   ELSHLL  398


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3662  EQLIKKEK  3685
             E LI  EK
Sbjct  152   EALIRTEK  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7595  PWNASW  7612
             PW+  W
Sbjct  187   PWDPRW  192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  522  QLQP  533
            QLQP
Sbjct  243  QLQP  246


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  230  RAPLVSLSL  204
            R PLV   L
Sbjct  288  RPPLVAVPL  296


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4236  IDSTTP  4219
             I+S TP
Sbjct  304   INSSTP  309


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 9/22 (40%)
 Frame = -1

Query  310  QNFWRTHQSPPLASCRARFSKP  245
            QNF   HQ         RF KP
Sbjct  49   QNF---HQHE------VRFDKP  61


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  849  FSALSE  866
            FS L E
Sbjct  70   FSSLTE  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  475  LTANRSS  455
            LT N SS
Sbjct  73   LTENWSS  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5907  RKQPPLYF  5930
             RK P L F
Sbjct  116   RKNPALCF  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +1

Query  7312  NRS----FVPWVLG  7341
             N S    F P VLG
Sbjct  407   NKSKWAIFLPLVLG  420


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2141  FLALIL  2124
             FL L+L
Sbjct  414   FLPLVL  419


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9009  SLESPQR  8989
             SL+S QR
Sbjct  461   SLDSLQR  467


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2285  KKKDSTK  2305
             KKK S K
Sbjct  519   KKKKSSK  525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1972  LSYFD  1958
             LSY D
Sbjct  36    LSYID  40


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5276  EAIIR  5290
             EA IR
Sbjct  152   EALIR  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8412  EPAAD  8426
             +PAAD
Sbjct  245   QPAAD  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = +1

Query  4429  KNSKFS-------G--LLQ  4458
             K S FS       G  LLQ
Sbjct  252   KSSRFSWLTLISEGAQLLQ  270


>emb|CAD88716.1|  immunoglobulin lambda light chain variable region [Homo sapiens]
Length=90


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -1

Query  5479  GNESNTFYNS-NWYKQF  5432
             GN SN   NS NWY QF
Sbjct  12    GNSSNIGSNSVNWYQQF  28


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  6529  SSINSTAVKW  6558
             S I S  V W
Sbjct  15    SNIGSNSVNW  24


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3954  IPGLQS  3937
             I GLQS
Sbjct  64    ISGLQS  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8139  GKPSNIG  8159
             G  SNIG
Sbjct  12    GNSSNIG  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  290  PVAAPRL  270
            P  APRL
Sbjct  29   PGTAPRL  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8168  GDSTNI  8151
             G+S NI
Sbjct  12    GNSSNI  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5352  RLFCYVDTQ  5326
             RLF Y D Q
Sbjct  34    RLFMYSDNQ  42


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  4180  DSRPPTGGPNR  4148
             D   P G P+R
Sbjct  40    DNQRPSGVPDR  50


>ref|NP_002612.1|  properdin precursor [Homo sapiens]
 ref|NP_001138724.1|  properdin precursor [Homo sapiens]
Length=469

 GENE ID: 5199 CFP | complement factor properdin [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  5276  PLLPKYP  5256
             PLLPKYP
Sbjct  409   PLLPKYP  415


 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = +2

Query  7577  ICTTAVP------WNASW  7612
             IC TAVP      W+ SW
Sbjct  305   ICNTAVPCPVDGEWD-SW  321


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1805  VTLWQRPL  1828
             VT W RPL
Sbjct  429   VTFWGRPL  436


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5927  FCASDA  5944
             FCA DA
Sbjct  295   FCAGDA  300


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1001  RPCMH  987
             RPC+H
Sbjct  453   RPCLH  457


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +1

Query  7072  VCPSH-------QWT  7095
             VCP H        WT
Sbjct  189   VCPTHGAWATWGPWT  203


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1548  CRAPR  1562
             CR PR
Sbjct  75    CRSPR  79


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3486  CLPLLVTYP  3460
             C PLL  YP
Sbjct  407   CTPLLPKYP  415


 Score = 17.2 bits (33),  Expect(2) = 21781
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  2179  RKN-KSIS  2199
             R N KSIS
Sbjct  329   RRNMKSIS  336


 Score = 15.1 bits (28),  Expect(2) = 21781
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2065  VDSDW  2079
             VD +W
Sbjct  314   VDGEW  318


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6270  PLMLVLIL  6247
             PL+L L L
Sbjct  15    PLLLLLTL  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = +1

Query  5887  LWGT-------CVEGS  5913
             LW T       C EGS
Sbjct  82    LWSTWAPCSVTCSEGS  97


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5389  LLAPFLALL  5363
             LL P L LL
Sbjct  12    LLPPLLLLL  20


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7095  CPLMGG  7078
             CP MGG
Sbjct  133   CPEMGG  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2643  TWMICM  2660
             TW  CM
Sbjct  387   TWGLCM  392


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1217  RLCRPVL  1237
             RLC P L
Sbjct  405   RLCTPLL  411


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8526  EEEE  8537
             EEEE
Sbjct  465   EEEE  468


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6011  GWGLW  5997
             GWG W
Sbjct  141   GWGPW  145


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6011  GWGLW  5997
             GWG W
Sbjct  259   GWGPW  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1779  PCLSAPA  1759
             PCL  PA
Sbjct  454   PCLHVPA  460


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  375  LILPRLIL  352
            L LP L L
Sbjct  11   LLLPPLLL  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6531  TGLIPC  6514
             TGL PC
Sbjct  249   TGLPPC  254


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3402  PTMGSFSNW  3376
             P MG  S W
Sbjct  134   PEMGGWSGW  142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8444  RCCSHP  8427
             R C HP
Sbjct  161   RACNHP  166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  187  PEQGPESE  210
            P Q  ESE
Sbjct  175  PGQAQESE  182


>sp|O43316.1|PAX4_HUMAN  RecName: Full=Paired box protein Pax-4
Length=350

 GENE ID: 5078 PAX4 | paired box 4 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 7/20 (35%)
 Frame = +2

Query  3860  PPVVAKEIVASCDKCQLKGE  3919
             PPVVA   +A     QLKGE
Sbjct  82    PPVVAR--IA-----QLKGE  94


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 4/19 (21%)
 Frame = +1

Query  8827  PACYTL*ACMGWMTRREKC  8883
             P CY L  C  W T  E C
Sbjct  276   PSCYQL--C--WATAPERC  290


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6879  SGSPPEDCLK  6850
             S  PP  CLK
Sbjct  292   SDTPPKACLK  301


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1566  KGCWKCG  1586
             K CW CG
Sbjct  301   KPCWDCG  307


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7011  SPSHAE  7028
             SPS+AE
Sbjct  178   SPSQAE  183


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1901  EMSLPG  1918
             EM LPG
Sbjct  234   EMQLPG  239


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7503  AWSCL  7489
             AW CL
Sbjct  322   AWPCL  326


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +2

Query  8219  ATAIAVAEGTDRV  8257
             ATA    E T RV
Sbjct  204   ATATSLPEDTVRV  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3510  QQIRRL  3527
             QQI RL
Sbjct  28    QQIVRL  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  350  RSRTHLSPS  324
            R RT  SPS
Sbjct  172  RNRTIFSPS  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3984  EKLSW  3998
             EKL W
Sbjct  229   EKLKW  233


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8684  LPHTRL  8701
             LP TRL
Sbjct  137   LPCTRL  142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4795  GVCIQEK  4815
             G C Q+K
Sbjct  111   GLCTQDK  117


>emb|CAB51302.1|  immunoglobulin kappa chain variable region [Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 9/34 (26%)
 Frame = +2

Query  7004  DTITLPCRIKQIINM---W--QKVGKA----MYA  7078
             DT+T  CR  Q I     W  QK GKA     YA
Sbjct  17    DTVTITCRASQDISKSLAWFQQKPGKAPKSLIYA  50


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YP TFG
Sbjct  94    YPITFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>pdb|1GLO|A  Chain A, Crystal Structure Of Cys25ser Mutant Of Human Cathepsin 
S
Length=217


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 22/38 (57%)
 Frame = +2

Query  3014  RE-ILKE------PV-------H--------GVYYDPS  3061
             RE +LKE      PV       H        GVYY+PS
Sbjct  120   REDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPS  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  2008  FMSTDFYEYLI  1976
             FM T F +Y I
Sbjct  70    FMTTAF-QYII  79


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3140  LKTGK  3154
             LKTGK
Sbjct  40    LKTGK  44


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2448  TEKY  2437
             TEKY
Sbjct  58    TEKY  61


>ref|NP_005689.2|  secretory carrier-associated membrane protein 3 isoform 1 [Homo 
sapiens]
Length=347

 GENE ID: 10067 SCAMP3 | secretory carrier membrane protein 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3718  SFVCWY  3701
             SFVCWY
Sbjct  213   SFVCWY  218


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  4489  WSFPKWISA--VP  4457
             W F  WISA  VP
Sbjct  257   WGFSGWISALVVP  269


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6472  WNRTMYK  6492
             W R MYK
Sbjct  217   WYRPMYK  223


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2767  FFLMFFV  2747
             FF  FFV
Sbjct  236   FFFIFFV  242


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  369  ELDRWE  386
            ELDR E
Sbjct  112  ELDRRE  117


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7136  RDGGN  7150
             RDGGN
Sbjct  5     RDGGN  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6660  QDPTTIQ  6680
             QDP  IQ
Sbjct  22    QDPAVIQ  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6843  VLLFPNCS  6820
             VLLF  CS
Sbjct  206   VLLFTPCS  213


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7525  IPKGSTA  7545
             +PKG TA
Sbjct  268   VPKGNTA  274


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = +2

Query  7844  LVGLRIVF---AVLSIV  7885
             LV L   F   AVL IV
Sbjct  281   LVAL--LFTGIAVLGIV  295


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5499  FCYETN  5482
             FC ETN
Sbjct  189   FCVETN  194


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4854  SILW  4843
             SILW
Sbjct  202   SILW  205


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3049  IHSMY  3035
             IHS+Y
Sbjct  300   IHSLY  304


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4929  FSDSAIRKA  4955
             FS+ A+R A
Sbjct  323   FSNPAVRTA  331


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8332  NPFQ  8321
             NPFQ
Sbjct  19    NPFQ  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7602  FQGTAVVQ  7579
             FQ  AV+Q
Sbjct  21    FQDPAVIQ  28


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8892  STLTLL  8875
             STL LL
Sbjct  174   STLALL  179


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  576  TVATLY  593
            TV T+Y
Sbjct  163  TVSTMY  168


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2767  FFLMFFV  2747
             FF  FF+
Sbjct  233   FFVFFFI  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7797  VMLNQFHKL  7771
             VML   H L
Sbjct  295   VMLKRIHSL  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4866  YSTQ  4877
             YSTQ
Sbjct  86    YSTQ  89


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5856  LQIINIP  5836
             LQ I IP
Sbjct  249   LQAIGIP  255


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 13/27 (48%)
 Frame = -2

Query  2142  IPGFNFTG------------TVSIGLM  2098
             IPG  F G             VS+ LM
Sbjct  254   IPGWGFSGWISALVVPKGNTAVSV-LM  279


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 7/22 (31%)
 Frame = +2

Query  6113  SLKPCVKLTPLCVSLKCTDLKN  6178
             SL P  KL P       T+ KN
Sbjct  68    SLQPSRKLSP-------TEPKN  82


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  5356  LDRGEQEME  5382
             LDR E E++
Sbjct  113   LDRRERELQ  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4353  PPIPPF  4336
             PP P F
Sbjct  136   PPLPSF  141


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = -2

Query  2004  CP------Q-ISMSI  1981
             CP      Q ISM I
Sbjct  142   CPVQPCFFQDISMEI  156


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -2

Query  8829  W-CS---LLYWPLLSYLA  8788
             W CS   LL    L +LA
Sbjct  171   WMCSTLALL----LNFLA  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6462  LLLHF  6448
             LLL F
Sbjct  178   LLLNF  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  447  LPILYVLIY  421
            L IL VL +
Sbjct  201  LSILWVLLF  209


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3326  IPEWEF  3343
             IP W F
Sbjct  254   IPGWGF  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP P P P
Sbjct  57    APAPLPPP  64


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  60    PLPPP  64


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  6592  RS----NYYLFF  6569
             RS    N++ FF
Sbjct  226   RSDSSFNFFVFF  237


>sp|Q07000.1|1C15_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-15 alpha 
chain; AltName: Full=MHC class I antigen Cw*15; Flags: 
Precursor
Length=366


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE  NY
Sbjct  75    WVEQEGPEYWDRETQNY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TLL LLS
Sbjct  8     TLLLLLS  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  118   IIQRMY  123


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  8960  AVLEVLRMQLSGHVM  8916
             AVL VL     G VM
Sbjct  319   AVLAVL-----GAVM  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLLLLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


>ref|NP_003599.2|  psychosine receptor [Homo sapiens]
Length=337

 GENE ID: 8477 GPR65 | G protein-coupled receptor 65 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
 Frame = -1

Query  4678  TYIWCFTKLFHVLILI  4631
             T++ CFT  FHV+ LI
Sbjct  234   TFVLCFTP-FHVMLLI  248


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7903  IFTIIVSDP  7929
             IF IIVS P
Sbjct  22    IFVIIVSIP  30


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 4/20 (20%)
 Frame = +1

Query  544  QDQKNLDHYIIQ*QPSIVCI  603
            ++Q +LDHY     P IV I
Sbjct  7    EEQHDLDHYLF---P-IVYI  22


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 33/50 (66%)
 Frame = -3

Query  8723  VVLLIR---E----------------------VAL----CVVDPQIKDIL  8661
             V LLIR   E                      VAL    CV DP    IL
Sbjct  244   VMLLIRCILEHAVNFEDHSNSGKRTYTMYRITVALTSLNCVADP----IL  289


 Score = 20.2 bits (40),  Expect(2) =  3153
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  426  IYIFSFPL-----ALT  394
            IY FS  L     ALT
Sbjct  51   IYLFSLSLSDLLYALT  66


 Score = 16.3 bits (31),  Expect(2) =  3153
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  444  PILYVLIYIFSFP  406
            PI Y+ + I S P
Sbjct  18   PIVYIFVIIVSIP  30


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7514  AVERYL  7531
             AV+RYL
Sbjct  109   AVDRYL  114


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  1331  SLTIWVRILD  1302
             SL IW  IL+
Sbjct  135   SLSIW--ILE  142


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/26 (30%), Positives = 8/26 (30%), Gaps = 13/26 (50%)
 Frame = +2

Query  2777  LWMGYELHPDKWTVQPIVLPEKDSWT  2854
             LW  Y      W         KD WT
Sbjct  69    LWIDY-----TWN--------KDNWT  81


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 10/20 (50%)
 Frame = -3

Query  6668  WVL---YN*FLQMCSAVLLW  6618
             W+L   +N       AV+LW
Sbjct  139   WILETIFN-------AVMLW  151


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4238  NKELKKII  4261
             NKE K II
Sbjct  218   NKEKKRII  225


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +2

Query  5432  KLLVPIAIVKSVAFI  5476
             KLLV I     V F+
Sbjct  226   KLLVSI----TVTFV  236


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7916  IMVNIPA  7896
             I V IPA
Sbjct  25    IIVSIPA  31


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5564  RLIKLL  5581
             R IKLL
Sbjct  223   RIIKLL  228


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7639  ESHDLD  7656
             E HDLD
Sbjct  8     EQHDLD  13


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3245  PILLCF  3228
             PIL CF
Sbjct  287   PILYCF  292


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4431  FVICF  4417
             FV CF
Sbjct  235   FVLCF  239


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7763  YLIPII  7746
             YL PI+
Sbjct  15    YLFPIV  20


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2573  ILLVILSIP  2547
             I  +I SIP
Sbjct  22    IFVIIVSIP  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6833  FQIVLLI  6813
             F++ LLI
Sbjct  242   FHVMLLI  248


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1498  RLLSVS  1515
             R LSVS
Sbjct  321   RILSVS  326


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1420  TLALW  1406
             TL LW
Sbjct  66    TLPLW  70


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2465  FRKYTAFTIP  2494
             FR  T + IP
Sbjct  186   FRTCTGYAIP  195


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/26 (30%), Positives = 9/26 (34%), Gaps = 16/26 (61%)
 Frame = -2

Query  7074  YIAFPTFCHMFIICFILHGRVIVSLP  6997
             YI        F+I        IVS P
Sbjct  21    YI--------FVI--------IVSIP  30


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2298  LSFFFM  2281
             L FFF+
Sbjct  120   LKFFFL  125


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8145  PSNIG  8159
             P NIG
Sbjct  30    PANIG  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  1652  FLQGKAREFSSE  1687
             FLQ K  E  SE
Sbjct  40    FLQAK-KE--SE  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1883  DDTVLE  1900
             D+TV E
Sbjct  153   DETVVE  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  820  FSSTTF  803
            +SST F
Sbjct  99   YSSTAF  104


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2570  LLVILSI  2550
             L+V LSI
Sbjct  132   LMVSLSI  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3829  ITVIF  3815
             ITV F
Sbjct  231   ITVTF  235


>emb|CAB75584.1|  human leucocyte antigen C [Homo sapiens]
Length=275


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE  NY
Sbjct  75    WVEQEGPEYWDRETQNY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TLL LLS
Sbjct  8     TLLLLLS  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  118   IIQRMY  123


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLLLLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


>sp|Q9NR97.1|TLR8_HUMAN  RecName: Full=Toll-like receptor 8; AltName: CD_antigen=CD288; 
Flags: Precursor
Length=1041

 GENE ID: 51311 TLR8 | toll-like receptor 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 19/48 (39%)
 Frame = -3

Query  2444  KNMHHPH-PVLLLIFSFLTLRDV------VFLIELPRSLE-----FSY  2337
             KNM  PH  VL L F +L    V       FL  LPR LE     F Y
Sbjct  308   KNM--PHLKVLDLEFNYL----VGEIASGAFLTMLPR-LEILDLSFNY  348


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  1795  VKGYSSLS  1772
             VKGY SLS
Sbjct  867   VKGYRSLS  874


 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 6/23 (26%)
 Frame = +2

Query  3521  KTELQAIYLALQ---DSGLEVNI  3580
             KT   A YLALQ   D  ++V I
Sbjct  957   KT---AFYLALQRLMDENMDVII  976


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  621  LLSLSFD  601
            LLSLSF+
Sbjct  205  LLSLSFN  211


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 18/29 (62%)
 Frame = -2

Query  7626  RDLLL---QLAFQGTAVVQMSFPEQPQIP  7549
             R+LLL   QL               PQIP
Sbjct  128   RELLLEDNQL---------------PQIP  141


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1109  YWDRWII  1089
             YWD W I
Sbjct  853   YWDVWFI  859


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  2393  TLRDVVFLIE  2364
             TLR+VV L E
Sbjct  1017  TLRNVV-LTE  1025


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8081  LRDLLL  8098
             LR+LLL
Sbjct  127   LRELLL  132


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1514  ETLNNLSL  1491
             ETL NL L
Sbjct  198   ETLTNLEL  205


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  4194  EFPTIPKVK  4220
             EF  IP VK
Sbjct  525   EFSAIPHVK  533


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  57   PLLKPQ  74
            PL KPQ
Sbjct  473  PLIKPQ  478


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9142  PLLKPQ  9159
             PL KPQ
Sbjct  473   PLIKPQ  478


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1625  LSLSTIF  1605
             LSL  IF
Sbjct  488   LSLNSIF  494


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8317  LSYSSRY  8297
             LSY S Y
Sbjct  561   LSYNSHY  567


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4812  ERDW  4823
             ERDW
Sbjct  919   ERDW  922


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4316  FIHNF  4330
             FI+NF
Sbjct  579   FIQNF  583


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3684  FSFFI  3670
             F FFI
Sbjct  834   FTFFI  838


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2955  LVPLRSLH  2932
             L  LR LH
Sbjct  366   LLSLRALH  373


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2891  NSISPL  2874
             N ISPL
Sbjct  428   NRISPL  433


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3982  RKSYPGSSS  4008
             R SY  SSS
Sbjct  438   RQSYANSSS  446


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4963  PNKAFL  4946
             PN AFL
Sbjct  655   PNEAFL  660


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8361  KSSVIGWP  8384
             KSS+  WP
Sbjct  998   KSSILQWP  1005


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  137  EIPQT  151
            E+PQT
Sbjct  56   EVPQT  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1514  ETLNNLSLV  1488
             E L  LSL+
Sbjct  146   ESLTELSLI  154


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1797  SLRSLF  1814
             SLR LF
Sbjct  223   SLRKLF  228


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -2

Query  2862  SLTVQLSFSG  2833
             SL V+L FSG
Sbjct  609   SL-VELVFSG  617


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8    LVRPDLSL  31
            L R DLSL
Sbjct  641  LTRLDLSL  648


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  9093  LVRPDLSL  9116
             L R DLSL
Sbjct  641   LTRLDLSL  648


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -2

Query  4260  IIFFNSLFIDSTT  4222
             I FF   FI  TT
Sbjct  830   ILFFFTFFI--TT  840


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5039  SINNTKK  5059
             SIN  KK
Sbjct  935   SINQSKK  941


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2825  IVLPEKDS  2848
             +VL E DS
Sbjct  1021  VVLTENDS  1028


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4542  SLLSCI  4525
             S+L CI
Sbjct  9     SMLTCI  14


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1763  LLLRGSC  1743
             LL  GSC
Sbjct  16    LLISGSC  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7415  VQQQN  7429
             VQ+QN
Sbjct  100   VQHQN  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  335  LSPSSLR  315
            LS  SLR
Sbjct  294  LSSTSLR  300


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  6196  TI--GISIILQI  6167
             TI  GI  I QI
Sbjct  398   TINLGINFIKQI  409


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  6797  KQIASKLREQFGN  6835
             KQI  KL + F N
Sbjct  407   KQIDFKLFQNFSN  419


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4278  RLNIL  4292
             RL+IL
Sbjct  619   RLDIL  623


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8081  LRDLLLIVTRI  8113
             LR LLL   RI
Sbjct  714   LRTLLLSHNRI  724


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4370  RIVDII  4387
             R VD+I
Sbjct  797   RLVDVI  802


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4908  HLYYFD  4925
             HL+Y D
Sbjct  850   HLFYWD  855


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6220  ERRDKKLL  6243
             E RDK  L
Sbjct  907   ESRDKNVL  914


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 7/14 (50%)
 Frame = +3

Query  3249  RLLNL-------NC  3269
             RL NL       NC
Sbjct  168   RLINLKNLYLAWNC  181


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6519  PCVHC  6505
             PCV C
Sbjct  266   PCVPC  270


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  6601  EID-RSNYYLF  6572
             E D  SN+Y F
Sbjct  460   EFDPHSNFYHF  470


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = -3

Query  3077  LLLSLLMGHN  3048
             LLLS    HN
Sbjct  717   LLLS----HN  722


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1290  LSSNFL  1273
             LSSN L
Sbjct  743   LSSNLL  748


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2767  FFLMFFV  2747
             FF  FF+
Sbjct  832   FFFTFFI  838


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5470  SNTFYN  5453
             S TFY+
Sbjct  876   SQTFYD  881


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3368  LWYQLE  3385
             L Y+LE
Sbjct  901   LRYHLE  906


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3083  VFLLLS  3066
             +FLL S
Sbjct  14    IFLLIS  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2026  SRTYTC  2043
             SR Y C
Sbjct  31    SRSYPC  36


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7485  PQTV  7474
             PQTV
Sbjct  58    PQTV  61


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1305  QNANP  1319
             QN NP
Sbjct  103   QNGNP  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8302  RYVANSSTS  8276
             RY   SSTS
Sbjct  290   RYLNLSSTS  298


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2194  ISRN  2205
             ISRN
Sbjct  359   ISRN  362


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8545  FQSHLR  8562
             FQ H R
Sbjct  447   FQRHIR  452


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8711  LAELH  8725
             L ELH
Sbjct  666   LTELH  670


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 15/27 (55%)
 Frame = -1

Query  3742  IYLFIS-----------SNSFVCWYPC  3695
             I+L IS           S S    YPC
Sbjct  14    IFLLISGSCELCAEENFSRS----YPC  36


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8782  QLSQI  8796
             QL QI
Sbjct  136   QLPQI  140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6684  KESVSR  6701
             KE +SR
Sbjct  163   KEGISR  168


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5722  IDRLID  5739
             I RLI+
Sbjct  166   ISRLIN  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 3/5 (60%), Gaps = 0/5 (0%)
 Frame = +3

Query  7536  INSSW  7550
             IN  W
Sbjct  302   INAAW  306


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7527  YLSTARI  7507
             YLS  RI
Sbjct  424   YLSENRI  430


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  2171  LTEEKIKALV  2200
             L E  I  LV
Sbjct  425   LSENRISPLV  434


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  138  SSYQSH-----TTD  112
            SS+Q H      TD
Sbjct  445  SSFQRHIRKRRSTD  458


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1089  LSSILFV  1069
             L SI F+
Sbjct  490   LNSIFFI  496


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  400  LNRIF  386
            LN IF
Sbjct  490  LNSIF  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7673  INNYTSL  7693
             I N+T L
Sbjct  580   IQNFTNL  586


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2189  KALVE  2203
             K LVE
Sbjct  608   KSLVE  612


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4118  TDNGSNFT  4141
             TD  S+FT
Sbjct  704   TDSLSDFT  711


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  940  FNICMA  923
            +N+C+A
Sbjct  860  YNVCLA  865


>ref|NP_443069.1|  secretory carrier-associated membrane protein 3 isoform 2 [Homo 
sapiens]
Length=321

 GENE ID: 10067 SCAMP3 | secretory carrier membrane protein 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.5 bits (55),  Expect =    39
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3718  SFVCWY  3701
             SFVCWY
Sbjct  187   SFVCWY  192


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  4489  WSFPKWISA--VP  4457
             W F  WISA  VP
Sbjct  231   WGFSGWISALVVP  243


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6472  WNRTMYK  6492
             W R MYK
Sbjct  191   WYRPMYK  197


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2767  FFLMFFV  2747
             FF  FFV
Sbjct  210   FFFIFFV  216


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  369  ELDRWE  386
            ELDR E
Sbjct  86   ELDRRE  91


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7136  RDGGN  7150
             RDGGN
Sbjct  5     RDGGN  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6843  VLLFPNCS  6820
             VLLF  CS
Sbjct  180   VLLFTPCS  187


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7525  IPKGSTA  7545
             +PKG TA
Sbjct  242   VPKGNTA  248


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = +2

Query  7844  LVGLRIVF---AVLSIV  7885
             LV L   F   AVL IV
Sbjct  255   LVAL--LFTGIAVLGIV  269


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5499  FCYETN  5482
             FC ETN
Sbjct  163   FCVETN  168


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4854  SILW  4843
             SILW
Sbjct  176   SILW  179


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3049  IHSMY  3035
             IHS+Y
Sbjct  274   IHSLY  278


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4929  FSDSAIRKA  4955
             FS+ A+R A
Sbjct  297   FSNPAVRTA  305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8332  NPFQ  8321
             NPFQ
Sbjct  19    NPFQ  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8892  STLTLL  8875
             STL LL
Sbjct  148   STLALL  153


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  576  TVATLY  593
            TV T+Y
Sbjct  137  TVSTMY  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2767  FFLMFFV  2747
             FF  FF+
Sbjct  207   FFVFFFI  213


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7797  VMLNQFHKL  7771
             VML   H L
Sbjct  269   VMLKRIHSL  277


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4866  YSTQ  4877
             YSTQ
Sbjct  60    YSTQ  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5856  LQIINIP  5836
             LQ I IP
Sbjct  223   LQAIGIP  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 13/27 (48%)
 Frame = -2

Query  2142  IPGFNFTG------------TVSIGLM  2098
             IPG  F G             VS+ LM
Sbjct  228   IPGWGFSGWISALVVPKGNTAVSV-LM  253


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 7/22 (31%)
 Frame = +2

Query  6113  SLKPCVKLTPLCVSLKCTDLKN  6178
             SL P  KL P       T+ KN
Sbjct  42    SLQPSRKLSP-------TEPKN  56


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  5356  LDRGEQEME  5382
             LDR E E++
Sbjct  87    LDRRERELQ  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4353  PPIPPF  4336
             PP P F
Sbjct  110   PPLPSF  115


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = -2

Query  2004  CP------Q-ISMSI  1981
             CP      Q ISM I
Sbjct  116   CPVQPCFFQDISMEI  130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -2

Query  8829  W-CS---LLYWPLLSYLA  8788
             W CS   LL    L +LA
Sbjct  145   WMCSTLALL----LNFLA  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6462  LLLHF  6448
             LLL F
Sbjct  152   LLLNF  156


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  447  LPILYVLIY  421
            L IL VL +
Sbjct  175  LSILWVLLF  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3326  IPEWEF  3343
             IP W F
Sbjct  228   IPGWGF  233


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP P P P
Sbjct  31    APAPLPPP  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  34    PLPPP  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  6592  RS----NYYLFF  6569
             RS    N++ FF
Sbjct  200   RSDSSFNFFVFF  211


>ref|NP_001124382.1|  C-C chemokine receptor-like 2 isoform 2 [Homo sapiens]
Length=356

 GENE ID: 9034 CCRL2 | chemokine (C-C motif) receptor-like 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = -2

Query  8172  CRRFHQYLRASHPLRPR  8122
             CR FH  LR   PL PR
Sbjct  324   CRCFH--LRSNTPLQPR  338


 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = -3

Query  2420  VL-LLIFSFL------TLR  2385
             VL L IF FL      TLR
Sbjct  222   VLPLFIFTFLYVQMRKTLR  240


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1189  MSRMLVGLY  1163
             M   L+GLY
Sbjct  114   MCKILIGLY  122


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7511  LAVERYL  7531
             L V+RYL
Sbjct  136   LTVQRYL  142


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  3183  LVWAPLILAYF  3151
             L WAP   A+F
Sbjct  261   LMWAPYNIAFF  271


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3548  LDKLLV  3531
             LD LLV
Sbjct  66    LDNLLV  71


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9000  SPQRKVPC  8977
             S  R VPC
Sbjct  152   SARRRVPC  159


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4581  LMIFAFL  4561
             L IF FL
Sbjct  225   LFIFTFL  231


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +2

Query  4646  ME----K--FSKTPY  4672
             ME    K  FS TP+
Sbjct  186   MEDQKYKCAFSRTPF  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = -2

Query  3189  TS-LVWAPLILAYFPVF  3142
             TS L W   ILA  P F
Sbjct  163   TSVLAWVTAILATLPEF  179


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5388  YWLHFL  5371
             +W HFL
Sbjct  207   FWKHFL  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8893  LHSNTSL  8873
             L SNT L
Sbjct  329   LRSNTPL  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8942  GVLQELL  8962
             GVL  LL
Sbjct  64    GVLDNLL  70


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4254  FFNSL  4240
             FFN L
Sbjct  131   FFNCL  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  823  AFSSTTF  803
            AFS T F
Sbjct  194  AFSRTPF  200


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  522  QLQPSL  539
            QL PSL
Sbjct  51   QLVPSL  56


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6492  MSAQYNV  6512
             M A YN+
Sbjct  262   MWAPYNI  268


>pdb|3BZF|A  Chain A, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|3BZF|C  Chain C, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             WME      WDRE
Sbjct  51    WMEQEGSEYWDRE  63


 Score = 21.8 bits (44),  Expect =   981
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +1

Query  184  AP--EQGPE-SE---RETRGALSTQDSA  249
            AP  EQ  E SE   RETR   S  D A
Sbjct  49   APWMEQ--EGSEYWDRETR---SARDTA  71


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  992  MHWMH  978
            ++WMH
Sbjct  95   LQWMH  99


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  126   LNEDLRSWTA  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  11    SVSRPGRGE  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  22    FISVGY  27


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GY QF
Sbjct  112   GYEQF  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  19    EPRFISVGY  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  22    FISVGYVD  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


>pdb|3CDG|A  Chain A, Human Cd94NKG2A IN COMPLEX WITH HLA-E
 pdb|3CDG|C  Chain C, Human Cd94NKG2A IN COMPLEX WITH HLA-E
 pdb|3BZE|A  Chain A, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|3BZE|C  Chain C, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|3BZE|E  Chain E, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|3BZE|G  Chain G, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|3CII|A  Chain A, Structure Of Nkg2aCD94 BOUND TO HLA-E
 pdb|3CII|D  Chain D, Structure Of Nkg2aCD94 BOUND TO HLA-E
Length=273


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             WME      WDRE
Sbjct  50    WMEQEGSEYWDRE  62


 Score = 21.8 bits (44),  Expect =   981
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +1

Query  184  AP--EQGPE-SE---RETRGALSTQDSA  249
            AP  EQ  E SE   RETR   S  D A
Sbjct  48   APWMEQ--EGSEYWDRETR---SARDTA  70


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  992  MHWMH  978
            ++WMH
Sbjct  94   LQWMH  98


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  125   LNEDLRSWTA  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  10    SVSRPGRGE  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  21    FISVGY  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GY QF
Sbjct  111   GYEQF  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  254   QRYTCH  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  18    EPRFISVGY  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  21    FISVGYVD  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  85    NQSE  88


>ref|NP_055874.2|  talin-2 [Homo sapiens]
Length=2542

 GENE ID: 83660 TLN2 | talin 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +3

Query  1683  QSR--PEPTAPPEESFR  1727
             QS   PE T  PEES R
Sbjct  2162  QSKDVPEKTSSPEESIR  2178


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  3591  ESVTMFTSNPE  3559
             E  T F SNPE
Sbjct  1572  ENLTAFASNPE  1582


 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/24 (41%), Positives = 13/24 (54%), Gaps = 8/24 (33%)
 Frame = +3

Query  918   QAAMQMLKE-------TINEEAAE  968
             +AA Q++KE       T NE A E
Sbjct  1799  EAA-QLMKEAVDDIMVTLNEAASE  1821


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 14/27 (51%)
 Frame = +2

Query  6005  PNPQEVVLVNVTENFNMWKNDMVEQMH  6085
             P PQ+ V              MV QMH
Sbjct  472   PSPQQQV--------------MVGQMH  484


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +3

Query  1413  ARVLAEAMSQVTN  1451
             ARVLA+A S   N
Sbjct  829   ARVLAQATSDLVN  841


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  5382  ASRS*TRALEA  5414
             A R  TRALEA
Sbjct  2140  ATRG-TRALEA  2149


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 11/20 (55%)
 Frame = -1

Query  7153  AITTISC**QPCNI**TSNL  7094
             AITTIS           SNL
Sbjct  579   AITTIS-----------SNL  587


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -2

Query  7611  QLAFQGTAVVQM  7576
             +LAFQG    QM
Sbjct  1896  HLAFQG----QM  1903


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = -2

Query  5997  GTQACVAQTLCTSVS  5953
             GTQAC+  T  T VS
Sbjct  1975  GTQACI--TAATAVS  1987


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 12/32 (37%)
 Frame = +3

Query  3459  QDML-----LIEED-KKLSP*LTQQIRRLSYK  3536
             ++ML     L EE  KKL      QIR   YK
Sbjct  2506  EEMLKKEREL-EEARKKLA-----QIRQQQYK  2531


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7849  YQASYY  7832
             YQ SYY
Sbjct  376   YQESYY  381


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  157   SQCGKSLA  180
             SQC K LA
Sbjct  1023  SQCAKNLA  1030


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +1

Query  4912  CIT--LTVFQ  4935
             CI   LTVFQ
Sbjct  2153  CIKQELTVFQ  2162


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -2

Query  8268  TTSITLSVPSATAMAVA  8218
             T  IT+    ATA AVA
Sbjct  2180  TKGITM----ATAKAVA  2192


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 4/23 (17%)
 Frame = +2

Query  8192  KNSAVSLLNATAIAVAEGTDRVI  8260
             KN    LL A A AV E  +  I
Sbjct  1334  KN----LLAAAARAVTESINQLI  1352


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3037  TWSVL  3051
             TWSVL
Sbjct  1631  TWSVL  1635


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 15/39 (38%)
 Frame = +3

Query  8526  EEEEVGFPVTPQVPLRPMTYKAAV-DLSH---FLKEKGG  8630
             E EE+GF    Q+  R       V DL H   FL +K G
Sbjct  1909  EPEEIGF----QIRTR-------VQDLGHGCIFLVQKAG  1936


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3327  IQVACQ  3310
             IQ ACQ
Sbjct  1476  IQMACQ  1481


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  8152  ILVESPTVLES  8184
             ILV   T LES
Sbjct  1601  ILVSAKTMLES  1611


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  6002  DPNPQEVVLVN  6034
             DP  Q VVL+N
Sbjct  2074  DPETQ-VVLIN  2083


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = -2

Query  7881  IESTAKTI--LKP-TKP  7840
             IE  AK    LKP  KP
Sbjct  2317  IEAAAKKLEQLKPRAKP  2333


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8276  ACRAIR  8293
             ACR IR
Sbjct  30    ACRVIR  35


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  4046  AETGQETAY--FL  4078
             A+TGQ   Y  FL
Sbjct  41    AQTGQASDYGLFL  53


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = +1

Query  5692  EYRKILRQRKIDRLID  5739
             EY K  R  KI R+ D
Sbjct  82    EYKKKQRPQKI-RMLD  96


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  4699  GFIDITMK  4722
             G+IDI +K
Sbjct  397   GYIDIILK  404


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  1880  ADDTVLE  1900
             A+DTVL+
Sbjct  696   AEDTVLQ  702


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  903   TVGGHQAAMQM  935
             TV  + AAMQ+
Sbjct  1012  TVSDQAAAMQL  1022


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/32 (34%), Positives = 12/32 (37%), Gaps = 18/32 (56%)
 Frame = -2

Query  5298  CRI----LIMA--------------STPAQVS  5257
             CRI    LI A              S PAQ+S
Sbjct  1560  CRIATAPLIEAVENLTAFASNPEFVSIPAQIS  1591


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8948  LQELLTS  8968
             LQE LTS
Sbjct  1700  LQEQLTS  1706


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  6660  QDPTTIQEKE  6689
             +DPT I E E
Sbjct  2300  EDPTVIAETE  2309


 Score = 18.0 bits (35),  Expect(2) =  6468
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1526  FATIETLN  1503
             FAT  TLN
Sbjct  1999  FATAGTLN  2006


 Score = 15.5 bits (29),  Expect(2) =  6468
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1634  KISLSLS  1614
             K+SL LS
Sbjct  1961  KVSLVLS  1967


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5340  SRIGVT  5357
             SRIG+T
Sbjct  119   SRIGIT  124


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  753  GQMVHQA  773
            G+MV QA
Sbjct  823  GEMVRQA  829


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7499  QARILA  7516
             QAR+LA
Sbjct  828   QARVLA  833


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4917  YFDC  4928
             YFDC
Sbjct  1391  YFDC  1394


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = -2

Query  6417  CMGIGSKDTFGQA-CVMTE  6364
             C GI SK     A C +TE
Sbjct  1427  CVGIASK-----ALCGLTE  1440


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1425  AEAMS  1439
             AEAMS
Sbjct  1833  AEAMS  1837


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3885  TISFATTG  3862
             TI FAT G
Sbjct  1996  TIMFATAG  2003


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1368  EMMTAC  1385
             +M+TAC
Sbjct  2215  DMLTAC  2220


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3041  HVLVLLE  3021
             HVLV L+
Sbjct  2254  HVLVILQ  2260


 Score = 16.8 bits (32),  Expect(2) =  7723
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1381  AVIISS  1364
             A IISS
Sbjct  987   ALIISS  992


 Score = 16.3 bits (31),  Expect(2) =  7723
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  1287  SS-NFLPP  1267
             SS NFL P
Sbjct  991   SSQNFLQP  998


 Score = 16.8 bits (32),  Expect(2) =  7724
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  810   VEEKAFSPE  836
             V EK  SPE
Sbjct  2166  VPEKTSSPE  2174


 Score = 16.3 bits (31),  Expect(2) =  7724
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  801   VKVVEEKA  824
             VK VE+ A
Sbjct  2133  VKAVEDEA  2140


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5967  IMFGPH  5984
             I FGPH
Sbjct  247   IQFGPH  252


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7451  AQQHLLQ  7471
             AQQ+L Q
Sbjct  950   AQQQLVQ  956


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  8853  HGMDDPEREVLE  8888
             H M D  R+V+E
Sbjct  1151  HAMLDSARDVME  1162


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5549  LIRTVR  5566
             LIRT R
Sbjct  1615  LIRTAR  1620


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  6257  TSIRGKV--QKE  6286
             TSIR K   Q E
Sbjct  1651  TSIRDKAPGQRE  1662


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3171  PLILA  3157
             PLILA
Sbjct  1742  PLILA  1746


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3992  ILVAVHVAS  4018
             IL AV VAS
Sbjct  1744  ILAAVGVAS  1752


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  2301  LNGEN**ISENLI--RE--LKT  2354
             LN EN   SE     RE  LKT
Sbjct  2005  LNAEN---SETFADHRENILKT  2023


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  8219  ATAIAVAEG  8245
             ATA AVA G
Sbjct  2186  ATAKAVAAG  2194


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8183  DSNTVGD  8163
             DS TVG+
Sbjct  106   DSKTVGE  112


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6349  QLIAG  6335
             QLIAG
Sbjct  393   QLIAG  397


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1437  SQVTNSATI  1463
             SQV   ATI
Sbjct  1491  SQVLSAATI  1499


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -2

Query  2229  PSF-SISVQIS  2200
             P F SI  QIS
Sbjct  1581  PEFVSIPAQIS  1591


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3194  QLTEAVQKI  3220
             QLT  VQ I
Sbjct  1703  QLTSVVQEI  1711


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  4272  EIRLNILRQQYK  4307
             +IR     QQYK
Sbjct  2524  QIR----QQQYK  2531


 Score = 16.3 bits (31),  Expect(2) = 15094
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4722  FHSDV  4708
             FH DV
Sbjct  2225  FHPDV  2229


 Score = 15.1 bits (28),  Expect(2) = 15094
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4703  KPSPSF  4686
             KP P F
Sbjct  2261  KPTPEF  2266


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1915  RKME  1926
             RKME
Sbjct  158   RKME  161


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 6/24 (25%)
 Frame = +2

Query  2018  TVLVGPTPVNIIGR---NLLTQIG  2080
             TVL   T    IG    +LL QIG
Sbjct  639   TVL---TAAGSIGQASGDLLRQIG  659


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  746  VLHYRVI  726
            VL+ RVI
Sbjct  700  VLQNRVI  706


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1435  IASAKT  1418
             IAS KT
Sbjct  1513  IASSKT  1518


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9125  ESSQAQ  9108
             E SQAQ
Sbjct  1593  EGSQAQ  1598


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  40    ESSQAQ  23
             E SQAQ
Sbjct  1593  EGSQAQ  1598


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2945  RGTKAL  2962
             RGT AL
Sbjct  2142  RGTRAL  2147


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1438  LIASAK  1421
             LI SAK
Sbjct  2425  LISSAK  2430


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  952   MRKLQ  966
             MR LQ
Sbjct  2454  MRRLQ  2458


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5400  RALEASRK  5423
             R LE  RK
Sbjct  2513  RELEEARK  2520


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6253  QHKHK  6267
             +HKHK
Sbjct  254   EHKHK  258


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  382  HRSNSPPL  359
            HR   PPL
Sbjct  484  HRGHMPPL  491


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8711  LAELHT  8728
             LAEL T
Sbjct  1033  LAELRT  1038


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +3

Query  1419  VLAEAM---SQ  1442
             VL E M   SQ
Sbjct  1404  VLGESMAGISQ  1414


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = -3

Query  8180  SNTVGDS-----TNI  8151
             S TV DS     T I
Sbjct  1639  SHTVSDSIKSLITSI  1653


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  750   QGQM  761
             QGQM
Sbjct  1900  QGQM  1903


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8790  AQLVLAC  8770
             AQL  AC
Sbjct  2437  AQLLVAC  2443


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2325  SENLIR  2342
             S+NL+R
Sbjct  2468  SDNLVR  2473


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3589  LTICIR  3606
             L IC+R
Sbjct  6     LKICVR  11


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = +1

Query  5317  FSELGVDIAE*ALL  5358
             F E GVD  E  LL
Sbjct  182   FREQGVDENE-TLL  194


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV LN L
Sbjct  211   PVQLNLL  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8652  QRRQDILD  8675
             Q R DIL+
Sbjct  220   QARDDILN  227


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5862  QKNCG  5876
             +KNCG
Sbjct  286   HKNCG  290


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5296  QNSYY  5282
             Q SYY
Sbjct  377   QESYY  381


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2662  YIQII  2648
             YI II
Sbjct  398   YIDII  402


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  4204  VGNS--KFLLDSRPP  4166
             +G S  K L DS PP
Sbjct  1218  IGESSKKLLVDSLPP  1232


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             +FLDA
Sbjct  1282  EFLDA  1286


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  169   KSLAVAP  189
             KSL V P
Sbjct  1322  KSLSVDP  1328


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3197  LTEAVQKIT  3223
             L EAV+  T
Sbjct  1567  LIEAVENLT  1575


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1310  ILDQQ  1296
             ILD+Q
Sbjct  1754  ILDHQ  1758


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7555  NPQEL  7541
             NP+EL
Sbjct  1879  NPEEL  1883


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  7427  NNLLRAIEAQ  7456
             +NL RA  AQ
Sbjct  2469  DNLVRA--AQ  2476


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8806  RPIKERTP  8829
             R I ER P
Sbjct  32    RVIRERVP  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2255  FQAQ  2244
             FQAQ
Sbjct  243   FQAQ  246


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4464  AEIHFG  4481
             A+I+FG
Sbjct  245   AQIQFG  250


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4287  ILRQQY  4304
             IL QQ+
Sbjct  434   ILQQQF  439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  7023  HGRVIVSLPSVL  6988
             HG V   LP V+
Sbjct  447   HGSV--ALPAVM  456


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3401  GAETFYV  3421
             G ETF V
Sbjct  462   GPETFNV  468


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8428  LSAAGS  8411
             L AAGS
Sbjct  641   LTAAGS  646


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3524  SSDLLCQLG  3498
             S DLL Q G
Sbjct  651   SGDLLRQIG  659


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +1

Query  6205  ENDNGERRDKKLLFQ  6249
             EN+  ER      FQ
Sbjct  660   ENETDER------FQ  668


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  921  AAMQMLK  941
            AAM  LK
Sbjct  682  AAMLVLK  688


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1438  LIASAKTLA  1412
             L A AK LA
Sbjct  859   LLAAAKLLA  867


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2940  SLHNC  2926
             SL NC
Sbjct  1197  SLNNC  1201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  280   AATGEYAKNFD  312
             AA G +  +FD
Sbjct  1271  AASGKFSDDFD  1281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3411  VSAPTM  3394
             VSA TM
Sbjct  1603  VSAKTM  1608


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1062  LQEQ  1073
             LQEQ
Sbjct  1700  LQEQ  1703


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  8805  LLSYLAQLVLA  8773
             L SY   L+LA
Sbjct  1736  LASYFEPLILA  1746


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9062  LYAGSEG  9042
             LYA  EG
Sbjct  1778  LYAAKEG  1784


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  627   KEALDKI  647
             KEA D I
Sbjct  1805  KEAVDDI  1811


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218   PEEL  229
             PEEL
Sbjct  1880  PEEL  1883


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  6974  TEGSNNTEGSDT  7009
             T G  N E S+T
Sbjct  2001  TAGTLNAENSET  2012


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = +3

Query  1242  TLRAEQASQEVKNWMTETLL  1301
             T R EQ   E  N   ETLL
Sbjct  181   TFR-EQGVDE--N---ETLL  194


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  405  LALTEFFP  382
            L L EF P
Sbjct  262  LDLKEFLP  269


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6423  VPRL  6434
             VPRL
Sbjct  329   VPRL  332


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  1814  WQRPLVTIK  1840
             W  PL T+K
Sbjct  354   W--PLTTVK  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  1594  DTK*KIVLRDRLI  1632
             DT    VL +R I
Sbjct  698   DT----VLQNRVI  706


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  937   NICMA  923
             NI MA
Sbjct  1309  NISMA  1313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4358  CTPQSP  4341
             CT Q P
Sbjct  1355  CTQQAP  1360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1821  DPSSQ  1835
             DP SQ
Sbjct  1453  DPNSQ  1457


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6002  DPNPQ  6016
             DPN Q
Sbjct  1453  DPNSQ  1457


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3538  NLSSFA  3555
             NL  FA
Sbjct  1573  NLTAFA  1578


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8218  IEQA  8207
             IEQA
Sbjct  1677  IEQA  1680


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4530  CITTA  4516
             CIT A
Sbjct  1979  CITAA  1983


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6620  IIVQLNTSV  6646
             II  L+T +
Sbjct  1989  IIADLDTTI  1997


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6597  LTDLI  6583
             L DLI
Sbjct  2092  LSDLI  2096


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  725   LADLI  711
             L DLI
Sbjct  2092  LSDLI  2096


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4945  IAESE  4931
             IAE E
Sbjct  2305  IAETE  2309


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2261  MDFQAQFL  2238
             +DF+ Q L
Sbjct  2340  LDFEEQIL  2347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             D EE+I
Sbjct  2341  DFEEQI  2346


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1041  IAGTTSTL  1064
             IA  TS L
Sbjct  2353  IAAATSAL  2360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9064  QLLFAC  9081
             QLL AC
Sbjct  2438  QLLVAC  2443


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6113  SLKPCV  6130
             SLK CV
Sbjct  5     SLKICV  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8006  IRLVNGS  8026
             IR+ +GS
Sbjct  92    IRMLDGS  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  942  ETINE  956
            ETI E
Sbjct  134  ETIEE  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  52   GTHCLSLNKAC  84
            G H  S  KAC
Sbjct  228  GSHPVSFEKAC  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  9137  GTHCLSLNKAC  9169
             G H  S  KAC
Sbjct  228   GSHPVSFEKAC  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  2136  QEW  2144
             QEW
Sbjct  352   QEW  354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  924  AMQMLKETIN  953
            A Q L  TIN
Sbjct  494  AQQALMGTIN  503


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4389  AIMSTI  4372
             A M TI
Sbjct  497   ALMGTI  502


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2637  INTWM  2651
             INT M
Sbjct  502   INTSM  506


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6365  SVITQA  6382
             SV+ QA
Sbjct  775   SVVSQA  780


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5219  LHGLGQHI  5242
             LH L QH+
Sbjct  781   LHDLLQHV  788


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7424  AAALYQTI  7401
             AAA  QTI
Sbjct  928   AAAATQTI  935


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5308  QQLLQ  5294
             QQL Q
Sbjct  952   QQLVQ  956


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  8978  VASSMSAVL  8952
             V SSM   L
Sbjct  1100  VGSSMAQLL  1108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3468  LLIEEDK  3488
             +LI+E K
Sbjct  1166  MLIQEAK  1172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5770  NESEGEI  5790
             N+S GE+
Sbjct  1252  NQSAGEV  1258


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3659  IEQLI  3673
             I QLI
Sbjct  1348  INQLI  1352


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4125  MAAIS  4139
             MA IS
Sbjct  1409  MAGIS  1413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5277  STPAQV  5260
             S P QV
Sbjct  1488  SSPSQV  1493


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6613  SIVREI  6596
             S+V EI
Sbjct  1706  SVVQEI  1711


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5810  PISTSA  5793
             PI T A
Sbjct  1717  PIATAA  1722


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 6/16 (37%)
 Frame = +1

Query  1510  VSIV------AKKGTQ  1539
             VS V        KGTQ
Sbjct  1962  VSLVLSALQAGNKGTQ  1977


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7287  TTLLFA  7270
             TT +FA
Sbjct  1995  TTIMFA  2000


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7112  NITGLL  7129
             N+T LL
Sbjct  2125  NVTSLL  2130


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3573  TSNPE  3559
             TS PE
Sbjct  2170  TSSPE  2174


>pdb|2JOG|A  Chain A, Structure Of The Calcineurin-Nfat Complex
Length=327


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 3/15 (20%)
 Frame = +2

Query  7421  QQNNL---LRAIEAQ  7456
             Q+NNL   LRA EAQ
Sbjct  250   QHNNLLSILRAHEAQ  264


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 8/21 (38%)
 Frame = +2

Query  6782  WNNTLKQIASKLREQFGNNKT  6844
             W + L        E FGN KT
Sbjct  212   WSDPL--------EDFGNEKT  224


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4876  CVLYL  4862
             CVLYL
Sbjct  109   CVLYL  113


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3722  QFLCV  3708
             QFLCV
Sbjct  174   QFLCV  178


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5865  SVALQII  5845
             SVAL II
Sbjct  39    SVALRII  45


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  7828  NDSRRLGRFK  7857
             +D R L RFK
Sbjct  190   DDIRKLDRFK  199


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -3

Query  4652  FPCSNPHPVYLP  4617
             F CS PHP  LP
Sbjct  314   FNCS-PHPYWLP  324


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +2

Query  2834  PEKDSWTVNDIQKL  2875
             PE +  T +DI KL
Sbjct  184   PEIN--TLDDIRKL  195


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  3456  FPNLVSLLAAP  3424
             FP L+    AP
Sbjct  279   FPSLITIFSAP  289


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  164   CLPLAAL  170


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 12/34 (35%), Positives = 12/34 (35%), Gaps = 18/34 (52%)
 Frame = +1

Query  5716  RKIDRL-----------I---DRLIERAEDSGNE  5775
             RK DR            I   D L    ED GNE
Sbjct  193   RKLDRFKEPPAYGPMCDILWSDPL----EDFGNE  222


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4287  ILRQQ  4301
             ILRQ+
Sbjct  51    ILRQE  55


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7847  VGLRIV  7864
             V LRI+
Sbjct  40    VALRII  45


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7882  YRKYSK  7865
             YR Y K
Sbjct  268   YRMYRK  273


>ref|NP_955452.3|  DNA polymerase theta [Homo sapiens]
Length=2590

 GENE ID: 10721 POLQ | polymerase (DNA directed), theta [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 3/13 (23%)
 Frame = +1

Query  5722  IDR---LIDRLIE  5751
             I+R   LI+RLIE
Sbjct  191   IERANGLINRLIE  203


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  5797  LVEMGVE  5817
             LVEMGV+
Sbjct  891   LVEMGVQ  897


 Score = 20.2 bits (40),  Expect(2) =   501
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3754  CWNQESTIF  3780
             C N ES IF
Sbjct  1550  CSNDESIIF  1558


 Score = 18.9 bits (37),  Expect(2) =   501
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3662  EQLIKKEKV  3688
             E LIKK  V
Sbjct  1530  EDLIKKSNV  1538


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 8/20 (40%)
 Frame = +3

Query  8835  LHPVSLHGMDDPEREVLEWR  8894
             LHP  L G+      +LEWR
Sbjct  2190  LHP--LPGL------ILEWR  2201


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  6971  STEGSNNTEG  7000
             STE S+ TEG
Sbjct  597   STEASDGTEG  606


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 12/24 (50%)
 Frame = +3

Query  1284  MTETLLVQNANPDCK------TIL  1337
             MTET  V N    CK      TIL
Sbjct  2427  MTET--VKN----CKRDGFVQTIL  2444


 Score = 21.8 bits (44),  Expect =   981
 Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 23/41 (56%)
 Frame = +1

Query  3091  GARPMDISNLS------RAI*KSENRK----------ICKN  3165
             G RP+DI  L       RA      RK          ICKN
Sbjct  465   GGRPLDI--LTYKQMVGRA-----GRKGVDTVGESILICKN  498


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +3

Query  2256  IHTILQYLP*RK  2291
             IH I QYL  RK
Sbjct  1189  IHPINQYL--RK  1198


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7636  NLFQRFI  7616
             NLFQ FI
Sbjct  1835  NLFQTFI  1841


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6023  LLLVGWGL  6000
             LLL  WGL
Sbjct  69    LLLANWGL  76


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  6227  EIK-NCSFNI  6253
             +IK NCS NI
Sbjct  1117  QIKQNCSWNI  1126


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  7151  SNNESEIF  7174
             SN+ES IF
Sbjct  1551  SNDESIIF  1558


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  8312  RQGLERIL  8335
             RQGL R+L
Sbjct  433   RQGLIRVL  440


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8204  VSLLNA  8221
             VSLLNA
Sbjct  799   VSLLNA  804


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  8778  VPVEPDKIEE  8807
             V VE +KI E
Sbjct  1161  VAVEAEKINE  1170


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3471  LIEEDK  3488
             LIEE+K
Sbjct  201   LIEENK  206


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = +3

Query  8796  KIE--E--ANKGENTSLL  8837
             KIE  E  AN  E  SLL
Sbjct  1704  KIEMLENNANHDETSSLL  1721


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5813  TPISTSA  5793
             TPI TSA
Sbjct  1738  TPIPTSA  1744


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = +1

Query  3067  LNSRNTEAGARPMD-----ISNL  3120
             LN  NTE     ++     ISNL
Sbjct  1668  LNRKNTE-----LNEEQEVISNL  1685


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  7493  QLQARILA  7516
             QL+ RILA
Sbjct  2333  QLELRILA  2340


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +3

Query  6471  MEQDHVQMSAQYN  6509
             ++QD V+M  Q N
Sbjct  887   LQQDLVEMGVQWN  899


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  4355  TPQSPLF  4335
             TP+SP F
Sbjct  1411  TPESPIF  1417


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 14/36 (38%)
 Frame = +3

Query  4860  KRYSTQVD------PE----LADQLIHLYYFDCFSD  4937
             KR  T V+      PE    + D L     FD FSD
Sbjct  1465  KRTPTGVEGECLPVPETSLNMSDSLL----FDSFSD  1496


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 9/27 (33%)
 Frame = +3

Query  483   LLE---TSEGCRQILGQLQPSLQTGSE  554
             LLE   TS+G  Q LG     L  GSE
Sbjct  2019  LLEGMETSQG-IQSLG-----LNAGSE  2039


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6566  AEEEVV  6583
             AEE+VV
Sbjct  2547  AEEDVV  2552


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  7964  LRACRVPSGL  7935
             LR  R PSGL
Sbjct  394   LR--RLPSGL  401


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1612  QSFIW  1598
             +SFIW
Sbjct  1627  HSFIW  1631


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -1

Query  430   FNLYFFFPPGLNRI  389
             F+L     PGL RI
Sbjct  1636  FDL----SPGLQRI  1645


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8318  GLERIL  8335
             GL+RIL
Sbjct  1641  GLQRIL  1646


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6540  VDTTGLIP  6517
             VD  GLIP
Sbjct  1729  VDDNGLIP  1736


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7724  GFAILQL  7704
             GF ILQL
Sbjct  2532  GFFILQL  2538


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4814  KRLAFG  4831
             KRL FG
Sbjct  783   KRLTFG  788


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  2912  GIKVRQLCKLLR  2947
             GI  R+LC L R
Sbjct  788   GIQ-RELCDLVR  798


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6820  RTIW  6831
             RTIW
Sbjct  860   RTIW  863


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6466  VQWN  6477
             VQWN
Sbjct  896   VQWN  899


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2423  PVLLLI  2406
             PV LLI
Sbjct  1457  PVILLI  1462


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1122  YKFLLL  1105
             YK LLL
Sbjct  1971  YKILLL  1976


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  1565  KGLLEMWKGR  1594
             KGLL M  GR
Sbjct  2275  KGLLPM--GR  2282


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  4971  VSPRCEYQA  4997
             V PRC  QA
Sbjct  2291  VNPRC--QA  2297


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1868  LDTGAD  1885
             L+TGAD
Sbjct  2352  LNTGAD  2357


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8812  IKERTPACY  8838
             IKE   ACY
Sbjct  2404  IKENDAACY  2412


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -1

Query  6943  KQLC*ITVEKFPSTIK  6896
             KQL     E F ST K
Sbjct  2490  KQL-----ETFHSTFK  2500


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  8720  VLL--IREVAL  8694
             VLL  I EV L
Sbjct  724   VLLDLISEVPL  734


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/54 (25%), Positives = 15/54 (27%), Gaps = 20/54 (37%)
 Frame = -1

Query  388   FSHRSNSPPLNTDalapislllasaSQNF--W-------RTHQSPPL---ASCR  263
             FS+     PLN              S  F  W       R   S PL     CR
Sbjct  1019  FSQKTKKAPLN--------FNSEKMSRSFRSWKRRKHLKRSRDSSPLKDSGACR  1064


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  341   CESVS--IKR  364
             CE VS  I R
Sbjct  1220  CEAVSSYINR  1229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  477   PGLLET  494
             PG LET
Sbjct  1750  PGILET  1755


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6486  VQMSAQY  6506
             V+M  QY
Sbjct  2076  VEMPSQY  2082


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +1

Query  8404  DELSQQ--QI  8427
             D+L QQ  QI
Sbjct  2376  DDLRQQAKQI  2385


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  409  PPGLNR  392
            PPGL R
Sbjct  42   PPGLGR  47


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  725  LADLIA  708
            LAD IA
Sbjct  353  LADIIA  358


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8452  WKNME  8466
             W NME
Sbjct  771   WHNME  775


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2498  INNETPG  2518
             IN E PG
Sbjct  996   INKEKPG  1002


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8898  QTSTLT  8881
             QTST T
Sbjct  1203  QTSTIT  1208


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7027  NKTNYKHVAE  7056
             NKT   HV +
Sbjct  1301  NKTKNNHVSD  1310


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/27 (29%), Positives = 9/27 (33%), Gaps = 15/27 (55%)
 Frame = +3

Query  756   QMV---------------HQAISPRTL  791
             QMV               H  +SPR L
Sbjct  1565  QMVEALDNVDIFPVQEKNHTVVSPRAL  1591


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2360  PRSLEFS  2340
             PR LE S
Sbjct  1588  PRALELS  1594


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2286  RKKTVLNGE  2312
             RK T LN E
Sbjct  1670  RKNTELNEE  1678


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  2727  GGDLPHQTKNI  2759
             G DL +Q K I
Sbjct  2375  GDDLRQQAKQI  2385


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9038  ASPQIL  9055
             ASPQ L
Sbjct  29    ASPQFL  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8990  GKSLVA  8973
             GK LVA
Sbjct  120   GKTLVA  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1511  TLNNLSLV  1488
             TL NL LV
Sbjct  267   TLPNLELV  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  17   PDLSLGALWL  46
            P+L L A WL
Sbjct  269  PNLELVASWL  278


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  9102  PDLSLGALWL  9131
             P+L L A WL
Sbjct  269   PNLELVASWL  278


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8910  AFHH  8921
             AFHH
Sbjct  414   AFHH  417


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  837  VIPMF  851
            V PMF
Sbjct  654  VTPMF  658


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7794  MLNQFHK  7774
             +L QF+K
Sbjct  777   LLSQFQK  783


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3807  NMRNI  3821
             NMR I
Sbjct  858   NMRTI  862


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5121  SGACSI  5104
             SGAC I
Sbjct  1060  SGACRI  1065


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7618  ITPTSIP  7598
             I PT IP
Sbjct  1735  IPPTPIP  1741


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1974  YCLTL  1960
             YCL L
Sbjct  2082  YCLAL  2086


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 7/19 (36%)
 Frame = +2

Query  2213  EMEKEGKIS-------KIG  2248
             EME   K S       KIG
Sbjct  2561  EMESAVKLSVKLKVKVKIG  2579


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8224  CGIEQAN  8204
             C IE AN
Sbjct  189   CTIERAN  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  626  QGSFRQ  643
            +G FRQ
Sbjct  429  EGAFRQ  434


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1344  LGPAATLE  1367
             L PA TL+
Sbjct  623   LSPADTLD  630


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2478  LHLPYLV  2498
             LH  YLV
Sbjct  648   LHILYLV  654


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8526  EEEE  8537
             EEEE
Sbjct  848   EEEE  851


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  982  CTLSHSAASSL  950
            C L HS   SL
Sbjct  901  CALLHSSTCSL  911


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  3666  CSII*LTNSDS  3634
             CS   LT S+S
Sbjct  909   CS---LTHSES  916


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  982  CTLSHS  965
            C L HS
Sbjct  909  CSLTHS  914


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +1

Query  4414  TKTNYKN--SK  4440
             TK  YK   SK
Sbjct  927   TKSSYKKLTSK  937


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6474  EQDHVQM  6494
             E D VQM
Sbjct  1560  EMDSVQM  1566


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8526  EEEEV  8540
             EE+EV
Sbjct  1677  EEQEV  1681


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6002  DPNPQE  6019
             DP+ QE
Sbjct  1997  DPDSQE  2002


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/18 (33%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -1

Query  7504  CLELLD-------APDCE  7472
             CL LL+         +CE
Sbjct  2083  CLALLELNGIGFSTAECE  2100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2483  FTIPSINN  2506
             FT P I N
Sbjct  2244  FTEPNIQN  2251


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1574  LEMWK  1588
             LEM K
Sbjct  134   LEMRK  138


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3644  LVNQIIEQ  3667
             L+N  IE+
Sbjct  197   LINRLIEE  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2570  IFQSSM  2587
             I+ SSM
Sbjct  302   IYDSSM  307


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2453  RELKNMHH  2430
             RE  N+HH
Sbjct  359   REFYNLHH  366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2846  CLFLAA  2829
             C FLAA
Sbjct  556   CTFLAA  561


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6658  TINFYR  6641
             TI+ YR
Sbjct  663   TIDWYR  668


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2440  FFSSL  2454
             FF SL
Sbjct  719   FFTSL  723


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = +1

Query  5275  GSHNKN---SATTAVYPFSE  5325
             GS+ KN    AT  V   SE
Sbjct  1140  GSQSKNVTCQATSVV---SE  1156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6768  LVEQN  6782
             LV+QN
Sbjct  1358  LVQQN  1362


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4032  QKLFQ  4046
             Q LFQ
Sbjct  1834  QNLFQ  1838


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7444  SPQQI  7430
             SPQ+I
Sbjct  1879  SPQEI  1883


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -2

Query  2223  FSISVQISTNAFI  2185
             FSIS      AF+
Sbjct  2310  FSISMR---HAFV  2319


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  178   LEIFH  164
             LE FH
Sbjct  2492  LETFH  2496


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3729  FPPIPL  3712
             F P+PL
Sbjct  287   FRPVPL  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4060  GNSIF  4074
             GNSI+
Sbjct  299   GNSIY  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3513  QIRRL  3527
             Q RRL
Sbjct  393   QLRRL  397


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8177  NTVGDS  8160
             +TVG+S
Sbjct  487   DTVGES  492


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1167  SPTSILDI  1190
             SP   LDI
Sbjct  624   SPADTLDI  631


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1794  LKDTVP  1777
             LK+ VP
Sbjct  833   LKNAVP  838


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8523  QEEEEV  8540
             +EEE V
Sbjct  848   EEEEAV  853


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  7024  QNKTNYK  7044
             Q K  YK
Sbjct  926   QTKSSYK  932


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = +3

Query  4311  QY--------SSTILKEK  4340
             QY         STI K+K
Sbjct  1194  QYLRKQSHEQTSTITKQK  1211


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5360  TEESK  5374
             TEE K
Sbjct  1244  TEENK  1248


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4786  VITNL  4772
             VI NL
Sbjct  1681  VISNL  1685


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7415  LYQTII  7398
             L+QT I
Sbjct  1836  LFQTFI  1841


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8196  IVLLAC  8213
             I LL C
Sbjct  1973  ILLLSC  1978


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2187  IFSSVN  2170
             IF S N
Sbjct  2053  IFNSMN  2058


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6768  LVEQNGI  6788
             L E NGI
Sbjct  2086  LLELNGI  2092


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  608   DRDKRHQGS  634
             +R+   QGS
Sbjct  2146  NREMKNQGS  2154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5106  IYPLS  5092
             IYP S
Sbjct  2229  IYPVS  2233


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6393  YPLSQ  6407
             YP SQ
Sbjct  2230  YPVSQ  2234


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5999  TDPNPQEV  6022
             T+PN Q V
Sbjct  2245  TEPNIQNV  2252


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 15/28 (53%)
 Frame = +3

Query  4557  QEEKQ-----------RSLG----IMEN  4595
             Q+ KQ            SLG    I EN
Sbjct  2380  QQAKQICYGIIYGMGAKSLGEQMGIKEN  2407


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  955   RKLQ  966
             RKLQ
Sbjct  2520  RKLQ  2523


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = +2

Query  1754  SEAGADRQGTVSF  1792
             SE G D     SF
Sbjct  13    SESGSD-----SF  20


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5482  VCFIT  5496
             +C+IT
Sbjct  237   ICYIT  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8763  WCYKL  8777
             WC KL
Sbjct  349   WCEKL  353


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5516  MAGRSG  5533
             M GR G
Sbjct  477   MVGRAG  482


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9176  TQGKLY  9159
             T+GK Y
Sbjct  604   TEGKVY  609


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  91   TQGKLY  74
            T+GK Y
Sbjct  604  TEGKVY  609


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2614  FSKRL  2600
             FS RL
Sbjct  765   FSNRL  769


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6569  EEEVV  6583
             EEE V
Sbjct  849   EEEAV  853


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3629  QSESE  3643
             +SESE
Sbjct  913   HSESE  917


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4538  SDIKVV  4555
             SD KVV
Sbjct  1011  SDKKVV  1016


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5309  TAVVAE  5292
             T VV E
Sbjct  1151  TSVVSE  1156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5490  ETNLAM  5473
             ET L M
Sbjct  1480  ETSLNM  1485


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1850  QLKEAL  1867
             Q+KE L
Sbjct  1508  QMKEPL  1513


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6563  LAEEEVVI  6586
             L EE+ VI
Sbjct  1675  LNEEQEVI  1682


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1581  ISNSPFS  1561
             IS+  FS
Sbjct  1799  ISDTSFS  1805


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2223  FSIS  2212
             FSIS
Sbjct  1850  FSIS  1853


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7690  LNTLL  7704
             LN LL
Sbjct  2060  LNSLL  2064


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8151  LRASHPL  8131
             L A HPL
Sbjct  2187  LKALHPL  2193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4003  CYQDNF  3986
             CY D F
Sbjct  2411  CYIDSF  2416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2256  IHTILQ  2273
             I TI Q
Sbjct  2469  INTIVQ  2474


>ref|NP_001004310.2|  Fc receptor-like protein 6 precursor [Homo sapiens]
Length=434

 GENE ID: 343413 FCRL6 | Fc receptor-like 6 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/8 (87%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = -1

Query  511  CLQPSDVS  488
            CLQPS+VS
Sbjct  404  CLQPSEVS  411


 Score = 20.6 bits (41),  Expect(2) =  1208
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  146  EGSLVT  129
            EGSLVT
Sbjct  124  EGSLVT  129


 Score = 17.6 bits (34),  Expect(2) =  1208
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  247  PSPASRE  227
            PSP  RE
Sbjct  118  PSPEPRE  124


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  2209  YRDGK----GREN  2235
             YRDGK      EN
Sbjct  53    YRDGKFLHFSKEN  65


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8327  FPSPVL  8310
             FP PVL
Sbjct  109   FPPPVL  114


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  7807  VVYKIIHNDSRR  7842
             VVY ++H  S R
Sbjct  369   VVYSVVHRTSKR  380


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8452  WKNMEQSQV  8478
             WKN   SQV
Sbjct  42    WKNTPLSQV  50


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2541  FHRDGK  2558
             F RDGK
Sbjct  52    FYRDGK  57


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6501  VLTFVHGP  6478
             VLT  HGP
Sbjct  208   VLTLHHGP  215


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5215  LAPWLRA  5235
             L PWL A
Sbjct  308   LVPWLPA  314


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  8044  RSAEPVPLQLPP  8079
             R A P P Q PP
Sbjct  334   RKAGPLPSQIPP  345


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7816  YIPQ  7805
             YIPQ
Sbjct  89    YIPQ  92


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7925  SETIMV  7908
             SET MV
Sbjct  98    SETAMV  103


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  534  MVVAVPVFVY  505
            MV+A    VY
Sbjct  320  MVIAAALLVY  329


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1451  FSYHND  1468
             FS+H D
Sbjct  147   FSFHKD  152


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1255  SALRVL  1238
             SALR L
Sbjct  141   SALRLL  146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2541  FHRDG  2555
             FH DG
Sbjct  149   FHKDG  153


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8140  GSPQIL  8157
             GSP IL
Sbjct  233   GSPPIL  238


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  203  SGPCSGAT  180
            S PC G T
Sbjct  252  SAPCGGTT  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  377  SMGKNSVKARG  409
            SMG   V  RG
Sbjct  69   SMGAATVQSRG  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +1

Query  3361  SEI-MVPVRE  3387
             SE  MV V E
Sbjct  98    SETAMVQVQE  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7287  TTLLF  7273
             T LLF
Sbjct  259   TSLLF  263


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1677  FLQSRPEP  1700
             +LQ  P P
Sbjct  21    YLQAWPNP  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  4810  PVCRPQYVVIT  4778
             PV RP   V T
Sbjct  203   PVSRP---VLT  210


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4873  VLYLFFL  4853
             +LY F+L
Sbjct  237   ILYSFYL  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  130  VTRDPSDP  153
            V R+ S+P
Sbjct  282  VSRERSEP  289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  9038  PLPSPAQATPP  9006
             PLPS    T P
Sbjct  338   PLPSQIPPTAP  348


>ref|NP_001027581.1|  2'-5'-oligoadenylate synthase 1 isoform 3 [Homo sapiens]
Length=414

 GENE ID: 4938 OAS1 | 2',5'-oligoadenylate synthetase 1, 40/46kDa [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/12 (58%), Positives = 11/12 (91%), Gaps = 0/12 (0%)
 Frame = +2

Query  2195  LVEICTEMEKEG  2230
             L+E CT+++KEG
Sbjct  173   LIEECTDLQKEG  184


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3359  LVKLWYQ  3379
             LVK WYQ
Sbjct  211   LVKHWYQ  217


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +2

Query  5549  LIRTVRLIKLLYQSSK  5596
             LIR   L+K  YQ  K
Sbjct  208   LIR---LVKHWYQNCK  220


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6833  FQIVLLI  6813
             FQ+ LLI
Sbjct  388   FQVGLLI  394


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3423  MGQLTG  3440
             +GQLTG
Sbjct  156   LGQLTG  161


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 17/31 (54%)
 Frame = +3

Query  6858  NPQ-------EGT--QKL*RTVLIVEGNFST  6923
             NPQ       E T  QK        EG FST
Sbjct  166   NPQIYVKLIEECTDLQK--------EGEFST  188


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  3650  NQIIE-----QLIK  3676
             N IIE     QL K
Sbjct  280   NPIIEKYLRRQLTK  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6161  CTDL  6172
             CTDL
Sbjct  177   CTDL  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  2262  YGFSGPIFE  2236
             Y F  PI E
Sbjct  276   YDFKNPIIE  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3804  MNMRN  3818
             M++RN
Sbjct  2     MDLRN  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1111  EKFIKD  1128
             +KFI D
Sbjct  13    DKFIED  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -3

Query  2360  PRSLEFSY*VL  2328
             PR L F   VL
Sbjct  129   PRALSF---VL  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  801  VKVVEE  818
            VK +EE
Sbjct  171  VKLIEE  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6794  LKQIASKL  6817
             LKQ   KL
Sbjct  198   LKQRPTKL  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3215  FALPLLIV  3192
             +AL LL V
Sbjct  230   YALELLTV  237


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2552  WKGSP  2566
             W GSP
Sbjct  335   WDGSP  339


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5405  PGSIQ  5419
             PGSI+
Sbjct  351   PGSIH  355


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4003  CYQDNF  3986
             CY D F
Sbjct  380   CYLDQF  385


>ref|NP_058132.2|  2'-5'-oligoadenylate synthase 1 isoform 1 [Homo sapiens]
Length=400

 GENE ID: 4938 OAS1 | 2',5'-oligoadenylate synthetase 1, 40/46kDa [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/12 (58%), Positives = 11/12 (91%), Gaps = 0/12 (0%)
 Frame = +2

Query  2195  LVEICTEMEKEG  2230
             L+E CT+++KEG
Sbjct  173   LIEECTDLQKEG  184


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3359  LVKLWYQ  3379
             LVK WYQ
Sbjct  211   LVKHWYQ  217


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +2

Query  5549  LIRTVRLIKLLYQSSK  5596
             LIR   L+K  YQ  K
Sbjct  208   LIR---LVKHWYQNCK  220


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3423  MGQLTG  3440
             +GQLTG
Sbjct  156   LGQLTG  161


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 17/31 (54%)
 Frame = +3

Query  6858  NPQ-------EGT--QKL*RTVLIVEGNFST  6923
             NPQ       E T  QK        EG FST
Sbjct  166   NPQIYVKLIEECTDLQK--------EGEFST  188


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  3650  NQIIE-----QLIK  3676
             N IIE     QL K
Sbjct  280   NPIIEKYLRRQLTK  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6161  CTDL  6172
             CTDL
Sbjct  177   CTDL  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  2262  YGFSGPIFE  2236
             Y F  PI E
Sbjct  276   YDFKNPIIE  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3804  MNMRN  3818
             M++RN
Sbjct  2     MDLRN  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1111  EKFIKD  1128
             +KFI D
Sbjct  13    DKFIED  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -3

Query  2360  PRSLEFSY*VL  2328
             PR L F   VL
Sbjct  129   PRALSF---VL  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  801  VKVVEE  818
            VK +EE
Sbjct  171  VKLIEE  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6794  LKQIASKL  6817
             LKQ   KL
Sbjct  198   LKQRPTKL  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3215  FALPLLIV  3192
             +AL LL V
Sbjct  230   YALELLTV  237


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2552  WKGSP  2566
             W GSP
Sbjct  335   WDGSP  339


>sp|Q9Y4I1.2|MYO5A_HUMAN  RecName: Full=Myosin-Va; AltName: Full=Dilute myosin heavy chain, 
non-muscle; AltName: Full=Myosin-12; AltName: Full=Myosin 
heavy chain 12; AltName: Full=Myoxin
Length=1855

 GENE ID: 4644 MYO5A | myosin VA (heavy chain 12, myoxin) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +1

Query  5695  YRKILRQRK  5721
             YRKILR+ K
Sbjct  857   YRKILREHK  865


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  7151  SNNESE-IF  7174
             S NESE IF
Sbjct  1118  SSNESEYIF  1126


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/19 (47%), Positives = 12/19 (63%), Gaps = 3/19 (15%)
 Frame = +3

Query  903  TVGGHQ--AAMQMLKETIN  953
            TVG HQ    +++L ET N
Sbjct  634  TVG-HQFRNSLHLLMETLN  651


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +1

Query  5764  SGNESE----GEISALVEM  5808
             S NESE     EI    EM
Sbjct  1118  SSNESEYIFSSEIA---EM  1133


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5033  TSSINNTKK  5059
             TS IN  KK
Sbjct  1534  TSTINSIKK  1542


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 7/14 (50%)
 Frame = -2

Query  5853  QII-------NIPR  5833
             QII       NIPR
Sbjct  1455  QIIDEPIRPVNIPR  1468


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 26/49 (53%)
 Frame = +3

Query  2223  RKGK-FQKLGLKIHTILQYLP*RKKTVLNGEN**ISE-----NLIRELK  2351
             RK K FQ  G+     L+Y    KK     E+    E     NLI ELK
Sbjct  1468  RKEKDFQ--GM-----LEY----KK-----ED----EQKLVKNLILELK  1496


 Score = 17.6 bits (34),  Expect(2) =  4230
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5258  DTWA  5269
             DTWA
Sbjct  521   DTWA  524


 Score = 17.2 bits (33),  Expect(2) =  4230
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             L+LL+E
Sbjct  506   LDLLDE  511


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -1

Query  1333  IVLQS---GF  1313
             IVLQS   GF
Sbjct  842   IVLQSYLRGF  851


 Score = 18.5 bits (36),  Expect(2) =  5105
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2445  EKYASPTSST  2416
             EK  SPTS T
Sbjct  596   EKAISPTSAT  605


 Score = 15.9 bits (30),  Expect(2) =  5105
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2473  LPEVF  2459
             LPE F
Sbjct  588   LPELF  592


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3283  NMGNM  3297
             NMG+M
Sbjct  131   NMGDM  135


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3104  WTYQ  3115
             WTYQ
Sbjct  701   WTYQ  704


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3152  KYARMR  3169
             KY RMR
Sbjct  785   KYLRMR  790


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -2

Query  2523  LIPGVSLFILGM  2488
             LIPG   +IL M
Sbjct  1504  LIPGLPAYILFM  1515


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6465  VLLLH  6451
             VLLLH
Sbjct  37    VLLLH  41


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2654  NHPCID  2637
             N+PCI+
Sbjct  492   NQPCIN  497


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3522  RLSYKQFI  3545
             RLS K FI
Sbjct  542   RLSNKAFI  549


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4960  NKAFLI  4943
             NKAF I
Sbjct  545   NKAFII  550


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  4235  MNKELKKIIGQ  4267
             M KE KK +G+
Sbjct  627   MAKEHKKTVGH  637


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = -3

Query  3056  GH---NTLHVLVLLESL  3015
             GH   N LH   L+E L
Sbjct  636   GHQFRNSLH--LLMETL  650


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  7869  AKTILKPTKPPTII  7828
             AK  L  TK  TII
Sbjct  809   AK-FLRRTKAATII  821


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 30/49 (61%)
 Frame = +3

Query  8562  VPLRPMTYKAAVDLSHFLKEKGGLEGLIHSQRR-----------QDILD  8675
             VPL         D+S FLK    L      Q R           QD LD
Sbjct  1148  VPL---------DMSLFLK----L------QKRVTELEQEKQVMQDELD  1177


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 14/30 (46%)
 Frame = +2

Query  6173  KNDTN--TNSSSGRMI-------M-EKGEI  6232
             K+D N  T+S     I       M +KGEI
Sbjct  1283  KDDKNTMTDST----ILLEDVQKMKDKGEI  1308


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +2

Query  5150  NEWTLELLEEL  5182
             NE  L+L+E+L
Sbjct  1410  NE-NLDLMEQL  1419


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2172  NGHCLT  2155
             N HCLT
Sbjct  1586  NEHCLT  1591


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  5865  SVALQIINIP  5836
             S AL+ I IP
Sbjct  1835  SLALETIQIP  1844


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = -3

Query  8750  WISDP---W  8733
             WI DP   W
Sbjct  14    WIPDPEEVW  22


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1455  ATIMMQR  1475
             A I MQR
Sbjct  792   AAITMQR  798


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  4692  RGWFYRHHY  4718
             RGW  R HY
Sbjct  874   RGWLARTHY  882


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +2

Query  3638  SELVNQIIEQLI  3673
             S+L  QI +QL+
Sbjct  1603  SDLAIQIYQQLV  1614


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  4584  IMENRWQVMIV  4616
             ++EN  Q MIV
Sbjct  1616  VLENILQPMIV  1626


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3196  LFYII  3182
             +FYII
Sbjct  1692  MFYII  1696


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6496  DICTWS  6479
             D C WS
Sbjct  1709  DMCSWS  1714


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4363  CTVPP  4349
             CT+PP
Sbjct  348   CTIPP  352


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  1743  TTPPQKQEP  1769
             T PP K+EP
Sbjct  349   TIPP-KHEP  356


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7795  YVKPI  7781
             Y+KPI
Sbjct  387   YIKPI  391


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2730  HLNRCCL  2710
             HLN C L
Sbjct  531   HLNKCAL  537


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1886  DTVLEE  1903
             DTV EE
Sbjct  570   DTVFEE  575


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8080  LERLTLD  8100
             LE L LD
Sbjct  731   LEKLILD  737


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  9064  AYMQDLRA  9041
             AY++ LRA
Sbjct  756   AYLEKLRA  763


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +1

Query  8527  RRR---RW----VFQSHLR  8562
             RRR   R     V QS LR
Sbjct  831   RRRYKIRRAATIVLQSYLR  849


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  466   NRSSSL  449
             NRSS L
Sbjct  1319  NRSSAL  1324


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7007  CHFLQC  6990
             C FL+C
Sbjct  1562  CRFLHC  1567


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  737   YRVILADL  714
             YR +L DL
Sbjct  1598  YRQVLSDL  1605


 Score = 15.9 bits (30),  Expect(2) = 17271
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3497  TLTDTT  3514
             T+TD T
Sbjct  1288  TMTDST  1293


 Score = 15.5 bits (29),  Expect(2) = 17271
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3423  MGQLT  3437
             M QLT
Sbjct  1249  MEQLT  1253


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6005  PNPQEV  6022
             P+P+EV
Sbjct  16    PDPEEV  21


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1590  EGHQM  1604
             E HQM
Sbjct  319   ESHQM  323


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = -2

Query  7116  IFDEHLICPLMGGAY  7072
             IF     C LMG  Y
Sbjct  359   IF-----CELMGVDY  368


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5780  KEKYQ  5794
             K+KYQ
Sbjct  738   KDKYQ  742


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2777  LWMGYE  2794
             LW+ YE
Sbjct  1335  LWLVYE  1340


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +2

Query  2588  TKILEPFRKQNPDI  2629
             TK L   R  NPDI
Sbjct  56    TKELPHLR--NPDI  67


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -3

Query  4625  YLPHNHHLPSVFHN  4584
             YL    H P V HN
Sbjct  79    YL----HEPAVLHN  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5808  HLHKC  5794
             HL KC
Sbjct  531   HLNKC  535


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             EE IK L
Sbjct  574   EEQIKVL  580


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  4235  MNK-ELKK  4255
             M K ELKK
Sbjct  900   MAKRELKK  907


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5855  SATEKL  5872
             S TEKL
Sbjct  959   SETEKL  964


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  6572  EEVVI-RS  6592
             EEV I RS
Sbjct  1264  EEVLILRS  1271


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8183  DSNTVGDST  8157
             D NT  DST
Sbjct  1285  DKNTMTDST  1293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2669  DLEIGQ  2686
             +LE+GQ
Sbjct  1442  ELEVGQ  1447


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/10 (40%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  3641  ELVNQIIEQL  3670
             EL+ Q++ Q+
Sbjct  1683  ELIKQVVKQM  1692


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2783  SKGMEV  2766
             SKGM++
Sbjct  1714  SKGMQI  1719


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7348  RKHYGRSL  7371
             R HY RS+
Sbjct  879   RTHYKRSM  886


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6378  RPVQRY  6395
             R V+RY
Sbjct  913   RSVERY  918


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1062  LQEQI  1076
             LQE+I
Sbjct  988   LQEEI  992


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4229  ESMNKELK  4252
             ES NK LK
Sbjct  1212  ESENKKLK  1219


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +2

Query  7529  LKD-----QQLL  7549
             LK+     QQLL
Sbjct  1374  LKEENNRQQQLL  1385


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2725  QQMLSQ  2708
             QQ+L Q
Sbjct  1382  QQLLAQ  1387


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4622  SRQDE  4636
             SRQ+E
Sbjct  1583  SRQNE  1587


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6192  IVVAGE  6209
             I+V GE
Sbjct  159   IIVSGE  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  4106  KTIHTDNGSNF  4138
             KT   DN S F
Sbjct  210   KTTRNDNSSRF  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2924  RQLCKLL  2944
             RQ C LL
Sbjct  309   RQACTLL  315


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1068  EQIGW  1082
             EQI W
Sbjct  480   EQIPW  484


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7501  LELLD  7487
             L+LLD
Sbjct  506   LDLLD  510


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2936  KLLRGTKALT  2965
             K LR TKA T
Sbjct  810   KFLRRTKAAT  819


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8930  RAASGVLQ  8953
             RAA  VLQ
Sbjct  838   RAATIVLQ  845


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4517  AVVIQ  4531
             AV+IQ
Sbjct  866   AVIIQ  870


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2658  YKSSM  2644
             YK SM
Sbjct  882   YKRSM  886


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6563  LAEEE  6577
             L EEE
Sbjct  973   LSEEE  977


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1683  EENSL  1669
             EEN L
Sbjct  1029  EENTL  1033


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  3301  DRVLASHLDS  3330
             +R L S+L S
Sbjct  1346  NRLLESQLQS  1355


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +2

Query  7526  YLKDQQ----LL  7549
             YL D Q    LL
Sbjct  1522  YLNDDQKVRSLL  1533


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7385  VQARQLL  7405
             +QA QLL
Sbjct  1748  IQAAQLL  1754


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5204  FPRIW  5218
             F R+W
Sbjct  10    FARVW  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5899  RYPII  5885
             RY II
Sbjct  231   RYRII  235


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  5116  GLFHLSSVSF  5087
             G  HL  V F
Sbjct  331   GILHLGNVGF  340


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6812  KLREQF  6829
             KL +QF
Sbjct  460   KLQQQF  465


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 6/14 (42%)
 Frame = -1

Query  1348  PNAFKIVLQSGFAF  1307
             PN FK      F F
Sbjct  663   PNDFK------FPF  670


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8796  KIEEANK  8816
             K++E NK
Sbjct  935   KVDEQNK  941


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7566  EQPQI  7552
             E PQI
Sbjct  1192  ERPQI  1196


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8631  LEGLIHSQRR  8660
             LE   +SQ R
Sbjct  1349  LESQLQSQKR  1358


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1002  IAPGQ  1016
             I PGQ
Sbjct  1451  ISPGQ  1455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2333  LNKRTQDF  2356
             L KR  DF
Sbjct  1544  LKKRGDDF  1551


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5285  IRILQQL  5305
             I I QQL
Sbjct  1607  IQIYQQL  1613


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2384  PAGLKKKKS  2410
             P GL K  S
Sbjct  1643  PTGLRKRTS  1651


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6045  FSVTF  6031
             F VTF
Sbjct  1825  FPVTF  1829


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  905  SGGTSSSHANV  937
            SG  S S ANV
Sbjct  184  SG--SASEANV  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3292  NMVDRVLAS  3318
             N  + VLAS
Sbjct  191   NVEEKVLAS  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4429  KNSKF  4443
             K SKF
Sbjct  581   KSSKF  585


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  108  HTLLEALKA  82
            H L+E L A
Sbjct  644  HLLMETLNA  652


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8340  YSKIL  8326
             Y KIL
Sbjct  857   YRKIL  861


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3524  TELQAIY  3544
             T L+ IY
Sbjct  951   TNLEGIY  957


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2210  TEMEKE  2227
             TE+E E
Sbjct  1163  TELEQE  1168


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6572  EEVVIRS  6592
             EE V RS
Sbjct  1180  EEQVLRS  1186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2551  MERITS  2568
             ME  TS
Sbjct  1249  MEQLTS  1254


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3638  SELVNQ  3655
             S+LV Q
Sbjct  1271  SQLVSQ  1276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6584  IRSVN  6598
             IR VN
Sbjct  1461  IRPVN  1465


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2771  EVLSD  2757
             +VLSD
Sbjct  1600  QVLSD  1604


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6558  PFNSS  6544
             PFN S
Sbjct  1830  PFNPS  1834


>pdb|2ESV|A  Chain A, Structure Of The Hla-E-VmaprtlilKK50.4 TCR COMPLEX
Length=275


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             WME      WDRE
Sbjct  50    WMEQEGSEYWDRE  62


 Score = 21.8 bits (44),  Expect =   981
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +1

Query  184  AP--EQGPE-SE---RETRGALSTQDSA  249
            AP  EQ  E SE   RETR   S  D A
Sbjct  48   APWMEQ--EGSEYWDRETR---SARDTA  70


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  992  MHWMH  978
            ++WMH
Sbjct  94   LQWMH  98


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  125   LNEDLRSWTA  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  10    SVSRPGRGE  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  21    FISVGY  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GY QF
Sbjct  111   GYEQF  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  254   QRYTCH  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  18    EPRFISVGY  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  21    FISVGYVD  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  85    NQSE  88


>ref|NP_002525.2|  2'-5'-oligoadenylate synthase 1 isoform 2 [Homo sapiens]
Length=364

 GENE ID: 4938 OAS1 | 2',5'-oligoadenylate synthetase 1, 40/46kDa [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/12 (58%), Positives = 11/12 (91%), Gaps = 0/12 (0%)
 Frame = +2

Query  2195  LVEICTEMEKEG  2230
             L+E CT+++KEG
Sbjct  173   LIEECTDLQKEG  184


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3359  LVKLWYQ  3379
             LVK WYQ
Sbjct  211   LVKHWYQ  217


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +2

Query  5549  LIRTVRLIKLLYQSSK  5596
             LIR   L+K  YQ  K
Sbjct  208   LIR---LVKHWYQNCK  220


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3423  MGQLTG  3440
             +GQLTG
Sbjct  156   LGQLTG  161


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 17/31 (54%)
 Frame = +3

Query  6858  NPQ-------EGT--QKL*RTVLIVEGNFST  6923
             NPQ       E T  QK        EG FST
Sbjct  166   NPQIYVKLIEECTDLQK--------EGEFST  188


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  3650  NQIIE-----QLIK  3676
             N IIE     QL K
Sbjct  280   NPIIEKYLRRQLTK  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6161  CTDL  6172
             CTDL
Sbjct  177   CTDL  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  2262  YGFSGPIFE  2236
             Y F  PI E
Sbjct  276   YDFKNPIIE  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3804  MNMRN  3818
             M++RN
Sbjct  2     MDLRN  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1111  EKFIKD  1128
             +KFI D
Sbjct  13    DKFIED  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -3

Query  2360  PRSLEFSY*VL  2328
             PR L F   VL
Sbjct  129   PRALSF---VL  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  801  VKVVEE  818
            VK +EE
Sbjct  171  VKLIEE  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6794  LKQIASKL  6817
             LKQ   KL
Sbjct  198   LKQRPTKL  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3215  FALPLLIV  3192
             +AL LL V
Sbjct  230   YALELLTV  237


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2552  WKGSP  2566
             W GSP
Sbjct  335   WDGSP  339


>sp|P13671.3|CO6_HUMAN  RecName: Full=Complement component C6; Flags: Precursor
Length=934

 GENE ID: 729 C6 | complement component 6 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 9/14 (64%), Positives = 12/14 (85%), Gaps = 1/14 (7%)
 Frame = +2

Query  8162  NLL-QYWSQELKNS  8200
             +LL Q+ S+ELKNS
Sbjct  376   DLLYQFSSEELKNS  389


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +1

Query  964  QNGIECIQCM  993
            Q G ECI CM
Sbjct  779  QSGSECI-CM  787


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 12/28 (42%)
 Frame = +3

Query  795  AWVKV---VEEKAFS---------PEVI  842
            AW K     EEK FS         P VI
Sbjct  456  AWEKGSSGLEEKTFSEWLESVKENPAVI  483


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  8796  KIEEA---NK  8816
             KIEEA   NK
Sbjct  134   KIEEADCKNK  143


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -1

Query  5578  KLD---ESDC---SDE  5549
             KL+   E DC   SDE
Sbjct  155   KLECNGENDCGDNSDE  170


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4733  KNKFR  4747
             KNKFR
Sbjct  141   KNKFR  145


 Score = 17.6 bits (34),  Expect(2) =  5402
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  623  HQGSFRQ  643
            H+GSF Q
Sbjct  429  HEGSFIQ  435


 Score = 17.2 bits (33),  Expect(2) =  5402
 Identities = 11/30 (36%), Positives = 11/30 (36%), Gaps = 13/30 (43%)
 Frame = +3

Query  549  SEELRSLYNTVATL------YCVHQRIEIK  620
            SEEL         L       CV  RIE K
Sbjct  383  SEELKN-----SGLTEEEAKHCV--RIETK  405


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9053  LHISSC  9070
             LHI SC
Sbjct  832   LHIGSC  837


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4000  YQDNF  3986
             YQ+NF
Sbjct  56    YQENF  60


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3848  DFNLPPVV  3871
             DF L P+V
Sbjct  484   DFELAPIV  491


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6090  SSCICSTMS  6064
             S CIC  MS
Sbjct  782   SECIC--MS  788


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2256  FSGPIF  2239
             FS PIF
Sbjct  279   FSVPIF  284


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  923  CLMSPHC  903
            CL+ P+C
Sbjct  882  CLLPPQC  888


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6554  NGSLAEEE  6577
             N  L EEE
Sbjct  388   NSGLTEEE  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4625  RQDED  4639
             RQ+ED
Sbjct  606   RQEED  610


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2020  CTYSFM  2003
             CT+S M
Sbjct  611   CTFSIM  616


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5297  QQLLFIH  5317
             QQL F H
Sbjct  827   QQLHFLH  833


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 7/20 (35%)
 Frame = +2

Query  5036  SSINNTKKDKATFA*C-YET  5092
             SS N TKK+      C Y+T
Sbjct  853   SS-NSTKKES-----CGYDT  866


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  761  HLPLD  747
            HLPL+
Sbjct  344  HLPLE  348


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7045  VYNLFY  7028
             VY+L Y
Sbjct  374   VYDLLY  379


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  292  EYAKNFD  312
            EYA  FD
Sbjct  513  EYAAKFD  519


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2667  DPTYKSS  2647
             D TYK S
Sbjct  578   DATYKRS  584


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8945  VLQELLT  8965
             V QE LT
Sbjct  708   VVQEVLT  714


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  505  VDKY  516
            VDKY
Sbjct  52   VDKY  55


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7566  LENSF  7580
             L+NSF
Sbjct  209   LDNSF  213


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2902  LTCP  2891
             LTCP
Sbjct  730   LTCP  733


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5572  DESDC  5558
             DE DC
Sbjct  169   DERDC  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6596  NFTDNAK  6616
             NFT  AK
Sbjct  324   NFTTKAK  330


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6041  LSHLP  6027
             L HLP
Sbjct  342   LNHLP  346


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1673  EFSSEQ  1690
             +FSSE+
Sbjct  380   QFSSEE  385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8034  LSGTIC  8051
             LSGT C
Sbjct  534   LSGTEC  539


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4570  CFSSW  4556
             C SSW
Sbjct  570   CWSSW  574


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1912  ARKME  1926
             ARK+E
Sbjct  153   ARKLE  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  571  YNDLSS  554
            Y DL S
Sbjct  255  YKDLTS  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  623  HQGSF  637
            +QGSF
Sbjct  267  QQGSF  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7672  FSVP  7661
             FSVP
Sbjct  279   FSVP  282


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  671  EKSTASSS  694
            EK  AS S
Sbjct  871  EKCSASTS  878


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  3000  NWQ  3008
             NWQ
Sbjct  74    NWQ  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4585  IPNDLC  4568
             IP  LC
Sbjct  128   IPSKLC  133


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5278  SHNKNS  5295
             SH K+S
Sbjct  306   SHKKDS  311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  1263  SQEVKNW-MTE  1292
             S+E KN  +TE
Sbjct  383   SEELKNSGLTE  393


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  1569  GCW  1577
             GCW
Sbjct  569   GCW  571


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6236  NCSFNI  6253
             +C F I
Sbjct  610   DCTFSI  615


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5507  PKAFV  5493
             PK FV
Sbjct  733   PKGFV  737


>ref|NP_079520.1|  testis-specific gene 10 protein [Homo sapiens]
 ref|NP_878915.2|  testis-specific gene 10 protein [Homo sapiens]
Length=698

 GENE ID: 80705 TSGA10 | testis specific, 10 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 23/60 (38%), Positives = 25/60 (41%), Gaps = 16/60 (26%)
 Frame = +2

Query  3500  LTDTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDQSESELVN-QIIEQLIK  3676
             L DT N   EL  I    QD  LEVN   +      I   +    ESE  N Q  EQL K
Sbjct  375   LNDTHN---ELNDIKQKVQDTNLEVNKLKN------ILKSE----ESE--NRQMMEQLRK  419


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5113  SPRRPRAT  5136
             SPRRP  T
Sbjct  8     SPRRPSPT  15


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +3

Query  6678  QEKESVSREDQ--GEHL  6722
             QEKES   E Q   EHL
Sbjct  586   QEKES---EIQLLKEHL  599


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 5/23 (21%)
 Frame = +1

Query  8437  QHLETW----KNME-QSQVAIQQ  8490
             Q LE       + E QSQ+A Q+
Sbjct  565   QNLEALLVANRDKEYQSQIALQE  587


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  285  RRPSP  271
            RRPSP
Sbjct  10   RRPSP  14


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  927  MQMLKETI  950
            M ++KETI
Sbjct  165  MTLMKETI  172


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2171  LTEEKI  2188
             LT+EKI
Sbjct  230   LTQEKI  235


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = +2

Query  2825  IVLPEKDSWTVNDIQ  2869
             I L EK+S    +IQ
Sbjct  583   IALQEKES----EIQ  593


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1978  SDTHRNL  1998
             SDT+R L
Sbjct  215   SDTQRHL  221


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/19 (36%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +3

Query  930  QML----KETINEEAAEWD  974
            QM+    K   NE+A  W+
Sbjct  412  QMMEQLRKA--NEDAENWE  428


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8397  RMRR  8408
             RMRR
Sbjct  328   RMRR  331


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4807  QEKETGI  4827
             QEKE  I
Sbjct  586   QEKESEI  592


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 12/26 (46%)
 Frame = +3

Query  1689  RPEPTAPPEESFRSG---VE---TTT  1748
             RP PTA      R     VE   TTT
Sbjct  11    RPSPTA------RGANCDVELLKTTT  30


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  411  KKKYKL  428
            KKKY L
Sbjct  223  KKKYEL  228


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6967  STIKPST  6947
             ST KP T
Sbjct  662   STMKPNT  668


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4815  FLLY  4804
             FLLY
Sbjct  65    FLLY  68


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 10/25 (40%)
 Frame = +2

Query  6785  NNTLKQIAS----------KLREQF  6829
             N+ L QIA            L EQF
Sbjct  337   NDELAQIARERDILAHDNDNLQEQF  361


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5068  HLCL  5079
             HLCL
Sbjct  598   HLCL  601


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  316  RRLEGERWVRER  351
            R L  ER  RER
Sbjct  632  RQLGTERFERER  643


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6074  EQMHEDIISL  6103
             EQ +E+I  L
Sbjct  69    EQAQEEITRL  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8814  KGENTSL  8834
             K EN SL
Sbjct  197   KAENNSL  203


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 20/47 (42%)
 Frame = +3

Query  936   LKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDI-AGTTSTLQEQ  1073
             L ET N+E A+           IA    RE R  DI A     LQEQ
Sbjct  333   LDET-NDELAQ-----------IA----RE-R--DILAHDNDNLQEQ  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4226  VESMNKE  4246
             V+S+N E
Sbjct  459   VDSLNRE  465


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4058  QETAY  4072
             QETA+
Sbjct  130   QETAF  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5481  LAMK  5470
             LAMK
Sbjct  291   LAMK  294


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1274  KKLDD  1288
             KKL+D
Sbjct  373   KKLND  377


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6612  ALSVKLTD  6589
             ALS KL D
Sbjct  370   ALSKKLND  377


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8289  IALQ  8278
             IALQ
Sbjct  583   IALQ  586


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7895  RQGYS  7909
             RQ YS
Sbjct  650   RQNYS  654


>ref|NP_003956.2|  C-C chemokine receptor-like 2 isoform 1 [Homo sapiens]
Length=344

 GENE ID: 9034 CCRL2 | chemokine (C-C motif) receptor-like 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = -2

Query  8172  CRRFHQYLRASHPLRPR  8122
             CR FH  LR   PL PR
Sbjct  312   CRCFH--LRSNTPLQPR  326


 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = -3

Query  2420  VL-LLIFSFL------TLR  2385
             VL L IF FL      TLR
Sbjct  210   VLPLFIFTFLYVQMRKTLR  228


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1189  MSRMLVGLY  1163
             M   L+GLY
Sbjct  102   MCKILIGLY  110


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7511  LAVERYL  7531
             L V+RYL
Sbjct  124   LTVQRYL  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  3183  LVWAPLILAYF  3151
             L WAP   A+F
Sbjct  249   LMWAPYNIAFF  259


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3548  LDKLLV  3531
             LD LLV
Sbjct  54    LDNLLV  59


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9000  SPQRKVPC  8977
             S  R VPC
Sbjct  140   SARRRVPC  147


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4581  LMIFAFL  4561
             L IF FL
Sbjct  213   LFIFTFL  219


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +2

Query  4646  ME----K--FSKTPY  4672
             ME    K  FS TP+
Sbjct  174   MEDQKYKCAFSRTPF  188


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = -2

Query  3189  TS-LVWAPLILAYFPVF  3142
             TS L W   ILA  P F
Sbjct  151   TSVLAWVTAILATLPEF  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5388  YWLHFL  5371
             +W HFL
Sbjct  195   FWKHFL  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8893  LHSNTSL  8873
             L SNT L
Sbjct  317   LRSNTPL  323


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8942  GVLQELL  8962
             GVL  LL
Sbjct  52    GVLDNLL  58


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4254  FFNSL  4240
             FFN L
Sbjct  119   FFNCL  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  823  AFSSTTF  803
            AFS T F
Sbjct  182  AFSRTPF  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  522  QLQPSL  539
            QL PSL
Sbjct  39   QLVPSL  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6492  MSAQYNV  6512
             M A YN+
Sbjct  250   MWAPYNI  256


>pdb|1KPR|A  Chain A, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|1KPR|C  Chain C, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|1KTL|A  Chain A, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
 pdb|1KTL|C  Chain C, The Human Non-Classical Major Histocompatibility Complex 
Molecule Hla-E
Length=274


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             WME      WDRE
Sbjct  51    WMEQEGSEYWDRE  63


 Score = 21.8 bits (44),  Expect =   981
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +1

Query  184  AP--EQGPE-SE---RETRGALSTQDSA  249
            AP  EQ  E SE   RETR   S  D A
Sbjct  49   APWMEQ--EGSEYWDRETR---SARDTA  71


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  992  MHWMH  978
            ++WMH
Sbjct  95   LQWMH  99


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  126   LNEDLRSWTA  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  11    SVSRPGRGE  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  22    FISVGY  27


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GY QF
Sbjct  112   GYEQF  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  19    EPRFISVGY  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  22    FISVGYVD  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


>pdb|1G1Q|A  Chain A, Crystal Structure Of P-Selectin LectinEGF DOMAINS
 pdb|1G1Q|B  Chain B, Crystal Structure Of P-Selectin LectinEGF DOMAINS
 pdb|1G1Q|C  Chain C, Crystal Structure Of P-Selectin LectinEGF DOMAINS
 7 more sequence titles
 pdb|1G1Q|D  Chain D, Crystal Structure Of P-Selectin LectinEGF DOMAINS
 pdb|1G1R|A  Chain A, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed 
With Slex
 pdb|1G1R|B  Chain B, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed 
With Slex
 pdb|1G1R|C  Chain C, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed 
With Slex
 pdb|1G1R|D  Chain D, Crystal Structure Of P-Selectin LectinEGF DOMAINS Complexed 
With Slex
 pdb|1G1S|A  Chain A, P-Selectin LectinEGF DOMAINS COMPLEXED WITH PSGL-1 Peptide
 pdb|1G1S|B  Chain B, P-Selectin LectinEGF DOMAINS COMPLEXED WITH PSGL-1 Peptide
Length=162


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = +1

Query  1999  WT*SYRYS-------ISRTYTCQ  2046
             WT  Y YS       ISR Y CQ
Sbjct  1     WT--YHYSTKAYSWNISRKY-CQ  20


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1433  NEPSNK  1450
             NEP NK
Sbjct  79    NEPNNK  84


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7673  INNYT  7687
             I NYT
Sbjct  137   IGNYT  141


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E++Y N
Sbjct  34    EIDYLN  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6464  SYYYI  6450
             SYY I
Sbjct  47    SYYWI  51


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8169  YSIGVR  8186
             Y IG+R
Sbjct  49    YWIGIR  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5949  ALASDAQN  5926
             AL  +A+N
Sbjct  68    ALTNEAEN  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8263  FYNPIC  8246
             FY P C
Sbjct  148   FYGPEC  153


>sp|P28907.2|CD38_HUMAN  RecName: Full=ADP-ribosyl cyclase 1; AltName: Full=Cyclic ADP-ribose 
hydrolase 1; Short=cADPr hydrolase 1; AltName: Full=T10; 
AltName: CD_antigen=CD38
Length=300

 GENE ID: 952 CD38 | CD38 molecule [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 6/21 (28%)
 Frame = +3

Query  4167  GGRESSRNL--EFPTIPKVKE  4223
             GGRE SR+L  + PTI   KE
Sbjct  245   GGREDSRDLCQD-PTI---KE  261


 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
 Frame = +3

Query  738  VQNIQGQMVHQAISPRTLNAWV  803
            V+N Q + V+      TL AWV
Sbjct  227  VHNLQPEKVQ------TLEAWV  242


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +3

Query  6660  QDPTTIQEKESV  6695
             QDPT I E ES+
Sbjct  255   QDPT-IKELESI  265


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5596  VVHVM  5610
             VVHVM
Sbjct  203   VVHVM  207


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  7491  LM---PQTVSCN  7465
             LM    QTV CN
Sbjct  109   LMKLGTQTVPCN  120


 Score = 17.6 bits (34),  Expect(2) =  9628
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2715  CLSSSIFVL  2689
             CL  SI VL
Sbjct  25    CLGVSILVL  33


 Score = 16.8 bits (32),  Expect(2) =  9628
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2573  ILLVILSIPV  2544
             IL V+L + V
Sbjct  34    ILVVVLAVVV  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6261  LVLIL  6247
             LVLIL
Sbjct  31    LVLIL  35


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1665  RPGNFLQ  1685
             RP  FLQ
Sbjct  280   RPDKFLQ  286


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  2153  LGHPFLALILLV  2118
             LG   L LIL V
Sbjct  26    LGVSILVLILVV  37


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8805  LLSYLA  8788
             LL YLA
Sbjct  149   LLGYLA  154


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7386  YRPDNY  7403
             YRPD +
Sbjct  279   YRPDKF  284


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  7590  LCLG--MLV  7610
             LCLG   LV
Sbjct  24    LCLGVSILV  32


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8985  VPCSK  8971
             VPC K
Sbjct  117   VPCNK  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  226   EVHN  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5023  CRDPT  5009
             C DPT
Sbjct  254   CQDPT  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1761  QEPIDKEL  1784
             Q+P  KEL
Sbjct  255   QDPTIKEL  262


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4753  CTSE  4742
             CTSE
Sbjct  296   CTSE  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6949  TIKQL  6935
             TIK+L
Sbjct  258   TIKEL  262


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4241  KELKKII  4261
             KEL  II
Sbjct  260   KELESII  266


>ref|NP_631904.1|  NKG2D ligand 4 precursor [Homo sapiens]
 sp|Q8TD07.1|N2DL4_HUMAN  RecName: Full=NKG2D ligand 4; Short=NKG2DL4; Short=N2DL-4; AltName: 
Full=Retinoic acid early transcript 1E; AltName: Full=Lymphocyte 
effector toxicity activation ligand; AltName: Full=RAE-1-like 
transcript 4; Short=RL-4; Flags: Precursor
 gb|AAL58090.1|  lymphocyte effector toxicity activation ligand [Homo sapiens]
Length=263

 GENE ID: 135250 RAET1E | retinoic acid early transcript 1E [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 12/38 (31%)
 Frame = -3

Query  3104  IGLAPASVFLLLSLLMGHNTLHVLVLLE------SLCF  3009
             I L    V LLL LL+       L+ LE      SLCF
Sbjct  4     ISLTSSPVRLLLFLLL------LLIALEIMVGGHSLCF  35


 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1125  RWIILG  1142
             RWIILG
Sbjct  226   RWIILG  231


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = +2

Query  1907  SLPGRWKPKMIGGIGGFI  1960
             SLP RW    I   G FI
Sbjct  222   SLPDRW---II--LGAFI  234


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  4827  NASLFLLY-ADPNM  4789
             N  LFL Y  D NM
Sbjct  57    NKNLFLQYNSDNNM  70


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4155  LTVAPVKLL  4129
             LT  PV LL
Sbjct  6     LTSSPVRLL  14


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = +3

Query  1677  FL---QSRPEPTAPP  1712
             FL   +  PEPT  P
Sbjct  196   FLGHWEAMPEPTVSP  210


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8446  ETWK  8457
             ETWK
Sbjct  169   ETWK  172


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3221  LFFALPLLIVL  3189
             L F L LLI L
Sbjct  14    LLFLLLLLIAL  24


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -1

Query  6238  VFYLS---FLHYHS  6206
             VF L    FL+Y S
Sbjct  54    VF-LNKNLFLQYNS  66


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4906  ISWSASS  4886
             I WS SS
Sbjct  216   IHWSSSS  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +2

Query  2801  PDKWTVQPIVL  2833
             PD W    I+L
Sbjct  224   PDRW----IIL  230


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +3

Query  9030  GEWRA----LR  9050
             GEW A    LR
Sbjct  251   GEWQAGLWPLR  261


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8298  MWRIAL  8281
             M RI L
Sbjct  1     MRRISL  6


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 1/18 (5%)
 Frame = +2

Query  8717  ELHTRARGQISTDLWMVL  8770
             EL T   G++  DL M L
Sbjct  89    EL-TQTLGEVGRDLRMLL  105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6579  TSSSARL  6559
             TSS  RL
Sbjct  7     TSSPVRL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = +2

Query  803  KSSRREGFQPRSDTHVF  853
            KS  R G QP  + +VF
Sbjct  40   KSLSRPG-QPWCEAQVF  55


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1043  YVTSPW  1026
             Y TS W
Sbjct  82    YATSTW  87


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6663  DPTTIQ  6680
             DP T Q
Sbjct  116   DPSTLQ  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5831  LLGMLMIC  5854
             L+G  +IC
Sbjct  238   LMGIVLIC  245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4152  TVAPV  4138
             TV PV
Sbjct  207   TVSPV  211


>ref|NP_005507.3|  HLA class I histocompatibility antigen, alpha chain E precursor 
[Homo sapiens]
Length=358

 GENE ID: 3133 HLA-E | major histocompatibility complex, class I, E
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 26.1 bits (54),  Expect =    52
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             WME      WDRE
Sbjct  72    WMEQEGSEYWDRE  84


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +1

Query  5380  EPVDPRLEPWKHPGSQP  5430
             EPV  R   WK P SQP
Sbjct  289   EPVTLR---WK-PASQP  301


 Score = 21.8 bits (44),  Expect =   981
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +1

Query  184  AP--EQGPE-SE---RETRGALSTQDSA  249
            AP  EQ  E SE   RETR   S  D A
Sbjct  70   APWMEQ--EGSEYWDRETR---SARDTA  92


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             RKKSSG
Sbjct  330   RKKSSG  335


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TLL LLS
Sbjct  5     TLLLLLS  11


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  992  MHWMH  978
            ++WMH
Sbjct  116  LQWMH  120


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  147   LNEDLRSWTA  156


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4373  IVDIIA  4390
             IV IIA
Sbjct  305   IVGIIA  310


 Score = 16.3 bits (31),  Expect(2) = 24145
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  32    SVSRPGRGE  40


 Score = 15.9 bits (30),  Expect(2) = 24145
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL   LA
Sbjct  8     LLLSEALA  15


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  43    FISVGY  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GY QF
Sbjct  133   GYEQF  137


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  276   QRYTCH  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -3

Query  2576  GILLVILSIPVEA  2538
             G LL  LS   EA
Sbjct  4     GTLLLLLS---EA  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  40    EPRFISVGY  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  43    FISVGYVD  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  107   NQSE  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7854  KPTKPPTI  7831
             KP   PTI
Sbjct  296   KPASQPTI  303


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4956  LLGHIVS  4976
             LLG +VS
Sbjct  314   LLGSVVS  320


>gb|AAY33483.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect(2) =    61
 Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 11/33 (33%)
 Frame = +2

Query  7007  TITLPCRIKQIINMW-----QKVGKA----MYA  7078
             TIT  CR  Q I  W     QK GKA     YA
Sbjct  20    TIT--CRASQGISSWLAWYQQKLGKAPKLLIYA  50


 Score = 18.0 bits (35),  Expect(2) =    61
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             +PLTFG
Sbjct  94    FPLTFG  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1946  FPLSF  1932
             FPL F
Sbjct  94    FPLTF  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>sp|P25963.1|IKBA_HUMAN  RecName: Full=NF-kappa-B inhibitor alpha; AltName: Full=I-kappa-B-alpha; 
Short=IkappaBalpha; Short=IkB-alpha; AltName: Full=Major 
histocompatibility complex enhancer-binding protein 
MAD3
Length=317

 GENE ID: 4792 NFKBIA | nuclear factor of kappa light polypeptide gene enhancer
in B-cells inhibitor, alpha [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect(2) =    68
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  685  KQQLTQD  705
            KQQLT+D
Sbjct  67   KQQLTED  73


 Score = 20.6 bits (41),  Expect(2) =    68
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  813  EEKAFSPEVI  842
            EEKA   EVI
Sbjct  85   EEKALTMEVI  94


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  3453  PNLVSLL  3433
             P+LVSLL
Sbjct  230   PDLVSLL  236


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  927  MQMLKETINEE  959
            +QML E  +EE
Sbjct  277  LQMLPESEDEE  287


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1537  QPEIAGPL  1560
             QPEIA  L
Sbjct  123   QPEIAEAL  130


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2615  QNPDIV  2632
             QNPD V
Sbjct  228   QNPDLV  233


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1492  KERLL  1506
             KERLL
Sbjct  22    KERLL  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1643  DLAFL  1657
             DLAFL
Sbjct  100   DLAFL  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  7454  QQHLLQLT  7477
             QQ+L QLT
Sbjct  266   QQQLGQLT  273


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = -1

Query  2725  QQMLSQL----LYFCSMLP  2681
             QQ L QL    L    MLP
Sbjct  266   QQQLGQLTLENL---QMLP  281


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5288  RILQQL  5305
             RI QQL
Sbjct  264   RIQQQL  269


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5823  PHLH  5812
             PHLH
Sbjct  170   PHLH  173


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  930  QMLKE  944
            QM KE
Sbjct  44   QMVKE  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2313  FLHL  2302
             FLHL
Sbjct  77    FLHL  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3714  KELEE  3728
             KEL+E
Sbjct  47    KELQE  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6368  VITQAC  6385
             V TQ C
Sbjct  162   VLTQSC  167


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2620  SRHSYLSI  2643
             S H YL I
Sbjct  191   SIHGYLGI  198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3554  QDSGLE  3571
             +DSGL+
Sbjct  30    HDSGLD  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3194  QLTE  3205
             QLTE
Sbjct  69    QLTE  72


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4229  ESMNKELKKI  4258
             E M KEL  I
Sbjct  43    EQMVKELQEI  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3527  ELQAI  3541
             ELQ I
Sbjct  48    ELQEI  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8514  LEAQE  8528
             LE QE
Sbjct  54    LEPQE  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5025  IVEIL  5011
             IVE L
Sbjct  198   IVELL  202


>pdb|3MLV|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With An Nof V3 Peptide
 pdb|3MLV|M  Chain M, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With An Nof V3 Peptide
Length=219


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  168   GVETTTPS-KQ  177


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = -1

Query  505  QPSDVSNRPGLTANRSSS  452
            QP  VS  PG TA  S S
Sbjct  6    QPPSVSVSPGQTASISCS  23


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  6     QPPSVS  11


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  201   YSCQVTH  207


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8211  KLTALF  8194
             KLT LF
Sbjct  102   KLTVLF  107


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  130  PS----SEELQA--NK-ATLVC  144


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +3

Query  6870  GTQKL*RTVLIVEG  6911
             GT KL  TVL  EG
Sbjct  100   GT-KL--TVLFGEG  110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4322  HNFKRKGGI  4348
             ++FKR  GI
Sbjct  49    QDFKRPSGI  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  122   APSVTL  127


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1159  LTILF  1145
             LT+LF
Sbjct  103   LTVLF  107


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3210  TASVNC  3193
             TAS+ C
Sbjct  17    TASISC  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2819  VLSIYQD  2799
             VL  YQD
Sbjct  44    VLLMYQD  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  113   LTVLAQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  163

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  164   PVKAGV  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  123   PSVTLF  128


>pdb|3MLU|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With A Zam18 V3 Peptide
Length=218


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  167   GVETTTPS-KQ  176


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = -1

Query  505  QPSDVSNRPGLTANRSSS  452
            QP  VS  PG TA  S S
Sbjct  5    QPPSVSVSPGQTASISCS  22


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  5     QPPSVS  10


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  200   YSCQVTH  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8211  KLTALF  8194
             KLT LF
Sbjct  101   KLTVLF  106


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  129  PS----SEELQA--NK-ATLVC  143


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +3

Query  6870  GTQKL*RTVLIVEG  6911
             GT KL  TVL  EG
Sbjct  99    GT-KL--TVLFGEG  109


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4322  HNFKRKGGI  4348
             ++FKR  GI
Sbjct  48    QDFKRPSGI  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  121   APSVTL  126


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1159  LTILF  1145
             LT+LF
Sbjct  102   LTVLF  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3210  TASVNC  3193
             TAS+ C
Sbjct  16    TASISC  21


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2819  VLSIYQD  2799
             VL  YQD
Sbjct  43    VLLMYQD  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  112   LTVLAQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  162

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  163   PVKAGV  168


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  122   PSVTLF  127


>pdb|3MLR|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With A Ny5 V3 Peptide
 pdb|3MLS|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex 
With A Hiv- 1 Gp120 V3 Mimotope
 pdb|3MLS|M  Chain M, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex 
With A Hiv- 1 Gp120 V3 Mimotope
 6 more sequence titles
 pdb|3MLS|N  Chain N, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex 
With A Hiv- 1 Gp120 V3 Mimotope
 pdb|3MLS|O  Chain O, Crystal Structure Of Anti-Hiv-1 V3 Mab 2557 Fab In Complex 
With A Hiv- 1 Gp120 V3 Mimotope
 pdb|3MLT|L  Chain L, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With A Ug1033 V3 Peptide
 pdb|3MLT|A  Chain A, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With A Ug1033 V3 Peptide
 pdb|3MLT|D  Chain D, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With A Ug1033 V3 Peptide
 pdb|3MLT|G  Chain G, Crystal Structure Of Anti-Hiv-1 V3 Fab 2557 In Complex 
With A Ug1033 V3 Peptide
Length=219


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  168   GVETTTPS-KQ  177


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = -1

Query  505  QPSDVSNRPGLTANRSSS  452
            QP  VS  PG TA  S S
Sbjct  6    QPPSVSVSPGQTASISCS  23


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  6     QPPSVS  11


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  201   YSCQVTH  207


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8211  KLTALF  8194
             KLT LF
Sbjct  102   KLTVLF  107


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  130  PS----SEELQA--NK-ATLVC  144


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4322  HNFKRKGGI  4348
             ++FKR  GI
Sbjct  49    QDFKRPSGI  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  122   APSVTL  127


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1159  LTILF  1145
             LT+LF
Sbjct  103   LTVLF  107


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3210  TASVNC  3193
             TAS+ C
Sbjct  17    TASISC  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2819  VLSIYQD  2799
             VL  YQD
Sbjct  44    VLLMYQD  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  113   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  163

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  164   PVKAGV  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  123   PSVTLF  128


>pdb|3MUH|L  Chain L, Crystal Structure Of Pg9 Light Chain
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVS RP    NR
Sbjct  52   DVSKRPSGVSNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  107   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  157

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  158   PVKAGV  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5413  HPGSQPK  5433
             HPG  PK
Sbjct  41    HPGKAPK  47


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|3MUG|A  Chain A, Crystal Structure Of Human Fab Pg16, A Broadly Reactive 
And Hiv-1 Neutralizing Antibody
 pdb|3MUG|C  Chain C, Crystal Structure Of Human Fab Pg16, A Broadly Reactive 
And Hiv-1 Neutralizing Antibody
 pdb|3MUG|E  Chain E, Crystal Structure Of Human Fab Pg16, A Broadly Reactive 
And Hiv-1 Neutralizing Antibody
 pdb|3MUG|G  Chain G, Crystal Structure Of Human Fab Pg16, A Broadly Reactive 
And Hiv-1 Neutralizing Antibody
 pdb|3MUG|I  Chain I, Crystal Structure Of Human Fab Pg16, A Broadly Reactive 
And Hiv-1 Neutralizing Antibody
 pdb|3MUG|K  Chain K, Crystal Structure Of Human Fab Pg16, A Broadly Reactive 
And Hiv-1 Neutralizing Antibody
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVS RP    NR
Sbjct  52   DVSHRPSGISNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS +SNR
Sbjct  57   PSGISNR  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2871  FCMSLT  2854
             FC SLT
Sbjct  89    FCSSLT  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  968  FCSFLID  948
            FCS L D
Sbjct  89   FCSSLTD  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4419  FCNSL  4405
             FC SL
Sbjct  89    FCSSL  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|3MME|L  Chain L, Structure And Functional Dissection Of Pg16, An Antibody 
Wit And Potent Neutralization Of Hiv-1
 pdb|3MME|B  Chain B, Structure And Functional Dissection Of Pg16, An Antibody 
Wit And Potent Neutralization Of Hiv-1
 pdb|3MME|D  Chain D, Structure And Functional Dissection Of Pg16, An Antibody 
Wit And Potent Neutralization Of Hiv-1
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVS RP    NR
Sbjct  52   DVSHRPSGISNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS +SNR
Sbjct  57   PSGISNR  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2871  FCMSLT  2854
             FC SLT
Sbjct  89    FCSSLT  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  968  FCSFLID  948
            FCS L D
Sbjct  89   FCSSLTD  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4419  FCNSL  4405
             FC SL
Sbjct  89    FCSSL  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|3LRS|L  Chain L, Structure Of Pg16, An Antibody With Broad And Potent 
Neutral Hiv-1
 pdb|3LRS|B  Chain B, Structure Of Pg16, An Antibody With Broad And Potent 
Neutral Hiv-1
 pdb|3LRS|D  Chain D, Structure Of Pg16, An Antibody With Broad And Potent 
Neutral Hiv-1
 pdb|3LRS|F  Chain F, Structure Of Pg16, An Antibody With Broad And Potent 
Neutral Hiv-1
Length=211


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  160   GVETTTPS-KQ  169


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVS RP    NR
Sbjct  50   DVSHRPSGISNR  61


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  193   YSCQVTH  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS +SNR
Sbjct  55   PSGISNR  61


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  122  PS----SEELQA--NK-ATLVC  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2871  FCMSLT  2854
             FC SLT
Sbjct  87    FCSSLT  92


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  114   APSVTL  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  968  FCSFLID  948
            FCS L D
Sbjct  87   FCSSLTD  93


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4419  FCNSL  4405
             FC SL
Sbjct  87    FCSSL  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  60    NRFSGSK  66


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  115   PSVTLF  120


>pdb|3LMJ|L  Chain L, Structure Of Human Anti Hiv 21c Fab
 pdb|3LQA|L  Chain L, Crystal Structure Of Clade C Gp120 In Complex With Scd4 
And
Length=217


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  163   GVETTTPS-KQ  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P AAP LL
Sbjct  41   PGAAPKLL  48


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +3

Query  4776  LVITTYWGLHTGE  4814
             L IT   GL+TG+
Sbjct  74    LAIT---GLQTGD  83


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  196   YSCQVTH  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  194   RSYSCQ  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  125  PS----SEELQA--NK-ATLVC  139


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  117   APSVTL  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2321  LLIF  2310
             LLIF
Sbjct  47    LLIF  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  108   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  158

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  159   PVKAGV  164


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  118   PSVTLF  123


>pdb|3GHE|L  Chain L, Crystal Structure Of Anti-Hiv-1 Fab 537-10d In Complex 
With V3 Peptide Mn
Length=217


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  163   GVETTTPS-KQ  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVS RP    NR
Sbjct  52   DVSKRPSGVSNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  196   YSCQVTH  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  194   RSYSCQ  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  1969  SYFDKTSNSPY  1937
             SY   TS  PY
Sbjct  92    SY---TSSTPY  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  125  PS----SEELQA--NK-ATLVC  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  117   APSVTL  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  108   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  158

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  159   PVKAGV  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  118   PSVTLF  123


>gb|ACN63289.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=129


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  7763  KWASLW--NWFN  7792
             KW  LW  NWF+
Sbjct  106   KWEVLWTTNWFD  117


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4142  GATVRAAC  4165
             GA V A C
Sbjct  17    GASVKASC  24


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7282  SGAERKK  7302
             SGAE KK
Sbjct  9     SGAEVKK  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5464  TFYNSNWYKQ  5435
             T Y+ NW  Q
Sbjct  32    TIYDINWVRQ  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7883  VNRVRQ  7900
             +N VRQ
Sbjct  36    INWVRQ  41


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5797  LVEMGVE  5817
             LVE G E
Sbjct  6     LVESGAE  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4792  YVVITNLAS  4766
             Y   TNL S
Sbjct  82    YMELTNLTS  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3753  LTNL  3742
             LTNL
Sbjct  85    LTNL  88


>gb|ACN63272.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=129


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  7763  KWASLW--NWFN  7792
             KW  LW  NWF+
Sbjct  106   KWEVLWTTNWFD  117


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7282  SGAERKK  7302
             SGAE KK
Sbjct  9     SGAEVKK  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5464  TFYNSNWYKQ  5435
             T Y+ NW  Q
Sbjct  32    TIYDINWVRQ  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7883  VNRVRQ  7900
             +N VRQ
Sbjct  36    INWVRQ  41


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4792  YVVITNLAS  4766
             Y   TNL S
Sbjct  82    YMELTNLTS  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3753  LTNL  3742
             LTNL
Sbjct  85    LTNL  88


>pdb|3G04|A  Chain A, Crystal Structure Of The Tsh Receptor In Complex With 
A Thyroid-Stimulating Autoantibody
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = -1

Query  5479  GNESNTFYNS-NWYKQ  5435
             GN SN   N  NWY Q
Sbjct  24    GNSSNIGNNAVNWYQQ  39


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  8900  QPPSISSRGPR  8932
             QPPS+S   PR
Sbjct  6     QPPSVSG-APR  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9010  LPGKSP  8993
             LPGK P
Sbjct  40    LPGKAP  45


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  6529  SSINSTAVKW  6558
             S I   AV W
Sbjct  27    SNIGNNAVNW  36


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  180  SGARTGT  200
            SG R GT
Sbjct  64   SGSRSGT  70


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/33 (33%), Positives = 12/33 (36%), Gaps = 18/33 (54%)
 Frame = +2

Query  7079  PPISG---Q---IRCSSNITGLLLTRDGGNSNN  7159
             P +SG   Q   I CS            GNS N
Sbjct  8     PSVSGAPRQRVTISCS------------GNSSN  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6848  LLFYY  6834
             LL YY
Sbjct  47    LLIYY  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  107   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  157

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  158   PVKAGV  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8168  GDSTNI  8151
             G+S NI
Sbjct  24    GNSSNI  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|3H0T|A  Chain A, Hepcidin-Fab Complex
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = -1

Query  4180  DSRPPTGGPNRSTGEI  4133
             DS  P G P+R  G I
Sbjct  52    DSQRPSGVPDRFSGSI  67


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3835  SPITVIF  3815
             SP TVI+
Sbjct  44    SPTTVIY  50


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  193   RSYSCQ  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6644  VEINCTR  6664
             V I CTR
Sbjct  18    VTISCTR  24


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  7479  TVSCNRCCCASIA  7441
             T+SC R    SIA
Sbjct  19    TISCTR-SSGSIA  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  107   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  157

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  158   PVKAGV  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4150  RSTGEIA  4130
             RS G IA
Sbjct  24    RSSGSIA  30


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6159  FKLTQ  6145
             F LTQ
Sbjct  2     FMLTQ  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  580  TVLYND  563
            TV Y D
Sbjct  47   TVIYED  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|3G6D|L  Chain L, Crystal Structure Of The Complex Between Cnto607 Fab 
And Il- 13
 pdb|3G6A|L  Chain L, Crystal Structure Of Anti-Il-13 Antibody Cnto607
 pdb|3G6A|A  Chain A, Crystal Structure Of Anti-Il-13 Antibody Cnto607
Length=213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  159   GVETTTPS-KQ  168


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  6     QPPSVS  11


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  73    TISGTQAED  81


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  192   YSCQVTH  198


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3715  FVCWY  3701
             FV WY
Sbjct  31    FVSWY  35


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  190   RSYSCQ  195


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  121  PS----SEELQA--NK-ATLVC  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             E TQ PS
Sbjct  3     ELTQPPS  9


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3393  GSFSNWYH  3370
             G F  WY+
Sbjct  29    GTFVSWYQ  36


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  113   APSVTL  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  2615  QNPDIVIYQYMDD  2653
             Q P  VIY   DD
Sbjct  41    QAPVLVIY---DD  50


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2819  VLSIYQD  2799
             VL IY D
Sbjct  44    VLVIYDD  50


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5272  SGSHNKNSAT  5301
             SGS   N AT
Sbjct  62    SGSNSGNTAT  71


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  104   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  154

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  155   PVKAGV  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  172  SLAVAPEQ  195
            S  VAP Q
Sbjct  9    SVSVAPGQ  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  114   PSVTLF  119


>pdb|3GBM|L  Chain L, Crystal Structure Of Fab Cr6261 In Complex With A H5n1 
Influenza Virus Hemagglutinin.
 pdb|3GBM|M  Chain M, Crystal Structure Of Fab Cr6261 In Complex With A H5n1 
Influenza Virus Hemagglutinin.
Length=221


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  167   GVETTTPS-KQ  176


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  200   YSCQVTH  206


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  198   RSYSCQ  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  129  PS----SEELQA--NK-ATLVC  143


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +3

Query  4776  LVITTYWGLHTGE  4814
             L IT   GL+TG+
Sbjct  74    LGIT---GLQTGD  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  121   APSVTL  126


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  41   PGTAPKLL  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  122   PSVTLF  127


>emb|CAR62751.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=117


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  4543  VTIILYYY  4520
             V I+LYYY
Sbjct  104   VAIVLYYY  111


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  818  LFYYFY  801
            L+YY+Y
Sbjct  108  LYYYYY  113


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3971  YNLVAI  3954
             Y LVAI
Sbjct  101   YGLVAI  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  70    ISRDNSKNTL  79


 Score = 16.3 bits (31),  Expect(2) = 30438
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4894  ASSGST  4877
             A SGST
Sbjct  23    AASGST  28


 Score = 16.3 bits (31),  Expect(2) = 30438
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4850  FYGDS  4836
             FY DS
Sbjct  59    FYADS  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +2

Query  2627  IVIYQY---MD  2650
             IV Y Y   MD
Sbjct  106   IVLY-YYYYMD  115


>pdb|3C2A|L  Chain L, Antibody Fab Fragment 447-52d In Complex With Ug1033 
Peptide
 pdb|3C2A|M  Chain M, Antibody Fab Fragment 447-52d In Complex With Ug1033 
Peptide
 pdb|3GHB|L  Chain L, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex 
With V3 Peptide W2rw020
 pdb|3GHB|M  Chain M, Crystal Structure Of Anti-Hiv-1 Fab 447-52d In Complex 
With V3 Peptide W2rw020
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  163   GVETTTPS-KQ  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5446  WYKQF  5432
             WY QF
Sbjct  36    WYQQF  40


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  196   YSCQVTH  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  194   RSYSCQ  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4049  ETGQETAYF  4075
             +TG E  YF
Sbjct  80    QTGDEADYF  88


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  125  PS----SEELQA--NK-ATLVC  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +3

Query  4776  LVITTYWGLHTGE  4814
             L IT   GL+TG+
Sbjct  74    LGIT---GLQTGD  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5422  SQPKTA  5439
             SQPK A
Sbjct  112   SQPKAA  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  117   APSVTL  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  108   LTVLSQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  158

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  159   PVKAGV  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  41   PGTAPKLL  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  118   PSVTLF  123


>gb|ACA28842.1|  T cell receptor variable beta 2 chain [Homo sapiens]
Length=312


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  6999  EVTQSPSH  7022
             EVTQ PSH
Sbjct  22    EVTQTPSH  29


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  132  VVEDLNKVFPPEV  144


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  507  RQILGQ  524
            RQILGQ
Sbjct  55   RQILGQ  60


 Score = 19.3 bits (38),  Expect(2) =  2597
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4124  NGSNFT  4141
             +GSNFT
Sbjct  90    DGSNFT  95


 Score = 17.6 bits (34),  Expect(2) =  2597
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  132   VVEDLNK  138


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2733  PHLN--RCCLSS  2704
             P LN  R CLSS
Sbjct  200   PALNDSRYCLSS  211


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  184   EVHSG------VSTDPQP  195


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  236   LSENDEWT  243


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2640  NTWMIC  2657
             +TW++C
Sbjct  2     DTWLVC  7


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  150   SEAEIS  155


 Score = 17.2 bits (33),  Expect(2) = 21034
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  6548  LLNGSLAEEEV  6580
             LL   L E EV
Sbjct  13    LLKAGLTEPEV  23


 Score = 15.5 bits (29),  Expect(2) = 21034
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             +EV+ R V
Sbjct  36    QEVILRCV  43


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  583  ATVLY  569
            AT+LY
Sbjct  278  ATILY  282


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6442  RKTSRG  6425
             RK SRG
Sbjct  307   RKDSRG  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  708  SNQVSQ  725
            S QV Q
Sbjct  28   SHQVTQ  33


>ref|NP_055022.2|  T-cell surface glycoprotein CD5 precursor [Homo sapiens]
Length=495

 GENE ID: 921 CD5 | CD5 molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  1692  PEPTAPP  1712
             PEPTAPP
Sbjct  151   PEPTAPP  157


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  2138  LALILLV  2118
             LAL+LLV
Sbjct  385   LALVLLV  391


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3604  RNHSSTTRS  3630
             RNH  T RS
Sbjct  431   RNHTATVRS  439


 Score = 18.5 bits (36),  Expect(2) =  2303
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3480  PLLVTY  3463
             P LVTY
Sbjct  94    PFLVTY  99


 Score = 18.5 bits (36),  Expect(2) =  2303
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3396  MGSFSN  3379
             +GSFSN
Sbjct  111   LGSFSN  116


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5446  NCYCKK  5463
             N YCKK
Sbjct  357   NSYCKK  362


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5831  LLGML  5845
             LLGML
Sbjct  14    LLGML  18


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7596  LGMLV  7610
             LGMLV
Sbjct  15    LGMLV  19


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 8/22 (36%)
 Frame = +3

Query  1689  RPEPTAPPEESFRSGVETTTPP  1754
             RP PT  P        E T PP
Sbjct  144   RPPPTTTP--------EPTAPP  157


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8240  EGTDRVIEVVQGA  8278
             EGT   +EV QGA
Sbjct  286   EGT---VEVRQGA  295


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5374  LALLC  5360
             LALLC
Sbjct  263   LALLC  267


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6044  FLSHLP  6027
             FL HLP
Sbjct  209   FLKHLP  214


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2728  PQQMLSQ  2708
             P+Q LSQ
Sbjct  343   PHQKLSQ  349


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 11/29 (37%)
 Frame = -3

Query  3101  GLAP---ASVFLLLSLLMGHNTLHVLVLL  3024
             GLA    AS+ L L LL         VLL
Sbjct  374   GLAAGTVASIILALVLLV--------VLL  394


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2535  MCFHRD  2552
             M FHR+
Sbjct  427   MSFHRN  432


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2378  PHPAGL  2395
             P PAGL
Sbjct  370   PNPAGL  375


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8736  LALVCS  8719
             LAL CS
Sbjct  263   LALLCS  268


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2417  VLDVGD  2434
             VLD GD
Sbjct  329   VLDAGD  334


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  9153  ASIKLAL  9173
             ASI LAL
Sbjct  381   ASIILAL  387


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7010  LCHFLQC  6990
             LC  LQC
Sbjct  200   LCNNLQC  206


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1442  LAHCF  1428
             L HCF
Sbjct  247   LEHCF  251


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1650  ARSSL  1636
             ARSSL
Sbjct  306   ARSSL  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  4830  PNASLFLLYADPNML  4786
             P A L+LL     ML
Sbjct  8     PLATLYLL----GML  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  583  QPSIVC  600
            Q SI+C
Sbjct  102  QSSIIC  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2573  ILLVIL  2556
             +LLV+L
Sbjct  388   VLLVVL  393


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4316  ILPFVLL  4296
             IL  VLL
Sbjct  384   ILALVLL  390


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  4835  GSLHR--ME  4855
             G LHR  M+
Sbjct  470   GALHRSSMQ  478


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6687  ESVSREDQ  6710
             E V RE Q
Sbjct  313   EEVCREQQ  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  588  LYCVHQ  605
            L+C HQ
Sbjct  340  LFCPHQ  345


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3766  PDSSTD  3749
             PD S D
Sbjct  479   PDNSSD  484


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5386  LAPFL  5372
             L PFL
Sbjct  92    LGPFL  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7382  TVQARQ  7399
             TV+ RQ
Sbjct  288   TVEVRQ  293


>pdb|2JB5|L  Chain L, Fab Fragment In Complex With Small Molecule Hapten, 
Crystal Form-1
 pdb|2JB6|A  Chain A, Fab Fragment In Complex With Small Molecule Hapten, 
Crystal Form-2
 pdb|2JB6|L  Chain L, Fab Fragment In Complex With Small Molecule Hapten, 
Crystal Form-2
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  163   GVETTTPS-KQ  172


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3724  SNSFVCWY  3701
             SN +V WY
Sbjct  31    SNNYVSWY  38


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  196   YSCQVTH  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  194   RSYSCQ  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  125  PS----SEELQA--NK-ATLVC  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  117   APSVTL  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2059  SSNYV  2045
             S NYV
Sbjct  31    SNNYV  35


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  108   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  158

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  159   PVKAGV  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  118   PSVTLF  123


>ref|NP_619727.2|  nuclear factor of activated T-cells 5 isoform b [Homo sapiens]
Length=1549

 GENE ID: 10725 NFAT5 | nuclear factor of activated T-cells 5,
tonicity-responsive [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -3

Query  2894  PNSISPL--TS  2868
             PNSISPL  TS
Sbjct  1182  PNSISPLQSTS  1192


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2074  LSQQISSN  2051
             L QQISSN
Sbjct  771   LQQQISSN  778


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  2613  FLKGSK-IF  2590
             FLKG K IF
Sbjct  488   FLKGTKVIF  496


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  7415  VQQQNNLLRAIEAQQHL  7465
             VQQ        EAQQ+L
Sbjct  816   VQQ------VLEAQQQL  826


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  2208  QISTNAFIFSSVN  2170
             QIS N  IF S N
Sbjct  774   QISSN--IFPSPN  784


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query  1089  LSSILF-VPEG  1060
             LSS+LF  P+G
Sbjct  826   LSSVLFSAPDG  836


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5545  FVAVSASS  5522
             F AVSASS
Sbjct  707   FPAVSASS  714


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1059  TLQEQI  1076
             TLQ+QI
Sbjct  770   TLQQQI  775


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1671  GNFLQ  1685
             GNFLQ
Sbjct  1076  GNFLQ  1080


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  7466  LQLTVWGIKQLQA  7504
             LQ T   I QLQA
Sbjct  789   LQNT---IQQLQA  798


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  2850  QL---SFSGST  2827
             QL   SF GST
Sbjct  795   QLQAGSFTGST  805


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5988  PVYPQT  6005
             PVY QT
Sbjct  948   PVYQQT  953


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 17/30 (56%)
 Frame = +3

Query  846  MFSALSEGATPQDLNTMLNTVGGHQAAMQM  935
            M SALS   T +D              MQM
Sbjct  956  MMSALS---TNED--------------MQM  968


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6481  TMYKCQHS  6504
             TM+  QHS
Sbjct  1248  TMFQSQHS  1255


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3442  LPVSCPIYI  3416
             LPVS  IY+
Sbjct  536   LPVSVGIYV  544


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4588  IIPNDL  4571
             IIPN L
Sbjct  605   IIPNAL  610


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  6928  ITVEKFPSTI-KT  6893
             +T EK  STI KT
Sbjct  630   VTAEKRSSTIFKT  642


 Score = 16.8 bits (32),  Expect(2) = 13457
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1690  DQSQQPHQ  1713
             +Q Q P+Q
Sbjct  1217  EQAQPPQQ  1224


 Score = 15.5 bits (29),  Expect(2) = 13457
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1745  NSPSE  1759
             NSPS+
Sbjct  1262  NSPSQ  1266


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4201  LQSPKS  4218
             L+SPKS
Sbjct  15    LESPKS  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8124  RSSTI  8110
             RSSTI
Sbjct  635   RSSTI  639


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4548  FMSLLS  4531
             F SLLS
Sbjct  5     FISLLS  10


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3900  LSQLAT  3883
             LSQL T
Sbjct  255   LSQLTT  260


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1038  DIAGTT  1055
             DI GTT
Sbjct  379   DIEGTT  384


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  4056  PVSAGI---TSA  4030
             PVS GI   T A
Sbjct  537   PVSVGIYVVTNA  548


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 32/52 (61%)
 Frame = +1

Query  8407  ELSQQQIGWEQH--LETWKNMEQSQ----------------VA-----IQQL  8493
             E SQQQ    Q+  L+     EQ Q                V      IQQL
Sbjct  754   EASQQQ----QQSPLQ-----EQAQTLQQQISSNIFPSPNSVSQLQNTIQQL  796


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1665  RPGNFLQSRPE  1697
             RP N L  R E
Sbjct  874   RPDNLLPGRAE  884


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2096  PISPIET  2116
             PIS I+T
Sbjct  1205  PISHIQT  1211


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3311  NTLSTM  3294
             NT+ TM
Sbjct  1292  NTMATM  1297


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  391   IFSHRSNSPPLN  356
             IF + SN  P+N
Sbjct  1326  IFHQQSNMAPMN  1337


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2261  MDFQAQ  2244
             M FQ Q
Sbjct  1343  MQFQSQ  1348


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6526  ASSIN  6540
             ASSIN
Sbjct  1520  ASSIN  1524


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7397  QLLSGIVQQQ  7426
             QL S  VQQ+
Sbjct  141   QLTSNTVQQH  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  2952  VP--LR-SLHNC  2926
             VP  L  SLH C
Sbjct  462   VPEILKKSLHSC  473


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1568  LFPRGPAISG  1539
             LF   PA+SG
Sbjct  972   LFSSPPAVSG  981


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4836  PDPNASLF  4813
             P P A LF
Sbjct  1433  PQPQATLF  1440


 Score = 15.1 bits (28),  Expect(2) = 31174
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4890  LADQL  4904
             L DQL
Sbjct  1484  LPDQL  1488


 Score = 15.1 bits (28),  Expect(2) = 31174
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4972  LALGVNIKQDI  5004
             LA  +N  Q+I
Sbjct  1519  LASSINTNQNI  1529


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3839  MASDF  3853
             M SDF
Sbjct  1     MPSDF  5


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6582  TTSSS  6568
             TTSSS
Sbjct  103   TTSSS  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8053  EPVPLQ  8070
             EPV LQ
Sbjct  341   EPVVLQ  346


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5841  IPRSMV  5824
             IP SM+
Sbjct  615   IPSSMI  620


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             QT  LQ QI
Sbjct  769   QT--LQQQI  775


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7709  QLRSVL  7692
             QL SVL
Sbjct  825   QLSSVL  830


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQT+
Sbjct  1022  VFQTM  1026


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8902  LSNLHSNT  8879
             + NL+ NT
Sbjct  1165  MNNLQTNT  1172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8128  SQKFH  8114
             SQ FH
Sbjct  32    SQNFH  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6449  LESQNQP  6429
             LE +N+P
Sbjct  336   LEGHNEP  342


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1618  RDRLIF  1635
             R RL+F
Sbjct  428   RARLVF  433


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4278  RLNILR  4295
             R NI+R
Sbjct  434   RVNIMR  439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1770  IDKELY  1787
             ID EL+
Sbjct  512   IDMELF  517


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4317  SSTILK  4334
             SSTI K
Sbjct  636   SSTIFK  641


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  819  KAFSPE  836
            KA+ PE
Sbjct  686  KAYNPE  691


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4918  TLTVFQT  4938
             TLT  QT
Sbjct  692   TLTTIQT  698


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3014  REIL  3025
             REIL
Sbjct  737   REIL  740


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  4127  GSNFTGAT  4150
             GS FTG T
Sbjct  799   GS-FTGST  805


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3150  ENMQE  3164
             EN QE
Sbjct  838   ENVQE  842


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5554  QNSQTHQ  5574
             QNS T+Q
Sbjct  1052  QNSGTQQ  1058


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7086  MGGAYIAFPT  7057
             MGGA   F T
Sbjct  95    MGGACSSFTT  104


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2561  SPAIFQSSMT  2590
             SP I+  S T
Sbjct  107   SPTIYSTSVT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1407  HKARVLAE  1430
             H AR L E
Sbjct  310   HRARYLTE  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8953  RTADIE  8970
             R AD+E
Sbjct  409   RNADVE  414


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2555  KGSPAIFQ  2578
             KG   IFQ
Sbjct  490   KGTKVIFQ  497


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8721  YTPGP  8735
             YTP P
Sbjct  559   YTPDP  563


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2601  SLLENKIQ  2624
             S L+N IQ
Sbjct  787   SQLQNTIQ  794


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6452  ILESQNQ  6432
             +LE Q Q
Sbjct  819   VLEAQQQ  825


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4805  MQTPIC  4788
             MQ  IC
Sbjct  918   MQQSIC  923


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4598  SVFHNP  4581
             S FH P
Sbjct  1109  SLFHSP  1114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4485  DQQS  4496
             DQQS
Sbjct  1152  DQQS  1155


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  4823  PVSFSCMQTPI  4791
             P S S +QT I
Sbjct  1396  PASMSALQTSI  1406


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4395  SVAIMS  4378
             SVA MS
Sbjct  62    SVASMS  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6857  QSSGGD-----PEIV  6886
             Q SGG+     P +V
Sbjct  68    QTSGGEAGSPPPAVV  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2609  RKQNP  2623
             RK NP
Sbjct  220   RKRNP  224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8342  LIAKSF  8325
             LI K F
Sbjct  483   LIGKNF  488


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7199  DNWRSE  7216
             + W SE
Sbjct  504   NSWKSE  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8345  HLIAK  8331
             HLI K
Sbjct  521   HLIVK  525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7863  TILKPTK  7843
             TI K TK
Sbjct  638   TIFKTTK  644


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6979  FSTPS  6965
             FS PS
Sbjct  665   FSSPS  669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1000  LLHQA  1014
             LL+QA
Sbjct  722   LLQQA  726


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 0/15 (0%)
 Frame = +3

Query  6660  QDPTTIQEKESVSRE  6704
             Q  T  Q  E  SRE
Sbjct  724   QQATQFQTRETQSRE  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6068  MVEQMHEDI  6094
             MV +M++ I
Sbjct  914   MVMEMQQSI  922


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6938  LFNST  6952
             LF ST
Sbjct  1041  LFSST  1045


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7418  QQQNN  7432
             QQQ N
Sbjct  1057  QQQGN  1061


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  688   QQLTQDT  708
             Q L Q+T
Sbjct  1100  QNLSQET  1106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2028  TNTV  2017
             TNTV
Sbjct  1170  TNTV  1173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8467  QSQVAIQQLP  8496
             Q QVA   LP
Sbjct  1228  QPQVALGSLP  1237


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  973   SHSAASSL  950
             S+S  SSL
Sbjct  1347  SQSTVSSL  1354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4198  SLQSP  4212
             SLQ P
Sbjct  1353  SLQNP  1357


>pdb|2PGV|A  Chain A, Gtb C209a
 pdb|2PGY|A  Chain A, Gtb C209a, No Hg
Length=292


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = +2

Query  7508  ILAVERYLKDQQLLGIW  7558
             +L  E YL DQQLLG W
Sbjct  256   VLSPE-YLWDQQLLG-W  270


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2273  VFAIKK  2290
             VFAIKK
Sbjct  58    VFAIKK  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -3

Query  2774  MEVLSDVFC  2748
             ME  SD FC
Sbjct  127   MEMISD-FC  134


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  1107  VGEIYKRW  1130
             VG  YKRW
Sbjct  113   VGA-YKRW  119


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 14/25 (56%)
 Frame = +2

Query  2453  LDEDFR--------------KYTAF  2485
             L+E FR              KY AF
Sbjct  43    LNEQFRLQNTTIGLTVFAIKKYVAF  67


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5408  GSIQEV  5425
             GS+QEV
Sbjct  210   GSVQEV  215


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  4862  LF----PPFYGDS  4836
             LF    P FYG S
Sbjct  166   LFGTLHPSFYGSS  178


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  2594  IL-EPFRKQN  2620
             IL E FR QN
Sbjct  42    ILNEQFRLQN  51


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +2

Query  2417  VLDVGDAY  2440
             VL+VG AY
Sbjct  110   VLEVG-AY  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1345  WDQRL  1359
             WDQ L
Sbjct  263   WDQQL  267


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4461  TAEIHF  4478
             TAE HF
Sbjct  74    TAEKHF  79


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  2719  SV-EVGTY  2739
             SV EVG Y
Sbjct  109   SVLEVGAY  116


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  1174  VGLYILTILF  1145
             VG  ILT LF
Sbjct  158   VGVEILTPLF  167


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8376  GWPTV  8390
             GWP V
Sbjct  269   GWPAV  273


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  299  PKILT  313
            PK+LT
Sbjct  12   PKVLT  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  7466  LQ-----LTVWGIK  7492
             LQ     LTV  IK
Sbjct  49    LQNTTIGLTVFAIK  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4746  LNLFLD  4729
             L LFL+
Sbjct  68    LKLFLE  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2803  RMEFI  2789
             RME I
Sbjct  126   RMEMI  130


 Score = 15.5 bits (29),  Expect(2) = 54731
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1212  FRDYV  1226
             FRD V
Sbjct  154   FRDHV  158


 Score = 15.1 bits (28),  Expect(2) = 54731
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1250  SRASFT  1267
             SR  FT
Sbjct  178   SREAFT  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  2533  VLISNPWCL--IV  2501
             VL+  PW L  IV
Sbjct  22    VLVVTPW-LAPIV  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  884  ILWGGSF  864
            I W G F
Sbjct  32   IVWEGTF  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  486  LETSE  500
            LET E
Sbjct  72   LETAE  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1523  QRRAHSQ  1543
             +RR +SQ
Sbjct  185   ERRPQSQ  191


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1500  SFFGS  1486
             SF+GS
Sbjct  173   SFYGS  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8416  QQQIGW  8433
             QQ  GW
Sbjct  265   QQLLGW  270


>pdb|2OLD|A  Chain A, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P3(2)21 Crystal Form
 pdb|2OLD|B  Chain B, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P3(2)21 Crystal Form
 pdb|2OMB|A  Chain A, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P3(1)21 Crystal Form
 pdb|2OMB|B  Chain B, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P3(1)21 Crystal Form
 pdb|2OMB|C  Chain C, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P3(1)21 Crystal Form
 pdb|2OMB|D  Chain D, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P3(1)21 Crystal Form
 pdb|2OMN|A  Chain A, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P4(3)2(1)2 Crystal Form
 pdb|2OMN|B  Chain B, Bence Jones Kwr Protein- Immunoglobulin Light Chain 
Dimer, P4(3)2(1)2 Crystal Form
Length=217


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  163   GVETTTPS-KQ  172


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  196   YSCQVTH  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  194   RSYSCQ  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  125  PS----SEELQA--NK-ATLVC  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VS+R
Sbjct  57   PSGVSDR  63


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  496  DVSNRP  479
            +V NRP
Sbjct  52   EVTNRP  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  117   APSVTL  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  108   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  158

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  159   PVKAGV  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  118   PSVTLF  123


>ref|NP_001124183.1|  C-type lectin domain family 2 member A [Homo sapiens]
Length=174

 GENE ID: 387836 CLEC2A | C-type lectin domain family 2, member A [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -1

Query  1471  CIIMVAEFVTW  1439
             CIIM+A   TW
Sbjct  42    CIIMIA---TW  49


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4699  GFIDI  4713
             GFIDI
Sbjct  159   GFIDI  163


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +1

Query  4696  DGFID-ITMKALIQ  4734
             DGFI  I  K LIQ
Sbjct  12    DGFIHRIVPK-LIQ  24


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8459  TWSNH  8473
             TWS H
Sbjct  48    TWSKH  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7648  RVIPNLFQ  7625
             R++P L Q
Sbjct  17    RIVPKLIQ  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  861  IMLKTW  844
            IM  TW
Sbjct  44   IMIATW  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7437  SKLFC  7423
             SK FC
Sbjct  82    SKIFC  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1640  EDLAFL  1657
             ED+ FL
Sbjct  100   EDMEFL  105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3147  QENMQ  3161
             QE+M+
Sbjct  99    QEDME  103


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  372  ILPRLI  355
            I P LI
Sbjct  18   IVPKLI  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8662  KISLIC  8679
             KI L C
Sbjct  27    KIGLMC  32


>ref|NP_000601.3|  CD44 antigen isoform 1 precursor [Homo sapiens]
Length=742

 GENE ID: 960 CD44 | CD44 molecule (Indian blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  2014  RYSISRT  2034
             RYSISRT
Sbjct  41    RYSISRT  47


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  2850  QLSFSGSTI  2824
             +LSFSGS I
Sbjct  289   HLSFSGSGI  297


 Score = 19.3 bits (38),  Expect(2) =  1327
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8647  TPKED  8661
             TPKED
Sbjct  415   TPKED  419


 Score = 18.5 bits (36),  Expect(2) =  1327
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +3

Query  8517  EAQEEEEVGFPVTPQ  8561
             E +EEEE     TP+
Sbjct  371   EHHEEEE-----TPH  380


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  6326  NDTTSYKLTSCNTS  6367
             N+T  Y LTS NTS
Sbjct  100   NNTGVYILTS-NTS  112


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1704  APPEE  1718
             APPEE
Sbjct  123   APPEE  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -1

Query  8287  SSTSSLYYFY-----NPI  8249
             SSTS  Y FY      PI
Sbjct  187   SSTSGGYIFYTFSTVHPI  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4286  HLKTAVQMA  4312
             HL T  QMA
Sbjct  257   HLHTTTQMA  265


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4812  ERDWHL  4829
             ERD HL
Sbjct  285   ERDRHL  290


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3702  YQHTKE  3719
             Y HTKE
Sbjct  564   YPHTKE  569


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3837  QWLVIL  3854
             +WL+IL
Sbjct  649   EWLIIL  654


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  752  GANGTSGHI  778
            GAN TSG I
Sbjct  634  GANTTSGPI  642


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1171  GLYILT  1154
             G YILT
Sbjct  103   GVYILT  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  826  KAFSST  809
            KAF ST
Sbjct  54   KAFNST  59


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1902  SSNTVS  1885
             SSNT+S
Sbjct  268   SSNTIS  273


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8263  FYNPI  8249
             F+NPI
Sbjct  453   FFNPI  457


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  3230  FLWLFFALP  3204
             F WLF  LP
Sbjct  245   FSWLF--LP  251


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -3

Query  5360  SSNAYSAMSTPNSEN  5316
             SSN  SA   PN EN
Sbjct  268   SSNTISAGWEPNEEN  282


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2834  PEKDSWT  2854
             PE  SWT
Sbjct  445   PEDSSWT  451


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8174  TVGDS  8160
             TVGDS
Sbjct  590   TVGDS  594


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5071  GGFIFF  5054
             GG+IF+
Sbjct  191   GGYIFY  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7567  RATPNPQE  7544
             R TP P++
Sbjct  440   RTTPSPED  447


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2430  PTSSTVT  2410
             PT ST T
Sbjct  527   PTTSTLT  533


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2562  DPFHPCG  2542
             D FHP G
Sbjct  607   DTFHPSG  613


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  221  LVSLSL  204
            LV LSL
Sbjct  14   LVPLSL  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4125  LSVCI  4111
             L VCI
Sbjct  664   LAVCI  668


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2900  DLPN  2889
             DLPN
Sbjct  134   DLPN  137


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5819  ISTPIST  5799
             IS  IST
Sbjct  304   ISSTIST  310


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  731  VILADLIA  708
            +ILA L A
Sbjct  652  IILASLLA  659


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             TL TM
Sbjct  59    TLPTM  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6102  KLIISS  6085
             KL+I S
Sbjct  681   KLVINS  686


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  3762  IPALTNLST  3736
             IPA T +ST
Sbjct  219   IPATTLMST  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  8893  LHSNTSLSGSS  8861
             LH  T + G S
Sbjct  258   LHTTTQMAGTS  268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1409  MAGSS  1395
             MAG S
Sbjct  264   MAGTS  268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6326  NDTTSY  6343
             N TT Y
Sbjct  350   NGTTAY  355


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5994  YPQTP  6008
             Y QTP
Sbjct  412   YRQTP  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5513  PMAGR  5527
             PM GR
Sbjct  436   PMQGR  440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3113  DMSIG  3099
             DM IG
Sbjct  737   DMKIG  741


>ref|NP_001001389.1|  CD44 antigen isoform 2 precursor [Homo sapiens]
Length=699

 GENE ID: 960 CD44 | CD44 molecule (Indian blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  2014  RYSISRT  2034
             RYSISRT
Sbjct  41    RYSISRT  47


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  2850  QLSFSGSTI  2824
             +LSFSGS I
Sbjct  246   HLSFSGSGI  254


 Score = 19.3 bits (38),  Expect(2) =  1353
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8647  TPKED  8661
             TPKED
Sbjct  372   TPKED  376


 Score = 18.5 bits (36),  Expect(2) =  1353
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +3

Query  8517  EAQEEEEVGFPVTPQ  8561
             E +EEEE     TP+
Sbjct  328   EHHEEEE-----TPH  337


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  6326  NDTTSYKLTSCNTS  6367
             N+T  Y LTS NTS
Sbjct  100   NNTGVYILTS-NTS  112


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1704  APPEE  1718
             APPEE
Sbjct  123   APPEE  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -1

Query  8287  SSTSSLYYFY-----NPI  8249
             SSTS  Y FY      PI
Sbjct  187   SSTSGGYIFYTFSTVHPI  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4812  ERDWHL  4829
             ERD HL
Sbjct  242   ERDRHL  247


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3702  YQHTKE  3719
             Y HTKE
Sbjct  521   YPHTKE  526


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3837  QWLVIL  3854
             +WL+IL
Sbjct  606   EWLIIL  611


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  752  GANGTSGHI  778
            GAN TSG I
Sbjct  591  GANTTSGPI  599


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1171  GLYILT  1154
             G YILT
Sbjct  103   GVYILT  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  826  KAFSST  809
            KAF ST
Sbjct  54   KAFNST  59


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1902  SSNTVS  1885
             SSNT+S
Sbjct  225   SSNTIS  230


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8263  FYNPI  8249
             F+NPI
Sbjct  410   FFNPI  414


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -3

Query  5360  SSNAYSAMSTPNSEN  5316
             SSN  SA   PN EN
Sbjct  225   SSNTISAGWEPNEEN  239


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2834  PEKDSWT  2854
             PE  SWT
Sbjct  402   PEDSSWT  408


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8174  TVGDS  8160
             TVGDS
Sbjct  547   TVGDS  551


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5071  GGFIFF  5054
             GG+IF+
Sbjct  191   GGYIFY  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7567  RATPNPQE  7544
             R TP P++
Sbjct  397   RTTPSPED  404


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2430  PTSSTVT  2410
             PT ST T
Sbjct  484   PTTSTLT  490


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2562  DPFHPCG  2542
             D FHP G
Sbjct  564   DTFHPSG  570


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  221  LVSLSL  204
            LV LSL
Sbjct  14   LVPLSL  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4125  LSVCI  4111
             L VCI
Sbjct  621   LAVCI  625


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2900  DLPN  2889
             DLPN
Sbjct  134   DLPN  137


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5819  ISTPIST  5799
             IS  IST
Sbjct  261   ISSTIST  267


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  731  VILADLIA  708
            +ILA L A
Sbjct  609  IILASLLA  616


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             TL TM
Sbjct  59    TLPTM  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6102  KLIISS  6085
             KL+I S
Sbjct  638   KLVINS  643


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6326  NDTTSY  6343
             N TT Y
Sbjct  307   NGTTAY  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5994  YPQTP  6008
             Y QTP
Sbjct  369   YRQTP  373


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5513  PMAGR  5527
             PM GR
Sbjct  393   PMQGR  397


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3113  DMSIG  3099
             DM IG
Sbjct  694   DMKIG  698


>sp|Q9P126.2|CLC1B_HUMAN  RecName: Full=C-type lectin domain family 1 member B; AltName: 
Full=C-type lectin-like receptor 2; Short=CLEC-2
Length=229

 GENE ID: 51266 CLEC1B | C-type lectin domain family 1, member B [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 8/24 (33%)
 Frame = +3

Query  7590  LCLGMLVGVINLWNRFGITRPGWS  7661
             LC GM VG + L    GI    WS
Sbjct  40    LCVGMVVGLVAL----GI----WS  55


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  2711  RQHLLRW-GL  2737
             R HL RW GL
Sbjct  152   RTHLIRWVGL  161


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1945  NWRFY  1959
             NWR+Y
Sbjct  105   NWRYY  109


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  2138  LALILLV  2118
             +ALILL+
Sbjct  33    MALILLI  39


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1277  KLDDRNLV  1300
             K D+RN V
Sbjct  139   KIDNRNIV  146


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5703  NIKTKK  5720
             NIKT K
Sbjct  11    NIKTRK  16


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3830  WRAMA  3844
             WR MA
Sbjct  30    WRVMA  34


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3403  SYYGFF  3386
             S YGFF
Sbjct  112   SCYGFF  117


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3258  NLNCPY  3275
             N+NC Y
Sbjct  192   NMNCAY  197


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  7820  LFIMIVG---GLVGL  7855
             L I+ VG   GLV L
Sbjct  37    LLILCVGMVVGLVAL  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8352  KWSKSSVI  8375
             KW   SVI
Sbjct  171   KWEDGSVI  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/23 (34%), Positives = 8/23 (34%), Gaps = 14/23 (60%)
 Frame = -2

Query  8331  ILSKPCLIL----------LGMW  8293
             IL    LIL          LG W
Sbjct  36    IL----LILCVGMVVGLVALGIW  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8534  LLLLC  8520
             LL LC
Sbjct  37    LLILC  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  2270  EYCMDFQAQFLK  2235
             +YC D  A  LK
Sbjct  128   QYCTDMNATLLK  139


>ref|NP_001106649.1|  nuclear factor of activated T-cells 5 isoform d [Homo sapiens]
Length=1548

 GENE ID: 10725 NFAT5 | nuclear factor of activated T-cells 5,
tonicity-responsive [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -3

Query  2894  PNSISPL--TS  2868
             PNSISPL  TS
Sbjct  1181  PNSISPLQSTS  1191


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2074  LSQQISSN  2051
             L QQISSN
Sbjct  770   LQQQISSN  777


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  2613  FLKGSK-IF  2590
             FLKG K IF
Sbjct  488   FLKGTKVIF  496


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  7415  VQQQNNLLRAIEAQQHL  7465
             VQQ        EAQQ+L
Sbjct  815   VQQ------VLEAQQQL  825


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  2208  QISTNAFIFSSVN  2170
             QIS N  IF S N
Sbjct  773   QISSN--IFPSPN  783


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query  1089  LSSILF-VPEG  1060
             LSS+LF  P+G
Sbjct  825   LSSVLFSAPDG  835


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5545  FVAVSASS  5522
             F AVSASS
Sbjct  706   FPAVSASS  713


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1059  TLQEQI  1076
             TLQ+QI
Sbjct  769   TLQQQI  774


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1671  GNFLQ  1685
             GNFLQ
Sbjct  1075  GNFLQ  1079


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  7466  LQLTVWGIKQLQA  7504
             LQ T   I QLQA
Sbjct  788   LQNT---IQQLQA  797


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  2850  QL---SFSGST  2827
             QL   SF GST
Sbjct  794   QLQAGSFTGST  804


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5988  PVYPQT  6005
             PVY QT
Sbjct  947   PVYQQT  952


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 17/30 (56%)
 Frame = +3

Query  846  MFSALSEGATPQDLNTMLNTVGGHQAAMQM  935
            M SALS   T +D              MQM
Sbjct  955  MMSALS---TNED--------------MQM  967


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6481  TMYKCQHS  6504
             TM+  QHS
Sbjct  1247  TMFQSQHS  1254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3442  LPVSCPIYI  3416
             LPVS  IY+
Sbjct  536   LPVSVGIYV  544


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4588  IIPNDL  4571
             IIPN L
Sbjct  604   IIPNAL  609


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  6928  ITVEKFPSTI-KT  6893
             +T EK  STI KT
Sbjct  629   VTAEKRSSTIFKT  641


 Score = 16.8 bits (32),  Expect(2) = 13461
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1690  DQSQQPHQ  1713
             +Q Q P+Q
Sbjct  1216  EQAQPPQQ  1223


 Score = 15.5 bits (29),  Expect(2) = 13461
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1745  NSPSE  1759
             NSPS+
Sbjct  1261  NSPSQ  1265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4201  LQSPKS  4218
             L+SPKS
Sbjct  15    LESPKS  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8124  RSSTI  8110
             RSSTI
Sbjct  634   RSSTI  638


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4548  FMSLLS  4531
             F SLLS
Sbjct  5     FISLLS  10


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3900  LSQLAT  3883
             LSQL T
Sbjct  255   LSQLTT  260


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1038  DIAGTT  1055
             DI GTT
Sbjct  379   DIEGTT  384


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  4056  PVSAGI---TSA  4030
             PVS GI   T A
Sbjct  537   PVSVGIYVVTNA  548


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 32/52 (61%)
 Frame = +1

Query  8407  ELSQQQIGWEQH--LETWKNMEQSQ----------------VA-----IQQL  8493
             E SQQQ    Q+  L+     EQ Q                V      IQQL
Sbjct  753   EASQQQ----QQSPLQ-----EQAQTLQQQISSNIFPSPNSVSQLQNTIQQL  795


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1665  RPGNFLQSRPE  1697
             RP N L  R E
Sbjct  873   RPDNLLPGRAE  883


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2096  PISPIET  2116
             PIS I+T
Sbjct  1204  PISHIQT  1210


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3311  NTLSTM  3294
             NT+ TM
Sbjct  1291  NTMATM  1296


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  391   IFSHRSNSPPLN  356
             IF + SN  P+N
Sbjct  1325  IFHQQSNMAPMN  1336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2261  MDFQAQ  2244
             M FQ Q
Sbjct  1342  MQFQSQ  1347


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6526  ASSIN  6540
             ASSIN
Sbjct  1519  ASSIN  1523


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7397  QLLSGIVQQQ  7426
             QL S  VQQ+
Sbjct  141   QLTSNTVQQH  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  2952  VP--LR-SLHNC  2926
             VP  L  SLH C
Sbjct  462   VPEILKKSLHSC  473


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1568  LFPRGPAISG  1539
             LF   PA+SG
Sbjct  971   LFSSPPAVSG  980


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4836  PDPNASLF  4813
             P P A LF
Sbjct  1432  PQPQATLF  1439


 Score = 15.1 bits (28),  Expect(2) = 31178
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4890  LADQL  4904
             L DQL
Sbjct  1483  LPDQL  1487


 Score = 15.1 bits (28),  Expect(2) = 31178
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4972  LALGVNIKQDI  5004
             LA  +N  Q+I
Sbjct  1518  LASSINTNQNI  1528


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3839  MASDF  3853
             M SDF
Sbjct  1     MPSDF  5


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6582  TTSSS  6568
             TTSSS
Sbjct  103   TTSSS  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8053  EPVPLQ  8070
             EPV LQ
Sbjct  341   EPVVLQ  346


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5841  IPRSMV  5824
             IP SM+
Sbjct  614   IPSSMI  619


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             QT  LQ QI
Sbjct  768   QT--LQQQI  774


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7709  QLRSVL  7692
             QL SVL
Sbjct  824   QLSSVL  829


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQT+
Sbjct  1021  VFQTM  1025


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8902  LSNLHSNT  8879
             + NL+ NT
Sbjct  1164  MNNLQTNT  1171


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8128  SQKFH  8114
             SQ FH
Sbjct  32    SQNFH  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6449  LESQNQP  6429
             LE +N+P
Sbjct  336   LEGHNEP  342


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1618  RDRLIF  1635
             R RL+F
Sbjct  428   RARLVF  433


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4278  RLNILR  4295
             R NI+R
Sbjct  434   RVNIMR  439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1770  IDKELY  1787
             ID EL+
Sbjct  512   IDMELF  517


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4317  SSTILK  4334
             SSTI K
Sbjct  635   SSTIFK  640


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  819  KAFSPE  836
            KA+ PE
Sbjct  685  KAYNPE  690


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4918  TLTVFQT  4938
             TLT  QT
Sbjct  691   TLTTIQT  697


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3014  REIL  3025
             REIL
Sbjct  736   REIL  739


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  4127  GSNFTGAT  4150
             GS FTG T
Sbjct  798   GS-FTGST  804


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3150  ENMQE  3164
             EN QE
Sbjct  837   ENVQE  841


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5554  QNSQTHQ  5574
             QNS T+Q
Sbjct  1051  QNSGTQQ  1057


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7086  MGGAYIAFPT  7057
             MGGA   F T
Sbjct  95    MGGACSSFTT  104


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2561  SPAIFQSSMT  2590
             SP I+  S T
Sbjct  107   SPTIYSTSVT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1407  HKARVLAE  1430
             H AR L E
Sbjct  310   HRARYLTE  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8953  RTADIE  8970
             R AD+E
Sbjct  409   RNADVE  414


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2555  KGSPAIFQ  2578
             KG   IFQ
Sbjct  490   KGTKVIFQ  497


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8721  YTPGP  8735
             YTP P
Sbjct  559   YTPDP  563


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2601  SLLENKIQ  2624
             S L+N IQ
Sbjct  786   SQLQNTIQ  793


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6452  ILESQNQ  6432
             +LE Q Q
Sbjct  818   VLEAQQQ  824


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4805  MQTPIC  4788
             MQ  IC
Sbjct  917   MQQSIC  922


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4598  SVFHNP  4581
             S FH P
Sbjct  1108  SLFHSP  1113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4485  DQQS  4496
             DQQS
Sbjct  1151  DQQS  1154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  4823  PVSFSCMQTPI  4791
             P S S +QT I
Sbjct  1395  PASMSALQTSI  1405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4395  SVAIMS  4378
             SVA MS
Sbjct  62    SVASMS  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6857  QSSGGD-----PEIV  6886
             Q SGG+     P +V
Sbjct  68    QTSGGEAGSPPPAVV  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2609  RKQNP  2623
             RK NP
Sbjct  220   RKRNP  224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8342  LIAKSF  8325
             LI K F
Sbjct  483   LIGKNF  488


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7199  DNWRSE  7216
             + W SE
Sbjct  504   NSWKSE  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8345  HLIAK  8331
             HLI K
Sbjct  521   HLIVK  525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7863  TILKPTK  7843
             TI K TK
Sbjct  637   TIFKTTK  643


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6979  FSTPS  6965
             FS PS
Sbjct  664   FSSPS  668


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1000  LLHQA  1014
             LL+QA
Sbjct  721   LLQQA  725


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 0/15 (0%)
 Frame = +3

Query  6660  QDPTTIQEKESVSRE  6704
             Q  T  Q  E  SRE
Sbjct  723   QQATQFQTRETQSRE  737


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6068  MVEQMHEDI  6094
             MV +M++ I
Sbjct  913   MVMEMQQSI  921


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6938  LFNST  6952
             LF ST
Sbjct  1040  LFSST  1044


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7418  QQQNN  7432
             QQQ N
Sbjct  1056  QQQGN  1060


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  688   QQLTQDT  708
             Q L Q+T
Sbjct  1099  QNLSQET  1105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2028  TNTV  2017
             TNTV
Sbjct  1169  TNTV  1172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8467  QSQVAIQQLP  8496
             Q QVA   LP
Sbjct  1227  QPQVALGSLP  1236


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  973   SHSAASSL  950
             S+S  SSL
Sbjct  1346  SQSTVSSL  1353


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4198  SLQSP  4212
             SLQ P
Sbjct  1352  SLQNP  1356


>ref|NP_115984.3|  neurabin-2 [Homo sapiens]
Length=817

 GENE ID: 84687 PPP1R9B | protein phosphatase 1, regulatory (inhibitor) subunit
9B [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 12/23 (52%), Positives = 13/23 (56%), Gaps = 8/23 (34%)
 Frame = +1

Query  322  LEGERWVRE----R--QY*AGEN  372
            LE ERW RE    R  QY  GE+
Sbjct  599  LEQERWQREMMEQRYAQY--GED  619


 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = +1

Query  8464  EQSQVA--IQQ  8490
             EQS+VA  IQQ
Sbjct  587   EQSEVAQLIQQ  597


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +3

Query  7716  RKTSK-KRMNKNY  7751
             RK SK KR+ K+Y
Sbjct  753   RKYSKAKRLIKDY  765


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +2

Query  1358  YTRRND--DSMSGS  1393
             Y RRN+  D M  S
Sbjct  467   YDRRNEDVDPMAAS  480


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 15/31 (48%)
 Frame = +1

Query  8008  SISERILGTYLGR-------SAEPVPLQLPP  8079
             S+SER+      R       SA+P P   PP
Sbjct  116   SVSERV-----SRFDSKPAPSAQPAP---PP  138


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  255   PPPPPAP  261


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/17 (52%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = -1

Query  5845  QHPKEH-GAPS-PPPSP  5801
             Q+P +H  AP  PPP P
Sbjct  276   QQPPQHRVAPARPPPKP  292


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  286  TGEYA  300
            TGEYA
Sbjct  623  TGEYA  627


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  630  EALDK  644
            EALDK
Sbjct  194  EALDK  198


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  253   PPPPPPP  259


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  4199  PYNPQSQGVVE  4231
             PY P+S G VE
Sbjct  424   PYEPES-GCVE  433


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6190  GISII  6176
             GISII
Sbjct  507   GISII  511


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5534  DSDEEL  5551
             D DEEL
Sbjct  629   DEDEEL  634


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 12/28 (42%)
 Frame = +2

Query  8873  ERSVRVEV*QPPSISSRGPRAASGVLQE  8956
             ER VR       S     PRA S  L E
Sbjct  88    ERGVRL------SL----PRASS--LNE  103


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3128  ALDKFD  3111
             ALDK D
Sbjct  195   ALDKLD  200


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  393  EFFPIDL  373
            E FP++L
Sbjct  493  ELFPVEL  499


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5979  AQTLCTSV  5956
             AQ LC  V
Sbjct  730   AQSLCQAV  737


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7927  PPPNP  7941
             PPP P
Sbjct  136   PPPHP  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3632  SESELVN  3652
             SE +LV+
Sbjct  388   SEADLVD  394


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = -1

Query  1807  DLREVKGYSSL---SIGS  1763
             DL +V  YS L   S GS
Sbjct  391   DLVDVSAYSGLGEDSAGS  408


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6056  WKNDMVEQ  6079
             W  +M EQ
Sbjct  604   WQREMMEQ  611


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5952  MIQRY  5966
             M QRY
Sbjct  609   MEQRY  613


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6629  QLNTSVEIN  6655
             QL  SVE N
Sbjct  708   QLEQSVEEN  716


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4941  QSLKNSQS  4918
             Q L NS S
Sbjct  809   QTLRNSNS  816


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7164  PRSSDLEE  7187
             PR S L E
Sbjct  96    PRASSLNE  103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8892  RFDS  8903
             RFDS
Sbjct  123   RFDS  126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1686  SRPEPTAPP  1712
             S P P A P
Sbjct  126   SKPAPSAQP  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             APS  P P
Sbjct  129   APSAQPAP  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 29/48 (60%)
 Frame = +2

Query  4025  IEAEVIPAETGQETAYFLLKLAGRWPVKTIHT--DNGSNFTGATVRAA  4162
             I+AEV                       T+H   +NGS  T AT  AA
Sbjct  319   IQAEV-----------------------TVHAALENGS--TVAT--AA  339


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3477  EEDKKLSP  3500
             +ED  LSP
Sbjct  629   DEDEELSP  636


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7092  DKLD  7103
             DKLD
Sbjct  197   DKLD  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1699  QQPHQKR  1719
             QQP Q R
Sbjct  276   QQPPQHR  282


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9015  HASLE  9001
             HA LE
Sbjct  326   HAALE  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7339  QEPKEQ  7322
             +EPK Q
Sbjct  344   EEPKAQ  349


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5041  AASAKY  5024
             AASA Y
Sbjct  478   AASAEY  483


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  955  RKLQ  966
            RKLQ
Sbjct  690  RKLQ  693


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1979  DHTVLL  1962
             DH  LL
Sbjct  106   DHSALL  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3551  LQDSGLEV  3574
             LQD  L+V
Sbjct  178   LQDRKLDV  185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7463  DAVAP  7449
             DAV P
Sbjct  202   DAVSP  206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  1540  AVCPSLPQL  1514
             AV P   QL
Sbjct  203   AVSPTVSQL  211


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7263  PPRQRE  7280
             PP  RE
Sbjct  289   PPKPRE  294


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/11 (36%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8784  VEPDKIEEANK  8816
             V P+ ++E  K
Sbjct  374   VAPEEVDESKK  384


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = +1

Query  280  AATGEY--AKNFD*R--RLE  327
            AA  EY   K    R  RLE
Sbjct  478  AASAEYELEK----RVERLE  493


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  365  GRIRSM  382
            GR+R M
Sbjct  574  GRVRFM  579


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  627  KEALDK  644
            KE +DK
Sbjct  791  KEEMDK  796


>ref|NP_065805.2|  rho GTPase-activating protein 31 [Homo sapiens]
Length=1444

 GENE ID: 57514 ARHGAP31 | Rho GTPase activating protein 31 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -1

Query  4465  AVPVINPKI  4439
             AVPVI PKI
Sbjct  1199  AVPVIPPKI  1207


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  2430  PTSSTVTD  2407
             P SSTVTD
Sbjct  1361  PPSSTVTD  1368


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5224  MEPNPR  5207
             MEP PR
Sbjct  473   MEPSPR  478


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = -1

Query  1057  LVVPAMSLP--LGSL  1019
             L  PA+SLP  L SL
Sbjct  236   LTLPALSLPMKLVSL  250


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  5263  LGRSGSHNK  5289
             LGRSGS  K
Sbjct  310   LGRSGSDSK  318


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3183  LVWAP  3169
             LVWAP
Sbjct  172   LVWAP  176


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8523  QEEEEV  8540
             QEEE+V
Sbjct  873   QEEEDV  878


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -1

Query  8383  GHPITL-LF-------DHLPP  8345
             G P  L LF       DHLPP
Sbjct  1342  GRPQSLILFSPPFPIMDHLPP  1362


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +3

Query  1338  KALGPAATLEEMMTACQGVGGPG  1406
             KA  P AT E        VGGPG
Sbjct  762   KA-SPQATVE--------VGGPG  775


 Score = 18.0 bits (35),  Expect(2) =  4636
 Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 14/28 (50%)
 Frame = -2

Query  9093  ERPSTGKKQLLICRI*GLATP--QSRPG  9016
             ERPS G K            P   SRPG
Sbjct  1327  ERPSGGSK------------PFHRSRPG  1342


 Score = 16.8 bits (32),  Expect(2) =  4636
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  9041  SPLPSPAQATPP  9006
             SP  SP Q   P
Sbjct  1374  SPIRSPTQTVSP  1385


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7643  DSKSVPE  7623
             D K VPE
Sbjct  559   DAKAVPE  565


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5773  ESEGEISAL  5799
             ESE E S L
Sbjct  664   ESEEELSSL  672


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8330  SFPSPV  8313
             SFP PV
Sbjct  706   SFPAPV  711


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1721  LQVWGRD  1741
             L+VW RD
Sbjct  715   LEVWTRD  721


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +1

Query  8464  EQSQVA-----IQQLP  8496
             E+ Q A     IQ+LP
Sbjct  124   EEGQLARIQNVIQELP  139


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 8/22 (36%)
 Frame = +3

Query  4140  PVLRL---GPPVGGRE-SSRNL  4193
             PVL L   GP    RE SSR L
Sbjct  796   PVL-LSKGGP---EREDSSRKL  813


 Score = 16.8 bits (32),  Expect(2) =  9707
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  8841  PVSLHGMDDPERE  8879
             PV     +DPE E
Sbjct  437   PV-----EDPESE  444


 Score = 16.3 bits (31),  Expect(2) =  9707
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8963  TSSLLQ  8980
             TSSL Q
Sbjct  467   TSSLFQ  472


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1056  STLQE  1070
             STLQE
Sbjct  624   STLQE  628


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1021  LIWP  1010
             LIWP
Sbjct  651   LIWP  654


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP PPP P
Sbjct  784   AP-PPPTP  790


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5153  EWTLE  5167
             +WTLE
Sbjct  964   QWTLE  968


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +1

Query  8161  ESPTVLESGTKE  8196
             +SP  LES  KE
Sbjct  1250  DSPSSLES-SKE  1260


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  229   LSTQD  243
             LSTQD
Sbjct  1298  LSTQD  1302


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8027  LALIW  8041
             LAL+W
Sbjct  170   LALVW  174


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8636  RANSLP  8653
             R NSLP
Sbjct  269   RENSLP  274


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +3

Query  1746  TPPQKQEPIDKELYPLTSL  1802
             TPP       KEL  L SL
Sbjct  511   TPP-------KELQSLSSL  522


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7563  QPQIPR  7546
             QPQ PR
Sbjct  988   QPQAPR  993


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -2

Query  1884  SAPVS---NRASF  1855
             SAPVS    R SF
Sbjct  1178  SAPVSVSAVRTSF  1190


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6270  VRCRKNM  6290
             V CRK M
Sbjct  1305  VQCRKRM  1311


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  471   VNPGLL  488
             V PGLL
Sbjct  1383  VSPGLL  1388


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 6/16 (37%)
 Frame = +1

Query  268  KRRGAATG------EY  297
            KR GAA        EY
Sbjct  11   KRKGAASAFGCDLTEY  26


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6815  LREQFGNN  6838
             LR++FG +
Sbjct  67    LRQEFGSD  74


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5156  IHCV  5145
             IHCV
Sbjct  88    IHCV  91


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5178  SLRMKL  5195
             SL MKL
Sbjct  242   SLPMKL  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = +1

Query  187  PEQ--------GPESE  210
            PEQ         PESE
Sbjct  429  PEQLKVFRPVEDPESE  444


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  3807  SSWALSIPSKNS  3772
             S W L +PS  S
Sbjct  963   SQWTLEVPSSSS  974


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3994  PGSSSC  4011
             P SSSC
Sbjct  970   PSSSSC  975


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 9/23 (39%)
 Frame = +1

Query  5833  PW-----DVDDL*CYRKIVGHSL  5886
             PW     D  DL     IV H L
Sbjct  1154  PWRVYSQDPQDL----DIVAHAL  1172


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  25    EPGSS  39
             EPGSS
Sbjct  1291  EPGSS  1295


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9110  EPGSS  9124
             EPGSS
Sbjct  1291  EPGSS  1295


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 14/26 (53%)
 Frame = -2

Query  4515  PS----PFQRS----------FAGPF  4480
             PS    PF+RS          F  PF
Sbjct  1329  PSGGSKPFHRSRPGRPQSLILFSPPF  1354


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  338   HLSPSS  321
             HL PSS
Sbjct  1359  HLPPSS  1364


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8652  QRRQDILD  8675
             QRR  ILD
Sbjct  1429  QRRSVILD  1436


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  1673  EFSSEQ----TR  1696
             EF S+Q    TR
Sbjct  70    EFGSDQCPDLTR  81


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4451  YYRDSRNPL  4477
             Y+R+  NPL
Sbjct  98    YFRELPNPL  106


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8850  LHGMDD  8867
             LH MD+
Sbjct  639   LHEMDE  644


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  777  IWPDV  763
            IWP++
Sbjct  652  IWPEI  656


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  466   NRSSSL  449
             NR SSL
Sbjct  1102  NRPSSL  1107


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8778  VPVEPDKIE  8804
             VPV P KI+
Sbjct  1200  VPVIPPKIQ  1208


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2234  FSLPFP  2217
             FS PFP
Sbjct  1350  FSPPFP  1355


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +1

Query  3376  PVRERTHSRSRNLLC  3420
             P+R  T+  S  LLC
Sbjct  1375  PIRSPTQTVSPGLLC  1389


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8491  LPMLLV  8508
             LPM LV
Sbjct  243   LPMKLV  248


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  9041  SPLPSPAQATPP  9006
             S LP PA  T P
Sbjct  670   SSLPPPALKTSP  681


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  783   PAPPP  787


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1822  TPRH  1833
             TPRH
Sbjct  840   TPRH  843


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  1111  PAIPI  1115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +3

Query  8391  RERMRRAEPAAD  8426
             R RM   EP  D
Sbjct  1308  RKRMSETEPSGD  1319


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2560  ITSNI  2574
             +TSNI
Sbjct  60    VTSNI  64


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6520  SMCTLY  6503
             S+C LY
Sbjct  93    SLCKLY  98


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  3521  KTELQAIYLAL  3553
             KT ++A  LAL
Sbjct  162   KTNMHARNLAL  172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1540  PEIAGPLG  1563
             PEI  P+G
Sbjct  274   PEIVPPMG  281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2555  SIPVE  2541
             S+PVE
Sbjct  352   SVPVE  356


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5461  FYNSN  5447
             FY SN
Sbjct  454   FYTSN  458


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1350  PAATLEEMMT  1379
             P A LEE  T
Sbjct  580   PGAHLEEKKT  589


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1402  PAIRQEFWLK  1431
             P I QE  LK
Sbjct  654   PEIQQE--LK  661


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5822  PISTP  5808
             P+STP
Sbjct  710   PVSTP  714


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  3569  EVNIVTDSQ  3595
             EV IV  SQ
Sbjct  867   EVEIV--SQ  873


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             SPL SP
Sbjct  916   SPLHSP  921


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1058  TSSSCY  1041
             TS SC+
Sbjct  1420  TSTSCF  1425


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6030  TNTTSC  6013
             TN T C
Sbjct  504   TNSTPC  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  205  FQVPVRAPL  179
            F  PV  PL
Sbjct  707  FPAPVSTPL  715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  927  WLLDVP  910
            W L+VP
Sbjct  965  WTLEVP  970


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9040  EPSDP  9054
             EP DP
Sbjct  1136  EPGDP  1140


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7600  PRHSSGAN  7577
             P +SSG N
Sbjct  1217  PSQSSGEN  1224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  491  NIRRL  505
            NI RL
Sbjct  63   NIQRL  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4090  RKMASK  4107
             RK+ SK
Sbjct  295   RKLSSK  300


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  3401  GAETFYVDGAANRE  3442
             GA T     AA RE
Sbjct  729   GAST-----AASRE  737


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  2837  EKDSWTVNDI  2866
             E D  TV DI
Sbjct  890   EDD--TVTDI  897


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7537  STAPGD  7554
             ST PG+
Sbjct  1078  STSPGE  1083


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 4/9 (44%), Gaps = 0/9 (0%)
 Frame = -2

Query  4323  WMNTAICTA  4297
             WM    C A
Sbjct  1144  WMTSSYCKA  1152


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6729  IVTNALPG  6706
             IV  AL G
Sbjct  1167  IVAHALTG  1174


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9029  SPAQATPP  9006
             SP  AT P
Sbjct  1273  SPVDATAP  1280


>ref|NP_001001390.1|  CD44 antigen isoform 3 precursor [Homo sapiens]
Length=493

 GENE ID: 960 CD44 | CD44 molecule (Indian blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  2014  RYSISRT  2034
             RYSISRT
Sbjct  41    RYSISRT  47


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  6326  NDTTSYKLTSCNTS  6367
             N+T  Y LTS NTS
Sbjct  100   NNTGVYILTS-NTS  112


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1704  APPEE  1718
             APPEE
Sbjct  123   APPEE  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -1

Query  8287  SSTSSLYYFY-----NPI  8249
             SSTS  Y FY      PI
Sbjct  187   SSTSGGYIFYTFSTVHPI  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3702  YQHTKE  3719
             Y HTKE
Sbjct  315   YPHTKE  320


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3837  QWLVIL  3854
             +WL+IL
Sbjct  400   EWLIIL  405


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  752  GANGTSGHI  778
            GAN TSG I
Sbjct  385  GANTTSGPI  393


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1171  GLYILT  1154
             G YILT
Sbjct  103   GVYILT  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  826  KAFSST  809
            KAF ST
Sbjct  54   KAFNST  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8174  TVGDS  8160
             TVGDS
Sbjct  341   TVGDS  345


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5071  GGFIFF  5054
             GG+IF+
Sbjct  191   GGYIFY  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2430  PTSSTVT  2410
             PT ST T
Sbjct  278   PTTSTLT  284


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2562  DPFHPCG  2542
             D FHP G
Sbjct  358   DTFHPSG  364


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  221  LVSLSL  204
            LV LSL
Sbjct  14   LVPLSL  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  3301  DRVLASHLDS  3330
             DR+ A  +DS
Sbjct  217   DRIPATNMDS  226


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4125  LSVCI  4111
             L VCI
Sbjct  415   LAVCI  419


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2900  DLPN  2889
             DLPN
Sbjct  134   DLPN  137


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  731  VILADLIA  708
            +ILA L A
Sbjct  403  IILASLLA  410


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             TL TM
Sbjct  59    TLPTM  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6102  KLIISS  6085
             KL+I S
Sbjct  432   KLVINS  437


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3113  DMSIG  3099
             DM IG
Sbjct  488   DMKIG  492


>pdb|2FL5|L  Chain L, Cofactor-Containing Antibodies: Crystal Structure Of 
The Original Yellow Antibody
 pdb|2FL5|A  Chain A, Cofactor-Containing Antibodies: Crystal Structure Of 
The Original Yellow Antibody
 pdb|2FL5|C  Chain C, Cofactor-Containing Antibodies: Crystal Structure Of 
The Original Yellow Antibody
 pdb|2FL5|E  Chain E, Cofactor-Containing Antibodies: Crystal Structure Of 
The Original Yellow Antibody
Length=209


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  158   GVETTTPS-KQ  167


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  6     QPPSVS  11


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  191   YSCQVTH  197


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  189   RSYSCQ  194


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  120  PS----SEELQA--NK-ATLVC  134


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  73    TISGAQVED  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 9/21 (42%)
 Frame = -1

Query  8392  LTVGHP-----ITLLFDHLPP  8345
             L VG+P     +T LF   PP
Sbjct  104   LSVGQPKAAPSVT-LF---PP  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  112   APSVTL  117


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = -3

Query  3827  YC--DIS  3813
             YC  DIS
Sbjct  86    YCYSDIS  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2819  VLSIYQD  2799
             VL +Y+D
Sbjct  44    VLVVYED  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  113   PSVTLF  118


>gb|AAO91767.1|  IRF4-binding protein [Homo sapiens]
Length=631

 GENE ID: 50619 DEF6 | differentially expressed in FDCP 6 homolog (mouse)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  3705  QHTKELEEM  3731
             Q  KELEEM
Sbjct  426   QRIKELEEM  434


 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 15/27 (55%)
 Frame = -3

Query  2585  CYFG---------ILLVILSIPVEAHC  2532
             CYFG         I      IP +AHC
Sbjct  246   CYFGSEECKEKRGI------IPLDAHC  266


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7269  RQREEW  7286
             RQR+EW
Sbjct  298   RQRQEW  303


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  3529  VTSNLSSFAGF  3561
             VTS  SSF GF
Sbjct  562   VTS--SSFSGF  570


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  1245  LRAEQASQEVKNW  1283
             LR  QAS  VK W
Sbjct  533   LR--QASTNVKHW  543


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
 Frame = +2

Query  3014  REILKEPVHGVYYDPSKDLIAEIQKQG  3094
             R+ L   +H VY     +LI ++ KQG
Sbjct  199   RDTLSMAIHEVY----QELIQDVLKQG  221


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  4557  QEEKQRSL  4580
             QEEK+R L
Sbjct  354   QEEKERKL  361


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 5/25 (20%)
 Frame = +1

Query  3901  MSA--KRRSHAWTSRL*SRNMATRL  3969
             MSA   R  + WT       MA RL
Sbjct  292   MSASDTRQRQEWTA---AIQMAIRL  313


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  2213  EMEKEGKISK  2242
             + EK GK+SK
Sbjct  19    DVEKSGKVSK  28


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4501  EELCW  4487
             +ELCW
Sbjct  91    DELCW  95


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  6403  LK-GYLW  6386
             LK GYLW
Sbjct  218   LKQGYLW  224


 Score = 19.7 bits (39),  Expect(2) =  3300
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  605  LMHTIE  588
            LMH IE
Sbjct  550  LMHPIE  555


 Score = 16.3 bits (31),  Expect(2) =  3300
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  481  PGLTANRSSSL  449
            P L A R SSL
Sbjct  572  PPLLAHRDSSL  582


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  978  LYPILQLPH  952
            LY +L+ PH
Sbjct  38   LYTVLHIPH  46


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +2

Query  1655  LQGKAREFSSEQTRA  1699
             L+G  RE   EQ RA
Sbjct  396   LEGQLRE--AEQARA  408


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2170  WPLFNF  2153
             W LFNF
Sbjct  122   WCLFNF  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2288  SLWQILE  2268
             S WQ LE
Sbjct  180   SVWQFLE  186


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             LELL+E
Sbjct  364   LELLQE  369


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2447  VPLDEDFR  2470
             V L+E FR
Sbjct  49    VALEEHFR  56


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4298  AVQMAV  4315
             A+QMA+
Sbjct  306   AIQMAI  311


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1847  GQLKEA  1864
             GQL EA
Sbjct  398   GQLREA  403


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8647  TPKEDK  8664
             TP EDK
Sbjct  619   TPQEDK  624


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9162  LLRLKQ  9145
             LLRL Q
Sbjct  347   LLRLQQ  352


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  77   LLRLKQ  60
            LLRL Q
Sbjct  347  LLRLQQ  352


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6708  QGEHLLQ  6728
             Q E LLQ
Sbjct  373   QAERLLQ  379


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  5824  APSPPPSPQ  5798
             AP P   PQ
Sbjct  613   APAPASTPQ  621


 Score = 17.2 bits (33),  Expect(2) = 19349
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8793  DKIEE  8807
             DK+EE
Sbjct  78    DKVEE  82


 Score = 15.1 bits (28),  Expect(2) = 19349
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8694  QGYFP  8708
             QGY P
Sbjct  66    QGYMP  70


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 10/23 (43%)
 Frame = -3

Query  2771  EVLSD------VFCLVW*VPTST  2721
             EVL D       FC    V T T
Sbjct  269   EVLPDRDGKRCMFC----VKTAT  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2830  AARKRQ  2847
             AAR RQ
Sbjct  421   AARQRQ  426


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7474  ELQQMLLRL  7448
             EL++M  RL
Sbjct  430   ELEEMQQRL  438


 Score = 15.9 bits (30),  Expect(2) = 27612
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8514  LEAQEE  8531
             LE +EE
Sbjct  463   LEEEEE  468


 Score = 15.5 bits (29),  Expect(2) = 27612
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +3

Query  8520  AQEE-EE  8537
             AQ+E EE
Sbjct  487   AQQEKEE  493


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4941  AIRKALL  4961
             A RK LL
Sbjct  2     ALRKELL  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = +3

Query  2136  QEW-----MA  2150
             QEW     MA
Sbjct  301   QEWTAAIQMA  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8956  TADIELATR  8982
             TA I++A R
Sbjct  304   TAAIQMAIR  312


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5540  DEELIR  5557
             +EEL R
Sbjct  344   EEELLR  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  7421  QQNNLLRAIE-AQQHL  7465
             QQ    R  + AQQ+L
Sbjct  500   QQS---RSLQQAQQQL  512


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  999   PIAPGQMR  1022
             PI PG  R
Sbjct  553   PIEPGDKR  560


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6311  IIPID  6325
             IIP D
Sbjct  259   IIPLD  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1011  GQMRE  1025
             GQ+RE
Sbjct  398   GQLRE  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +2

Query  2687  HRTK-IEELRQHL  2722
             +R K  EE+ Q L
Sbjct  426   QRIKELEEMQQRL  438


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3123  KSHLKI  3140
             KS+LK+
Sbjct  28    KSQLKV  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8656  EDKISLI  8676
             EDK  LI
Sbjct  130   EDKYPLI  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8948  LQELL  8962
             L+ELL
Sbjct  162   LEELL  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  688  QQLTQD  705
            Q+L QD
Sbjct  211  QELIQD  216


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8951  EVLRMQ  8934
             E LR+Q
Sbjct  346   ELLRLQ  351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  257  LQQAE  243
            LQQA+
Sbjct  505  LQQAQ  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2702  EELRQ  2716
             EE RQ
Sbjct  513   EEVRQ  517


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8636  FQSPL  8622
             FQ PL
Sbjct  570   FQPPL  574


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  9053  GSEGSPLPSP  9024
             GS+G   PSP
Sbjct  589   GSQGNRTPSP  598


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3016  RDSKR  3030
             RD KR
Sbjct  274   RDGKR  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4557  QEEKQRS  4577
             +EE  RS
Sbjct  381   EEERRRS  387


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  6855  SNPQEGTQKL  6884
             S PQE   KL
Sbjct  618   STPQE--DKL  625


>ref|NP_071330.3|  differentially expressed in FDCP 6 homolog [Homo sapiens]
 sp|Q9H4E7.1|DEFI6_HUMAN  RecName: Full=Differentially expressed in FDCP 6 homolog; Short=DEF-6; 
AltName: Full=IRF4-binding protein
Length=631

 GENE ID: 50619 DEF6 | differentially expressed in FDCP 6 homolog (mouse)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  3705  QHTKELEEM  3731
             Q  KELEEM
Sbjct  426   QRIKELEEM  434


 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 15/27 (55%)
 Frame = -3

Query  2585  CYFG---------ILLVILSIPVEAHC  2532
             CYFG         I      IP +AHC
Sbjct  246   CYFGSEECKEKRGI------IPLDAHC  266


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7269  RQREEW  7286
             RQR+EW
Sbjct  298   RQRQEW  303


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  3529  VTSNLSSFAGF  3561
             VTS  SSF GF
Sbjct  562   VTS--SSFSGF  570


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  1245  LRAEQASQEVKNW  1283
             LR  QAS  VK W
Sbjct  533   LR--QASTNVKHW  543


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 4/27 (14%)
 Frame = +2

Query  3014  REILKEPVHGVYYDPSKDLIAEIQKQG  3094
             R+ L   +H VY     +LI ++ KQG
Sbjct  199   RDTLSMAIHEVY----QELIQDVLKQG  221


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  4557  QEEKQRSL  4580
             QEEK+R L
Sbjct  354   QEEKERKL  361


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 5/25 (20%)
 Frame = +1

Query  3901  MSA--KRRSHAWTSRL*SRNMATRL  3969
             MSA   R  + WT       MA RL
Sbjct  292   MSASDTRQRQEWTA---AIQMAIRL  313


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  2213  EMEKEGKISK  2242
             + EK GK+SK
Sbjct  19    DVEKSGKVSK  28


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4501  EELCW  4487
             +ELCW
Sbjct  91    DELCW  95


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  6403  LK-GYLW  6386
             LK GYLW
Sbjct  218   LKQGYLW  224


 Score = 19.7 bits (39),  Expect(2) =  3300
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  605  LMHTIE  588
            LMH IE
Sbjct  550  LMHPIE  555


 Score = 16.3 bits (31),  Expect(2) =  3300
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  481  PGLTANRSSSL  449
            P L A R SSL
Sbjct  572  PPLLAHRDSSL  582


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  978  LYPILQLPH  952
            LY +L+ PH
Sbjct  38   LYTVLHIPH  46


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +2

Query  1655  LQGKAREFSSEQTRA  1699
             L+G  RE   EQ RA
Sbjct  396   LEGQLRE--AEQARA  408


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2170  WPLFNF  2153
             W LFNF
Sbjct  122   WCLFNF  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2288  SLWQILE  2268
             S WQ LE
Sbjct  180   SVWQFLE  186


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             LELL+E
Sbjct  364   LELLQE  369


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2447  VPLDEDFR  2470
             V L+E FR
Sbjct  49    VALEEHFR  56


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4298  AVQMAV  4315
             A+QMA+
Sbjct  306   AIQMAI  311


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1847  GQLKEA  1864
             GQL EA
Sbjct  398   GQLREA  403


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8647  TPKEDK  8664
             TP EDK
Sbjct  619   TPQEDK  624


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9162  LLRLKQ  9145
             LLRL Q
Sbjct  347   LLRLQQ  352


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  77   LLRLKQ  60
            LLRL Q
Sbjct  347  LLRLQQ  352


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6708  QGEHLLQ  6728
             Q E LLQ
Sbjct  373   QAERLLQ  379


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  5824  APSPPPSPQ  5798
             AP P   PQ
Sbjct  613   APAPASTPQ  621


 Score = 17.2 bits (33),  Expect(2) = 19349
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8793  DKIEE  8807
             DK+EE
Sbjct  78    DKVEE  82


 Score = 15.1 bits (28),  Expect(2) = 19349
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8694  QGYFP  8708
             QGY P
Sbjct  66    QGYMP  70


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6736  NRKYETS  6756
             NR YE S
Sbjct  287   NRTYEMS  293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2830  AARKRQ  2847
             AAR RQ
Sbjct  421   AARQRQ  426


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7474  ELQQMLLRL  7448
             EL++M  RL
Sbjct  430   ELEEMQQRL  438


 Score = 15.9 bits (30),  Expect(2) = 27612
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8514  LEAQEE  8531
             LE +EE
Sbjct  463   LEEEEE  468


 Score = 15.5 bits (29),  Expect(2) = 27612
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +3

Query  8520  AQEE-EE  8537
             AQ+E EE
Sbjct  487   AQQEKEE  493


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4941  AIRKALL  4961
             A RK LL
Sbjct  2     ALRKELL  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = +3

Query  2136  QEW-----MA  2150
             QEW     MA
Sbjct  301   QEWTAAIQMA  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5540  DEELIR  5557
             +EEL R
Sbjct  344   EEELLR  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  7421  QQNNLLRAIE-AQQHL  7465
             QQ    R  + AQQ+L
Sbjct  500   QQS---RSLQQAQQQL  512


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  999   PIAPGQMR  1022
             PI PG  R
Sbjct  553   PIEPGDKR  560


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6311  IIPID  6325
             IIP D
Sbjct  259   IIPLD  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 6/14 (42%)
 Frame = -3

Query  2771  EVLSD------VFC  2748
             EVL D       FC
Sbjct  269   EVLPDRDGKRCMFC  282


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1011  GQMRE  1025
             GQ+RE
Sbjct  398   GQLRE  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +2

Query  2687  HRTK-IEELRQHL  2722
             +R K  EE+ Q L
Sbjct  426   QRIKELEEMQQRL  438


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3123  KSHLKI  3140
             KS+LK+
Sbjct  28    KSQLKV  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8656  EDKISLI  8676
             EDK  LI
Sbjct  130   EDKYPLI  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8948  LQELL  8962
             L+ELL
Sbjct  162   LEELL  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  688  QQLTQD  705
            Q+L QD
Sbjct  211  QELIQD  216


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8951  EVLRMQ  8934
             E LR+Q
Sbjct  346   ELLRLQ  351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  257  LQQAE  243
            LQQA+
Sbjct  505  LQQAQ  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2702  EELRQ  2716
             EE RQ
Sbjct  513   EEVRQ  517


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8636  FQSPL  8622
             FQ PL
Sbjct  570   FQPPL  574


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  9053  GSEGSPLPSP  9024
             GS+G   PSP
Sbjct  589   GSQGNRTPSP  598


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3016  RDSKR  3030
             RD KR
Sbjct  274   RDGKR  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4557  QEEKQRS  4577
             +EE  RS
Sbjct  381   EEERRRS  387


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  6855  SNPQEGTQKL  6884
             S PQE   KL
Sbjct  618   STPQE--DKL  625


>sp|Q9BYX4.3|IFIH1_HUMAN  RecName: Full=Interferon-induced helicase C domain-containing 
protein 1; AltName: Full=Interferon-induced with helicase C 
domain protein 1; AltName: Full=Helicase with 2 CARD domains; 
Short=Helicard; AltName: Full=Melanoma differentiation-associated 
protein 5; Short=MDA-5; AltName: Full=RNA helicase-DEAD 
box protein 116; AltName: Full=Murabutide down-regulated 
protein
Length=1025

 GENE ID: 64135 IFIH1 | interferon induced with helicase C domain 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = +2

Query  1724  QVWGRDNNSPSEAG-AD  1771
             +VWG +NNS SE   AD
Sbjct  236   EVWGMENNS-SESSFAD  251


 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 3/18 (16%)
 Frame = +1

Query  5725  DRLIDRLIERAEDSGNES  5778
             DR  +R I  AE+ GNES
Sbjct  148   DR--NR-IAAAENNGNES  162


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = +2

Query  3644  LVNQI--IEQLIKKE  3682
             LVN +  +EQL  KE
Sbjct  362   LVNKVLLVEQLFRKE  376


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
 Frame = +2

Query  7394  RQLLSGIVQQQN------NLLR  7441
             R+LL  IVQ +N      N LR
Sbjct  165   RELLKRIVQKENWFSAFLNVLR  186


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = +1

Query  3235  SNMGKDS*I*TAHTKGNMG  3291
             SNMG DS        G MG
Sbjct  278   SNMGSDS--------GTMG  288


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 12/40 (30%), Positives = 13/40 (32%), Gaps = 23/40 (57%)
 Frame = +3

Query  4821  WHLGQGVSIEW--------RKK------RYSTQVDPELAD  4898
             WHLG      W        R        RY    +PEL D
Sbjct  71    WHLG------WTREFVEALRRTGSPLAARY---MNPELTD  101


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  4339  FSFKIVDEYCH  4307
             FS  I+DE CH
Sbjct  437   FSLIIIDE-CH  446


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4281  LNILRQ  4298
             LN+LRQ
Sbjct  182   LNVLRQ  187


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  4523  VIQDNSD  4543
             VI+D+SD
Sbjct  640   VIEDDSD  646


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  8887  SNTSLSGSSIPC  8852
             S+TSL   S+ C
Sbjct  258   SDTSLAEGSVSC  269


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5534  DSDEE  5548
             DSDEE
Sbjct  290   DSDEE  294


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 4/17 (23%)
 Frame = +3

Query  4188  NLE-FPTIPKVKE**NL  4235
             NL+ F TI  VKE  NL
Sbjct  512   NLDAF-TIKTVKE--NL  525


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5578  KLDESD  5561
             KLDE D
Sbjct  668   KLDETD  673


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5819  WGTML  5833
             WGTM+
Sbjct  968   WGTMM  972


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  510  QILGQLQPSL  539
            Q L  LQP L
Sbjct  116  QLLNLLQPTL  125


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3545  DKLLV  3531
             DKLLV
Sbjct  127   DKLLV  131


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  7397  QLLSGIVQQQNNL  7435
             QLLS  VQ   NL
Sbjct  223   QLLSTTVQP--NL  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  769  RPYHLE  786
            RPY++E
Sbjct  309  RPYQME  314


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
 Frame = -2

Query  7575  SFPEQPQIPRSC*SFRY---LSTARIL  7504
             SFPE   +  SC         STA IL
Sbjct  399   SFPE---VVKSC-----DIIISTAQIL  417


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6904  TIKTV  6890
             TIKTV
Sbjct  517   TIKTV  521


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  8933  AASGVLQ--ELLTSSL  8974
             A SG +Q  ELL S L
Sbjct  51    ATSGNMQAVELLLSTL  66


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  5171  KALVSIHCV  5145
             KA   IHCV
Sbjct  856   KA---IHCV  861


 Score = 17.2 bits (33),  Expect(2) = 15901
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  1374  MTACQGVGG  1400
             +TA  GVGG
Sbjct  487   LTASPGVGG  495


 Score = 15.1 bits (28),  Expect(2) = 15901
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1436  EPSNKF  1453
             EP  KF
Sbjct  534   EPCKKF  539


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -1

Query  6232  YLSFLHYHSPA  6200
             YL FL    PA
Sbjct  34    YLTFL----PA  40


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6548  AVELIL  6531
             AVEL L
Sbjct  58    AVELLL  63


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  3759  PALTNLSTCSF  3727
             P LT+L   SF
Sbjct  97    PELTDLPSPSF  107


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4780  TNLASPS  4760
             T+L SPS
Sbjct  100   TDLPSPS  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  540  QTGSEEL  560
            QTG  EL
Sbjct  187  QTGNNEL  193


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  9132  LARELPGSD  9106
             L  EL GSD
Sbjct  193   LVQELTGSD  201


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  47   LARELPGSD  21
            L  EL GSD
Sbjct  193  LVQELTGSD  201


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3878  EIVASCD  3898
             E+V SCD
Sbjct  402   EVVKSCD  408


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5464  TFYN  5453
             TFYN
Sbjct  628   TFYN  631


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query  8204  VSLLNATAIAVAEGTD  8251
             + LL AT +A  EG D
Sbjct  783   INLLIATTVA-EEGLD  797


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8717  LLIREV  8700
             LL+R+V
Sbjct  129   LLVRDV  134


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7280  RVVQRE  7297
             R+VQ E
Sbjct  170   RIVQKE  175


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  7567  RATPNPQEL  7541
             RA P P EL
Sbjct  299   RASPEP-EL  306


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  615  IKDTKEALD  641
            IK  KE LD
Sbjct  518  IKTVKENLD  526


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9081  TGKKQLLI  9058
             TGK  LLI
Sbjct  780   TGKINLLI  787


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  641  QDRGRA  658
            Q RGRA
Sbjct  818  QARGRA  823


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2362  FPEV  2351
             FPEV
Sbjct  400   FPEV  403


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +3

Query  6384  VQRYPLSQFPYIIV  6425
             VQ   LS F  II+
Sbjct  432   VQ---LSDFSLIII  442


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6100  TDYILMHLFY  6071
             TD  LM LF+
Sbjct  672   TDRFLMTLFF  681


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  2614  TKSRHS-Y-LS  2640
             TK R+S Y LS
Sbjct  725   TKTRQSAYALS  735


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2327  RELNKR  2344
             REL KR
Sbjct  165   RELLKR  170


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6852  KIIVL  6838
             K+IVL
Sbjct  358   KVIVL  362


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9080  VLGLSG  9097
             V GLSG
Sbjct  387   VIGLSG  392


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  927  MQMLK  941
            MQ LK
Sbjct  463  MQKLK  467


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8743  LTPGPGV  8723
             LT  PGV
Sbjct  487   LTASPGV  493


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5859  LQKNC  5873
             LQK C
Sbjct  947   LQKKC  951


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +3

Query  2502  TMR-HQGLD  2525
             TM  H GLD
Sbjct  970   TMMVHKGLD  978


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             QI RT+
Sbjct  45    QIQRTV  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1227  DRFYKTL  1247
             DRF  TL
Sbjct  673   DRFLMTL  679


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4945  IAESEK  4928
             I E EK
Sbjct  738   ITENEK  743


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2514  QGLDI  2528
             +GLDI
Sbjct  794   EGLDI  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  8981  LVASSMSAVLE  8949
             LVA S S V E
Sbjct  832   LVAHSGSGVIE  842


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6668  NNNTRK  6685
             NN T K
Sbjct  993   NNSTKK  998


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4516  PFTFP  4502
             P TFP
Sbjct  1007  PITFP  1011


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5165  ELLEEL  5182
             EL +EL
Sbjct  192   ELVQEL  197


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6230  IKNCSFNIST  6259
             +K C   IST
Sbjct  404   VKSCDIIIST  413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5305  QLLQNS  5288
             Q L+NS
Sbjct  415   QILENS  420


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1195  CLMSRM  1178
             C MS M
Sbjct  565   CQMSPM  570


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7813  YKIIH  7827
             YK IH
Sbjct  855   YKAIH  859


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5709  KTKKN  5723
             KTK N
Sbjct  887   KTKRN  891


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  648  LSCLK  634
            L CLK
Sbjct  979  LPCLK  983


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5045  NNTKK  5059
             N TKK
Sbjct  994   NSTKK  998


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8268  YKELVEL  8288
             YK  VEL
Sbjct  1000  YKKWVEL  1006


>ref|NP_775087.1|  interleukin-28 receptor subunit alpha isoform 2 [Homo sapiens]
Length=491

 GENE ID: 163702 IL28RA | interleukin 28 receptor, alpha (interferon, lambda
receptor) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 8/23 (34%)
 Frame = -3

Query  3233  CFL-------WLFFALP-LLIVL  3189
             CFL       W F  LP LLI L
Sbjct  217   CFLLEVPEANWAFLVLPSLLILL  239


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +3

Query  8544  FPVTP-----QVPLRP  8576
             FPVTP     Q+ L P
Sbjct  173   FPVTPHGQPVQITLQP  188


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3686  VYLAWVP  3706
             VYL W P
Sbjct  39    VYLTWLP  45


 Score = 18.5 bits (36),  Expect(2) =  2870
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 16/37 (43%)
 Frame = -2

Query  8880  LL--SPGHPSHAGSQGVTSWCSLLYWPLLS-----YL  8791
             LL   PG P  A  Q VT         LLS     YL
Sbjct  14    LLQAAPGRPRLAPPQNVT---------LLSQNFSVYL  41


 Score = 18.0 bits (35),  Expect(2) =  2870
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8801  YLIWL  8787
             YL WL
Sbjct  40    YLTWL  44


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = -3

Query  230  RAPLVSLSLSGPCSGATARD  171
            RAPLV      P  G  A D
Sbjct  342  RAPLV------PSEGSSAWD  355


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4436  QNFRVY  4453
             QNF VY
Sbjct  35    QNFSVY  40


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5816  RWGTMLL  5836
             RWG +LL
Sbjct  6     RWGPLLL  12


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  3335  TQESRW---LA  3312
             TQ+ RW   LA
Sbjct  284   TQQTRWKKDLA  294


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1703  SPTRR  1717
             SPTRR
Sbjct  62    SPTRR  66


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 2/16 (12%)
 Frame = +2

Query  5888  YGVPVWKEAT--TTLF  5929
             Y V  WKE     TLF
Sbjct  158   YEVAFWKEGAGNKTLF  173


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = +2

Query  5216  WLHGLG--QHIYETY  5254
             WL GLG  Q +  TY
Sbjct  43    WLPGLGNPQDV--TY  55


 Score = 17.2 bits (33),  Expect(2) = 12103
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6852  LSNPQEGT  6875
             L NPQ+ T
Sbjct  47    LGNPQDVT  54


 Score = 16.3 bits (31),  Expect(2) = 12103
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6762  VTLVEQN  6782
             VTL  QN
Sbjct  30    VTLLSQN  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3245  PILLCFL  3225
             P LLC L
Sbjct  9     PLLLCLL  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 21/42 (50%)
 Frame = -2

Query  426  IYIFS------------FPLALTE----FFPIDLILPR-LIL  352
            IY FS            F L   E    F    L+LP  LIL
Sbjct  201  IYTFSVPKYSKFSKPTCFLLEVPEANWAF----LVLPSLLIL  238


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7489  QAAPG  7503
             QAAPG
Sbjct  16    QAAPG  20


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5081  TRQRW  5067
             TR RW
Sbjct  64    TRRRW  68


 Score = 16.8 bits (32),  Expect(2) = 21394
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2363  LPRSLE  2346
             +PR LE
Sbjct  263   MPRALE  268


 Score = 15.5 bits (29),  Expect(2) = 21394
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2375  FLIELP  2358
             FL E P
Sbjct  218   FLLEVP  223


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             +EEEE
Sbjct  452   EEEEE  456


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3177  WAPLIL  3160
             W PL L
Sbjct  7     WGPLLL  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  459  LAPCLP  442
            L PC+P
Sbjct  147  LPPCMP  152


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  2053  WKKSVDSDW  2079
             W   VDS W
Sbjct  361   WASTVDSSW  369


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  7008  QSPSHAE  7028
             Q P H E
Sbjct  326   QAPGHSE  332


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  641  QDRGR  655
            +DRGR
Sbjct  479  EDRGR  483


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  256  FSKP  245
            FSKP
Sbjct  212  FSKP  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             LP +L+L L
Sbjct  232   LPSLLILLL  240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  3716  LCVLVPMPDRP  3684
             LC L   P RP
Sbjct  12    LCLLQAAPGRP  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1539  LCALLC  1522
             LC ++C
Sbjct  81    LCSMMC  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3276  CMGSLNL  3256
             CM  L+L
Sbjct  150   CMPPLDL  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7882  YRKYSK  7865
             Y K+SK
Sbjct  209   YSKFSK  214


>ref|NP_001001392.1|  CD44 antigen isoform 5 precursor [Homo sapiens]
Length=139

 GENE ID: 960 CD44 | CD44 molecule (Indian blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  2014  RYSISRT  2034
             RYSISRT
Sbjct  41    RYSISRT  47


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  826  KAFSST  809
            KAF ST
Sbjct  54   KAFNST  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  221  LVSLSL  204
            LV LSL
Sbjct  14   LVPLSL  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             TL TM
Sbjct  59    TLPTM  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2068  QQISSN  2051
             QQ+S N
Sbjct  116   QQVSGN  121


>ref|NP_001001391.1|  CD44 antigen isoform 4 precursor [Homo sapiens]
Length=361

 GENE ID: 960 CD44 | CD44 molecule (Indian blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  2014  RYSISRT  2034
             RYSISRT
Sbjct  41    RYSISRT  47


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  6326  NDTTSYKLTSCNTS  6367
             N+T  Y LTS NTS
Sbjct  100   NNTGVYILTS-NTS  112


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1704  APPEE  1718
             APPEE
Sbjct  123   APPEE  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -1

Query  8287  SSTSSLYYFY-----NPI  8249
             SSTS  Y FY      PI
Sbjct  187   SSTSGGYIFYTFSTVHPI  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3837  QWLVIL  3854
             +WL+IL
Sbjct  268   EWLIIL  273


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  752  GANGTSGHI  778
            GAN TSG I
Sbjct  253  GANTTSGPI  261


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1171  GLYILT  1154
             G YILT
Sbjct  103   GVYILT  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  826  KAFSST  809
            KAF ST
Sbjct  54   KAFNST  59


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5071  GGFIFF  5054
             GG+IF+
Sbjct  191   GGYIFY  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2562  DPFHPCG  2542
             D FHP G
Sbjct  226   DTFHPSG  232


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  221  LVSLSL  204
            LV LSL
Sbjct  14   LVPLSL  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4125  LSVCI  4111
             L VCI
Sbjct  283   LAVCI  287


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2900  DLPN  2889
             DLPN
Sbjct  134   DLPN  137


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  731  VILADLIA  708
            +ILA L A
Sbjct  271  IILASLLA  278


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             TL TM
Sbjct  59    TLPTM  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6102  KLIISS  6085
             KL+I S
Sbjct  300   KLVINS  305


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3113  DMSIG  3099
             DM IG
Sbjct  356   DMKIG  360


>ref|NP_765975.1|  nuclear factor of activated T-cells, cytoplasmic 1 isoform C 
[Homo sapiens]
Length=930

 GENE ID: 4772 NFATC1 | nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 1 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  293  SPVAAPRLLP  264
            SP A PRLLP
Sbjct  874  SPTAGPRLLP  883


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  2366  QLGIPHPAG  2392
             +LG P+PAG
Sbjct  774   HLGLPQPAG  782


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
 Frame = -3

Query  9050  SEG-SPLPSP--AQ--ATPP  9006
             S+G SPLP P   Q  A PP
Sbjct  706   SQGLSPLPRPYYSQQLAMPP  725


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1921  METKNDR  1941
             ME K DR
Sbjct  629   MEAKTDR  635


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7655  SRSCDS  7638
             SRSC+S
Sbjct  166   SRSCNS  171


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  3335  TQESRWLANT  3306
             T +S WL NT
Sbjct  283   TDDS-WLGNT  291


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  4588  IIPNDLCFSS  4559
             II NDL  SS
Sbjct  918   IIRNDL--SS  925


 Score = 17.6 bits (34),  Expect(2) = 11542
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = -2

Query  9042  LATPQSRP-GHASLESP  8995
             L   + RP G   LESP
Sbjct  89    LSSGHTRPDGAPALESP  105


 Score = 15.5 bits (29),  Expect(2) = 11542
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 11/20 (55%)
 Frame = -2

Query  8895  TSTLTL-----------LSP  8869
             T TL L           LSP
Sbjct  141   TATLSLPSLEAYRDPSCLSP  160


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 47/79 (59%)
 Frame = +1

Query  1474  EAILG-TKERLLSVSIVAKKGTQPEIAGPL----GKRAV-----------GNVE------  1587
             EAIL  TK   L            EI  PL      RAV            ++E      
Sbjct  495   EAILSNTK--VL------------EI--PLLPENSMRAVIDCAGILKLRNSDIELRKGET  538

Query  1588  ---RKDTK*KIVLRDRLIF  1635
                RK+T      R RL+F
Sbjct  539   DIGRKNT------RVRLVF  551


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4734  RISSEVHI  4757
             RI S VH+
Sbjct  654   RITSPVHV  661


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  4831  PKC----QSLSPVCRP  4796
             P C    Q LSP  RP
Sbjct  700   PTCGPVSQGLSPLPRP  715


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  568  NDLSS  554
            NDLSS
Sbjct  921  NDLSS  925


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5141  PSVAL  5127
             PSVAL
Sbjct  331   PSVAL  335


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1418  SCLMAG  1401
             SCL AG
Sbjct  729   SCLVAG  734


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5818  SPPPSPQ  5798
             SP PSP+
Sbjct  269   SPTPSPH  275


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4194  PNSCLI  4177
             P SCL+
Sbjct  727   PSSCLV  732


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1749  PPQKQEP  1769
             PP  QEP
Sbjct  839   PPATQEP  845


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  511  CLQP  500
            CLQP
Sbjct  847  CLQP  850


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +3

Query  4719  ESPH--PRISSEVH  4754
             ESP   PR   EVH
Sbjct  873   ESPTAGPRLLPEVH  886


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8144  LPTPC  8130
             LP PC
Sbjct  52    LPAPC  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  606  RIEI  617
            RIEI
Sbjct  106  RIEI  109


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8256  TLSVPS  8239
             TLS PS
Sbjct  143   TLSLPS  148


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  1799  PQVTLWQRP  1825
             PQ   WQ P
Sbjct  187   PQTSPWQSP  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1139  QDYPSF  1122
             +DY SF
Sbjct  356   EDYSSF  361


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8483  YSSYQ  8497
             YSS+Q
Sbjct  358   YSSFQ  362


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2603  PFRKQ  2617
             PFR Q
Sbjct  649   PFRNQ  653


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7892  VRQGYSPL  7915
             V QG SPL
Sbjct  705   VSQGLSPL  712


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -1

Query  8446  RDAAPTLSAAGSARL  8402
             RD  PT   AG  RL
Sbjct  871   RDESPT---AG-PRL  881


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7161  SPRSSDLEE  7187
             SP   D EE
Sbjct  198   SPKTTDPEE  206


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             PSP  SP V
Sbjct  272   PSPHGSPRV  280


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +2

Query  3356  PLVKLW-YQLEKEP  3394
             P V L  Y LE EP
Sbjct  446   PIVQLHGY-LENEP  458


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -1

Query  9037  HSPVP-----PR  9017
             HSP P     PR
Sbjct  268   HSPTPSPHGSPR  279


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1074  FVPEGY  1057
             F PE Y
Sbjct  353   FAPEDY  358


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6082  HLFYHV  6065
             H FY+V
Sbjct  476   HAFYQV  481


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5227  AMEPNP  5210
             AM P+P
Sbjct  722   AMPPDP  727


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7819  IIHND  7833
             II ND
Sbjct  918   IIRND  922


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1054  VVPAMSLP  1031
             V PA+ LP
Sbjct  39    VSPALPLP  46


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = +1

Query  1795  LPSGHS-LATTPRHN  1836
             LP  HS L   P HN
Sbjct  45    LPTAHSTLP-APCHN  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7710  KNRKT  7724
             K RKT
Sbjct  321   KSRKT  325


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4468  KSTLE  4482
             K TLE
Sbjct  324   KTTLE  328


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7238  KIEPLG  7255
             K+EP G
Sbjct  336   KVEPVG  341


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  972  PILQL  958
            PI QL
Sbjct  446  PIVQL  450


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7167  RSSDLE  7184
             R SD E
Sbjct  527   RNSDIE  532


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8044  RSAEPVPL  8067
             RSA+  PL
Sbjct  577   RSAQELPL  584


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2074  LSQQIS  2057
             L QQ+S
Sbjct  809   LPQQVS  814


>ref|NP_619728.2|  nuclear factor of activated T-cells 5 isoform a [Homo sapiens]
 ref|NP_775321.1|  nuclear factor of activated T-cells 5 isoform a [Homo sapiens]
Length=1455

 GENE ID: 10725 NFAT5 | nuclear factor of activated T-cells 5,
tonicity-responsive [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -3

Query  2894  PNSISPL--TS  2868
             PNSISPL  TS
Sbjct  1088  PNSISPLQSTS  1098


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2074  LSQQISSN  2051
             L QQISSN
Sbjct  677   LQQQISSN  684


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  2613  FLKGSK-IF  2590
             FLKG K IF
Sbjct  394   FLKGTKVIF  402


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  7415  VQQQNNLLRAIEAQQHL  7465
             VQQ        EAQQ+L
Sbjct  722   VQQ------VLEAQQQL  732


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  2208  QISTNAFIFSSVN  2170
             QIS N  IF S N
Sbjct  680   QISSN--IFPSPN  690


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query  1089  LSSILF-VPEG  1060
             LSS+LF  P+G
Sbjct  732   LSSVLFSAPDG  742


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5545  FVAVSASS  5522
             F AVSASS
Sbjct  613   FPAVSASS  620


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1059  TLQEQI  1076
             TLQ+QI
Sbjct  676   TLQQQI  681


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1671  GNFLQ  1685
             GNFLQ
Sbjct  982   GNFLQ  986


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  7466  LQLTVWGIKQLQA  7504
             LQ T   I QLQA
Sbjct  695   LQNT---IQQLQA  704


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  2850  QL---SFSGST  2827
             QL   SF GST
Sbjct  701   QLQAGSFTGST  711


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5988  PVYPQT  6005
             PVY QT
Sbjct  854   PVYQQT  859


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 17/30 (56%)
 Frame = +3

Query  846  MFSALSEGATPQDLNTMLNTVGGHQAAMQM  935
            M SALS   T +D              MQM
Sbjct  862  MMSALS---TNED--------------MQM  874


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6481  TMYKCQHS  6504
             TM+  QHS
Sbjct  1154  TMFQSQHS  1161


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3442  LPVSCPIYI  3416
             LPVS  IY+
Sbjct  442   LPVSVGIYV  450


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4588  IIPNDL  4571
             IIPN L
Sbjct  511   IIPNAL  516


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  6928  ITVEKFPSTI-KT  6893
             +T EK  STI KT
Sbjct  536   VTAEKRSSTIFKT  548


 Score = 16.8 bits (32),  Expect(2) = 13791
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1690  DQSQQPHQ  1713
             +Q Q P+Q
Sbjct  1123  EQAQPPQQ  1130


 Score = 15.5 bits (29),  Expect(2) = 13791
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1745  NSPSE  1759
             NSPS+
Sbjct  1168  NSPSQ  1172


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8124  RSSTI  8110
             RSSTI
Sbjct  541   RSSTI  545


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3900  LSQLAT  3883
             LSQL T
Sbjct  161   LSQLTT  166


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1038  DIAGTT  1055
             DI GTT
Sbjct  285   DIEGTT  290


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  4056  PVSAGI---TSA  4030
             PVS GI   T A
Sbjct  443   PVSVGIYVVTNA  454


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 32/52 (61%)
 Frame = +1

Query  8407  ELSQQQIGWEQH--LETWKNMEQSQ----------------VA-----IQQL  8493
             E SQQQ    Q+  L+     EQ Q                V      IQQL
Sbjct  660   EASQQQ----QQSPLQ-----EQAQTLQQQISSNIFPSPNSVSQLQNTIQQL  702


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1665  RPGNFLQSRPE  1697
             RP N L  R E
Sbjct  780   RPDNLLPGRAE  790


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2096  PISPIET  2116
             PIS I+T
Sbjct  1111  PISHIQT  1117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3311  NTLSTM  3294
             NT+ TM
Sbjct  1198  NTMATM  1203


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  391   IFSHRSNSPPLN  356
             IF + SN  P+N
Sbjct  1232  IFHQQSNMAPMN  1243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2261  MDFQAQ  2244
             M FQ Q
Sbjct  1249  MQFQSQ  1254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6526  ASSIN  6540
             ASSIN
Sbjct  1426  ASSIN  1430


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7397  QLLSGIVQQQ  7426
             QL S  VQQ+
Sbjct  47    QLTSNTVQQH  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  2952  VP--LR-SLHNC  2926
             VP  L  SLH C
Sbjct  368   VPEILKKSLHSC  379


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1568  LFPRGPAISG  1539
             LF   PA+SG
Sbjct  878   LFSSPPAVSG  887


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4836  PDPNASLF  4813
             P P A LF
Sbjct  1339  PQPQATLF  1346


 Score = 15.1 bits (28),  Expect(2) = 31686
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4890  LADQL  4904
             L DQL
Sbjct  1390  LPDQL  1394


 Score = 15.1 bits (28),  Expect(2) = 31686
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4972  LALGVNIKQDI  5004
             LA  +N  Q+I
Sbjct  1425  LASSINTNQNI  1435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6582  TTSSS  6568
             TTSSS
Sbjct  9     TTSSS  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8053  EPVPLQ  8070
             EPV LQ
Sbjct  247   EPVVLQ  252


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5841  IPRSMV  5824
             IP SM+
Sbjct  521   IPSSMI  526


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             QT  LQ QI
Sbjct  675   QT--LQQQI  681


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7709  QLRSVL  7692
             QL SVL
Sbjct  731   QLSSVL  736


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQT+
Sbjct  928   VFQTM  932


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8902  LSNLHSNT  8879
             + NL+ NT
Sbjct  1071  MNNLQTNT  1078


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6449  LESQNQP  6429
             LE +N+P
Sbjct  242   LEGHNEP  248


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1618  RDRLIF  1635
             R RL+F
Sbjct  334   RARLVF  339


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4278  RLNILR  4295
             R NI+R
Sbjct  340   RVNIMR  345


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1770  IDKELY  1787
             ID EL+
Sbjct  418   IDMELF  423


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4317  SSTILK  4334
             SSTI K
Sbjct  542   SSTIFK  547


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  819  KAFSPE  836
            KA+ PE
Sbjct  592  KAYNPE  597


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4918  TLTVFQT  4938
             TLT  QT
Sbjct  598   TLTTIQT  604


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3014  REIL  3025
             REIL
Sbjct  643   REIL  646


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  4127  GSNFTGAT  4150
             GS FTG T
Sbjct  705   GS-FTGST  711


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3150  ENMQE  3164
             EN QE
Sbjct  744   ENVQE  748


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5554  QNSQTHQ  5574
             QNS T+Q
Sbjct  958   QNSGTQQ  964


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7086  MGGAYIAFPT  7057
             MGGA   F T
Sbjct  1     MGGACSSFTT  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2561  SPAIFQSSMT  2590
             SP I+  S T
Sbjct  13    SPTIYSTSVT  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1407  HKARVLAE  1430
             H AR L E
Sbjct  216   HRARYLTE  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8953  RTADIE  8970
             R AD+E
Sbjct  315   RNADVE  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2555  KGSPAIFQ  2578
             KG   IFQ
Sbjct  396   KGTKVIFQ  403


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8721  YTPGP  8735
             YTP P
Sbjct  465   YTPDP  469


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2601  SLLENKIQ  2624
             S L+N IQ
Sbjct  693   SQLQNTIQ  700


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6452  ILESQNQ  6432
             +LE Q Q
Sbjct  725   VLEAQQQ  731


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4805  MQTPIC  4788
             MQ  IC
Sbjct  824   MQQSIC  829


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4598  SVFHNP  4581
             S FH P
Sbjct  1015  SLFHSP  1020


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4485  DQQS  4496
             DQQS
Sbjct  1058  DQQS  1061


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  4823  PVSFSCMQTPI  4791
             P S S +QT I
Sbjct  1302  PASMSALQTSI  1312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2609  RKQNP  2623
             RK NP
Sbjct  126   RKRNP  130


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8342  LIAKSF  8325
             LI K F
Sbjct  389   LIGKNF  394


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7199  DNWRSE  7216
             + W SE
Sbjct  410   NSWKSE  415


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8345  HLIAK  8331
             HLI K
Sbjct  427   HLIVK  431


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7863  TILKPTK  7843
             TI K TK
Sbjct  544   TIFKTTK  550


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6979  FSTPS  6965
             FS PS
Sbjct  571   FSSPS  575


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1000  LLHQA  1014
             LL+QA
Sbjct  628   LLQQA  632


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 0/15 (0%)
 Frame = +3

Query  6660  QDPTTIQEKESVSRE  6704
             Q  T  Q  E  SRE
Sbjct  630   QQATQFQTRETQSRE  644


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6068  MVEQMHEDI  6094
             MV +M++ I
Sbjct  820   MVMEMQQSI  828


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6938  LFNST  6952
             LF ST
Sbjct  947   LFSST  951


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7418  QQQNN  7432
             QQQ N
Sbjct  963   QQQGN  967


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  688   QQLTQDT  708
             Q L Q+T
Sbjct  1006  QNLSQET  1012


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2028  TNTV  2017
             TNTV
Sbjct  1076  TNTV  1079


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8467  QSQVAIQQLP  8496
             Q QVA   LP
Sbjct  1134  QPQVALGSLP  1143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  973   SHSAASSL  950
             S+S  SSL
Sbjct  1253  SQSTVSSL  1260


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4198  SLQSP  4212
             SLQ P
Sbjct  1259  SLQNP  1263


>pdb|1ZVO|A  Chain A, Semi-Extended Solution Structure Of Human Myeloma Immunoglobulin 
D Determined By Constrained X-Ray Scattering
 pdb|1ZVO|B  Chain B, Semi-Extended Solution Structure Of Human Myeloma Immunoglobulin 
D Determined By Constrained X-Ray Scattering
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  160   GVETTTPS-KQ  169


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3583  YYVY  3572
             YYVY
Sbjct  32    YYVY  35


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  193   YSCQVTH  199


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  191   RSYSCQ  196


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  122  PS----SEELQA--NK-ATLVC  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7192  ISSSRSED  7169
             IS  RSED
Sbjct  76    ISGLRSED  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5422  SQPKTA  5439
             SQPK A
Sbjct  109   SQPKAA  114


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 7/24 (29%)
 Frame = +2

Query  749  PGANGTSGH---IT*NFKCMGKSS  811
            P A GT G+   I     C G SS
Sbjct  8    PSASGTPGQRVTIS----CFGSSS  27


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  114   APSVTL  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8174  YWSQEL  8191
             YW Q+L
Sbjct  35    YWYQQL  40


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  210  KGNQRSS  230
            K NQR S
Sbjct  51   KDNQRPS  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8889  TLTLLS  8872
             TLT LS
Sbjct  104   TLTVLS  109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 3/16 (18%)
 Frame = -1

Query  4186  LL---DSRPPTGGPNR  4148
             LL   D   P G P+R
Sbjct  47    LLIYKDNQRPSGVPDR  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  105   LTVLSQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  155

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  156   PVKAGV  161


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  115   PSVTLF  120


>emb|CAE45757.1|  immune associated nucleotide 6c [Homo sapiens]
Length=212

 GENE ID: 474344 GIMAP6 | GTPase, IMAP family member 6 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 15/38 (39%)
 Frame = -2

Query  7578  MS-FPEQPQIP-RSC*SFRYLSTARILAWSCLMPQTVS  7471
             M  FP    IP  SC         RIL WSC   Q VS
Sbjct  1     MNKFP--RRIPQKSC--------PRILCWSC---QEVS  25


 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 14/29 (48%)
 Frame = +1

Query  8728  QGQGS-DIH*P-----LDGATS*YQLSQI  8796
             QGQGS D+  P     L+G      LSQI
Sbjct  175   QGQGSEDV--PGEESWLEG------LSQI  195


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2461  RLQEVY  2478
             RLQEV+
Sbjct  65    RLQEVF  70


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8300  PRRIRQ  8317
             PRRI Q
Sbjct  5     PRRIPQ  10


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2429  PHPVLL  2412
             PH VLL
Sbjct  43    PHAVLL  48


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8644  FTPKED  8661
             FT KED
Sbjct  82    FTRKED  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2890  LGKSDL  2907
             LGK DL
Sbjct  207   LGKADL  212


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2912  LGKSDL  2895
             LGK DL
Sbjct  207   LGKADL  212


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5216  WLHGLGQ  5236
             WL GL Q
Sbjct  188   WLEGLSQ  194


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  105  CARLLC  122
            C R LC
Sbjct  13   CPRILC  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4875  QVDPELAD  4898
             +V PE AD
Sbjct  23    EVSPEVAD  30


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5304  SCCRIL  5287
             SC RIL
Sbjct  12    SCPRIL  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6005  PNPQEVVLV  6031
             P P+ V LV
Sbjct  41    PGPHAVLLV  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6138  PHSVL  6152
             PH VL
Sbjct  43    PHAVL  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             +LREL
Sbjct  131   QLREL  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  5939  LMHKIE---W  5919
             LM K+E   W
Sbjct  135   LMEKVEAIMW  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7490  KQLQAR  7507
             K+LQ R
Sbjct  166   KELQER  171


>pdb|1Q1J|L  Chain L, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d 
In Complex With V3 Peptide
 pdb|1Q1J|M  Chain M, Crystal Structure Analysis Of Anti-Hiv-1 Fab 447-52d 
In Complex With V3 Peptide
Length=215


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  163   GVETTTPS-KQ  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5446  WYKQF  5432
             WY QF
Sbjct  36    WYQQF  40


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  196   YSCQVTH  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  194   RSYSCQ  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4049  ETGQETAYF  4075
             +TG E  YF
Sbjct  80    QTGDEADYF  88


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  125  PS----SEELQA--NK-ATLVC  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +3

Query  4776  LVITTYWGLHTGE  4814
             L IT   GL+TG+
Sbjct  74    LGIT---GLQTGD  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5422  SQPKTA  5439
             SQPK A
Sbjct  112   SQPKAA  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  117   APSVTL  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  108   LTVLSQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  158

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  159   PVKAGV  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  41   PGTAPKLL  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  118   PSVTLF  123


>pdb|1NL0|L  Chain L, Crystal Structure Of Human Factor Ix Gla Domain In Complex 
Of An Inhibitory Antibody, 10c12
Length=213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  496  DVSNRP  479
            DVS RP
Sbjct  51   DVSKRP  56


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3954  IPGLQS  3937
             I GLQS
Sbjct  76    ISGLQS  81


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  107   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  157

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  158   PVKAGV  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  194  CSGAT  180
            CSG T
Sbjct  22   CSGST  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  4177  SRPPTGGPNR  4148
             S  P G P+R
Sbjct  53    SKRPSGVPDR  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|1RZF|L  Chain L, Crystal Structure Of Human Anti-Hiv-1 Gp120-Reactive 
Antibody E51
Length=213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  162   GVETTTPS-KQ  171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  8900  QPPSISSRGPRAASG  8944
             QPPS+S     AA G
Sbjct  6     QPPSVS-----AAPG  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5446  WYKQF  5432
             WY QF
Sbjct  36    WYQQF  40


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  195   YSCQVTH  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  193   RSYSCQ  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  124  PS----SEELQA--NK-ATLVC  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4775  IGNNNI  4792
             IGNN++
Sbjct  29    IGNNDV  34


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +3

Query  4776  LVITTYWGLHTGE  4814
             L IT   GL+TG+
Sbjct  74    LGIT---GLQTGD  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  116   APSVTL  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8972  SSMSAV  8955
             SS+SAV
Sbjct  94    SSLSAV  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  6405  QFPYII--VPRLV  6437
             QFP     VP LV
Sbjct  39    QFP---GTVPKLV  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  117   PSVTLF  122


>pdb|2FH4|A  Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
 pdb|2FH4|B  Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
 pdb|2FH4|C  Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
Length=344


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 26/50 (52%)
 Frame = +3

Query  4293  RQ-Q--YKWQ---------YSSTILK-----EKGGLGGT------VQGKE  4373
             RQ Q  Y WQ           S IL      E   LGGT      VQGKE
Sbjct  47    RQGQIIYNWQGAQSTQDEVAASAILTAQLDEE---LGGTPVQSRVVQGKE  93


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7375  DADGTGQ  7395
             D DGTGQ
Sbjct  2     DDDGTGQ  8


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4537  IILYYY  4520
             IILY Y
Sbjct  37    IILYNY  42


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8121  FWDAGGGK  8144
             FW+A GGK
Sbjct  203   FWEALGGK  210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 7/20 (35%)
 Frame = +2

Query  6074  EQMHEDI----ISL---WDQ  6112
             E M+ED     + L   WDQ
Sbjct  249   ELMQEDLATDDVMLLDTWDQ  268


 Score = 18.5 bits (36),  Expect(2) =  6054
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6968  WSTEGSN  6988
             W  EGSN
Sbjct  12    WRIEGSN  18


 Score = 16.8 bits (32),  Expect(2) =  6054
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7034  QIINMWQ  7054
             QII  WQ
Sbjct  50    QIIYNWQ  56


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  1688  QTRANS--PTR  1714
             Q RANS   TR
Sbjct  129   QVRANSAGATR  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8517  EAQEEE  8534
             + QEEE
Sbjct  276   DSQEEE  281


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7318  SFVPWVLG  7341
             SFV W LG
Sbjct  317   SFVGWFLG  324


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6394  YLWTG  6380
             YLW G
Sbjct  165   YLWVG  169


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8621  KGGTGR  8638
             KGGT R
Sbjct  110   KGGTSR  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3832  PITVI  3818
             PITV+
Sbjct  305   PITVV  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4660  TKLFHV  4643
             T LF+V
Sbjct  125   TRLFQV  130


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5444  PIAIVK  5461
             PI +VK
Sbjct  305   PITVVK  310


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8105  TRIVELL  8125
             TR VE L
Sbjct  138   TRAVEVL  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2311  KISRF  2325
             KI RF
Sbjct  237   KIGRF  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7541  VDPL  7530
             VDPL
Sbjct  332   VDPL  335


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  543  TGSEEL  560
            TG +EL
Sbjct  178  TGAQEL  183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  3278  FVW  3270
             FVW
Sbjct  270   FVW  272


>sp|Q9UKJ0.1|PILRB_HUMAN  RecName: Full=Paired immunoglobulin-like type 2 receptor beta; 
AltName: Full=Activating receptor PILR-beta; AltName: Full=Cell 
surface receptor FDFACT; Flags: Precursor
Length=227

 GENE ID: 29990 PILRB | paired immunoglobin-like type 2 receptor beta
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/10 (90%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = +3

Query  7662  GTEKLTITQA  7691
             GT KLTITQA
Sbjct  144   GT-KLTITQA  152


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  4231  FYYSLTLGIVGN  4196
             FYY   L IV N
Sbjct  55    FYYPWELAIVPN  66


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 13/25 (52%)
 Frame = +3

Query  1218  DYVDRFYKTLRAEQASQEVKNWMTE  1292
             DYV+R +  L          NW TE
Sbjct  92    DYVNRLF--L----------NW-TE  103


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             LPL+L L
Sbjct  7     LPLLLLL  13


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6032  LPILLL  6015
             LP LLL
Sbjct  7     LPLLLL  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3077  LLLSLLM  3057
             LLL LL+
Sbjct  5     LLLPLLL  11


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -3

Query  2156  LLGHPFLALILLVQ  2115
             LL    L L LL Q
Sbjct  5     LL----LPLLLLLQ  14


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/21 (28%), Positives = 7/21 (33%), Gaps = 13/21 (61%)
 Frame = -1

Query  3919  FSF*LTFITAGYYFFCYYRWQ  3857
             FSF             YY W+
Sbjct  53    FSF-------------YYPWE  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 10/20 (50%)
 Frame = +3

Query  4839  VSIEWRKKR--------YST  4874
             V I WR  R        YST
Sbjct  67    VRISWR--RGHFHGQSFYST  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7033  FYSAWE  7016
             FY  WE
Sbjct  55    FYYPWE  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7848  TKPPTI  7831
             T PP I
Sbjct  84    TRPPSI  89


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2928  NYVNSL  2945
             +YVN L
Sbjct  92    DYVNRL  97


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -3

Query  761  HLPLD--VLHYRVILA  720
            HL LD  +   RV LA
Sbjct  183  HLSLDTAI---RVALA  195


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6270  PLMLVLIL  6247
             PL+L L L
Sbjct  4     PLLLPLLL  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8491  LPMLL  8505
             LP+LL
Sbjct  7     LPLLL  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7002  VTQSPSHAE  7028
             VT+S  H E
Sbjct  172   VTESKGHSE  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5260  IPISF  5246
             IP SF
Sbjct  51    IPFSF  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8965  IELATR  8982
             +EL TR
Sbjct  127   VELDTR  132


>sp|P20138.2|CD33_HUMAN  RecName: Full=Myeloid cell surface antigen CD33; AltName: Full=Sialic 
acid-binding Ig-like lectin 3; Short=Siglec-3; AltName: 
Full=gp67; AltName: CD_antigen=CD33; Flags: Precursor
Length=364

 GENE ID: 945 CD33 | CD33 molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 12/18 (66%), Positives = 12/18 (66%), Gaps = 4/18 (22%)
 Frame = -2

Query  6777  ALLMLQCACLIFPIFPIV  6724
             ALL L C CLIF  F IV
Sbjct  269   ALLAL-CLCLIF--F-IV  282


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3716  LCVLVP  3699
             LCVLVP
Sbjct  35    LCVLVP  40


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5298  NNCCLSI  5318
             NNC LSI
Sbjct  99    NNCSLSI  105


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = -3

Query  1610  IFHLVSFLSTFPTALFPR  1557
             IF   S LS  PT L PR
Sbjct  176   IF---SWLSAAPTSLGPR  190


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8701  TSLISRTTH  8727
             TSL  RTTH
Sbjct  185   TSLGPRTTH  193


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6657  VQDPTTIQE  6683
             VQ+  T+QE
Sbjct  25    VQESVTVQE  33


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2905  NLTCPIQF  2882
             NLTC + F
Sbjct  209   NLTCQVKF  216


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +2

Query  611  RDKRHQGS--FRQDRGRAK  661
            RD    GS  FR +RG  K
Sbjct  111  RDN---GSYFFRMERGSTK  126


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4994  LIFTPR  4977
             LI TPR
Sbjct  197   LIITPR  202


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8511  WLEAQE  8528
             WL+ QE
Sbjct  22    WLQVQE  27


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6609  LSVKLTDL  6586
             LSV  TDL
Sbjct  134   LSVHVTDL  141


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7308  TALFSLC  7288
             TAL  LC
Sbjct  268   TALLALC  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLL LL
Sbjct  5     LLLPLL  10


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8936  QLSGHV  8919
             QLS HV
Sbjct  133   QLSVHV  138


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4797  PNMLLLP  4777
             P +LLLP
Sbjct  2     PLLLLLP  8


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2350  RLLGSSIRN  2376
             RLLG   RN
Sbjct  91    RLLGDPSRN  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6828  NCSL  6817
             NCSL
Sbjct  100   NCSL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1840  DRGATK  1857
             +RG TK
Sbjct  121   ERGSTK  126


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4474  WISAVP  4457
             W SA P
Sbjct  179   WLSAAP  184


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             +PL+L L
Sbjct  1     MPLLLLL  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6032  LPILLL  6015
             +P LLL
Sbjct  1     MPLLLL  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7395  LACTVS  7378
             L C VS
Sbjct  161   LTCSVS  166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2558  GSPAIF  2575
             G P IF
Sbjct  172   GTPPIF  177


>ref|NP_006590.1|  nuclear factor of activated T-cells 5 isoform c [Homo sapiens]
Length=1531

 GENE ID: 10725 NFAT5 | nuclear factor of activated T-cells 5,
tonicity-responsive [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -3

Query  2894  PNSISPL--TS  2868
             PNSISPL  TS
Sbjct  1164  PNSISPLQSTS  1174


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2074  LSQQISSN  2051
             L QQISSN
Sbjct  753   LQQQISSN  760


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  2613  FLKGSK-IF  2590
             FLKG K IF
Sbjct  470   FLKGTKVIF  478


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  7415  VQQQNNLLRAIEAQQHL  7465
             VQQ        EAQQ+L
Sbjct  798   VQQ------VLEAQQQL  808


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  2208  QISTNAFIFSSVN  2170
             QIS N  IF S N
Sbjct  756   QISSN--IFPSPN  766


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query  1089  LSSILF-VPEG  1060
             LSS+LF  P+G
Sbjct  808   LSSVLFSAPDG  818


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5545  FVAVSASS  5522
             F AVSASS
Sbjct  689   FPAVSASS  696


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1059  TLQEQI  1076
             TLQ+QI
Sbjct  752   TLQQQI  757


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1671  GNFLQ  1685
             GNFLQ
Sbjct  1058  GNFLQ  1062


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +1

Query  4201  LQSPK---SRSSRIYE  4239
             L+SPK   SR S +Y+
Sbjct  15    LESPKSLYSRES-VYD  29


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  7466  LQLTVWGIKQLQA  7504
             LQ T   I QLQA
Sbjct  771   LQNT---IQQLQA  780


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  2850  QL---SFSGST  2827
             QL   SF GST
Sbjct  777   QLQAGSFTGST  787


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5988  PVYPQT  6005
             PVY QT
Sbjct  930   PVYQQT  935


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 17/30 (56%)
 Frame = +3

Query  846  MFSALSEGATPQDLNTMLNTVGGHQAAMQM  935
            M SALS   T +D              MQM
Sbjct  938  MMSALS---TNED--------------MQM  950


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6481  TMYKCQHS  6504
             TM+  QHS
Sbjct  1230  TMFQSQHS  1237


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3442  LPVSCPIYI  3416
             LPVS  IY+
Sbjct  518   LPVSVGIYV  526


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4588  IIPNDL  4571
             IIPN L
Sbjct  587   IIPNAL  592


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  6928  ITVEKFPSTI-KT  6893
             +T EK  STI KT
Sbjct  612   VTAEKRSSTIFKT  624


 Score = 16.8 bits (32),  Expect(2) = 13533
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1690  DQSQQPHQ  1713
             +Q Q P+Q
Sbjct  1199  EQAQPPQQ  1206


 Score = 15.5 bits (29),  Expect(2) = 13533
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1745  NSPSE  1759
             NSPS+
Sbjct  1244  NSPSQ  1248


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8124  RSSTI  8110
             RSSTI
Sbjct  617   RSSTI  621


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4548  FMSLLS  4531
             F SLLS
Sbjct  5     FISLLS  10


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3900  LSQLAT  3883
             LSQL T
Sbjct  237   LSQLTT  242


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1038  DIAGTT  1055
             DI GTT
Sbjct  361   DIEGTT  366


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  4056  PVSAGI---TSA  4030
             PVS GI   T A
Sbjct  519   PVSVGIYVVTNA  530


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 15/52 (28%), Positives = 17/52 (32%), Gaps = 32/52 (61%)
 Frame = +1

Query  8407  ELSQQQIGWEQH--LETWKNMEQSQ----------------VA-----IQQL  8493
             E SQQQ    Q+  L+     EQ Q                V      IQQL
Sbjct  736   EASQQQ----QQSPLQ-----EQAQTLQQQISSNIFPSPNSVSQLQNTIQQL  778


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1665  RPGNFLQSRPE  1697
             RP N L  R E
Sbjct  856   RPDNLLPGRAE  866


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2096  PISPIET  2116
             PIS I+T
Sbjct  1187  PISHIQT  1193


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3311  NTLSTM  3294
             NT+ TM
Sbjct  1274  NTMATM  1279


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  391   IFSHRSNSPPLN  356
             IF + SN  P+N
Sbjct  1308  IFHQQSNMAPMN  1319


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2261  MDFQAQ  2244
             M FQ Q
Sbjct  1325  MQFQSQ  1330


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6526  ASSIN  6540
             ASSIN
Sbjct  1502  ASSIN  1506


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7397  QLLSGIVQQQ  7426
             QL S  VQQ+
Sbjct  123   QLTSNTVQQH  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  2952  VP--LR-SLHNC  2926
             VP  L  SLH C
Sbjct  444   VPEILKKSLHSC  455


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1568  LFPRGPAISG  1539
             LF   PA+SG
Sbjct  954   LFSSPPAVSG  963


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4836  PDPNASLF  4813
             P P A LF
Sbjct  1415  PQPQATLF  1422


 Score = 15.1 bits (28),  Expect(2) = 31253
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4890  LADQL  4904
             L DQL
Sbjct  1466  LPDQL  1470


 Score = 15.1 bits (28),  Expect(2) = 31253
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4972  LALGVNIKQDI  5004
             LA  +N  Q+I
Sbjct  1501  LASSINTNQNI  1511


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3839  MASDF  3853
             M SDF
Sbjct  1     MPSDF  5


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6582  TTSSS  6568
             TTSSS
Sbjct  85    TTSSS  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8053  EPVPLQ  8070
             EPV LQ
Sbjct  323   EPVVLQ  328


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5841  IPRSMV  5824
             IP SM+
Sbjct  597   IPSSMI  602


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             QT  LQ QI
Sbjct  751   QT--LQQQI  757


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7709  QLRSVL  7692
             QL SVL
Sbjct  807   QLSSVL  812


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQT+
Sbjct  1004  VFQTM  1008


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8902  LSNLHSNT  8879
             + NL+ NT
Sbjct  1147  MNNLQTNT  1154


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6449  LESQNQP  6429
             LE +N+P
Sbjct  318   LEGHNEP  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1618  RDRLIF  1635
             R RL+F
Sbjct  410   RARLVF  415


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4278  RLNILR  4295
             R NI+R
Sbjct  416   RVNIMR  421


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1770  IDKELY  1787
             ID EL+
Sbjct  494   IDMELF  499


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4317  SSTILK  4334
             SSTI K
Sbjct  618   SSTIFK  623


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  819  KAFSPE  836
            KA+ PE
Sbjct  668  KAYNPE  673


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4918  TLTVFQT  4938
             TLT  QT
Sbjct  674   TLTTIQT  680


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3014  REIL  3025
             REIL
Sbjct  719   REIL  722


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  4127  GSNFTGAT  4150
             GS FTG T
Sbjct  781   GS-FTGST  787


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3150  ENMQE  3164
             EN QE
Sbjct  820   ENVQE  824


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5554  QNSQTHQ  5574
             QNS T+Q
Sbjct  1034  QNSGTQQ  1040


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7086  MGGAYIAFPT  7057
             MGGA   F T
Sbjct  77    MGGACSSFTT  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2561  SPAIFQSSMT  2590
             SP I+  S T
Sbjct  89    SPTIYSTSVT  98


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1407  HKARVLAE  1430
             H AR L E
Sbjct  292   HRARYLTE  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8953  RTADIE  8970
             R AD+E
Sbjct  391   RNADVE  396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2555  KGSPAIFQ  2578
             KG   IFQ
Sbjct  472   KGTKVIFQ  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8721  YTPGP  8735
             YTP P
Sbjct  541   YTPDP  545


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2601  SLLENKIQ  2624
             S L+N IQ
Sbjct  769   SQLQNTIQ  776


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6452  ILESQNQ  6432
             +LE Q Q
Sbjct  801   VLEAQQQ  807


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4805  MQTPIC  4788
             MQ  IC
Sbjct  900   MQQSIC  905


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4598  SVFHNP  4581
             S FH P
Sbjct  1091  SLFHSP  1096


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4485  DQQS  4496
             DQQS
Sbjct  1134  DQQS  1137


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  4823  PVSFSCMQTPI  4791
             P S S +QT I
Sbjct  1378  PASMSALQTSI  1388


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4395  SVAIMS  4378
             SVA MS
Sbjct  44    SVASMS  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6857  QSSGGD-----PEIV  6886
             Q SGG+     P +V
Sbjct  50    QTSGGEAGSPPPAVV  64


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2609  RKQNP  2623
             RK NP
Sbjct  202   RKRNP  206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8342  LIAKSF  8325
             LI K F
Sbjct  465   LIGKNF  470


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7199  DNWRSE  7216
             + W SE
Sbjct  486   NSWKSE  491


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8345  HLIAK  8331
             HLI K
Sbjct  503   HLIVK  507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7863  TILKPTK  7843
             TI K TK
Sbjct  620   TIFKTTK  626


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6979  FSTPS  6965
             FS PS
Sbjct  647   FSSPS  651


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1000  LLHQA  1014
             LL+QA
Sbjct  704   LLQQA  708


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 0/15 (0%)
 Frame = +3

Query  6660  QDPTTIQEKESVSRE  6704
             Q  T  Q  E  SRE
Sbjct  706   QQATQFQTRETQSRE  720


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6068  MVEQMHEDI  6094
             MV +M++ I
Sbjct  896   MVMEMQQSI  904


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6938  LFNST  6952
             LF ST
Sbjct  1023  LFSST  1027


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7418  QQQNN  7432
             QQQ N
Sbjct  1039  QQQGN  1043


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  688   QQLTQDT  708
             Q L Q+T
Sbjct  1082  QNLSQET  1088


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2028  TNTV  2017
             TNTV
Sbjct  1152  TNTV  1155


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8467  QSQVAIQQLP  8496
             Q QVA   LP
Sbjct  1210  QPQVALGSLP  1219


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  973   SHSAASSL  950
             S+S  SSL
Sbjct  1329  SQSTVSSL  1336


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4198  SLQSP  4212
             SLQ P
Sbjct  1335  SLQNP  1339


>pdb|1F2Q|A  Chain A, Crystal Structure Of The Human High-Affinity Ige Receptor
 pdb|1J86|A  Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Monoclinic Crystal Form 2
 pdb|1J86|B  Chain B, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Monoclinic Crystal Form 2
Length=176


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +2

Query  8126  GRRGW-----------EALKYW  8158
             G R W           EALKYW
Sbjct  109   GWRNWDVYKVIYYKDGEALKYW  130


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6487  YKCQH  6501
             YKCQH
Sbjct  66    YKCQH  70


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6554  NGSLAEE  6574
             NGSL EE
Sbjct  42    NGSLSEE  48


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8759  WMVLQAS  8779
             W+ LQAS
Sbjct  87    WLLLQAS  93


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 13/26 (50%)
 Frame = +1

Query  2035  YTCQHNWKKSVD----------SDWL  2082
             Y CQH     V+          SDWL
Sbjct  66    YKCQH---QQVNESEPVYLEVFSDWL  88


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4713  DVYKTI  4696
             DVYK I
Sbjct  114   DVYKVI  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7917  DNGEYPC  7897
             D GEY C
Sbjct  62    DSGEYKC  68


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -2

Query  3378  WYHNFTKGGVL---TNS  3337
             W+HN    G L   TNS
Sbjct  39    WFHN----GSLSEETNS  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4614  VWQVD  4628
             VWQ D
Sbjct  155   VWQLD  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3427  PIYIEGF  3407
             P+Y E F
Sbjct  78    PVYLEVF  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3759  ESGKYY  3776
             +SG YY
Sbjct  145   DSGTYY  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             V LTC
Sbjct  22    VTLTC  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1663  EGQGIFFR  1686
             EGQ  F R
Sbjct  99    EGQPLFLR  106


>ref|NP_443122.3|  N-acetylmuramoyl-L-alanine amidase precursor [Homo sapiens]
Length=576

 GENE ID: 114770 PGLYRP2 | peptidoglycan recognition protein 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  8023  ILGTYLGRSAEP  8058
             ILG YL R  EP
Sbjct  281   ILGDYLSRTPEP  292


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -3

Query  5918  WLL--PSTQVPHNRL  5880
             WL+  P    PHNRL
Sbjct  53    WLMSAPNS-GPHNRL  66


 Score = 19.3 bits (38),  Expect(2) =  1762
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7545  SWGFGVA  7565
             S GFGVA
Sbjct  475   SRGFGVA  481


 Score = 18.0 bits (35),  Expect(2) =  1762
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7465  VATHSLGH  7488
             V  H LGH
Sbjct  466   VGAHTLGH  473


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8053  EPVPLQL  8073
             EPV LQL
Sbjct  347   EPVHLQL  353


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1952  LQFPLSFL  1929
             LQ PL FL
Sbjct  400   LQLPLGFL  407


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1128  WIILGL  1145
             WI LGL
Sbjct  7     WILLGL  12


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5345  SA--MSTPNS  5322
             SA  MS PNS
Sbjct  51    SAWLMSAPNS  60


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 8/25 (32%)
 Frame = -2

Query  4086  NFKRKYAVSCPVSAGITSASIYPLA  4012
             NF R         A  TSASI  LA
Sbjct  317   NFRRQNG------AALTSASI--LA  333


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  4833  DPNASL----FL  4810
             DP ASL    FL
Sbjct  262   DPKASLLTMAFL  273


 Score = 17.2 bits (33),  Expect(2) =  9445
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8192  LVPDSNTV  8169
             L PD  TV
Sbjct  112   LAPDGSTV  119


 Score = 16.8 bits (32),  Expect(2) =  9445
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = -2

Query  8307  LLGMWRIALQA----PC  8269
             LLG W   L A    PC
Sbjct  70    LLGAW--SLNATELDPC  84


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 12/27 (44%)
 Frame = -1

Query  1807  DLREVKGYSSLSIGSCF*GGVVVSTPD  1727
             D RE K Y           GVV   PD
Sbjct  101   DVREGKEY-----------GVVLA-PD  115


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/26 (30%), Positives = 9/26 (34%), Gaps = 16/26 (61%)
 Frame = +2

Query  5798  LWRWGWRWGTMLLGMLMICSATEKLW  5875
             LW         LLG+L        LW
Sbjct  6     LW--------ILLGLL--------LW  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -2

Query  7026  LHGRVIVSLP  6997
             L+GR ++ LP
Sbjct  132   LQGRRVINLP  141


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8598  LQLPCKS  8578
             LQL C S
Sbjct  351   LQLQCMS  357


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2086  SATNLSQQI  2060
             SA  L QQ+
Sbjct  328   SASILAQQV  336


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  247  PSPASRELL  221
            P P S ELL
Sbjct  83   PCPLSPELL  91


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  9036  TPQSRPGHASL  9004
             TP+ RP   SL
Sbjct  289   TPEPRP---SL  296


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4665  HHMYV  4679
             HH YV
Sbjct  410   HHTYV  414


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3071  LSLLM  3057
             L LLM
Sbjct  23    LPLLM  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3408  SAPTM  3394
             S PTM
Sbjct  210   SPPTM  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4584  SLMIFAFL  4561
             SL+  AFL
Sbjct  266   SLLTMAFL  273


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  130  VTRDP  144
            V RDP
Sbjct  308  VARDP  312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3180  VWAPLIL  3160
             VW  L+L
Sbjct  336   VWGTLVL  342


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1084  IHPIC  1070
             IHP C
Sbjct  382   IHPRC  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5190  KLLDIFLGF  5216
             KLL   LGF
Sbjct  398   KLLQLPLGF  406


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9126  RELPGSDL  9103
             R LP  DL
Sbjct  568   RTLPATDL  575


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  41   RELPGSDL  18
            R LP  DL
Sbjct  568  RTLPATDL  575


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3483  LPLL  3472
             LPLL
Sbjct  23    LPLL  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3209  LPLL  3198
             LPLL
Sbjct  23    LPLL  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5960  LYHML  5946
             LYH L
Sbjct  66    LYHFL  70


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8946  TPDA  8935
             TPDA
Sbjct  189   TPDA  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5472  KATLFTIA  5449
             KA L T A
Sbjct  264   KASLLTMA  271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +2

Query  6545  LL----LNGSL  6565
             LL    LNG L
Sbjct  267   LLTMAFLNGAL  277


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3698  WVPAH  3712
             WV AH
Sbjct  465   WVGAH  469


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  255  KRARQE  272
            KR R E
Sbjct  559  KRSRRE  564


>pdb|1J87|A  Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Hexagonal Crystal Form 1
Length=172


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +2

Query  8126  GRRGW-----------EALKYW  8158
             G R W           EALKYW
Sbjct  109   GWRNWDVYKVIYYKDGEALKYW  130


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6487  YKCQH  6501
             YKCQH
Sbjct  66    YKCQH  70


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6554  NGSLAEE  6574
             NGSL EE
Sbjct  42    NGSLSEE  48


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8759  WMVLQAS  8779
             W+ LQAS
Sbjct  87    WLLLQAS  93


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 13/26 (50%)
 Frame = +1

Query  2035  YTCQHNWKKSVD----------SDWL  2082
             Y CQH     V+          SDWL
Sbjct  66    YKCQH---QQVNESEPVYLEVFSDWL  88


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4713  DVYKTI  4696
             DVYK I
Sbjct  114   DVYKVI  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7917  DNGEYPC  7897
             D GEY C
Sbjct  62    DSGEYKC  68


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -2

Query  3378  WYHNFTKGGVL---TNS  3337
             W+HN    G L   TNS
Sbjct  39    WFHN----GSLSEETNS  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4614  VWQVD  4628
             VWQ D
Sbjct  155   VWQLD  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3427  PIYIEGF  3407
             P+Y E F
Sbjct  78    PVYLEVF  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3759  ESGKYY  3776
             +SG YY
Sbjct  145   DSGTYY  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             V LTC
Sbjct  22    VTLTC  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1663  EGQGIFFR  1686
             EGQ  F R
Sbjct  99    EGQPLFLR  106


>ref|NP_005891.1|  mothers against decapentaplegic homolog 1 [Homo sapiens]
 ref|NP_001003688.1|  mothers against decapentaplegic homolog 1 [Homo sapiens]
Length=465

 GENE ID: 4086 SMAD1 | SMAD family member 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 6/20 (30%)
 Frame = +3

Query  4905  IHLYY-----F-DCFSDSAI  4946
             +HLYY     + +C SDS I
Sbjct  334   VHLYYVGGEVYAECLSDSSI  353


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -3

Query  5114  LVP---------SILCQFRN  5082
             LVP         S L QFRN
Sbjct  139   LVPRHSEYNPQHSLLAQFRN  158


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2515  WCLIVY  2498
             WC IVY
Sbjct  271   WCSIVY  276


 Score = 18.5 bits (36),  Expect(2) =  3623
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5979  PHMP  5990
             PHMP
Sbjct  164   PHMP  167


 Score = 17.6 bits (34),  Expect(2) =  3623
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5994  YPQTPT  6011
             YP+ PT
Sbjct  203   YPHSPT  208


 Score = 18.5 bits (36),  Expect(2) =  5541
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8772  CSTIQRSVD  8746
             C TI RS D
Sbjct  64    CVTIPRSLD  72


 Score = 16.8 bits (32),  Expect(2) =  5541
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  8877  LS-PGHPS  8857
             LS PG+PS
Sbjct  55    LSCPGQPS  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2393  LKKKK  2407
             LKKKK
Sbjct  41    LKKKK  45


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4637  PHPVYLP  4617
             P P YLP
Sbjct  223   PPPAYLP  229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6637  VQLYY  6623
             V+LYY
Sbjct  334   VHLYY  338


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1051  LLVPFRN  1071
             LL  FRN
Sbjct  152   LLAQFRN  158


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -3

Query  9044  GSPLPSPAQATPP  9006
             GSP   PA  TPP
Sbjct  213   GSPFQMPAD-TPP  224


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 9/20 (45%)
 Frame = -2

Query  5841  IPRSM-----VPH---LHPH  5806
             IPRS+     V H   L PH
Sbjct  67    IPRSLDGRLQVSHRKGL-PH  85


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = +3

Query  7572  NSFAPLLCLGMLVGVINLWNR  7634
             N F    CLG+L  V    NR
Sbjct  307   NRF----CLGLLSNV----NR  319


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4722  SPHPRISS  4745
             SPH  ISS
Sbjct  456   SPHNPISS  463


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7955  CRVPSG  7938
             C +PSG
Sbjct  372   CKIPSG  377


 Score = 15.5 bits (29),  Expect(2) = 44776
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7565  SNPKSPG  7545
             S P SPG
Sbjct  191   SYPNSPG  197


 Score = 15.1 bits (28),  Expect(2) = 44776
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7520  PQPGFLP  7500
             P P +LP
Sbjct  223   PPPAYLP  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2360  PRSLE  2346
             PRSL+
Sbjct  68    PRSLD  72


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 2/18 (11%)
 Frame = +1

Query  3196  INRGSAKNNHRKHSNMGK  3249
             +NR S   N R H   GK
Sbjct  317   VNRNSTIENTRRH--IGK  332


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3984  PSKCV  3970
             PS CV
Sbjct  61    PSNCV  65


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = -2

Query  4062  SCPVSAGITSASIYP  4018
             S P S G  S S YP
Sbjct  191   SYPNSPG-SSSSTYP  204


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4196  FQIPA  4182
             FQ PA
Sbjct  216   FQMPA  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7308  TALFS  7294
             T LFS
Sbjct  4     TSLFS  8


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4066  SIFSF  4080
             S FSF
Sbjct  5     SLFSF  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5278  SHNKN  5292
             S NKN
Sbjct  303   SNNKN  307


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4300  CCLKMF  4283
             C LK F
Sbjct  378   CSLKIF  383


>ref|NP_033665.1|  galectin-9 isoform long [Homo sapiens]
Length=355

 GENE ID: 3965 LGALS9 | lectin, galactoside-binding, soluble, 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +2

Query  8063  LFSY-HRLRDL  8092
             LF Y HRLR+L
Sbjct  326   LFEYYHRLRNL  336


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  1898  EEMSLPGRWKPKM  1936
             EE SLP R   KM
Sbjct  290   EERSLP-R---KM  298


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  2869  EVSGEIEL  2892
             EV G+I+L
Sbjct  343   EVGGDIQL  350


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4494  FAGPFQSGF  4468
             FA  FQ GF
Sbjct  45    FAVNFQTGF  53


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5015  ISTILG  5032
             I TILG
Sbjct  228   ITTILG  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5231  GQHIYETY  5254
             GQH +E Y
Sbjct  323   GQHLFEYY  330


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  7080  LPSVDKLDV  7106
             LP ++ L+V
Sbjct  336   LPTINRLEV  344


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4360  TVPPNPPFS  4334
             TVP  P FS
Sbjct  152   TVPVQPAFS  160


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  1553  PAISGCVPFFATIE  1512
             PA    VPF  TI+
Sbjct  13    PA----VPFSGTIQ  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4637  PHPVY  4623
             PHP Y
Sbjct  219   PHPAY  223


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3894  QLATISF  3874
             QL  ISF
Sbjct  141   QLSYISF  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  738  VQNIQGQM  761
            VQ   GQM
Sbjct  200  VQSAPGQM  207


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3720  IPLCAGTH  3697
             I LC G H
Sbjct  256   INLCSGNH  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  174  SSSGAR  191
            SSSG R
Sbjct  39   SSSGTR  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1080  ILFV  1069
             ILFV
Sbjct  117   ILFV  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2853  VQLSF  2839
             VQLS+
Sbjct  140   VQLSY  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7807  QPICY  7793
             QP+C+
Sbjct  166   QPVCF  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4353  PPIPP  4339
             P IPP
Sbjct  211   PAIPP  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  771  PDVPF  757
            P VPF
Sbjct  13   PAVPF  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3947  PGIW  3958
             PG+W
Sbjct  182   PGVW  185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1893  TVSSAP  1876
             TV SAP
Sbjct  199   TVQSAP  204


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1532  PFFATI  1515
             PF  TI
Sbjct  226   PFITTI  231


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2659  IQIIHV  2642
             IQ  HV
Sbjct  348   IQLTHV  353


>ref|NP_003692.1|  tumor necrosis factor ligand superfamily member 11 isoform 1 
[Homo sapiens]
 sp|O14788.1|TNF11_HUMAN  RecName: Full=Tumor necrosis factor ligand superfamily member 
11; AltName: Full=Receptor activator of nuclear factor kappa-B 
ligand; Short=RANKL; AltName: Full=TNF-related activation-induced 
cytokine; Short=TRANCE; AltName: Full=Osteoprotegerin 
ligand; Short=OPGL; AltName: Full=Osteoclast differentiation 
factor; Short=ODF; AltName: CD_antigen=CD254; Contains: 
RecName: Full=Tumor necrosis factor ligand superfamily member 
11, membrane form; Contains: RecName: Full=Tumor necrosis 
factor ligand superfamily member 11, soluble form
Length=317

 GENE ID: 8600 TNFSF11 | tumor necrosis factor (ligand) superfamily, member 11
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 15/38 (39%)
 Frame = +2

Query  4178  IKQEFGIPYNPQSQGVVESMNKELKKIIG--QVRDQAE  4285
             IKQ F        QG V+   KEL  I+G  ++R  AE
Sbjct  119   IKQAF--------QGAVQ---KELQHIVGSQHIR--AE  143


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3390  SFSNWYHN  3367
             S S WYH+
Sbjct  183   SLSSWYHD  190


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  5824  APSPPPSPQ  5798
             AP PPP P+
Sbjct  32    AP-PPPAPH  39


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6845  LFYYF  6831
             LF+YF
Sbjct  66    LFFYF  70


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -3

Query  4874  CAISLFPPFY  4845
             C + LF  FY
Sbjct  62    CSVALF--FY  69


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6692  GFFFLY  6675
             GF++LY
Sbjct  212   GFYYLY  217


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 0/17 (0%)
 Frame = +2

Query  1946  IGGFIKVRQYDQILIEI  1996
             +GGF K R  ++I IE+
Sbjct  277   VGGFFKLRSGEEISIEV  293


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8269  YYFYNPIC  8246
             YY Y  IC
Sbjct  214   YYLYANIC  221


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3595  ICIRNH  3612
             IC R H
Sbjct  220   ICFRHH  225


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3193  FYIISVG  3173
             FY I VG
Sbjct  272   FYSINVG  278


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6734  KIGNM  6748
             KI NM
Sbjct  195   KISNM  199


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6449  LESQN  6435
             LESQ+
Sbjct  104   LESQD  108


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5808  GGGDGAP  5828
             GGG GAP
Sbjct  19    GGGPGAP  25


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  214  ETRGALSTQ  240
            ET G L T+
Sbjct  226  ETSGDLATE  234


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6409  SHTLL  6423
             SHTL+
Sbjct  252   SHTLM  256


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            NP LL+
Sbjct  295  NPSLLD  300


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8154  YLRAS  8140
             YLR S
Sbjct  11    YLRGS  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8926  PESCIR  8943
             P+SC R
Sbjct  113   PDSCRR  118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2065  VDSDWL  2082
             VD  WL
Sbjct  147   VDGSWL  152


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  243  LGLLKRARQEA  275
            L L KR   EA
Sbjct  152  LDLAKRSKLEA  162


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1948  NSPYHF  1931
             NS +HF
Sbjct  267   NSEFHF  272


>gb|AAP44471.1|  heat shock protein apg-1 [Homo sapiens]
Length=839

 GENE ID: 22824 HSPA4L | heat shock 70kDa protein 4-like [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  2103  ALLRLYQ  2123
             ALLRLYQ
Sbjct  262   ALLRLYQ  268


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -3

Query  1307  LDQQGFCHPIFY  1272
             LD   FC PI Y
Sbjct  778   LDN--FCNPIIY  787


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1649  AFLQGKAREFS  1681
             AF   K REFS
Sbjct  386   AF---KVREFS  393


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1914  QEDGNQK  1934
             QE+G QK
Sbjct  533   QEEGHQK  539


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +2

Query  6203  GRMIM----EK  6223
             G MIM    EK
Sbjct  605   GKMIMQDKLEK  615


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8972  SSMSAVLE  8949
             S +SAVLE
Sbjct  649   SKLSAVLE  656


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2594  FLSCY  2580
             FL CY
Sbjct  10    FLNCY  14


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  2062  ISSNYVDRC  2036
             I   Y DRC
Sbjct  26    IANEYSDRC  34


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -3

Query  3551  KLDKLLVTQSSDL  3513
             KL KL+    SDL
Sbjct  272   KLKKLMSANASDL  284


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4374  ILSPA  4360
             ILSPA
Sbjct  382   ILSPA  386


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6137  TPLCVSL  6157
             TP C+SL
Sbjct  35    TPACISL  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -3

Query  2387  RDVVFLIEL  2361
             R+VVF I++
Sbjct  196   RNVVF-IDM  203


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1193  SYVQNAGRAI  1164
             SY++N G  I
Sbjct  599   SYIENEGKMI  608


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2099  ISPIETV  2119
             IS IE V
Sbjct  335   ISSIEIV  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  4406  KELQKQITK  4432
             KE   QITK
Sbjct  351   KE---QITK  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = +3

Query  6648  KLIVQDPTTIQEKESVSRED  6707
             K+I QD     EKE   R D
Sbjct  606   KMIMQD---KLEKE---RND  619


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 7/21 (33%)
 Frame = +1

Query  1585  ERKDTK*KIV------LRDRL  1629
             ER D K   V       RDRL
Sbjct  616   ERNDAK-NAVEEYVYDFRDRL  635


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8217  LSKLTA  8200
             LSKL A
Sbjct  648   LSKLSA  653


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2863  HTEVSGEIE  2889
             HT  SGE E
Sbjct  829   HTKSSGEME  837


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8071  LPPLE  8085
             LPPL+
Sbjct  188   LPPLD  192


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  873  TPQDLNTMLNTV  908
            TP+DL   L  V
Sbjct  644  TPEDL-SKLSAV  654


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5783  EKYQHL  5800
             E Y HL
Sbjct  724   ERYDHL  729


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  648  LSCLKL  631
            L CL L
Sbjct  165  LNCLRL  170


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +1

Query  4417  KTNYK-----NSKFSGLL  4455
             KT YK     NS    LL
Sbjct  249   KTKYKINVKENSR--ALL  264


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  218  PEELS  232
            PE+LS
Sbjct  645  PEDLS  649


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2931  YVNSLEE  2951
             YV+ L+E
Sbjct  674   YVDKLQE  680


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1567  RAVGN  1581
             RA+GN
Sbjct  46    RAIGN  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6729  IVTN  6718
             IVTN
Sbjct  56    IVTN  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  2754  NIRKNLHSF  2780
             N+R   H F
Sbjct  59    NVRNTIHGF  67


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4319  IHNFK  4333
             IH FK
Sbjct  64    IHGFK  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7115  ITGLLL  7132
             +TG+LL
Sbjct  117   VTGMLL  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1797  KLKDT  1783
             KLK+T
Sbjct  124   KLKET  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1466  DAER  1477
             DAER
Sbjct  150   DAER  153


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6029  VNVTEN  6046
             +NV EN
Sbjct  254   INVKEN  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7158  MSPRSSDL  7181
             MS   SDL
Sbjct  277   MSANASDL  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7293  LCTTLL  7276
             LC  LL
Sbjct  309   LCASLL  314


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  4040  IPAETGQETAYFL  4078
             IPA   Q T +FL
Sbjct  347   IPAVKEQITKFFL  359


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3527  ELQAIY  3544
             EL+A Y
Sbjct  441   ELEAFY  446


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4022  YIEAE  4036
             YIE E
Sbjct  600   YIENE  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5171  LEELK  5185
             L+ELK
Sbjct  678   LQELK  682


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1643  DLAFL  1657
             DL FL
Sbjct  7     DLGFL  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/22 (36%), Positives = 8/22 (36%), Gaps = 13/22 (59%)
 Frame = +2

Query  2483  FTIPSINNETPGIRYQYNVLPQ  2548
             FTI            Q NV PQ
Sbjct  462   FTI------------Q-NVFPQ  470


>emb|CAC85285.1|  anti-peptide/MHC complex HLA-A1/MAGE-A1 monoclonal antibody light 
chain [Homo sapiens]
Length=215


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETTTP  KQ
Sbjct  161   GVETTTPS-KQ  170


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  7     QPPSVS  12


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -1

Query  898  SMVFKSCGVAPSDNAE  851
            SMV      AP D A+
Sbjct  76   SMV------APADEAD  85


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  194   YSCQVTH  200


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3174  APLILAY  3154
             APL L Y
Sbjct  43    APLLLVY  49


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2759  DVFCLVW  2739
             D FC VW
Sbjct  85    DYFCQVW  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  123  PS----SEELQA--NK-ATLVC  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5144  APSVAL  5127
             APSV L
Sbjct  115   APSVTL  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 20/66 (30%), Positives = 23/66 (34%), Gaps = 36/66 (54%)
 Frame = -2

Query  4155  LTV------AP-VKLLPLS-----------VCIVFTGHLPANFKRKY--AV-------SC  4057
             LTV      AP V L P S           VC +       +F   Y  AV       S 
Sbjct  106   LTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI------SDF---YPGAVTVAWKADSS  156

Query  4056  PVSAGI  4039
             PV AG+
Sbjct  157   PVKAGV  162


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 11/25 (44%)
 Frame = +2

Query  7124  LLLTRDGGN-----------SNNES  7165
             LLL  D G+           SN ES
Sbjct  45    LLLVYDDGDRPSGIPDRFSGSNSES  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2517  PGVSLF  2500
             P V LF
Sbjct  116   PSVTLF  121


>sp|P51681.1|CCR5_HUMAN  RecName: Full=C-C chemokine receptor type 5; Short=C-C CKR-5; 
Short=CC-CKR-5; Short=CCR-5; Short=CCR5; AltName: Full=HIV-1 
fusion coreceptor; AltName: Full=CHEMR13; AltName: CD_antigen=CD195
 gb|ABB01004.1|  C-C chemokine receptor type 5 [Homo sapiens]
Length=352

 GENE ID: 1234 CCR5 | chemokine (C-C motif) receptor 5 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 0/13 (0%)
 Frame = -2

Query  447  LPILYVLIYIFSF  409
            LP LY L++IF F
Sbjct  33   LPPLYSLVFIFGF  45


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7670  EINNYTS  7690
             +IN YTS
Sbjct  11    DINYYTS  17


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2839  FWQHY  2825
             FW HY
Sbjct  85    FWAHY  89


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5555  RTVRLI  5572
             R VRLI
Sbjct  232   RAVRLI  237


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6797  KQIASKL  6817
             KQIA  L
Sbjct  26    KQIAARL  32


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1945  SPYHFW  1928
             S Y+FW
Sbjct  185   SQYQFW  190


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7432  IVLLL  7418
             IVLLL
Sbjct  253   IVLLL  257


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3332  EWEFVNT  3352
             +W+F NT
Sbjct  93    QWDFGNT  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2585  CYFGIL  2568
             CY GIL
Sbjct  213   CYSGIL  218


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 10/22 (45%)
 Frame = -3

Query  6851  RLLF-----YY-----FQIVLL  6816
             RL F     Y+     + IVLL
Sbjct  235   RLIFTIMIVYFLFWAPYNIVLL  256


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4150  RSTGE  4136
             RSTGE
Sbjct  341   RSTGE  345


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  281  APRLLP  264
            A RLLP
Sbjct  29   AARLLP  34


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  960  AAEWD  974
            AA+WD
Sbjct  91   AAQWD  95


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  7876  FYSE*S*AGIFTII  7917
             F+S     GIF II
Sbjct  112   FFS-----GIFFII  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  303  FGVLTS  286
            FGV TS
Sbjct  144  FGVVTS  149


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2253  SGPIFEI  2233
             S PI++I
Sbjct  6     SSPIYDI  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7487  IKQLQARIL  7513
             +KQ  AR L
Sbjct  25    VKQIAARLL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6358  TTCQLIAG  6335
             T CQL  G
Sbjct  99    TMCQLLTG  106


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  2496  LGMVNAVYFLK  2464
             L  V AV+ LK
Sbjct  128   LAVVHAVFALK  138


 Score = 15.9 bits (30),  Expect(2) = 42213
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8208  LTALFF  8191
             LT L+F
Sbjct  104   LTGLYF  109


 Score = 15.1 bits (28),  Expect(2) = 42213
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8112  ILVTI  8098
             IL TI
Sbjct  120   ILLTI  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6523  NSMCTL  6506
             N MC L
Sbjct  98    NTMCQL  103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3209  LPLLI  3195
             LPLL+
Sbjct  205   LPLLV  209


 Score = 15.5 bits (29),  Expect(2) = 50335
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8483  YSSYQ  8497
             YS YQ
Sbjct  184   YSQYQ  188


 Score = 15.1 bits (28),  Expect(2) = 50335
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8367  SVIGW  8381
             SVI W
Sbjct  149   SVITW  153


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             L+L IS
Sbjct  70    LNLAIS  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2459  EDFRKY  2476
             E FR Y
Sbjct  302   EKFRNY  307


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4415  QKQITK  4432
             QK+I K
Sbjct  313   QKHIAK  318


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2305  FSTVFF  2288
             FS +FF
Sbjct  113   FSGIFF  118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -3

Query  5291  FLLWLP----LL  5268
             FL W P    LL
Sbjct  245   FLFWAPYNIVLL  256


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8441  CCSHPI  8424
             CC  PI
Sbjct  290   CCINPI  295


>ref|NP_143026.1|  tumor necrosis factor ligand superfamily member 11 isoform 2 
[Homo sapiens]
Length=244

 GENE ID: 8600 TNFSF11 | tumor necrosis factor (ligand) superfamily, member 11
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 15/38 (39%)
 Frame = +2

Query  4178  IKQEFGIPYNPQSQGVVESMNKELKKIIG--QVRDQAE  4285
             IKQ F        QG V+   KEL  I+G  ++R  AE
Sbjct  46    IKQAF--------QGAVQ---KELQHIVGSQHIR--AE  70


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3390  SFSNWYHN  3367
             S S WYH+
Sbjct  110   SLSSWYHD  117


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6692  GFFFLY  6675
             GF++LY
Sbjct  139   GFYYLY  144


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 0/17 (0%)
 Frame = +2

Query  1946  IGGFIKVRQYDQILIEI  1996
             +GGF K R  ++I IE+
Sbjct  204   VGGFFKLRSGEEISIEV  220


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8269  YYFYNPIC  8246
             YY Y  IC
Sbjct  141   YYLYANIC  148


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3595  ICIRNH  3612
             IC R H
Sbjct  147   ICFRHH  152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3193  FYIISVG  3173
             FY I VG
Sbjct  199   FYSINVG  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6734  KIGNM  6748
             KI NM
Sbjct  122   KISNM  126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6449  LESQN  6435
             LESQ+
Sbjct  31    LESQD  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  214  ETRGALSTQ  240
            ET G L T+
Sbjct  153  ETSGDLATE  161


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6409  SHTLL  6423
             SHTL+
Sbjct  179   SHTLM  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            NP LL+
Sbjct  222  NPSLLD  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8926  PESCIR  8943
             P+SC R
Sbjct  40    PDSCRR  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2065  VDSDWL  2082
             VD  WL
Sbjct  74    VDGSWL  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  243  LGLLKRARQEA  275
            L L KR   EA
Sbjct  79   LDLAKRSKLEA  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1948  NSPYHF  1931
             NS +HF
Sbjct  194   NSEFHF  199


>ref|NP_001120645.1|  cell adhesion molecule 3 isoform 2 [Homo sapiens]
Length=398

 GENE ID: 57863 CADM3 | cell adhesion molecule 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
 Frame = -2

Query  7917  DNGEYPCLTLFTIE-STAK---TIL-KPTKPPTII  7828
             D GEY C   FT    TAK   T+L  P KP  II
Sbjct  104   DEGEYTC-SIFTMPVRTAKSLVTVLGIPQKP--II  135


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  870  LLLIML  853
            LLLIML
Sbjct  343  LLLIML  348


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = +1

Query  8692  HKATSLISRTTHQGQGSD  8745
             HK T L    TH+  GSD
Sbjct  358   HKGTYL----THEAKGSD  371


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 13/30 (43%)
 Frame = +3

Query  6663  DPTTIQEKES-------------VSREDQG  6713
             +PT IQE                V RED G
Sbjct  175   EPTRIQEDPNGKTFTVSSSVTFQVTREDDG  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  3095  APASVFLLLSLL  3060
             APA   LLL LL
Sbjct  3     APAASLLLLLLL  14


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  4632  MRIRTWKSLV  4661
             M +RT KSLV
Sbjct  115   MPVRTAKSLV  124


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2411  LIFSFL  2394
             LIF FL
Sbjct  284   LIFPFL  289


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1937  IGGIGGFI  1960
             IGGI  FI
Sbjct  333   IGGIVAFI  340


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  7832  IVGGLVGLRIVF  7867
             I+GG V   IVF
Sbjct  332   IIGGIVAF-IVF  342


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7391  PVPSAS  7374
             PVPS S
Sbjct  321   PVPSSS  326


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4627  STCHTII  4607
             ST H II
Sbjct  327   STYHAII  333


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7254  PNGSIFT  7234
             PNG  FT
Sbjct  183   PNGKTFT  189


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/22 (36%), Positives = 8/22 (36%), Gaps = 10/22 (45%)
 Frame = -2

Query  8706  GSSLVCG----------RSTDQ  8671
             G S VC           RST Q
Sbjct  204   GASIVCSVNHESLKGADRSTSQ  225


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4296  QQYKWQ  4313
             QQY W+
Sbjct  263   QQYLWE  268


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4578  MIFAFL  4561
             +IF FL
Sbjct  284   LIFPFL  289


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7906  FTIIVSDPPP  7935
             +T  V DP P
Sbjct  312   YTLNVNDPSP  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  4043  PAETGQETAYF  4075
             PA   Q+T YF
Sbjct  65    PA---QQTLYF  72


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4499  LWKGEGAV  4522
             LW  EG V
Sbjct  266   LWEKEGSV  273


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4962  LIRPFL  4945
             LI PFL
Sbjct  284   LIFPFL  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PSP PS
Sbjct  319   PSPVPS  324


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  559  LDHYII  576
            L HY I
Sbjct  351  LGHYLI  356


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2417  LLLIF  2403
             LLL F
Sbjct  11    LLLLF  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2077  NLSQ  2066
             NLSQ
Sbjct  25    NLSQ  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4302  TAVLRC  4285
             T VL C
Sbjct  45    TVVLKC  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3210  TASVNC  3193
             TA  NC
Sbjct  147   TATLNC  152


>ref|NP_002299.2|  galectin-9 isoform short [Homo sapiens]
Length=323

 GENE ID: 3965 LGALS9 | lectin, galactoside-binding, soluble, 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +2

Query  8063  LFSY-HRLRDL  8092
             LF Y HRLR+L
Sbjct  294   LFEYYHRLRNL  304


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  1898  EEMSLPGRWKPKM  1936
             EE SLP R   KM
Sbjct  258   EERSLP-R---KM  266


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  2869  EVSGEIEL  2892
             EV G+I+L
Sbjct  311   EVGGDIQL  318


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4494  FAGPFQSGF  4468
             FA  FQ GF
Sbjct  45    FAVNFQTGF  53


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5015  ISTILG  5032
             I TILG
Sbjct  196   ITTILG  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5231  GQHIYETY  5254
             GQH +E Y
Sbjct  291   GQHLFEYY  298


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  7080  LPSVDKLDV  7106
             LP ++ L+V
Sbjct  304   LPTINRLEV  312


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  1553  PAISGCVPFFATIE  1512
             PA    VPF  TI+
Sbjct  13    PA----VPFSGTIQ  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4637  PHPVY  4623
             PHP Y
Sbjct  187   PHPAY  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3894  QLATISF  3874
             QL  ISF
Sbjct  141   QLSYISF  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  738  VQNIQGQM  761
            VQ   GQM
Sbjct  168  VQSAPGQM  175


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3720  IPLCAGTH  3697
             I LC G H
Sbjct  224   INLCSGNH  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  174  SSSGAR  191
            SSSG R
Sbjct  39   SSSGTR  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1080  ILFV  1069
             ILFV
Sbjct  117   ILFV  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2853  VQLSF  2839
             VQLS+
Sbjct  140   VQLSY  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4353  PPIPP  4339
             P IPP
Sbjct  179   PAIPP  183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  771  PDVPF  757
            P VPF
Sbjct  13   PAVPF  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3947  PGIW  3958
             PG+W
Sbjct  150   PGVW  153


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1893  TVSSAP  1876
             TV SAP
Sbjct  167   TVQSAP  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1532  PFFATI  1515
             PF  TI
Sbjct  194   PFITTI  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2659  IQIIHV  2642
             IQ  HV
Sbjct  316   IQLTHV  321


>sp|O75326.1|SEM7A_HUMAN  RecName: Full=Semaphorin-7A; AltName: Full=Semaphorin-L; Short=Sema 
L; AltName: Full=Semaphorin-K1; Short=Sema K1; AltName: 
Full=John-Milton-Hargen human blood group Ag; AltName: Full=JMH 
blood group antigen; AltName: Full=CDw108; AltName: CD_antigen=CD108; 
Flags: Precursor
Length=666

 GENE ID: 8482 SEMA7A | semaphorin 7A, GPI membrane anchor (John Milton Hagen
blood group) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  929  HGCLMS--PHC  903
            HGCLMS  P C
Sbjct  501  HGCLMSRDPYC  511


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
 Frame = +2

Query  5819  WGTMLLGMLMICS--ATEK  5869
             W T L  ML +CS  AT K
Sbjct  281   WNTFLKAML-VCSDAATNK  298


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = -3

Query  6482  VLFH*TSYYYILESQNQPGHNNVW  6411
             VLFH            +PG   VW
Sbjct  77    VLFH------------EPGSSSVW  88


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 3/19 (15%)
 Frame = -1

Query  9046  RARHSPVPPRPRLPGKSPA  8990
             RA   P  PR R PG  PA
Sbjct  8     RA--APSAPRARVPG-PPA  23


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/25 (40%), Positives = 10/25 (40%), Gaps = 10/25 (40%)
 Frame = +1

Query  2266  YSSICHKEKRQY*ME---KISRFQR  2331
             YS I      Q   E   KI RF R
Sbjct  188   YSTI----RKQ---EYNGKIPRFRR  205


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8537  LLLLL  8523
             LLLLL
Sbjct  33    LLLLL  37


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2606  FRKQNPD  2626
             FR  NPD
Sbjct  244   FREDNPD  250


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 13/29 (44%)
 Frame = -3

Query  5321  ENG*TAVVAEFLL----------WLPLLP  5265
             E+G   + AE LL          WL  LP
Sbjct  632   EDG---IMAEHLLGHACALAASLWLGVLP  657


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6862  LRRGPR  6879
             LR GPR
Sbjct  48    LRSGPR  53


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  426  IYIFSFP  406
            +Y F FP
Sbjct  95   VYLFDFP  101


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1043  YVTSPW  1026
             YV S W
Sbjct  478   YVSSQW  483


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8078  RLRDLLL  8098
             RLR LLL
Sbjct  30    RLRLLLL  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1678  FFRAD  1692
             FFR D
Sbjct  243   FFRED  247


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 1/14 (7%)
 Frame = -3

Query  155  KGSEGSL-VTRVTQ  117
            K  E  L V RV Q
Sbjct  251  KNPEAPLNVSRVAQ  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  6410  ELAQRI----PL  6387
             E AQR+    PL
Sbjct  386   EVAQRVEPMGPL  397


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 15/32 (46%)
 Frame = +2

Query  3407  ETFYVDGAANRETKLGKAGYV-TNRG-RQKVV  3496
             ETF V         L    Y  T+RG  +KVV
Sbjct  422   ETFHV---------L----YLTTDRGTIHKVV  440


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3809  HEKYH  3823
             H KYH
Sbjct  403   HSKYH  407


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             LPL L L L
Sbjct  27    LPLRLRLLL  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5181  LRMKLL  5198
             LR+ LL
Sbjct  29    LRLRLL  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3193  TINRGSAK  3216
             T+N GS K
Sbjct  110   TVNIGSTK  117


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6458  NKTFN  6472
             NK FN
Sbjct  297   NKNFN  301


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4781  YQSSIP  4764
             Y+SS P
Sbjct  354   YHSSLP  359


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4513  FTFPE  4499
             F FPE
Sbjct  98    FDFPE  102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  848  VFSIIR  865
            V+S IR
Sbjct  187  VYSTIR  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7925  SETIMVN  7905
             S+T+M N
Sbjct  215   SDTVMQN  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5093  QFRNTR  5076
             Q R+TR
Sbjct  315   QWRDTR  320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7527  YLSTAR  7510
             YL T R
Sbjct  428   YLTTDR  433


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4058  QETAYF  4075
             QE  YF
Sbjct  616   QEGSYF  621


>pdb|1J89|A  Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 2
 pdb|1J89|B  Chain B, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 2
 pdb|1J89|C  Chain C, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 2
 7 more sequence titles
 pdb|1J89|D  Chain D, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 2
 pdb|1J89|E  Chain E, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 2
 pdb|1J88|A  Chain A, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 1
 pdb|1J88|B  Chain B, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 1
 pdb|1J88|C  Chain C, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 1
 pdb|1J88|D  Chain D, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 1
 pdb|1J88|E  Chain E, Human High Affinity Fc Receptor Fc(Epsilon)ri(Alpha), 
Tetragonal Crystal Form 1
Length=172


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +2

Query  8126  GRRGW-----------EALKYW  8158
             G R W           EALKYW
Sbjct  109   GWRNWDVYKVIYYKDGEALKYW  130


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6487  YKCQH  6501
             YKCQH
Sbjct  66    YKCQH  70


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6554  NGSLAEE  6574
             NGSL EE
Sbjct  42    NGSLSEE  48


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8759  WMVLQAS  8779
             W+ LQAS
Sbjct  87    WLLLQAS  93


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 13/26 (50%)
 Frame = +1

Query  2035  YTCQHNWKKSVD----------SDWL  2082
             Y CQH     V+          SDWL
Sbjct  66    YKCQH---QQVNESEPVYLEVFSDWL  88


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4713  DVYKTI  4696
             DVYK I
Sbjct  114   DVYKVI  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7917  DNGEYPC  7897
             D GEY C
Sbjct  62    DSGEYKC  68


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -2

Query  3378  WYHNFTKGGVL---TNS  3337
             W+HN    G L   TNS
Sbjct  39    WFHN----GSLSEETNS  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4614  VWQVD  4628
             VWQ D
Sbjct  155   VWQLD  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3427  PIYIEGF  3407
             P+Y E F
Sbjct  78    PVYLEVF  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3759  ESGKYY  3776
             +SG YY
Sbjct  145   DSGTYY  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             V LTC
Sbjct  22    VTLTC  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1663  EGQGIFFR  1686
             EGQ  F R
Sbjct  99    EGQPLFLR  106


>ref|NP_734464.1|  interleukin-28 receptor subunit alpha isoform 1 [Homo sapiens]
Length=520

 GENE ID: 163702 IL28RA | interleukin 28 receptor, alpha (interferon, lambda
receptor) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 8/23 (34%)
 Frame = -3

Query  3233  CFL-------WLFFALP-LLIVL  3189
             CFL       W F  LP LLI L
Sbjct  217   CFLLEVPEANWAFLVLPSLLILL  239


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +3

Query  8544  FPVTP-----QVPLRP  8576
             FPVTP     Q+ L P
Sbjct  173   FPVTPHGQPVQITLQP  188


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3686  VYLAWVP  3706
             VYL W P
Sbjct  39    VYLTWLP  45


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  2363  LPRSLEFS  2340
             +PR L+FS
Sbjct  263   MPRALDFS  270


 Score = 18.5 bits (36),  Expect(2) =  2813
 Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 16/37 (43%)
 Frame = -2

Query  8880  LL--SPGHPSHAGSQGVTSWCSLLYWPLLS-----YL  8791
             LL   PG P  A  Q VT         LLS     YL
Sbjct  14    LLQAAPGRPRLAPPQNVT---------LLSQNFSVYL  41


 Score = 18.0 bits (35),  Expect(2) =  2813
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8801  YLIWL  8787
             YL WL
Sbjct  40    YLTWL  44


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = -3

Query  230  RAPLVSLSLSGPCSGATARD  171
            RAPLV      P  G  A D
Sbjct  371  RAPLV------PSEGSSAWD  384


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4436  QNFRVY  4453
             QNF VY
Sbjct  35    QNFSVY  40


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5816  RWGTMLL  5836
             RWG +LL
Sbjct  6     RWGPLLL  12


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  3335  TQESRW---LA  3312
             TQ+ RW   LA
Sbjct  313   TQQTRWKKDLA  323


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1703  SPTRR  1717
             SPTRR
Sbjct  62    SPTRR  66


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 2/16 (12%)
 Frame = +2

Query  5888  YGVPVWKEAT--TTLF  5929
             Y V  WKE     TLF
Sbjct  158   YEVAFWKEGAGNKTLF  173


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = +2

Query  5216  WLHGLG--QHIYETY  5254
             WL GLG  Q +  TY
Sbjct  43    WLPGLGNPQDV--TY  55


 Score = 17.2 bits (33),  Expect(2) = 11832
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6852  LSNPQEGT  6875
             L NPQ+ T
Sbjct  47    LGNPQDVT  54


 Score = 16.3 bits (31),  Expect(2) = 11832
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6762  VTLVEQN  6782
             VTL  QN
Sbjct  30    VTLLSQN  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3245  PILLCFL  3225
             P LLC L
Sbjct  9     PLLLCLL  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 21/42 (50%)
 Frame = -2

Query  426  IYIFS------------FPLALTE----FFPIDLILPR-LIL  352
            IY FS            F L   E    F    L+LP  LIL
Sbjct  201  IYTFSVPKYSKFSKPTCFLLEVPEANWAF----LVLPSLLIL  238


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7489  QAAPG  7503
             QAAPG
Sbjct  16    QAAPG  20


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5081  TRQRW  5067
             TR RW
Sbjct  64    TRRRW  68


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             +EEEE
Sbjct  481   EEEEE  485


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3177  WAPLIL  3160
             W PL L
Sbjct  7     WGPLLL  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  459  LAPCLP  442
            L PC+P
Sbjct  147  LPPCMP  152


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  2053  WKKSVDSDW  2079
             W   VDS W
Sbjct  390   WASTVDSSW  398


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  7008  QSPSHAE  7028
             Q P H E
Sbjct  355   QAPGHSE  361


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  641  QDRGR  655
            +DRGR
Sbjct  508  EDRGR  512


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  256  FSKP  245
            FSKP
Sbjct  212  FSKP  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             LP +L+L L
Sbjct  232   LPSLLILLL  240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  3716  LCVLVPMPDRP  3684
             LC L   P RP
Sbjct  12    LCLLQAAPGRP  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1539  LCALLC  1522
             LC ++C
Sbjct  81    LCSMMC  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3276  CMGSLNL  3256
             CM  L+L
Sbjct  150   CMPPLDL  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7882  YRKYSK  7865
             Y K+SK
Sbjct  209   YSKFSK  214


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2375  FLIELP  2358
             FL E P
Sbjct  218   FLLEVP  223


>ref|NP_067012.1|  cell adhesion molecule 3 isoform 1 [Homo sapiens]
Length=432

 GENE ID: 57863 CADM3 | cell adhesion molecule 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
 Frame = -2

Query  7917  DNGEYPCLTLFTIE-STAK---TIL-KPTKPPTII  7828
             D GEY C   FT    TAK   T+L  P KP  II
Sbjct  138   DEGEYTC-SIFTMPVRTAKSLVTVLGIPQKP--II  169


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  870  LLLIML  853
            LLLIML
Sbjct  377  LLLIML  382


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = +1

Query  8692  HKATSLISRTTHQGQGSD  8745
             HK T L    TH+  GSD
Sbjct  392   HKGTYL----THEAKGSD  405


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 13/30 (43%)
 Frame = +3

Query  6663  DPTTIQEKES-------------VSREDQG  6713
             +PT IQE                V RED G
Sbjct  209   EPTRIQEDPNGKTFTVSSSVTFQVTREDDG  238


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  3095  APASVFLLLSLL  3060
             APA   LLL LL
Sbjct  3     APAASLLLLLLL  14


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  4632  MRIRTWKSLV  4661
             M +RT KSLV
Sbjct  149   MPVRTAKSLV  158


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2411  LIFSFL  2394
             LIF FL
Sbjct  318   LIFPFL  323


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1937  IGGIGGFI  1960
             IGGI  FI
Sbjct  367   IGGIVAFI  374


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  7832  IVGGLVGLRIVF  7867
             I+GG V   IVF
Sbjct  366   IIGGIVAF-IVF  376


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7391  PVPSAS  7374
             PVPS S
Sbjct  355   PVPSSS  360


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  1905  ISSNTVSSAP  1876
             ISS TV S P
Sbjct  49    ISS-TVWSSP  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4627  STCHTII  4607
             ST H II
Sbjct  361   STYHAII  367


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7254  PNGSIFT  7234
             PNG  FT
Sbjct  217   PNGKTFT  223


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/22 (36%), Positives = 8/22 (36%), Gaps = 10/22 (45%)
 Frame = -2

Query  8706  GSSLVCG----------RSTDQ  8671
             G S VC           RST Q
Sbjct  238   GASIVCSVNHESLKGADRSTSQ  259


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4296  QQYKWQ  4313
             QQY W+
Sbjct  297   QQYLWE  302


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4578  MIFAFL  4561
             +IF FL
Sbjct  318   LIFPFL  323


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7906  FTIIVSDPPP  7935
             +T  V DP P
Sbjct  346   YTLNVNDPSP  355


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2450  PLDE  2461
             PLDE
Sbjct  44    PLDE  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  4043  PAETGQETAYF  4075
             PA   Q+T YF
Sbjct  99    PA---QQTLYF  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  20  DLSLGAL  40
           DL LG L
Sbjct  36  DLELGTL  42


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9105  DLSLGAL  9125
             DL LG L
Sbjct  36    DLELGTL  42


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4499  LWKGEGAV  4522
             LW  EG V
Sbjct  300   LWEKEGSV  307


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4962  LIRPFL  4945
             LI PFL
Sbjct  318   LIFPFL  323


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PSP PS
Sbjct  353   PSPVPS  358


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  559  LDHYII  576
            L HY I
Sbjct  385  LGHYLI  390


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2417  LLLIF  2403
             LLL F
Sbjct  11    LLLLF  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2077  NLSQ  2066
             NLSQ
Sbjct  25    NLSQ  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4302  TAVLRC  4285
             T VL C
Sbjct  79    TVVLKC  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3210  TASVNC  3193
             TA  NC
Sbjct  181   TATLNC  186


>ref|NP_057529.1|  pleckstrin-2 [Homo sapiens]
Length=353

 GENE ID: 26499 PLEK2 | pleckstrin 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +2

Query  3026  KEPV--HGVYYDPSKD  3067
             K+P   H  YYDPSK+
Sbjct  273   KDPAFLH--YYDPSKE  286


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  867  LLIMLKT  847
            LLI LKT
Sbjct  70   LLIKLKT  76


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6223  FLHYHSP  6203
             FLHY  P
Sbjct  277   FLHYYDP  283


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8458  NMEQ  8469
             NMEQ
Sbjct  148   NMEQ  151


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -3

Query  1634  KIS----LSLSTI  1608
             KIS     SLST+
Sbjct  230   KISPKEEISLSTV  242


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1125  RWIIL  1139
             RW IL
Sbjct  24    RWFIL  28


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7167  RSSDLEEE  7190
             RS DL E+
Sbjct  205   RSGDLAEQ  212


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5302  TAVYPFSE  5325
             TA Y F E
Sbjct  218   TALYTFAE  225


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 8/20 (40%)
 Frame = -1

Query  1447  VTWLI-----AS---AKTLA  1412
             V WLI     AS   A TLA
Sbjct  165   VDWLISNSFTASRLEAVTLA  184


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 14/35 (40%)
 Frame = +2

Query  2837  EKDSWT---VNDIQKLVGKLNWASQIYPGIKVRQL  2932
             E D W       I+        A Q  PG KV QL
Sbjct  91    ERDAWAFEITGAIH--------AGQ--PG-KVQQL  114


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  882  LVGWL  868
            LV WL
Sbjct  164  LVDWL  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2762  KEPPFL  2779
             K+P FL
Sbjct  273   KDPAFL  278


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  322  LEGERWV  342
            LEG R V
Sbjct  38   LEGGRRV  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8018  SLIEW  8004
             SL++W
Sbjct  163   SLVDW  167


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5731  LIDRLI  5748
             L+D LI
Sbjct  164   LVDWLI  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  356  IKRGRI  373
            +KRG I
Sbjct  12   VKRGHI  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6458  YYILE  6444
             YY LE
Sbjct  35    YYKLE  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5567  LIKLLYQSS  5593
             LIKL  Q S
Sbjct  71    LIKLKTQTS  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  703  DTAIRS  720
            +T IRS
Sbjct  140  NTGIRS  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8342  LIAKSF  8325
             LI  SF
Sbjct  168   LISNSF  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5200  SNSF  5189
             SNSF
Sbjct  170   SNSF  173


>ref|NP_783161.1|  GTPase IMAP family member 8 [Homo sapiens]
 sp|Q8ND71.2|GIMA8_HUMAN  RecName: Full=GTPase IMAP family member 8; AltName: Full=Immune-associated 
nucleotide-binding protein 9; Short=IAN-9; AltName: 
Full=Protein IanT
 gb|EAL24479.1|  human immune associated nucleotide 6 [Homo sapiens]
 emb|CAD39025.2|  hypothetical protein [Homo sapiens]
Length=665

 GENE ID: 155038 GIMAP8 | GTPase, IMAP family member 8 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.7 bits (53),  Expect =    70
 Identities = 6/8 (75%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = -1

Query  1993  FYEYLIIL  1970
             F+EY+IIL
Sbjct  355   FFEYMIIL  362


 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  6014  QEVVLVNVTENFNMWKNDMVEQM  6082
             QEVV V+ T  FN        QM
Sbjct  487   QEVVVVD-TPSFN--------QM  500


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5719  FFVLIF  5702
             FFVL+F
Sbjct  527   FFVLVF  532


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 8/26 (30%)
 Frame = +3

Query  3678  RKRSIWHGYQHT--------KELEEM  3731
             RK S W GY HT        K  +EM
Sbjct  625   RKESGWSGYPHTQENVSKLIKNVQEM  650


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 14/31 (45%)
 Frame = +3

Query  7134  QEMVVIAT-----M------SPRSSDLEEEI  7193
             QE VV+ T     M        R   LEEE+
Sbjct  487   QEVVVVDTPSFNQMLDVEKDPSR---LEEEV  514


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4554  CQEEKQR  4574
             C E+KQR
Sbjct  75    CAEDKQR  81


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  5704  ILRQRK---ID  5727
             +LR+RK   ID
Sbjct  55    VLRERKVVVID  65


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 18/43 (41%)
 Frame = +3

Query  4851  WRKKRYSTQVD-PELADQL--IHLYYFDCFSDSAIRKALLGHI  4970
             WRKK  S  +D P+    L  I         DS +RK    HI
Sbjct  293   WRKKKVSI-IDAPDISS-LKNI---------DSEVRK----HI  320


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1747  VVVSTPD  1727
             VV+ TPD
Sbjct  62    VVIDTPD  68


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8957  VLEVLR  8940
             VLE LR
Sbjct  182   VLELLR  187


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  759  MVHQ  770
            MVHQ
Sbjct  422  MVHQ  425


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4784  NNILGS  4801
             N ILGS
Sbjct  456   NSILGS  461


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8644  FTPKED  8661
             FT KED
Sbjct  564   FTRKED  569


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/16 (37%), Positives = 8/16 (50%), Gaps = 8/16 (50%)
 Frame = -1

Query  2539  HIVLISNPWCLIVYTR  2492
             HI+        IV+TR
Sbjct  128   HII--------IVFTR  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +2

Query  5435  LLVPIAI  5455
             LLV IAI
Sbjct  98    LLV-IAI  103


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 15/45 (33%), Positives = 16/45 (35%), Gaps = 25/45 (55%)
 Frame = -1

Query  1357  AAGPN------AFKIVLQSGFA-------F------W-TNKVSVI  1283
             AAG N      AF    Q GF        F      W   KVS+I
Sbjct  262   AAG-NSILGRQAF----QTGFSEQSVTQSFLSESRSWRKKKVSII  301


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7180  RSEDLG  7163
             R EDLG
Sbjct  365   RKEDLG  370


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7180  RSEDLG  7163
             R EDLG
Sbjct  566   RKEDLG  571


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4482  FQSGF  4468
             FQ GF
Sbjct  273   FQTGF  277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +3

Query  3477  EEDK----KL  3494
             EEDK    KL
Sbjct  539   EEDKTAVAKL  548


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -1

Query  391  IFSHRSNS  368
            IF    NS
Sbjct  167  IFNNKTNS  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7383  VSVIEA  7366
             VS+I+A
Sbjct  298   VSIIDA  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4994  LIFTPR  4977
             L+FT R
Sbjct  462   LVFTSR  467


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8126  GRRGWE  8143
             GRR W+
Sbjct  480   GRRTWD  485


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2693  TKIEELR  2713
             TK+ +LR
Sbjct  619   TKVNDLR  625


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  6384  QACVMTE  6364
             Q C M E
Sbjct  4     QSCQMSE  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4857  KKRYS  4871
             K RYS
Sbjct  393   KNRYS  397


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5493  NKSLR  5507
             NK LR
Sbjct  584   NKALR  588


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  892  VFKSCG  875
            +FK CG
Sbjct  590  IFKKCG  595


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1982  SDHTV  1968
             SD+TV
Sbjct  41    SDQTV  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8644  FTPKED  8661
             FT K+D
Sbjct  133   FTRKDD  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2656  QIIHVL  2639
             QI +VL
Sbjct  178   QITQVL  183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  187  PEQGP  201
            PEQ P
Sbjct  239  PEQNP  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1351  GPNAF  1337
             GP AF
Sbjct  323   GPHAF  327


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  2472  FLKSSSK  2452
             FL  S K
Sbjct  377   FLRNSNK  383


>pdb|2VXQ|L  Chain L, Crystal Structure Of The Major Grass Pollen Allergen 
Phl P 2 In Complex With Its Specific Ige-Fab
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect(2) =    72
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 9/34 (26%)
 Frame = +2

Query  7004  DTITLPCRIKQIINM---W--QKVGKA----MYA  7078
             D +T  CR  Q IN    W  +K GKA     YA
Sbjct  17    DRVTISCRASQRINTYLNWYQHKPGKAPKLLIYA  50


 Score = 21.0 bits (42),  Expect(2) =    72
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             E TQSPS
Sbjct  3     EMTQSPS  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3415  EGFCSYY  3395
             E F SYY
Sbjct  81    EDFASYY  87


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>gb|AAN40505.1|  melanoma-associated antigen [Homo sapiens]
Length=453

 GENE ID: 375248 ANKRD36 | ankyrin repeat domain 36 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.8 bits (44),  Expect(2) =    83
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  3468  LLIEEDKKL  3494
             LL EED K+
Sbjct  358   LLLEEDNKM  366


 Score = 21.0 bits (42),  Expect(2) =    83
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3456  KQDMLL  3473
             KQ+MLL
Sbjct  312   KQNMLL  317


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 4/13 (30%)
 Frame = -2

Query  7626  RDLLLQ-LAFQGT  7591
             RD   Q LAFQGT
Sbjct  210   RD---QELAFQGT  219


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -1

Query  7477  CEL--QQMLLRLNSPQQ  7433
             C+L  Q MLL     QQ
Sbjct  308   CQLKKQNMLL-----QQ  319


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  699  TG--HSNQVSQ  725
            TG   SNQVS+
Sbjct  77   TGGNNSNQVSE  87


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3120  IKSHLK  3137
             IKS+LK
Sbjct  4     IKSQLK  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  6206  RMIMEKGEIKN  6238
             R+ +EK  IKN
Sbjct  107   RLRLEKDTIKN  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  3465  MLLIEEDKKL  3494
             +LL E++K L
Sbjct  358   LLLEEDNKML  367


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5284  NKNSATTA  5307
             NK SAT A
Sbjct  404   NKGSATKA  411


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2047  VDRCR  2033
             VD CR
Sbjct  220   VDKCR  224


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8907  LAFHHVAREL  8936
             L F HV  EL
Sbjct  267   LVFEHVQSEL  276


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  6484  MYKCQHSTM  6510
             MYK    TM
Sbjct  289   MYKSGYNTM  297


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8652  QRRQDILD  8675
             Q R D+L+
Sbjct  397   QKRDDVLN  404


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7668  EKLTITQ  7688
             EKL IT+
Sbjct  45    EKLRITE  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3453  EKQDML  3470
             EK+D+L
Sbjct  90    EKEDLL  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7142  GGNSNNESE  7168
             G NSN  SE
Sbjct  79    GNNSNQVSE  87


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8820  ENTSL  8834
             ENT L
Sbjct  166   ENTTL  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  3962  LD-----CTHLE  3982
             LD     CT LE
Sbjct  413   LDASSRHCTYLE  424


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3838  CSPITV  3821
             C P TV
Sbjct  446   CTPTTV  451


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2875  SGEIEL  2892
             S E+EL
Sbjct  70    SAEVEL  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8579  DLQGSCR  8599
             +LQ  CR
Sbjct  348   NLQAECR  354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6681  EKESVSRE  6704
             EKE   RE
Sbjct  382   EKEKAERE  389


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8473  QVAIQQL  8493
             +VA+ QL
Sbjct  389   EVAVRQL  395


>pdb|2X44|D  Chain D, Structure Of A Strand-Swapped Dimeric Form Of Ctla-4
Length=131


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 10/34 (29%)
 Frame = +3

Query  1401  PGHKA---RV--LAEAMSQVTN--SATIMMQRGN  1481
             PG KA   RV  L +A SQVT    AT MM  GN
Sbjct  29    PG-KATEVRVTVLRQADSQVTEVCAATYMM--GN  59


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4272  EIRLNILRQ  4298
             E+R  +LRQ
Sbjct  34    EVRVTVLRQ  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7070  MYAPP  7084
             MY PP
Sbjct  100   MYPPP  104


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  2866  YVID---SP  2849
             YVID   SP
Sbjct  116   YVIDPEPSP  124


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7333  VLGSSR  7350
             VL SSR
Sbjct  12    VLASSR  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  431  TYSMG  445
            TY MG
Sbjct  54   TYMMG  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  187  PEQGPESE  210
            PE  P+S+
Sbjct  120  PEPSPDSD  127


>pdb|3LGD|A  Chain A, Crystal Structure Of Human Adenosine Deaminase Growth 
Factor Adenosine Deaminase Type 2 (Ada2)
 pdb|3LGD|B  Chain B, Crystal Structure Of Human Adenosine Deaminase Growth 
Factor Adenosine Deaminase Type 2 (Ada2)
 pdb|3LGG|A  Chain A, Crystal Structure Of Human Adenosine Deaminase Growth 
Factor Adenosine Deaminase Type 2 (Ada2) Complexed With Transition 
Analogue, Coformycin
 pdb|3LGG|B  Chain B, Crystal Structure Of Human Adenosine Deaminase Growth 
Factor Adenosine Deaminase Type 2 (Ada2) Complexed With Transition 
Analogue, Coformycin
Length=508


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +3

Query  4803  HTGERDWHLGQGVSIE  4850
             H GE DW   QG SI+
Sbjct  330   HAGETDW---QGTSID  342


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = -2

Query  5853  QIINIPRSMVP-----HLH  5812
             Q+ NI R M P     HLH
Sbjct  71    QVFNILR-MMPKGAALHLH  88


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5473  HCQVCF  5490
             HC++CF
Sbjct  107   HCHICF  112


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  105  TLLEALKASFIE  70
            TLLE  K  F E
Sbjct  458  TLLESEKNTFME  469


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2699  IEELRQHLL  2725
             I+E R HLL
Sbjct  4     IDETRAHLL  12


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +2

Query  824  FQP-----RSDTHVFSIIR  865
            FQ      RS  +VF I R
Sbjct  61   FQAKHLIERS--QVFNILR  77


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  2019  VPIALCPQIS  1990
             +PI  CP IS
Sbjct  377   IPIEVCP-IS  385


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2433  MHIFQ  2447
             MH FQ
Sbjct  58    MHFFQ  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = +3

Query  6174  RM-----ILIPIVVAG  6206
             RM     I  P VVAG
Sbjct  280   RMAMGLRIKFPTVVAG  295


 Score = 17.6 bits (34),  Expect(2) = 17505
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8883  TLLSPGHP  8860
             TL+  GHP
Sbjct  402   TLMATGHP  409


 Score = 15.1 bits (28),  Expect(2) = 17505
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  8861  HPM  8853
             HPM
Sbjct  408   HPM  410


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5946  KHMIQR  5963
             KH+I+R
Sbjct  64    KHLIER  69


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4742  FRSTHPT  4762
             FR  HPT
Sbjct  120   FRFAHPT  126


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4009  CSQWI  4023
             CS WI
Sbjct  133   CSKWI  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6193  IGISII  6176
             IGI II
Sbjct  258   IGIKII  263


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6791  TLKQIA  6808
             TLKQ A
Sbjct  445   TLKQLA  450


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -3

Query  1505  NNLSLVPKIASLH  1467
             N L + PK A LH
Sbjct  74    NILRMMPKGAALH  86


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3797  PYLFH  3783
             PY FH
Sbjct  326   PYFFH  330


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5199  DIFLGFGSM  5225
             ++F+G G M
Sbjct  431   EVFMGIGGM  439


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5743  LIERAE  5760
             LIER +
Sbjct  66    LIERSQ  71


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6912  NFSTVIQH  6935
             NF  V QH
Sbjct  159   NFTLVTQH  166


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2305  FSTVFF  2288
             F T+FF
Sbjct  181   FETIFF  186


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2685  CPIS  2674
             CPIS
Sbjct  382   CPIS  385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8351  ATHLIAKS  8328
             A HLI  S
Sbjct  63    AKHLIERS  70


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  479  WPVRNI  496
            W VRN+
Sbjct  97   WLVRNV  102


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3700  GTSTQRN  3720
             GTS  RN
Sbjct  338   GTSIDRN  344


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6721  KCSPW  6707
             KCS W
Sbjct  132   KCSKW  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7628  PEIYYSN  7608
             PE+ Y N
Sbjct  167   PEVIYTN  173


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  9074  LPVLGLSG  9097
             LPV  LSG
Sbjct  224   LPVYELSG  231


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3996  RITFP  3982
             RI FP
Sbjct  286   RIKFP  290


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4022  YIEAEVIPA  4048
             Y EA  IPA
Sbjct  311   YKEALMIPA  319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8090  LLLIVTRI  8113
             L+L  TRI
Sbjct  349   LMLNTTRI  356


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3734  QVDKLVS  3754
             QV KLVS
Sbjct  387   QVLKLVS  393


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3171  VPTLM  3185
             V TLM
Sbjct  400   VATLM  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8045  DLRSL  8059
             DLR L
Sbjct  442   DLRTL  446


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  621  DTKEAL  638
            +TKE L
Sbjct  27   NTKEEL  32


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6734  KIGNMRQA  6757
             KI  M +A
Sbjct  41    KIAEMKEA  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2570  IFQSSM  2587
             IF  SM
Sbjct  53    IFPPSM  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7524  LSTARI  7507
             L T RI
Sbjct  351   LNTTRI  356


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2351  DFWEVQLGI  2377
             DF EV +GI
Sbjct  428   DFYEVFMGI  436


>gb|ACU00111.1|  V-set and transmembrane domain containing 1 isoform c [Homo sapiens]
Length=116

 GENE ID: 284415 VSTM1 | V-set and transmembrane domain containing 1
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 10/31 (32%)
 Frame = -3

Query  2630  LCLD----FVF*KALRFLSCYFGILLVILSI  2550
             LCLD    FV   A  F SC   ILL  LS+
Sbjct  9     LCLDTRTIFV---AI-F-SC-ISILLLFLSV  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5383  APFLALLC  5360
             A FL LLC
Sbjct  3     AEFLSLLC  10


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  852  SALSEGA--TPQD  884
            SALSE A  T Q+
Sbjct  92   SALSEAASDTTQE  104


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5716  FVLIFSYI  5693
             FV IFS I
Sbjct  17    FVAIFSCI  24


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/28 (35%), Positives = 10/28 (35%), Gaps = 17/28 (60%)
 Frame = -1

Query  6685  FSCI--------VVGSCTINF--YRCVQ  6632
             FSCI        V       F  YRC Q
Sbjct  21    FSCISILLLFLSV-------FIIYRCSQ  41


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  4554  TTFMSLLSCI  4525
             T F    SCI
Sbjct  15    TIFVAIFSCI  24


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 10/16 (62%), Gaps = 6/16 (37%)
 Frame = -2

Query  516  VFV--YS----LLMFL  487
            +FV  +S    LL+FL
Sbjct  16   IFVAIFSCISILLLFL  31


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7578  FAPLLCL  7598
             F  LLCL
Sbjct  5     FLSLLCL  11


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6809  SKLREQ  6826
             SKL EQ
Sbjct  56    SKLPEQ  61


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1462  MVAEF  1448
             M AEF
Sbjct  1     MTAEF  5


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +1

Query  3904  SAKRRSHAWTSRL  3942
             S KR SH   S L
Sbjct  49    STKRTSH---SKL  58


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  8702  VALCVVDPQ  8676
             V L   DPQ
Sbjct  74    VSLSTADPQ  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  562  LSSSDP  545
            LS  DP
Sbjct  76   LSTADP  81


>pdb|3DVN|B  Chain B, Crystal Structure Of K63-Specific Fab Apu2.16 Bound 
To K63- Linked Di-Ubiquitin
 pdb|3DVN|H  Chain H, Crystal Structure Of K63-Specific Fab Apu2.16 Bound 
To K63- Linked Di-Ubiquitin
Length=230


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 16/35 (45%)
 Frame = -1

Query  3943  TVYLSMHGFSF*LTFI----TAGYYFFC---YYRW  3860
             T YL M              TA YY  C   YYRW
Sbjct  81    TAYLQMNS-------LRAEDTAVYY--CAREYYRW  106


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  184   GLYSLSSV--VT  193


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4040  IPAETGQETAY  4072
             I A+T   TAY
Sbjct  73    ISADTSKNTAY  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  177   PAVLQSS  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  176   FPAVLQSS  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  195   PSSSLGTQTYICNV  208


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  196   SSSLGTQTY  204


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  180   LQSSGL  185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  25    CAASGF  30


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7685  TSLIH  7699
             T LIH
Sbjct  34    TGLIH  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  89    LRAE  92


>pdb|3DVG|B  Chain B, Crystal Structure Of K63-Specific Fab Apu.3a8 Bound 
To K63- Linked Di-Ubiquitin
Length=230


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 16/35 (45%)
 Frame = -1

Query  3943  TVYLSMHGFSF*LTFI----TAGYYFFC---YYRW  3860
             T YL M              TA YY  C   YYRW
Sbjct  81    TAYLQMNS-------LRAEDTAVYY--CAREYYRW  106


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  184   GLYSLSSV--VT  193


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4040  IPAETGQETAY  4072
             I A+T   TAY
Sbjct  73    ISADTSKNTAY  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  177   PAVLQSS  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  176   FPAVLQSS  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  195   PSSSLGTQTYICNV  208


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  196   SSSLGTQTY  204


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  180   LQSSGL  185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  25    CAASGF  30


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7685  TSLIH  7699
             T LIH
Sbjct  34    TGLIH  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  89    LRAE  92


>ref|NP_001129493.1|  nuclear factor of activated T-cells, cytoplasmic 2 isoform D 
[Homo sapiens]
Length=901

 GENE ID: 4773 NFATC2 | nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -1

Query  9040  RHSPVPPRP  9014
             RHSPV PRP
Sbjct  214   RHSPV-PRP  221


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  7158  MSPRSSDLEEE  7190
             MSPR S L E+
Sbjct  200   MSPRTS-LAED  209


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8953  RTADIEL  8973
             R ADIEL
Sbjct  502   RNADIEL  508


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  8856  HAGSQGVTSWCSLL  8815
             HAGSQG  S   LL
Sbjct  767   HAGSQGQSS--ALL  778


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = -1

Query  8992  AESP------L*QARCQQF  8954
             AESP      +  A CQQF
Sbjct  695   AESPSCLVATM--APCQQF  711


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNP  V YQ
Sbjct  725   QNPAAVLYQ  733


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6441  AKPAGA  6424
             AKPAGA
Sbjct  81    AKPAGA  86


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  2037  VGPTNTVPIALCPQ  1996
             V P N  P  LCPQ
Sbjct  171   VSPNNGGPDDLCPQ  184


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             PSP PS +V
Sbjct  255   PSPQPSSHV  263


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/37 (29%), Positives = 12/37 (32%), Gaps = 24/37 (64%)
 Frame = -2

Query  4368  SPALYPP---------------------IPPFLLKLW  4321
             SPA YPP                     IPP   K+W
Sbjct  270   SPAGYPPVAGSAVIMDALNSLATDSPCGIPP---KMW  303


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  495  MFLTGQD  475
            M LTGQ+
Sbjct  576  MILTGQN  582


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5017  DPTLLC  5000
             DPTL C
Sbjct  670   DPTLIC  675


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  403  QGERKN  420
            QGER N
Sbjct  337  QGERRN  342


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8071  LPPLE  8085
             LPPLE
Sbjct  374   LPPLE  378


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6909  GNFSTVIQH  6935
             G + TVIQ+
Sbjct  838   GSYPTVIQQ  846


 Score = 18.0 bits (35),  Expect(2) =  8047
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -3

Query  9068  SCLYAGSEG--SPLPSPA  9021
             SCL     G  SP P PA
Sbjct  210   SCL-----GRHSPVPRPA  222


 Score = 15.9 bits (30),  Expect(2) =  8047
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  9000  SPQR  8989
             SPQR
Sbjct  248   SPQR  251


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  484  RPGLTANRSSS  452
            RP   A RSSS
Sbjct  220  RP---ASRSSS  227


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6787  IPFCSTNVT  6761
             IP CS  VT
Sbjct  363   IPICSIPVT  371


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4207  IVGNSK  4190
             IVGN K
Sbjct  472   IVGNTK  477


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4167  QQAALTVAPVKL  4132
             QQ AL  AP  L
Sbjct  746   QQPALMAAPLSL  757


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7412  IVQQQN  7429
             ++QQQN
Sbjct  843   VIQQQN  848


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4981  GVNIKQD  5001
             GV IKQ+
Sbjct  871   GVTIKQE  877


 Score = 17.2 bits (33),  Expect(2) = 11686
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1083  SILFVP  1066
             SIL VP
Sbjct  347   SILLVP  352


 Score = 15.9 bits (30),  Expect(2) = 11686
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  974  IPFCS  960
            IP CS
Sbjct  363  IPICS  367


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 11/32 (34%)
 Frame = -1

Query  298  RTHQSP---P---LA--SCRARFSK-PSPASR  230
            RT  SP   P   LA  SC  R S  P PASR
Sbjct  195  RT--SPIMSPRTSLAEDSCLGRHSPVPRPASR  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  540  QTGSEELR  563
            Q GS ELR
Sbjct  384  QSGSYELR  391


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1582  VERKDT  1599
             VER DT
Sbjct  560   VERQDT  565


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +3

Query  7140  MVV------IATMSP  7166
             MV       +ATM P
Sbjct  693   MVAESPSCLVATMAP  707


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4797  PNML  4786
             PNML
Sbjct  615   PNML  618


 Score = 16.8 bits (32),  Expect(2) = 19959
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  224  PLVSLS  207
            PL SLS
Sbjct  54   PLASLS  59


 Score = 15.1 bits (28),  Expect(2) = 19959
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  296  YSPVA  282
            YSP A
Sbjct  52   YSPLA  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  6091  ILM-HLFYHV  6065
             IL  H FY+V
Sbjct  447   ILKPHAFYQV  456


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2428  HIQYC  2414
             HI YC
Sbjct  810   HIMYC  814


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5355  TRQRRARNG  5381
             T QR A NG
Sbjct  850   TSQRAAKNG  858


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4890  LADQLI--HL  4913
             L D+LI  HL
Sbjct  885   LDDELIDTHL  894


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  606  RIEI  617
            RIEI
Sbjct  92   RIEI  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7513  QDSCL  7499
             +DSCL
Sbjct  208   EDSCL  212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  361   PAIPI  365


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3254  PKFKLPI  3274
             P F LP+
Sbjct  129   PRFTLPV  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5107  GTSPRRPR  5130
             G SP R R
Sbjct  246   GASPQRSR  253


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6703  SLDTDS  6686
             SL TDS
Sbjct  289   SLATDS  294


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3726  PPIPLC  3709
             P IP C
Sbjct  361   PAIPIC  366


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4894  ASSGS  4880
             ASSGS
Sbjct  150   ASSGS  154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6715  SPWSSLDTDS  6686
             SP  SL  DS
Sbjct  201   SPRTSLAEDS  210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5114  APEDQG  5131
             AP+D+G
Sbjct  264   APQDHG  269


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  9041  SPLPSPAQATP  9009
             SP PSP  A P
Sbjct  306   SPDPSPVSAAP  316


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -2

Query  4635  SSCLL---AT--QSSPAI  4597
             SS LL    T  Q SP I
Sbjct  774   SSALLHPSPTNQQASPVI  791


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1405  PGPP  1394
             PGPP
Sbjct  824   PGPP  827


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4813  SPVCRP  4796
             SPV RP
Sbjct  216   SPVPRP  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8675  IKDILSSL  8652
             I D L SL
Sbjct  283   IMDALNSL  290


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  7247  PLGVAPTKA  7273
             P   AP KA
Sbjct  311   PVSAAPSKA  319


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1970  QYDQILI  1990
             +YD  LI
Sbjct  668   EYDPTLI  674


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2732  GLTTPD  2749
             GL  PD
Sbjct  714   GLSSPD  719


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  583  ATVLY  569
            A VLY
Sbjct  728  AAVLY  732


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7094  QIRCSS  7111
             Q RC S
Sbjct  799   QLRCGS  804


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4371  LSPALYP  4351
             LSP  YP
Sbjct  835   LSPGSYP  841


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6666  PTTIQE  6683
             PT IQ+
Sbjct  841   PTVIQQ  846


>sp|A8K7I4.2|CLCA1_HUMAN  RecName: Full=Calcium-activated chloride channel regulator 1; 
AltName: Full=Calcium-activated chloride channel family member 
1; Short=hCLCA1; AltName: Full=Calcium-activated chloride 
channel protein 1; Short=CaCC-1; Short=hCaCC-1; Flags: Precursor
Length=914

 GENE ID: 1179 CLCA1 | chloride channel accessory 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 4/17 (23%)
 Frame = +3

Query  1341  ALGPAAT--LEEM--MT  1379
             ALGP A   LEE+  MT
Sbjct  436   ALGPSAAQELEELSKMT  452


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +3

Query  1152  IVRMYSPTSILDIR  1193
             I+R    TSILD R
Sbjct  789   IIRI--STSILDLR  800


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  7097  IRCSSNITG  7123
             +RCS  ITG
Sbjct  185   VRCSAGITG  193


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6540  VDTTGLIP  6517
             V+TT LIP
Sbjct  809   VNTTALIP  816


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4354  PPNPPFS  4334
             PPNP FS
Sbjct  292   PPNPTFS  298


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -2

Query  4068  AVSCPVSAGIT  4036
             AV C  SAGIT
Sbjct  184   AVRC--SAGIT  192


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 8/20 (40%)
 Frame = -2

Query  7527  YLSTARILAWSCLMPQTVSC  7468
             YLS  RI        Q V C
Sbjct  176   YLSNGRI--------QAVRC  187


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3717  ELEEMNK  3737
             ELEE+ K
Sbjct  444   ELEELSK  450


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 1/21 (4%)
 Frame = -2

Query  8301  GMWRIALQAPCTTSITLSVPS  8239
             G W   LQA   T  TL V S
Sbjct  562   GTWKYSLQASSQT-LTLTVTS  581


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2198  VEICTE  2215
             VE CTE
Sbjct  247   VEFCTE  252


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5159  TLELLE  5176
             TLELL+
Sbjct  639   TLELLD  644


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1944  ELEVLSK  1964
             ELE LSK
Sbjct  444   ELEELSK  450


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = -3

Query  3086  SVFLLLSLLMGHNTLHVLVLLE  3021
             SVF L         LH   LLE
Sbjct  7     SVFILI--------LH---LLE  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3228  SVVIFCT  3208
             S+V FCT
Sbjct  245   SIVEFCT  251


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = -1

Query  1444  TW---LIASAKTLAL  1409
             TW   L AS  TL L
Sbjct  563   TWKYSLQASSQTLTL  577


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  540  EGMVVAV  520
            EG VVA+
Sbjct  33   EGIVVAI  39


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4824  ASLFLL  4807
             ASL+LL
Sbjct  60    ASLYLL  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  851  FSIIRRSHPT  880
            F +IR   PT
Sbjct  393  FTVIRKKYPT  402


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  2810  WTVQP--IVL  2833
             WT QP  I L
Sbjct  522   WTTQPPQILL  531


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4645  VLILIL  4628
             V ILIL
Sbjct  8     VFILIL  13


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2459  EDFRKYTAFT  2488
             EDF K T  T
Sbjct  280   EDFKKTTPMT  289


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +2

Query  1865  LLDTGA------DDTV  1894
             LLD GA      DD V
Sbjct  642   LLDNGAGADATKDDGV  657


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7642  IPNLF  7628
             IP+LF
Sbjct  747   IPDLF  751


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5376  FLLSSVE  5356
             FLL  VE
Sbjct  333   FLLQTVE  339


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6463  DVQWN  6477
             ++QWN
Sbjct  706   EIQWN  710


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8461  CFSR  8450
             CFSR
Sbjct  727   CFSR  730


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2706  SSIFVL  2689
             SS+F+L
Sbjct  6     SSVFIL  11


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1083  MTNNPPIP  1106
             MT  PP P
Sbjct  288   MTTQPPNP  295


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +1

Query  8128  TQGVGSPQIL  8157
             TQ    PQIL
Sbjct  524   TQ---PPQIL  530


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1185  DIRQG  1199
             +IRQG
Sbjct  613   NIRQG  617


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3065  DLIAEIQ  3085
             DL AEI+
Sbjct  758   DLKAEIH  764


 Score = 15.1 bits (28),  Expect(2) = 39307
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2808  NGQYS  2822
             NG YS
Sbjct  668   NGRYS  672


 Score = 15.1 bits (28),  Expect(2) = 39307
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2830  AARKR  2844
             AAR R
Sbjct  683   AARRR  687


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8678  QIKD  8667
             QIKD
Sbjct  52    QIKD  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9059  ISSCF  9073
             IS CF
Sbjct  418   ISGCF  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6944  NSTWFNST  6967
             NS W N T
Sbjct  498   NSQWMNGT  505


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1799  PQVTLW  1816
             PQ+ LW
Sbjct  527   PQILLW  532


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8327  FPSP  8316
             FPSP
Sbjct  604   FPSP  607


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 6/18 (33%)
 Frame = +2

Query  7859  IVFAVLSIVNRVRQGYSP  7912
             +V+A     N +RQG SP
Sbjct  609   VVYA-----N-IRQGASP  620


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7271  AKRRVV  7288
             A RRV+
Sbjct  684   ARRRVI  689


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  344  RTHLSP  327
            R HL P
Sbjct  131  RIHLTP  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5449  CYCKKCCF  5472
             CY K C F
Sbjct  205   CYTKRCTF  212


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1673  EFSSEQ  1690
             EF  EQ
Sbjct  248   EFCTEQ  253


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  853  QHYQKEPPHK  882
            Q   KE P K
Sbjct  253  QNHNKEAPNK  262


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4523  VIQDNSDIK  4549
             VI D  D K
Sbjct  275   VIRDSEDFK  283


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2672  LEIGQ  2686
             L+IGQ
Sbjct  300   LQIGQ  304


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6830  QIVLL  6816
             +IVLL
Sbjct  406   EIVLL  410


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  2460  KTSGSILH  2483
             K SG I H
Sbjct  426   KQSGAIIH  433


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3832  PITV  3821
             PITV
Sbjct  590   PITV  593


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4365  PALYPP  4348
             P L+PP
Sbjct  748   PDLFPP  753


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3777  NSTFLIP  3757
             N T LIP
Sbjct  810   NTTALIP  816


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  4266  CPIIFFNSLFIDSTTP  4219
             CP I      I+ST P
Sbjct  884   CPNIH-----INSTIP  894


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5269  CPSIPI  5252
             CP I I
Sbjct  884   CPNIHI  889


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2498  INNETPGI  2521
             IN   PGI
Sbjct  889   INSTIPGI  896


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3504  LTQQI  3518
             L QQI
Sbjct  49    LIQQI  53


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3536  LVTQSS  3519
             +VTQ S
Sbjct  56    MVTQAS  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1746  TPPQKQEP  1769
             TPP   EP
Sbjct  110   TPPGNDEP  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2744  PDKKHQK  2764
             P+K  QK
Sbjct  260   PNKQNQK  266


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  596  TIEGCY  579
            TI GC+
Sbjct  417  TISGCF  422


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8520  AQEEEE  8537
             AQE EE
Sbjct  442   AQELEE  447


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3545  LALQDS  3562
             L LQ+S
Sbjct  494   LTLQNS  499


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3842  ASDFNLPPV  3868
             AS+  LPP+
Sbjct  583   ASNATLPPI  591


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7561  TPNPQE  7544
             TP P E
Sbjct  874   TPSPDE  879


>ref|NP_001116436.1|  serine/threonine-protein phosphatase 4 regulatory subunit 3B 
isoform 1 [Homo sapiens]
Length=849

 GENE ID: 57223 SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
 Frame = +2

Query  3614  QAQPDQSESE--LVNQIIEQLI  3673
             +AQ  QS+ +  L+N +IEQ+I
Sbjct  405   EAQ--QSDDDILLINVVIEQMI  424


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2421  STVTDFFFFN  2392
             ST T F FFN
Sbjct  289   STLTSFIFFN  298


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  3131  FKNLKTGKY  3157
             FK LKT KY
Sbjct  672   FKGLKT-KY  679


 Score = 19.3 bits (38),  Expect(2) =  3042
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -1

Query  2842  FFWQHYRLYC-PFI  2804
             FF  HYR Y   FI
Sbjct  491   FFLKHYR-YSWSFI  503


 Score = 16.8 bits (32),  Expect(2) =  3042
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  2722  QMLS---QLLYFC  2693
             Q+L    +LL FC
Sbjct  542   QLLALILELLTFC  554


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -3

Query  7412  YQ----TIIVW  7392
             YQ    T IVW
Sbjct  62    YQKQQDTLIVW  72


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  7396  TIIVWYSAAAEQFAEGY  7446
             T IVW     E  AE Y
Sbjct  68    TLIVW----SE--AENY  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  3248  KTPKFK--LPI  3274
             KT KFK   PI
Sbjct  244   KTAKFKEVIPI  254


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2604  LLENKI  2621
             LLE KI
Sbjct  51    LLESKI  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2966  EVIPLT  2983
             EVIP T
Sbjct  250   EVIPIT  255


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 22/44 (50%)
 Frame = -3

Query  3077  LLLSLL---MGHNTLH-------------VLVLLES------LC  3012
             L L LL     H T H             VLVL+ S      LC
Sbjct  546   LILELLTFCVEHHTYHIKNYIMNKDLLRRVLVLMNSKHTFLALC  589


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4007  HVASGYIE  4030
             HV S Y+E
Sbjct  26    HVSSTYVE  33


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7495  LLDAPDCEL  7469
             L D P CEL
Sbjct  131   LIDLPTCEL  139


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1703  SPTRRE  1720
             SP RRE
Sbjct  155   SPIRRE  160


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5065  FIFF  5054
             FIFF
Sbjct  294   FIFF  297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4235  MNKEL  4249
             MNK+L
Sbjct  567   MNKDL  571


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1224  VDRFYKTL  1247
             V+ FYK L
Sbjct  656   VENFYKAL  663


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2380  TSRRVK  2397
             T RRVK
Sbjct  4     TRRRVK  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3053  DPS----KDLIAE  3079
             DPS     DLI E
Sbjct  104   DPSVEVTQDLIDE  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4948  LIAESE  4931
             LI ESE
Sbjct  113   LIDESE  118


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8144  LPTPCV  8127
             LPTP V
Sbjct  277   LPTPSV  282


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4257  IFFN  4246
             IFFN
Sbjct  295   IFFN  298


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2303  KWRKLVDF  2326
             K R LV+F
Sbjct  329   KRRELVNF  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  583   HTFLAL  588


 Score = 16.8 bits (32),  Expect(2) = 20460
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6645  TDVFS  6631
             TD+FS
Sbjct  384   TDIFS  388


 Score = 15.1 bits (28),  Expect(2) = 20460
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6613  SIVRE  6599
             S VRE
Sbjct  396   SMVRE  400


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  1422  LAEAMSQVTNSAT  1460
             L E   Q T+ AT
Sbjct  313   LSEVFAQLTDEAT  325


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4881  DPEL--ADQL  4904
             DPEL  A QL
Sbjct  428   DPELGGAVQL  437


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4347  LGGTVQ  4364
             LGG VQ
Sbjct  431   LGGAVQ  436


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2065  QISSNYVD  2042
             ++SS YV+
Sbjct  26    HVSSTYVE  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1862  ALLDTG  1879
             ALLD G
Sbjct  621   ALLDNG  626


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2809  FIRME  2795
             FIR E
Sbjct  642   FIRVE  646


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  4944  IR----KALLGHIV  4973
             IR    K L  HIV
Sbjct  643   IRVEDIKSLTAHIV  656


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +1

Query  3265  TAHTKGNMGNMVD  3303
             TA TKG +  +VD
Sbjct  815   TA-TKGSLVGLVD  826


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8295  TYLEE  8309
             TY EE
Sbjct  30    TYVEE  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6130  KINP  6141
             KINP
Sbjct  55    KINP  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3529  VTSNLSS  3549
             VTS LSS
Sbjct  149   VTSVLSS  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6293  FFYKLDII  6316
             FF K +I+
Sbjct  296   FFNKVEIV  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  425  IKTYSMGK  448
            IK Y M K
Sbjct  562  IKNYIMNK  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  979  TLSHSA  962
            T SHSA
Sbjct  775  TFSHSA  780


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1382  MSGSRR  1399
             MS  RR
Sbjct  1     MSDTRR  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  4790  ILGSAYRRKRLA  4825
             +L S  RR  LA
Sbjct  152   VLSSPIRREKLA  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4600  HLFSII  4583
             HL+ II
Sbjct  193   HLYEII  198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1999  TDFYEYLI  1976
             TD + YL+
Sbjct  384   TDIFSYLV  391


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5250  LMGIL  5264
             LMG L
Sbjct  437   LMGLL  441


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7105  FIKYYR  7122
             F K YR
Sbjct  492   FLKHYR  497


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5389  LLAPFLALL  5363
             LLA  L LL
Sbjct  543   LLALILELL  551


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7778  TNLP  7767
             TNLP
Sbjct  808   TNLP  811


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  618  LSLSF  604
            L LSF
Sbjct  80   LALSF  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 11/19 (57%)
 Frame = +1

Query  5731  LIDRLIERAEDSGNESEGE  5787
             LID           ESE E
Sbjct  113   LID-----------ESEEE  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2106  LLRLYQ  2123
             LL L+Q
Sbjct  175   LLQLFQ  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3462  DMLLI  3476
             D LLI
Sbjct  412   DILLI  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1124  FINFSY  1107
             F NF Y
Sbjct  462   FLNFFY  467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3846  LAIALQLL  3823
             LA  L+LL
Sbjct  544   LALILELL  551


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7814  IKLFIM  7831
             IK +IM
Sbjct  562   IKNYIM  567


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  612  EIKDTKEALDK  644
            E K  KE  DK
Sbjct  750  ETKKAKESEDK  760


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8648  LPKKT  8662
             LPK T
Sbjct  763   LPKRT  767


>sp|Q8IUD6.2|RN135_HUMAN  RecName: Full=E3 ubiquitin-protein ligase RNF135; AltName: Full=RING 
finger protein 135; AltName: Full=Riplet; AltName: Full=RIG-I 
E3 ubiquitin ligase; Short=REUL
Length=432

 GENE ID: 84282 RNF135 | ring finger protein 135 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +1

Query  5998  HRPQPTRSSIGKCDR  6042
             HRPQP R S   C+R
Sbjct  285   HRPQPYRWS---CER  296


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = -2

Query  4638  SSSCLLATQSSPA  4600
             SSSC L  QS PA
Sbjct  235   SSSCPLPDQSHPA  247


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  2768  PPFLWMGYELHP  2803
             P F W+ Y LHP
Sbjct  412   PAF-WL-YGLHP  421


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7498  ELLDAP  7481
             ELL+AP
Sbjct  228   ELLEAP  233


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/30 (40%), Positives = 14/30 (46%), Gaps = 9/30 (30%)
 Frame = -1

Query  5581  EKLDES----DCSD-----ELFVAVSASSC  5519
             EKL ES    +  +     EL  A S SSC
Sbjct  209   EKLQESVTWKEAPEAQMQGELLEAPSSSSC  238


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8795  IWLN  8784
             IWLN
Sbjct  378   IWLN  381


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5894  VPVW  5905
             VPVW
Sbjct  10    VPVW  13


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3994  PGSSSC  4011
             P SSSC
Sbjct  233   PSSSSC  238


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  930  QMLKETI  950
            +M KET+
Sbjct  361  HMVKETV  367


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1795  LPSGHS  1812
             LP GHS
Sbjct  34    LPCGHS  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1699  QQPH  1710
             QQPH
Sbjct  68    QQPH  71


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 13/24 (54%)
 Frame = +2

Query  5111  QAPED--QGPQREPHNEWTLELLE  5176
             +APE   QG           ELLE
Sbjct  219   EAPEAQMQG-----------ELLE  231


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2840  KDSWTV  2857
             KDS TV
Sbjct  276   KDSRTV  281


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  6897  KL---CVTISGSPP  6865
             KL   C TIS S P
Sbjct  397   KLLYEC-TISASSP  409


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3147  QENMQE  3164
             QE +QE
Sbjct  208   QEKLQE  213


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3438  LLAAPS  3421
             LL APS
Sbjct  229   LLEAPS  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1911  KLISSNT  1891
             KL+ S+T
Sbjct  186   KLVTSDT  192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3810  CSSWALSIPS  3781
             CS WA  + S
Sbjct  322   CSHWAVGVAS  331


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1683  EENSLAF  1663
             EE  LAF
Sbjct  383   EEGKLAF  389


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9067  LLFACT  9084
             LL+ CT
Sbjct  398   LLYECT  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1668  PGNFL  1682
             PGN+L
Sbjct  421   PGNYL  425


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5814  HPHLHK  5797
             +PHL K
Sbjct  69    QPHLRK  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = +3

Query  4872  TQVDPELADQLI-HL  4913
             T+V  EL + L+ HL
Sbjct  132   TEVAQELTE-LVEHL  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2943  RSLHN  2929
             RSL+N
Sbjct  150   RSLQN  154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  490  SNRPG  476
            S+RPG
Sbjct  370  SDRPG  374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2162  QWPLTE  2179
             Q PL E
Sbjct  155   QRPLSE  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1001  RPCMHW  984
             R C HW
Sbjct  320   RNCSHW  325


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8922  RDEMLG  8905
             RD+ LG
Sbjct  336   RDQVLG  341


>sp|Q5MIZ7.1|P4R3B_HUMAN  RecName: Full=Serine/threonine-protein phosphatase 4 regulatory 
subunit 3B; AltName: Full=SMEK homolog 2
Length=849

 GENE ID: 57223 SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
 Frame = +2

Query  3614  QAQPDQSESE--LVNQIIEQLI  3673
             +AQ  QS+ +  L+N +IEQ+I
Sbjct  405   EAQ--QSDDDILLINVVIEQMI  424


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2421  STVTDFFFFN  2392
             ST T F FFN
Sbjct  289   STLTSFIFFN  298


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  3131  FKNLKTGKY  3157
             FK LKT KY
Sbjct  672   FKGLKT-KY  679


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -3

Query  7412  YQ----TIIVW  7392
             YQ    T IVW
Sbjct  62    YQKQQDTLIVW  72


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  7396  TIIVWYSAAAEQFAEGY  7446
             T IVW     E  AE Y
Sbjct  68    TLIVW----SE--AENY  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  3248  KTPKFK--LPI  3274
             KT KFK   PI
Sbjct  244   KTAKFKEVIPI  254


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2604  LLENKI  2621
             LLE KI
Sbjct  51    LLESKI  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2966  EVIPLT  2983
             EVIP T
Sbjct  250   EVIPIT  255


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 22/44 (50%)
 Frame = -3

Query  3077  LLLSLL---MGHNTLH-------------VLVLLES------LC  3012
             L L LL     H T H             VLVL+ S      LC
Sbjct  546   LILELLTFCVEHHTYHIKNYIMNKDLLRRVLVLMNSKHTFLALC  589


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4007  HVASGYIE  4030
             HV S Y+E
Sbjct  26    HVSSTYVE  33


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7495  LLDAPDCEL  7469
             L D P CEL
Sbjct  131   LIDLPTCEL  139


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1703  SPTRRE  1720
             SP RRE
Sbjct  155   SPIRRE  160


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2842  FFWQHYR  2822
             FF  HYR
Sbjct  491   FFLKHYR  497


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5065  FIFF  5054
             FIFF
Sbjct  294   FIFF  297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4235  MNKEL  4249
             MNK+L
Sbjct  567   MNKDL  571


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1224  VDRFYKTL  1247
             V+ FYK L
Sbjct  656   VENFYKAL  663


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2380  TSRRVK  2397
             T RRVK
Sbjct  4     TRRRVK  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3053  DPS----KDLIAE  3079
             DPS     DLI E
Sbjct  104   DPSVEVTQDLIDE  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4948  LIAESE  4931
             LI ESE
Sbjct  113   LIDESE  118


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8144  LPTPCV  8127
             LPTP V
Sbjct  277   LPTPSV  282


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4257  IFFN  4246
             IFFN
Sbjct  295   IFFN  298


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2303  KWRKLVDF  2326
             K R LV+F
Sbjct  329   KRRELVNF  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  583   HTFLAL  588


 Score = 16.8 bits (32),  Expect(2) = 20460
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6645  TDVFS  6631
             TD+FS
Sbjct  384   TDIFS  388


 Score = 15.1 bits (28),  Expect(2) = 20460
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6613  SIVRE  6599
             S VRE
Sbjct  396   SMVRE  400


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  1422  LAEAMSQVTNSAT  1460
             L E   Q T+ AT
Sbjct  313   LSEVFAQLTDEAT  325


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4881  DPEL--ADQL  4904
             DPEL  A QL
Sbjct  428   DPELGGAVQL  437


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4347  LGGTVQ  4364
             LGG VQ
Sbjct  431   LGGAVQ  436


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2065  QISSNYVD  2042
             ++SS YV+
Sbjct  26    HVSSTYVE  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  2722  QMLS---QLLYFC  2693
             Q+L    +LL FC
Sbjct  542   QLLALILELLTFC  554


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1862  ALLDTG  1879
             ALLD G
Sbjct  621   ALLDNG  626


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2809  FIRME  2795
             FIR E
Sbjct  642   FIRVE  646


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  4944  IR----KALLGHIV  4973
             IR    K L  HIV
Sbjct  643   IRVEDIKSLTAHIV  656


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +1

Query  3265  TAHTKGNMGNMVD  3303
             TA TKG +  +VD
Sbjct  815   TA-TKGSLVGLVD  826


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8295  TYLEE  8309
             TY EE
Sbjct  30    TYVEE  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6130  KINP  6141
             KINP
Sbjct  55    KINP  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3529  VTSNLSS  3549
             VTS LSS
Sbjct  149   VTSVLSS  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6293  FFYKLDII  6316
             FF K +I+
Sbjct  296   FFNKVEIV  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  982  CTLSHS  965
            CT SHS
Sbjct  504  CTPSHS  509


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  425  IKTYSMGK  448
            IK Y M K
Sbjct  562  IKNYIMNK  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  979  TLSHSA  962
            T SHSA
Sbjct  775  TFSHSA  780


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1382  MSGSRR  1399
             MS  RR
Sbjct  1     MSDTRR  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  4790  ILGSAYRRKRLA  4825
             +L S  RR  LA
Sbjct  152   VLSSPIRREKLA  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4600  HLFSII  4583
             HL+ II
Sbjct  193   HLYEII  198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1999  TDFYEYLI  1976
             TD + YL+
Sbjct  384   TDIFSYLV  391


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5250  LMGIL  5264
             LMG L
Sbjct  437   LMGLL  441


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7105  FIKYYR  7122
             F K YR
Sbjct  492   FLKHYR  497


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5389  LLAPFLALL  5363
             LLA  L LL
Sbjct  543   LLALILELL  551


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7778  TNLP  7767
             TNLP
Sbjct  808   TNLP  811


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  618  LSLSF  604
            L LSF
Sbjct  80   LALSF  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 11/19 (57%)
 Frame = +1

Query  5731  LIDRLIERAEDSGNESEGE  5787
             LID           ESE E
Sbjct  113   LID-----------ESEEE  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2106  LLRLYQ  2123
             LL L+Q
Sbjct  175   LLQLFQ  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3462  DMLLI  3476
             D LLI
Sbjct  412   DILLI  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1124  FINFSY  1107
             F NF Y
Sbjct  462   FLNFFY  467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3335  WEFVNTP  3355
             W FV TP
Sbjct  500   WSFVCTP  506


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3846  LAIALQLL  3823
             LA  L+LL
Sbjct  544   LALILELL  551


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7814  IKLFIM  7831
             IK +IM
Sbjct  562   IKNYIM  567


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  612  EIKDTKEALDK  644
            E K  KE  DK
Sbjct  750  ETKKAKESEDK  760


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8648  LPKKT  8662
             LPK T
Sbjct  763   LPKRT  767


>ref|NP_065196.1|  serine/threonine-protein phosphatase 4 regulatory subunit 3B 
isoform 2 [Homo sapiens]
Length=764

 GENE ID: 57223 SMEK2 | SMEK homolog 2, suppressor of mek1 (Dictyostelium)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
 Frame = +2

Query  3614  QAQPDQSESE--LVNQIIEQLI  3673
             +AQ  QS+ +  L+N +IEQ+I
Sbjct  405   EAQ--QSDDDILLINVVIEQMI  424


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2421  STVTDFFFFN  2392
             ST T F FFN
Sbjct  289   STLTSFIFFN  298


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  3131  FKNLKTGKY  3157
             FK LKT KY
Sbjct  587   FKGLKT-KY  594


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -3

Query  7412  YQ----TIIVW  7392
             YQ    T IVW
Sbjct  62    YQKQQDTLIVW  72


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  7396  TIIVWYSAAAEQFAEGY  7446
             T IVW     E  AE Y
Sbjct  68    TLIVW----SE--AENY  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  3248  KTPKFK--LPI  3274
             KT KFK   PI
Sbjct  244   KTAKFKEVIPI  254


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2604  LLENKI  2621
             LLE KI
Sbjct  51    LLESKI  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2966  EVIPLT  2983
             EVIP T
Sbjct  250   EVIPIT  255


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4007  HVASGYIE  4030
             HV S Y+E
Sbjct  26    HVSSTYVE  33


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7495  LLDAPDCEL  7469
             L D P CEL
Sbjct  131   LIDLPTCEL  139


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1703  SPTRRE  1720
             SP RRE
Sbjct  155   SPIRRE  160


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5065  FIFF  5054
             FIFF
Sbjct  294   FIFF  297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1224  VDRFYKTL  1247
             V+ FYK L
Sbjct  571   VENFYKAL  578


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2380  TSRRVK  2397
             T RRVK
Sbjct  4     TRRRVK  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3053  DPS----KDLIAE  3079
             DPS     DLI E
Sbjct  104   DPSVEVTQDLIDE  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4948  LIAESE  4931
             LI ESE
Sbjct  113   LIDESE  118


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8144  LPTPCV  8127
             LPTP V
Sbjct  277   LPTPSV  282


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4257  IFFN  4246
             IFFN
Sbjct  295   IFFN  298


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2303  KWRKLVDF  2326
             K R LV+F
Sbjct  329   KRRELVNF  336


 Score = 16.8 bits (32),  Expect(2) = 21413
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6645  TDVFS  6631
             TD+FS
Sbjct  384   TDIFS  388


 Score = 15.1 bits (28),  Expect(2) = 21413
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6613  SIVRE  6599
             S VRE
Sbjct  396   SMVRE  400


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +3

Query  1422  LAEAMSQVTNSAT  1460
             L E   Q T+ AT
Sbjct  313   LSEVFAQLTDEAT  325


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4881  DPEL--ADQL  4904
             DPEL  A QL
Sbjct  428   DPELGGAVQL  437


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4347  LGGTVQ  4364
             LGG VQ
Sbjct  431   LGGAVQ  436


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2065  QISSNYVD  2042
             ++SS YV+
Sbjct  26    HVSSTYVE  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3383  EKEPIVG  3403
             EK+ IVG
Sbjct  488   EKDNIVG  494


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1862  ALLDTG  1879
             ALLD G
Sbjct  536   ALLDNG  541


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2809  FIRME  2795
             FIR E
Sbjct  557   FIRVE  561


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  4944  IR----KALLGHIV  4973
             IR    K L  HIV
Sbjct  558   IRVEDIKSLTAHIV  571


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +1

Query  3265  TAHTKGNMGNMVD  3303
             TA TKG +  +VD
Sbjct  730   TA-TKGSLVGLVD  741


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8295  TYLEE  8309
             TY EE
Sbjct  30    TYVEE  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6130  KINP  6141
             KINP
Sbjct  55    KINP  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3529  VTSNLSS  3549
             VTS LSS
Sbjct  149   VTSVLSS  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6293  FFYKLDII  6316
             FF K +I+
Sbjct  296   FFNKVEIV  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  979  TLSHSA  962
            T SHSA
Sbjct  690  TFSHSA  695


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1382  MSGSRR  1399
             MS  RR
Sbjct  1     MSDTRR  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  4790  ILGSAYRRKRLA  4825
             +L S  RR  LA
Sbjct  152   VLSSPIRREKLA  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4600  HLFSII  4583
             HL+ II
Sbjct  193   HLYEII  198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1999  TDFYEYLI  1976
             TD + YL+
Sbjct  384   TDIFSYLV  391


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5250  LMGIL  5264
             LMG L
Sbjct  437   LMGLL  441


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -2

Query  4317  NTAICTAVLR  4288
             NT IC   LR
Sbjct  499   NT-ICPGALR  507


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7778  TNLP  7767
             TNLP
Sbjct  723   TNLP  726


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  618  LSLSF  604
            L LSF
Sbjct  80   LALSF  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 11/19 (57%)
 Frame = +1

Query  5731  LIDRLIERAEDSGNESEGE  5787
             LID           ESE E
Sbjct  113   LID-----------ESEEE  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2106  LLRLYQ  2123
             LL L+Q
Sbjct  175   LLQLFQ  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3462  DMLLI  3476
             D LLI
Sbjct  412   DILLI  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1124  FINFSY  1107
             F NF Y
Sbjct  462   FLNFFY  467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  612  EIKDTKEALDK  644
            E K  KE  DK
Sbjct  665  ETKKAKESEDK  675


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8648  LPKKT  8662
             LPK T
Sbjct  678   LPKRT  682


>ref|NP_443170.1|  Fc receptor-like protein 1 isoform 1 precursor [Homo sapiens]
 sp|Q96LA6.1|FCRL1_HUMAN  RecName: Full=Fc receptor-like protein 1; Short=FcR-like protein 
1; Short=FcRL1; AltName: Full=Fc receptor homolog 1; Short=FcRH1; 
AltName: Full=IFGP family protein 1; Short=hIFGP1; 
AltName: Full=Immune receptor translocation-associated protein 
5; Flags: Precursor
Length=429

 GENE ID: 115350 FCRL1 | Fc receptor-like 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 18/43 (41%)
 Frame = +2

Query  3527  ELQAIYLALQDSGLE-VNIVT-DSQYALGIIQA---QPDQSES  3640
             +LQ IY        E VN+V  D  Y L    A   QP+Q ES
Sbjct  364   QLQPIY--------ENVNVVSGDEVYSL----AYYNQPEQ-ES  393


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8647  TPKEDKISL  8673
             T  EDK+SL
Sbjct  401   THMEDKVSL  409


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8537  LLLLLC  8520
             LLLL C
Sbjct  5     LLLLIC  10


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 6/25 (24%)
 Frame = +2

Query  4451  YYRDSR--NPLWKGPAKL----LWK  4507
             ++RD R   P W    KL    +WK
Sbjct  54    FFRDTRALGPGWSSSPKLQIAAMWK  78


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6053  MWKND  6067
             MWK D
Sbjct  76    MWKED  80


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  3155  YARMRGAHTNDV  3190
             Y R+R A   DV
Sbjct  412   YSRLRKANITDV  423


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  369  LPRLIL  352
            LPRL L
Sbjct  2    LPRLLL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6398  RIPLDRPV  6375
             RIP  RP+
Sbjct  202   RIPVSRPI  209


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3971  THLEGKV  3991
             TH+E KV
Sbjct  401   THMEDKV  407


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7684  VIVNFSVP  7661
             V  NF VP
Sbjct  290   VTLNFTVP  297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -2

Query  5466  TL-FTIAIGTSSFRLTS  5419
             TL FT+  G  S  LTS
Sbjct  291   TLNFTVPTGARSNHLTS  307


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5903  WKEAT  5917
             WKE T
Sbjct  77    WKEDT  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8784  LVLACS  8767
             LVL CS
Sbjct  130   LVLICS  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  7384  GTGQTIIVWY  7413
             GTG     WY
Sbjct  139   GTGDITFLWY  148


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8140  GSPQIL  8157
             GSP IL
Sbjct  234   GSPPIL  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5880  VTHNFSV  5860
             VT NF V
Sbjct  290   VTLNFTV  296


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  8939  SGVLQELLTSSL  8974
             SGV + LL S L
Sbjct  307   SGVIEGLL-STL  317


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3098  LAPASVFLL  3072
             L PA V LL
Sbjct  317   LGPATVALL  325


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  576  TVATLYC  596
            TVA L+C
Sbjct  321  TVALLFC  327


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  1700  NSPTRRELQ  1726
             NSPT  +LQ
Sbjct  358   NSPTPGQLQ  366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8205  LACSMP  8222
             L C MP
Sbjct  36    LTCKMP  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8382  PTVRE  8396
             P VRE
Sbjct  171   PSVRE  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8272  LYYFY  8258
             LY FY
Sbjct  239   LYWFY  243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 10/24 (41%)
 Frame = -3

Query  1088  CHPSYLFLKGTSSSCYVTSPWFSH  1017
             C P  LFL        + SP  SH
Sbjct  14    CEPAELFL--------IASP--SH  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -2

Query  8874  SPGHPSHAGSQGVT  8833
             SP HP   GS  VT
Sbjct  24    SPSHPT-EGSP-VT  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8736  LALVCS  8719
             L L+CS
Sbjct  130   LVLICS  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  8896  NLHSNT--SL  8873
             NL+S T  SL
Sbjct  155   NLQSKTQRSL  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6607  VREIDRSNYY  6578
             VRE D   YY
Sbjct  173   VRESDAEQYY  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 4/18 (22%)
 Frame = +2

Query  1757  EA----GADRQGTVSFNF  1798
             EA    GA R   V  NF
Sbjct  277   EANNGLGAQRSEAVTLNF  294


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5234  QHIYE  5248
             Q IYE
Sbjct  366   QPIYE  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3348  LTNSHSG  3328
             LT  HSG
Sbjct  266   LTEEHSG  272


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1335  LKALGPA  1355
             L  LGPA
Sbjct  314   LSTLGPA  320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  821  LLFYY  807
            LLF Y
Sbjct  324  LLFCY  328


>gb|AAK91824.1|  MHC class II antigen [Homo sapiens]
Length=261

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  230   KMLSGIGGFV  239


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  183   GDWTFQI  189


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  238   FVLGLIF  244


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VTPQ   RPV
Sbjct  82    VTPQG--RPV  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = +3

Query  1656  YKGRPGNFLQSRPEPT  1703
             Y G     LQ R EPT
Sbjct  119   YRG----ILQRRVEPT  130


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  133   ISPSRTEAL  141


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  83    TPQGRP  88


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  186   TFQILVMLE  194


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5695  YRKILRQRKID  5727
             YR IL QR ++
Sbjct  119   YRGIL-QRRVE  128


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  112   RHNYE  116


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  151   VTDFY---PA  157


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7012  HPPMQN  7029
             HP +QN
Sbjct  209   HPSLQN  214


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  231   MLSGIG  236


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  79    YRAVTPQG  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  125   RRVEP  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  164  FRNDQ  168


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  209  HPSLQ  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  154   FYPAQIKVRW  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  164   FRNDQ  168


>ref|NP_001152870.1|  Fc receptor-like protein 1 isoform 3 precursor [Homo sapiens]
Length=428

 GENE ID: 115350 FCRL1 | Fc receptor-like 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 18/43 (41%)
 Frame = +2

Query  3527  ELQAIYLALQDSGLE-VNIVT-DSQYALGIIQA---QPDQSES  3640
             +LQ IY        E VN+V  D  Y L    A   QP+Q ES
Sbjct  364   QLQPIY--------ENVNVVSGDEVYSL----AYYNQPEQ-ES  393


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8647  TPKEDKISL  8673
             T  EDK+SL
Sbjct  400   THMEDKVSL  408


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8537  LLLLLC  8520
             LLLL C
Sbjct  5     LLLLIC  10


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 6/25 (24%)
 Frame = +2

Query  4451  YYRDSR--NPLWKGPAKL----LWK  4507
             ++RD R   P W    KL    +WK
Sbjct  54    FFRDTRALGPGWSSSPKLQIAAMWK  78


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6053  MWKND  6067
             MWK D
Sbjct  76    MWKED  80


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  3155  YARMRGAHTNDV  3190
             Y R+R A   DV
Sbjct  411   YSRLRKANITDV  422


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  369  LPRLIL  352
            LPRL L
Sbjct  2    LPRLLL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6398  RIPLDRPV  6375
             RIP  RP+
Sbjct  202   RIPVSRPI  209


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3971  THLEGKV  3991
             TH+E KV
Sbjct  400   THMEDKV  406


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7684  VIVNFSVP  7661
             V  NF VP
Sbjct  290   VTLNFTVP  297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -2

Query  5466  TL-FTIAIGTSSFRLTS  5419
             TL FT+  G  S  LTS
Sbjct  291   TLNFTVPTGARSNHLTS  307


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5903  WKEAT  5917
             WKE T
Sbjct  77    WKEDT  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8784  LVLACS  8767
             LVL CS
Sbjct  130   LVLICS  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  7384  GTGQTIIVWY  7413
             GTG     WY
Sbjct  139   GTGDITFLWY  148


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8140  GSPQIL  8157
             GSP IL
Sbjct  234   GSPPIL  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5880  VTHNFSV  5860
             VT NF V
Sbjct  290   VTLNFTV  296


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  8939  SGVLQELLTSSL  8974
             SGV + LL S L
Sbjct  307   SGVIEGLL-STL  317


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3098  LAPASVFLL  3072
             L PA V LL
Sbjct  317   LGPATVALL  325


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  576  TVATLYC  596
            TVA L+C
Sbjct  321  TVALLFC  327


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  1700  NSPTRRELQ  1726
             NSPT  +LQ
Sbjct  358   NSPTPGQLQ  366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8205  LACSMP  8222
             L C MP
Sbjct  36    LTCKMP  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8382  PTVRE  8396
             P VRE
Sbjct  171   PSVRE  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8272  LYYFY  8258
             LY FY
Sbjct  239   LYWFY  243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 10/24 (41%)
 Frame = -3

Query  1088  CHPSYLFLKGTSSSCYVTSPWFSH  1017
             C P  LFL        + SP  SH
Sbjct  14    CEPAELFL--------IASP--SH  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -2

Query  8874  SPGHPSHAGSQGVT  8833
             SP HP   GS  VT
Sbjct  24    SPSHPT-EGSP-VT  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8736  LALVCS  8719
             L L+CS
Sbjct  130   LVLICS  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  8896  NLHSNT--SL  8873
             NL+S T  SL
Sbjct  155   NLQSKTQRSL  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6607  VREIDRSNYY  6578
             VRE D   YY
Sbjct  173   VRESDAEQYY  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 4/18 (22%)
 Frame = +2

Query  1757  EA----GADRQGTVSFNF  1798
             EA    GA R   V  NF
Sbjct  277   EANNGLGAQRSEAVTLNF  294


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5234  QHIYE  5248
             Q IYE
Sbjct  366   QPIYE  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3348  LTNSHSG  3328
             LT  HSG
Sbjct  266   LTEEHSG  272


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1335  LKALGPA  1355
             L  LGPA
Sbjct  314   LSTLGPA  320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  821  LLFYY  807
            LLF Y
Sbjct  324  LLFCY  328


>gb|AAC41963.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  119   VTDFY---PA  125


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  561  RSLYN  575
            RS YN
Sbjct  29   RSIYN  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  233  ERAPLVS  213
            ER  LVS
Sbjct  22   ERVRLVS  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  58    AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  58  AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  122   FYPAQIKVRW  131


>gb|AAC41966.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4465  QKSTLERT  4488
             QK  LERT
Sbjct  64    QKEVLERT  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  119   VTDFY---PA  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7012  HPPMQN  7029
             HP +QN
Sbjct  177   HPSLQN  182


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             + EVLE
Sbjct  64    QKEVLE  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7544  AVDPLG  7527
             AV PLG
Sbjct  49    AVTPLG  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  122   FYPAQIKVRW  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41965.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4465  QKSTLERT  4488
             QK  LERT
Sbjct  64    QKEVLERT  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  119   VTDFY---PA  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7012  HPPMQN  7029
             HP +QN
Sbjct  177   HPSLQN  182


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             + EVLE
Sbjct  64    QKEVLE  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7544  AVDPLG  7527
             AV PLG
Sbjct  49    AVTPLG  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  122   FYPAQIKVRW  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41972.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4465  QKSTLERT  4488
             QK  LERT
Sbjct  64    QKDILERT  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q  N ML  +GG
Sbjct  190  AQSESA--Q--NKMLSGIGG  205


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +3

Query  8610  FLKEKGGLEGLIHSQRRQ  8663
             FL    GL GLI  QR Q
Sbjct  212   FL----GL-GLIIRQRSQ  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  6357  VTPQSLHRP  6383
             VTPQ   RP
Sbjct  50    VTPQG--RP  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4719  HSDVY  4705
             H DVY
Sbjct  167   HGDVY  171


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1552  LQFLAVC  1532
             LQF A C
Sbjct  9     LQFKAMC  15


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  58    AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  58  AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41967.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  119   VTDFY---PA  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7012  HPPMQN  7029
             HP +QN
Sbjct  177   HPSLQN  182


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  58    AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  58  AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7544  AVDPLG  7527
             AV PLG
Sbjct  49    AVTPLG  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  122   FYPAQIKVRW  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41964.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4465  QKSTLERT  4488
             QK  LERT
Sbjct  64    QKEVLERT  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  119   VTDFY---PA  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4719  HSDVY  4705
             H DVY
Sbjct  167   HGDVY  171


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7012  HPPMQN  7029
             HP +QN
Sbjct  177   HPSLQN  182


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             + EVLE
Sbjct  64    QKEVLE  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  5534  DSDEELIRTV  5563
             DSD E  R V
Sbjct  41    DSDVEVYRAV  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7544  AVDPLG  7527
             AV PLG
Sbjct  49    AVTPLG  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  122   FYPAQIKVRW  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAY33463.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +3

Query  8715  QNYTPGPGVRYPLTFG  8762
             Q+Y       YPLTFG
Sbjct  90    QDYS------YPLTFG  99


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWY Q
Sbjct  34    NWYQQ  38


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  74    TISSLQPEDFATYYCL  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7621  ISGTD  7635
             +SGTD
Sbjct  66    VSGTD  70


>gb|AAY33476.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +3

Query  8715  QNYTPGPGVRYPLTFG  8762
             Q+Y       YPLTFG
Sbjct  90    QDYS------YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  74    TISSLQPEDFATYYCL  89


>gb|AAY33387.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +3

Query  8715  QNYTPGPGVRYPLTFG  8762
             Q+Y       YPLTFG
Sbjct  92    QDYS------YPLTFG  101


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  756  QMVHQAISPRTLNAWV  803
            QM +   SP TL A V
Sbjct  3    QMTQ---SPSTLSASV  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3542  KLLVTQSSDL  3513
             KLL+   S+L
Sbjct  47    KLLISKASNL  56


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  76    TISSLQPEDFATYYCL  91


>ref|NP_000206.2|  tyrosine-protein kinase JAK3 [Homo sapiens]
 sp|P52333.2|JAK3_HUMAN  RecName: Full=Tyrosine-protein kinase JAK3; AltName: Full=Janus 
kinase 3; Short=JAK-3; AltName: Full=Leukocyte janus kinase; 
Short=L-JAK
Length=1124

 GENE ID: 3718 JAK3 | Janus kinase 3 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  6736  FSYCNK-CSP  6710
             F YC+K CSP
Sbjct  1021  FTYCDKSCSP  1030


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             LELLEE
Sbjct  1051  LELLEE  1056


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 9/22 (40%)
 Frame = -1

Query  961  ASSLM--VSF-------NICMA  923
            A SLM  VS+        +CMA
Sbjct  572  AASLMSQVSYRHLVLLHGVCMA  593


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  287  VAAPRLL  267
            VA PRLL
Sbjct  363  VAPPRLL  369


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 12/24 (50%), Positives = 14/24 (58%), Gaps = 6/24 (25%)
 Frame = +3

Query  828   SPEVIPMFSALSEGATPQDLNTML  899
             SP+  P FSAL     PQ L+ ML
Sbjct  1081  SPQDRPSFSALG----PQ-LD-ML  1098


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 4/18 (22%)
 Frame = -2

Query  8934  ALGPRDEML--G--GCQT  8893
             ALGP  +ML  G  GC+T
Sbjct  1090  ALGPQLDMLWSGSRGCET  1107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -1

Query  9166  SFIEA*AVGSLVSQ  9125
             SF EA    SL SQ
Sbjct  568   SFLEA---ASLMSQ  578


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -2

Query  81   SFIEA*AVGSLVSQ  40
            SF EA    SL SQ
Sbjct  568  SFLEA---ASLMSQ  578


 Score = 19.3 bits (38),  Expect(2) =  4160
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7548  WGFGVAL  7568
             W FGV L
Sbjct  1011  WSFGVVL  1017


 Score = 15.9 bits (30),  Expect(2) =  4160
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +1

Query  7390  GQTIIVWYSAAAE  7428
             GQ  I WY  A E
Sbjct  987   GQSPIFWY--APE  997


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6677  TRKRIR  6694
             TR RIR
Sbjct  209   TRRRIR  214


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8779  YQLSQ  8793
             YQLSQ
Sbjct  506   YQLSQ  510


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = +2

Query  8081  LRDL---LLIVTRIVELLGRR  8134
             LRDL   L  VTR      RR
Sbjct  198   LRDLIQGLSFVTR------RR  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1675  FPGLP  1661
             FPGLP
Sbjct  332   FPGLP  336


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +2

Query  2084  TLNFPISPIETVPVKLKPG  2140
             TL+F I        KLK G
Sbjct  381   TLDFAIN-------KLKTG  392


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = +3

Query  3924  CM--DK*TVVQEYGN*IVH  3974
             CM  D  T VQE+    VH
Sbjct  591   CMAGDS-TMVQEF----VH  604


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1462  MVAEFV  1445
             MV EFV
Sbjct  598   MVQEFV  603


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  8946  TPDAALGPRD  8917
             TP  AL PRD
Sbjct  792   TP-GALAPRD  800


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  5361  QR-RARNGASR  5390
             QR RAR  ASR
Sbjct  915   QRHRARLDASR  925


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  918   DVPPLC  901
             DVP LC
Sbjct  1043  DVPALC  1048


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = +2

Query  3380  LEK-EPIVGAETFYV  3421
             LE  +P   AETF V
Sbjct  242   LERLDPAGAAETFHV  256


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8822  EHQLVT  8839
             EH LVT
Sbjct  314   EHRLVT  319


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8152  ILVES  8166
             ILVES
Sbjct  955   ILVES  959


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4137  KLLPL  4123
             KLLPL
Sbjct  972   KLLPL  976


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8065  LQLPPLERL  8091
             L LP LE L
Sbjct  129   LDLPVLEHL  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -2

Query  6831  PNCSL-NLLAIC  6799
             P  SL  LLA C
Sbjct  446   PHSSLRELLATC  457


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7548  WGFG  7559
             WGFG
Sbjct  709   WGFG  712


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3082  TEAGA  3096
             TEAGA
Sbjct  21    TEAGA  25


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6536  STQLLL  6553
             STQ LL
Sbjct  94    STQVLL  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8960  AVLEVLRM  8937
             AVL+  RM
Sbjct  166   AVLDLARM  173


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  240  GLGLL  254
            GLGLL
Sbjct  267  GLGLL  271


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9007  GGVAW  9021
             GG+AW
Sbjct  277   GGIAW  281


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 1/12 (8%)
 Frame = -2

Query  3594  CESVTMFTSNPE  3559
             CE    FT  PE
Sbjct  1105  CETHA-FTAHPE  1115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 7/16 (43%)
 Frame = -3

Query  3068  SLLMGHNT----LHVL  3033
             SLL    T    LHVL
Sbjct  17    SLL---STEAGALHVL  29


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8303  RRIR  8314
             RRIR
Sbjct  211   RRIR  214


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 14/28 (50%)
 Frame = +1

Query  5365  GEQE-MEP-------VD------PRLEP  5406
             GEQE ++P       VD      PR  P
Sbjct  284   GEQEVLQPFCDFPEIVDISIKQAPRVGP  311


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8963  TSSLLQ  8980
             TSSL Q
Sbjct  496   TSSLVQ  501


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6777  ALLMLQC  6757
             ALL  QC
Sbjct  753   ALLIQQC  759


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5080  LGKGGF  5063
             LGKG F
Sbjct  828   LGKGNF  833


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  226  ALSTQDSAC  252
            AL T+D  C
Sbjct  72   ALATEDLSC  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5461  FYNSNWY  5441
             FY  NW+
Sbjct  104   FYFPNWF  110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3629  DLVVLE  3612
             DL VLE
Sbjct  130   DLPVLE  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1146  LIPGLS  1129
             LI GLS
Sbjct  201   LIQGLS  206


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6859  ILRRGP  6876
             +LRR P
Sbjct  400   VLRRSP  405


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8081  LRDLL  8095
             LR+LL
Sbjct  450   LRELL  454


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3097  RPMDISNL  3120
             RP + SNL
Sbjct  478   RPKEKSNL  485


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5023  CRDPT  5009
             C DPT
Sbjct  811   CQDPT  815


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2201  EICTEME  2221
             +IC  ME
Sbjct  932   QICKGME  938


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2930  LCKLL  2944
             LC LL
Sbjct  1047  LCRLL  1051


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2868  CMSLTV  2851
             C+SL V
Sbjct  162   CLSLAV  167


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3831  GEQWLVILT  3857
             GE+ LV  T
Sbjct  313   GEHRLVTVT  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = +1

Query  3388  RTHSRSRNLL--CRW  3426
             R HS  R LL  C W
Sbjct  445   RPHSSLRELLATC-W  458


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5542  VAVSASSC  5519
             VAV   SC
Sbjct  467   VAVTLTSC  474


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  350  RSRTHLSPSS  321
            R R HL P S
Sbjct  613  RKRGHLVPAS  622


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  6508  LYCADIC  6488
             LY   IC
Sbjct  928   LYSSQIC  934


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5452  YCKKCC  5469
             YC K C
Sbjct  1023  YCDKSC  1028


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  9039  RALR  9050
             RALR
Sbjct  219   RALR  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  8511  WLEAQEEEEV  8540
             W   Q E+EV
Sbjct  281   W--TQGEQEV  288


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             E EVL+
Sbjct  285   EQEVLQ  290


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5031  PSIVEI  5014
             P IV+I
Sbjct  296   PEIVDI  301


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4149  VAPVKLL  4129
             VAP  LL
Sbjct  363   VAPPRLL  369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7156  VAITTISC  7133
             VA+T  SC
Sbjct  467   VAVTLTSC  474


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7127  LLTRDG  7144
             LL R+G
Sbjct  654   LLAREG  659


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3353  PPLVKL  3370
             PP +KL
Sbjct  664   PPFIKL  669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2450  PLDEDF  2467
             PLD D+
Sbjct  975   PLDKDY  980


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1139  QDYPSF  1122
             QD PSF
Sbjct  1083  QDRPSF  1088


>sp|P60509.1|ERB1_HUMAN  RecName: Full=HERV-R(b)_3p24.3 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein; AltName: Full=HERV-R(b) 
Env protein; Includes: RecName: Full=Surface protein domain; 
Short=SU; Includes: RecName: Full=Transmembrane protein 
domain; Short=TM; Flags: Precursor
Length=514


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 12/24 (50%)
 Frame = -3

Query  4625  YLPH------------NHHLPSVF  4590
             YLPH            N HLP +F
Sbjct  309   YLPHVVNQGTRAIVHRNDHLPTIF  332


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6080  MHEDI  6094
             MHEDI
Sbjct  373   MHEDI  377


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2704  LYFCSM  2687
             LYFC M
Sbjct  470   LYFCRM  475


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6921  TVIQH  6935
             TVIQH
Sbjct  340   TVIQH  344


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5338  CRHPIL  5321
             CRH IL
Sbjct  239   CRHTIL  244


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7056  FCHMF  7042
             FC MF
Sbjct  472   FCRMF  476


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  8308  SSRYVANSSTS  8276
             S  +V N STS
Sbjct  52    SAPFVVNASTS  62


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3215  FALPLL  3198
             FA PLL
Sbjct  164   FAIPLL  169


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8359  DHLPPI  8342
             DHLP I
Sbjct  326   DHLPTI  331


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  2441  FSVPLDE--DFRKYTAFTIP  2494
             FSV  +E  D  K  AF IP
Sbjct  152   FSV--NETRD--KVIAFAIP  167


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3903  HLSQLA  3886
             HLSQ A
Sbjct  205   HLSQIA  210


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1930  WFPSSW  1913
             W PS W
Sbjct  280   WLPSGW  285


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/35 (34%), Positives = 12/35 (34%), Gaps = 19/35 (54%)
 Frame = +3

Query  5901  CGRKQPPLYFVHQMLKHMIQRYIMFGPHMPVYPQT  6005
             CG     LYF          R  MF  H    PQT
Sbjct  468   CG-----LYFC---------R--MFSQHI---PQT  483


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6437  NQPGHN  6420
             N+PGH+
Sbjct  144   NEPGHD  149


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7425  CCCTIPDN  7402
             CC  IP+N
Sbjct  402   CCVYIPNN  409


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +1

Query  7810  VYKIIHNDSR  7839
             VY  I N+SR
Sbjct  404   VY--IPNNSR  411


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9088  TQYR  9077
             TQYR
Sbjct  183   TQYR  186


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  8189  LKNS--AVSLLNA  8221
             L +S   +SL+NA
Sbjct  356   LNDSLQSISLMNA  368


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  263  CALQQAESCV  234
            CAL   E CV
Sbjct  395  CALIKTECCV  404


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1103  PSRRN  1117
             P RRN
Sbjct  11    PARRN  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2779  KEWRFF  2762
             K+W FF
Sbjct  106   KDWVFF  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1945  NWRFYQS  1965
             +W F+QS
Sbjct  107   DWVFFQS  113


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4628  VYLPHN  4611
             VY P N
Sbjct  404   VYIPNN  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7630  FQRFI  7616
             FQ FI
Sbjct  111   FQSFI  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1520  WQRRAHS  1540
             W+ R HS
Sbjct  214   WEQRNHS  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2083  ATNLSQQ  2063
             AT+ SQQ
Sbjct  252   ATDWSQQ  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7363  RSLND  7377
             R LND
Sbjct  354   RALND  358


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1572  CWKCG  1586
             CW CG
Sbjct  82    CWVCG  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2112  SIGLM  2098
             SI LM
Sbjct  362   SISLM  366


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6845  IIFKQ  6859
             IIF Q
Sbjct  486   IIFQQ  490


>sp|Q15046.3|SYK_HUMAN  RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA 
ligase; Short=LysRS
Length=597

 GENE ID: 3735 KARS | lysyl-tRNA synthetase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  5261  YPHKFH  5244
             YPHKFH
Sbjct  95    YPHKFH  100


 Score = 23.5 bits (48),  Expect =   302
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 5/25 (20%)
 Frame = -1

Query  9118  PRLRSGLT-RETQYRQKAAAYMQDL  9047
             P L  GL   ET YRQ    Y+ DL
Sbjct  214   PHLHFGLKDKETRYRQR---YL-DL  234


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5829  MVPHLH  5812
             M PHLH
Sbjct  212   MLPHLH  217


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  814  KRRLSAQK  837
            KRRL A+K
Sbjct  24   KRRLKAEK  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6843  VLLFP  6829
             VLLFP
Sbjct  567   VLLFP  571


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  2174  TEEKIKALVEIC  2209
             TEE  K L +IC
Sbjct  416   TEETRKILDDIC  427


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +2

Query  4079  LKLAGRWPVKTIH  4117
             LK AGR     IH
Sbjct  126   LKVAGR-----IH  133


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8883  TLLSP  8869
             TLLSP
Sbjct  204   TLLSP  208


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 12/31 (38%)
 Frame = +1

Query  5692  EYRKIL------------RQRKIDRLIDRLI  5748
             E RKIL              R   RL D L+
Sbjct  418   ETRKILDDICVAKAVECPPPRTTARLLDKLV  448


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  459  LAPCLPIL  436
            L PCL  L
Sbjct  206  LSPCLHML  213


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  691  QLTQDTA  711
            QL Q TA
Sbjct  47   QLSQATA  53


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  123  HTTD  112
            HTTD
Sbjct  58   HTTD  61


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4708  DITMK  4722
             DIT+K
Sbjct  123   DITLK  127


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6235  FYLSFLHYH  6209
             FY+ +  YH
Sbjct  340   FYMAYADYH  348


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  1982  ILIEICGHKAI  2014
             IL +IC  KA+
Sbjct  422   ILDDICVAKAV  432


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  1537  QPEIAGPLGK  1566
             +P+I  PL K
Sbjct  465   HPQIMSPLAK  474


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4740  LFLDEGF  4720
             +F DE F
Sbjct  527   MFIDENF  533


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = +3

Query  1422  LAE-AMSQVTNSAT  1460
             L E  +SQ T  AT
Sbjct  43    LSEKQLSQATAAAT  56


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7021  MQNKTNYK  7044
             M N  NYK
Sbjct  157   MANSRNYK  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7830  IMNNFI  7813
             I+N+F+
Sbjct  235   ILNDFV  240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5537  SDEELI  5554
             S+EE I
Sbjct  165   SEEEFI  170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  2809  FIRMEFITHPK  2777
             F+R  FI   K
Sbjct  239   FVRQKFIIRSK  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3740  DKLV  3751
             DKLV
Sbjct  445   DKLV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1060  VLVVPAM  1040
             VL  PAM
Sbjct  567   VLLFPAM  573


>ref|NP_001093256.1|  intercellular adhesion molecule 2 precursor [Homo sapiens]
 ref|NP_000864.2|  intercellular adhesion molecule 2 precursor [Homo sapiens]
 ref|NP_001093257.1|  intercellular adhesion molecule 2 precursor [Homo sapiens]
 15 more sequence titles
 ref|NP_001093258.1|  intercellular adhesion molecule 2 precursor [Homo sapiens]
 ref|NP_001093259.1|  intercellular adhesion molecule 2 precursor [Homo sapiens]
 sp|P13598.2|ICAM2_HUMAN  RecName: Full=Intercellular adhesion molecule 2; Short=ICAM-2; 
AltName: CD_antigen=CD102; Flags: Precursor
Length=275

 GENE ID: 3384 ICAM2 | intercellular adhesion molecule 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -3

Query  6086  HASVLPCHFSTC  6051
             H  VL CHF TC
Sbjct  85    HDTVLQCHF-TC  95


 Score = 22.3 bits (45),  Expect =   731
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 22/48 (45%)
 Frame = -1

Query  7579  NE------FSRATPNPQE--LLIL*VSFHS----QD-----SCLELLD  7487
             NE      F  A P PQE         F S    +D     SCL  LD
Sbjct  153   NETLHYETFGKAAPAPQEAT-----ATFNSTADREDGHRNFSCLAVLD  195


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -3

Query  1535  VPFFATIETLNNLSL  1491
             VP   T+E L+ L L
Sbjct  136   VP---TVEPLDSLTL  147


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  5389  LLAPFLALLCRVTPILLC  5336
             LL  F      VT +LLC
Sbjct  234   LLSLF------VTSVLLC  245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4752  VLLNLF  4735
             VLL LF
Sbjct  233   VLLSLF  238


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8077  PLERLTL  8097
             PL+ LTL
Sbjct  141   PLDSLTL  147


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3242  ILLCF  3228
             +LLCF
Sbjct  242   VLLCF  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7137  EMVVIAT  7157
             +MV+I T
Sbjct  223   QMVIIVT  229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7955  CRVP  7944
             CRVP
Sbjct  134   CRVP  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6641  SVEINC  6658
             S E+NC
Sbjct  43    SLEVNC  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2084  CNQSE  2070
             CNQ E
Sbjct  52    CNQPE  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +2

Query  6005  PNPQEVVLVNVTENFN  6052
             P PQE      T  FN
Sbjct  166   PAPQE-----ATATFN  176


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7446  IALSKLFCC  7420
             +AL  L CC
Sbjct  11    VALFTLICC  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4457  CNKPE  4443
             CN PE
Sbjct  52    CNQPE  56


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7116  IFDEHL  7099
             IF +HL
Sbjct  247   IFGQHL  252


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1047  LLCHF  1033
             L CHF
Sbjct  89    LQCHF  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  256  FSKPSPASRE  227
            F K  PA  E
Sbjct  161  FGKAAPAPQE  170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8183  QELKNSAVS  8209
             QE  NS VS
Sbjct  99    QESMNSNVS  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1507  LTIFL  1493
             LT FL
Sbjct  145   LTLFL  149


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6861  PQEGT  6875
             PQE T
Sbjct  168   PQEAT  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7014  VIVSLPSVL  6988
             +IV   SVL
Sbjct  226   IIVTVVSVL  234


>pdb|1I85|C  Chain C, Crystal Structure Of The Ctla-4B7-2 Complex
 pdb|1I85|D  Chain D, Crystal Structure Of The Ctla-4B7-2 Complex
Length=126


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 10/34 (29%)
 Frame = +3

Query  1401  PGHKA---RV--LAEAMSQVTN--SATIMMQRGN  1481
             PG KA   RV  L +A SQVT    AT MM  GN
Sbjct  28    PG-KATEVRVTVLRQADSQVTEVCAATYMM--GN  58


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4272  EIRLNILRQ  4298
             E+R  +LRQ
Sbjct  33    EVRVTVLRQ  41


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7070  MYAPP  7084
             MY PP
Sbjct  99    MYPPP  103


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2866  YVID  2855
             YVID
Sbjct  115   YVID  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7333  VLGSSR  7350
             VL SSR
Sbjct  11    VLASSR  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  431  TYSMG  445
            TY MG
Sbjct  53   TYMMG  57


>sp|Q9BUI4.1|RPC3_HUMAN  RecName: Full=DNA-directed RNA polymerase III subunit RPC3; Short=RNA 
polymerase III subunit C3; AltName: Full=DNA-directed 
RNA polymerase III subunit C; AltName: Full=RNA polymerase 
III 62 kDa subunit; Short=RPC62
Length=534

 GENE ID: 10623 POLR3C | polymerase (RNA) III (DNA directed) polypeptide C
(62kD) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 9/11 (81%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = -2

Query  6585  ITTSSSARLPF  6553
             ITTSSSA  PF
Sbjct  276   ITTSSSA--PF  284


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6542  QLLLNGSL  6565
             +LLLNG L
Sbjct  109   ELLLNGKL  116


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1365  EEMMTA  1382
             EEM TA
Sbjct  488   EEMITA  493


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  3036  YMECIMTHQ  3062
             Y EC M  Q
Sbjct  526   YIECTMKRQ  534


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4138  HRCY  4149
             HRCY
Sbjct  437   HRCY  440


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +2

Query  1874  TGADDTVL---EEM  1906
             TGA++  L   EEM
Sbjct  477   TGAEEAQLQEIEEM  490


 Score = 17.2 bits (33),  Expect(2) =  9702
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  5833  EHGAPSPPP  5807
             E   P PPP
Sbjct  167   ENSDPGPPP  175


 Score = 16.8 bits (32),  Expect(2) =  9702
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  174   PPPAP  178


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  7151  SNNESEIFR  7177
             S NE  IFR
Sbjct  289   SSNE--IFR  295


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 12/25 (48%)
 Frame = +1

Query  2287  EKRQY*ME-KISRFQRT**ENSRLL  2358
             E RQ+  E K         EN RLL
Sbjct  448   ERRQF--ETK---------ENKRLL  461


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1073  NRMD  1084
             NRMD
Sbjct  257   NRMD  260


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5366  PLSSN  5352
             PLSSN
Sbjct  287   PLSSN  291


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5737  DRLIERAED  5763
             DRL E  ED
Sbjct  127   DRLTETMED  135


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5269  CPSIP  5255
             CPS+P
Sbjct  160   CPSVP  164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1405  PGPPTP  1388
             PGPP P
Sbjct  171   PGPPPP  176


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             E EEM
Sbjct  486   EIEEM  490


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1149  YLIPGLS  1129
             YL+P LS
Sbjct  188   YLVPKLS  194


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8455  KNMEQSQV  8478
             K  EQ QV
Sbjct  373   KHIEQKQV  380


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6227  EIKNCS  6244
             EIK CS
Sbjct  5     EIKLCS  10


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3626  DQSESELV  3649
             DQ  SE V
Sbjct  260   DQTSSEIV  267


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5522  GRSGDS  5539
             G SGDS
Sbjct  324   GKSGDS  329


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7524  LSTARIL  7504
             LS AR L
Sbjct  429   LSAARML  435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  7089  VDKLDVHQI  7115
             V+KLD  +I
Sbjct  506   VNKLDASEI  514


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7089  VDKLDVHQI  7115
             V+K  VH I
Sbjct  21    VEKIGVHLI  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4552  YFYVTIILY  4526
             Y Y T  LY
Sbjct  91    YIYTTKTLY  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4702  FIDITMK  4722
             +I+ TMK
Sbjct  526   YIECTMK  532


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5301  CCRILIM  5281
             C R+L M
Sbjct  79    CSRVLRM  85


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6568  RRRGSN  6585
             RRR S+
Sbjct  201   RRRSSD  206


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5450  AIVKSVA  5470
             AIV  VA
Sbjct  250   AIVSAVA  256


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1099  GGLFVI  1082
             GG++VI
Sbjct  331   GGMYVI  336


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8873  ERSVRVE  8893
             E S RVE
Sbjct  462   EKSQRVE  468


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6815  LREQFG  6832
             L E+FG
Sbjct  13    LQEHFG  18


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5856  VLQK  5867
             VLQK
Sbjct  369   VLQK  372


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8213  LNATAIAVAE  8242
             L+A  I V E
Sbjct  509   LDASEIQVDE  518


>sp|Q08493.2|PDE4C_HUMAN  RecName: Full=cAMP-specific 3',5'-cyclic phosphodiesterase 4C; 
AltName: Full=DPDE1; AltName: Full=PDE21
Length=712

 GENE ID: 5143 PDE4C | phosphodiesterase 4C, cAMP-specific [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  2517  GLDISTMC  2540
             GLDIS MC
Sbjct  579   GLDISPMC  586


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  3705  QHTKELEEMNK  3737
             Q  KELE+ NK
Sbjct  319   QLAKELEDTNK  329


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  476  SWPVRNIRR  502
            SWPV   RR
Sbjct  73   SWPVSSCRR  81


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8646  HSQRRQDIL  8672
             HSQRR+  L
Sbjct  113   HSQRRESFL  121


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  8517  EAQEEEE  8537
             EA+EE+E
Sbjct  664   EAEEEDE  670


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +1

Query  5758  EDSGNESEGEISAL  5799
             ED   E EGE  AL
Sbjct  668   EDEEEEEEGEETAL  681


 Score = 18.5 bits (36),  Expect(2) =  3189
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = -3

Query  3065  LLM--GH--------NTLH  3039
             LLM  GH        N LH
Sbjct  374   LLMLEGHYHANVAYHNSLH  392


 Score = 17.6 bits (34),  Expect(2) =  3189
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3157  IFSCFQ  3140
             IFS FQ
Sbjct  350   IFSIFQ  355


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 7/20 (35%)
 Frame = -2

Query  1287  SSNFLPPV-----KLARLLE  1243
             SSN LPP      KLA  LE
Sbjct  191   SSNQLPPAEDTGQKLA--LE  208


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6680  RKRIRIQ  6700
             R  IRIQ
Sbjct  37    RRPIRIQ  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  900  LAWCLN  883
            L WCL+
Sbjct  213  LDWCLD  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4781  YQSSIP  4764
             YQS IP
Sbjct  634   YQSKIP  639


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2362  FPEVLSSL  2339
             F +VL SL
Sbjct  155   FAQVLASL  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7960  GPVGSP  7943
             GPVG P
Sbjct  184   GPVGNP  189


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  882  DLNTMLNT  905
            DL TM  T
Sbjct  510  DLKTMVET  517


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8514  LEAQEEEE  8537
             LE  EEE+
Sbjct  662   LEEAEEED  669


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  406  PGLNRI  389
            PGL RI
Sbjct  101  PGLGRI  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  921  LDVPPLC  901
            LD+ P+C
Sbjct  580  LDISPMC  586


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  2809  FIRMEFITHP  2780
             FI  ++I HP
Sbjct  600   FI--DYIAHP  607


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  8802  EEANKGENTSL  8834
             EE   GE T L
Sbjct  671   EEEEEGEETAL  681


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3771  TFLIPA  3754
             TF IPA
Sbjct  362   TFQIPA  367


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6527  PVVSTQLLLN  6556
             P VS Q L N
Sbjct  433   PGVSNQFLIN  442


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4613  NHHL  4602
             NHHL
Sbjct  459   NHHL  462


 Score = 16.3 bits (31),  Expect(2) = 26242
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  134  LEIPQTLLVSVE  169
            LE P T L S E
Sbjct  686  LELPDTELLSPE  697


 Score = 15.1 bits (28),  Expect(2) = 26242
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  187  PEQGPE  204
            PE GP+
Sbjct  696  PEAGPD  701


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/27 (29%), Positives = 10/27 (37%), Gaps = 14/27 (51%)
 Frame = +1

Query  943  RPSMRK--------------LQNGIEC  981
            RP +RK              L+NG  C
Sbjct  64   RPELRKSRLSWPVSSCRRFDLENGLSC  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5162  LELLEEL  5182
             LE L+EL
Sbjct  207   LETLDEL  213


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8208  LTALFFS  8188
             LTA  FS
Sbjct  346   LTAIIFS  352


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6747  IFPIF  6733
             IF IF
Sbjct  350   IFSIF  354


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  5487  TNLAMKATLFTIAI  5446
             T+L   A LF  AI
Sbjct  414   TDLEILAALFASAI  427


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2641  LIDNY  2627
             L DNY
Sbjct  527   LLDNY  531


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  696  DTGHS-NQVSQ  725
            +T  S NQVS+
Sbjct  250  ETSRSGNQVSE  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  7356  LWAQPQ*R*RYRP  7394
             LW QP  R   RP
Sbjct  32    LWRQP--R---RP  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1442  SNKF  1453
             SNKF
Sbjct  234   SNKF  237


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4274  DQAEHL  4291
             DQ E+L
Sbjct  315   DQEEQL  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2244  IFEIF  2230
             IF IF
Sbjct  350   IFSIF  354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2331  NLIRELKT  2354
             NL  +LKT
Sbjct  506   NLLADLKT  513


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  627  KEALD  641
            KEAL+
Sbjct  683  KEALE  687


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3451  RKSR  3462
             RKSR
Sbjct  68    RKSR  71


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3314  ANTLST  3297
             A+TL T
Sbjct  367   ADTLAT  372


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  6232  YLSFL--HYH  6209
             YL  L  HYH
Sbjct  373   YLLMLEGHYH  382


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1161  MYSPTSILD  1187
             MY   S+L+
Sbjct  450   MYNDASVLE  458


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6128  HMALGF  6111
             H+A GF
Sbjct  461   HLAVGF  466


>ref|NP_002103.2|  histidine decarboxylase [Homo sapiens]
Length=662

 GENE ID: 3067 HDC | histidine decarboxylase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
 Frame = -3

Query  275  RLLPCALQQAESCVERAPLVSL  210
            RL   A  QA S VE A L+SL
Sbjct  184  RLVAYASDQAHSSVEKAGLISL  205


 Score = 19.3 bits (38),  Expect(2) =  1087
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  9145  VGSLVSQ-RAPR  9113
             VG L+SQ R  R
Sbjct  487   VGNLISQIRGAR  498


 Score = 18.9 bits (37),  Expect(2) =  1087
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9089  DPVQA  9075
             DPVQA
Sbjct  515   DPVQA  519


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = +3

Query  5955  IQRYIMFG------PHMPVY  5996
             I+R IM G      PHM  Y
Sbjct  61    IERIIMPGVVHWQSPHMHAY  80


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  6651  LIVQDPTTIQEK  6686
             LI   P TIQ+K
Sbjct  435   LI---PATIQDK  443


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8598  LQLPC  8584
             LQLPC
Sbjct  651   LQLPC  655


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3474  IEEDK  3488
             IEEDK
Sbjct  228   IEEDK  232


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  4557  QEEKQRSL  4580
             +E+KQR L
Sbjct  229   EEDKQRGL  236


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  518  QYLST  504
            QYLST
Sbjct  20   QYLST  24


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8385  TVRER  8399
             TVRER
Sbjct  24    TVRER  28


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8835  TSWCSLL  8815
             TSW SLL
Sbjct  85    TSWPSLL  91


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  522  VPVFV  508
            VPVFV
Sbjct  237  VPVFV  241


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -2

Query  60   VGSLVSQ-RAPR  28
            VG L+SQ R  R
Sbjct  487  VGNLISQIRGAR  498


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7527  YLSTAR  7510
             YLST R
Sbjct  21    YLSTVR  26


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  4361  HCTPQ-SP  4341
             HCT Q SP
Sbjct  478   HCTSQPSP  485


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2207  CTEME  2221
             CTE+E
Sbjct  112   CTELE  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6788  NTLKQIA  6808
             N LK+IA
Sbjct  422   NVLKEIA  428


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  7681  LHKLNTLLN  7707
             LH L TLL+
Sbjct  540   LH-LETLLD  547


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5777  VKEKY  5791
             VK+KY
Sbjct  318   VKDKY  322


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7484  GIKQLQA  7504
             G+K LQA
Sbjct  370   GVKNLQA  376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1089  LSSILF  1072
             LSS LF
Sbjct  565   LSSFLF  570


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  4000  YQDNFSF  3980
             Y D F F
Sbjct  295   YADSFTF  301


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4631  PVYLPH  4614
             P+YL H
Sbjct  332   PIYLRH  337


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6472  IERLI  6458
             IER I
Sbjct  61    IERII  65


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  997  PACT  986
            PACT
Sbjct  110  PACT  113


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3994  DNFS  3983
             DNFS
Sbjct  215   DNFS  218


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2060  NLLTQI  2077
             NL  QI
Sbjct  489   NLISQI  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3908  LKGEAMH  3928
             L GEA++
Sbjct  219   LRGEALQ  225


>pdb|1I8L|C  Chain C, Human B7-1CTLA-4 Co-Stimulatory Complex
 pdb|1I8L|D  Chain D, Human B7-1CTLA-4 Co-Stimulatory Complex
Length=126


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 18/34 (52%), Positives = 19/34 (55%), Gaps = 10/34 (29%)
 Frame = +3

Query  1401  PGHKA---RV--LAEAMSQVTN--SATIMMQRGN  1481
             PG KA   RV  L +A SQVT    AT MM  GN
Sbjct  28    PG-KATEVRVTVLRQADSQVTEVCAATYMM--GN  58


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4272  EIRLNILRQ  4298
             E+R  +LRQ
Sbjct  33    EVRVTVLRQ  41


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7070  MYAPP  7084
             MY PP
Sbjct  99    MYPPP  103


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2866  YVID  2855
             YVID
Sbjct  115   YVID  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7333  VLGSSR  7350
             VL SSR
Sbjct  11    VLASSR  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  431  TYSMG  445
            TY MG
Sbjct  53   TYMMG  57


>ref|NP_036472.2|  nuclear factor of activated T-cells, cytoplasmic 2 isoform B 
[Homo sapiens]
Length=921

 GENE ID: 4773 NFATC2 | nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -1

Query  9040  RHSPVPPRP  9014
             RHSPV PRP
Sbjct  234   RHSPV-PRP  241


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  7158  MSPRSSDLEEE  7190
             MSPR S L E+
Sbjct  220   MSPRTS-LAED  229


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8953  RTADIEL  8973
             R ADIEL
Sbjct  522   RNADIEL  528


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  8856  HAGSQGVTSWCSLL  8815
             HAGSQG  S   LL
Sbjct  787   HAGSQGQSS--ALL  798


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = -1

Query  8992  AESP------L*QARCQQF  8954
             AESP      +  A CQQF
Sbjct  715   AESPSCLVATM--APCQQF  731


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNP  V YQ
Sbjct  745   QNPAAVLYQ  753


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6441  AKPAGA  6424
             AKPAGA
Sbjct  101   AKPAGA  106


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  2037  VGPTNTVPIALCPQ  1996
             V P N  P  LCPQ
Sbjct  191   VSPNNGGPDDLCPQ  204


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             PSP PS +V
Sbjct  275   PSPQPSSHV  283


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/37 (29%), Positives = 12/37 (32%), Gaps = 24/37 (64%)
 Frame = -2

Query  4368  SPALYPP---------------------IPPFLLKLW  4321
             SPA YPP                     IPP   K+W
Sbjct  290   SPAGYPPVAGSAVIMDALNSLATDSPCGIPP---KMW  323


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  495  MFLTGQD  475
            M LTGQ+
Sbjct  596  MILTGQN  602


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5017  DPTLLC  5000
             DPTL C
Sbjct  690   DPTLIC  695


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  403  QGERKN  420
            QGER N
Sbjct  357  QGERRN  362


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8071  LPPLE  8085
             LPPLE
Sbjct  394   LPPLE  398


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6909  GNFSTVIQH  6935
             G + TVIQ+
Sbjct  858   GSYPTVIQQ  866


 Score = 18.0 bits (35),  Expect(2) =  7982
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -3

Query  9068  SCLYAGSEG--SPLPSPA  9021
             SCL     G  SP P PA
Sbjct  230   SCL-----GRHSPVPRPA  242


 Score = 15.9 bits (30),  Expect(2) =  7982
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  9000  SPQR  8989
             SPQR
Sbjct  268   SPQR  271


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  484  RPGLTANRSSS  452
            RP   A RSSS
Sbjct  240  RP---ASRSSS  247


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6787  IPFCSTNVT  6761
             IP CS  VT
Sbjct  383   IPICSIPVT  391


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4207  IVGNSK  4190
             IVGN K
Sbjct  492   IVGNTK  497


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4167  QQAALTVAPVKL  4132
             QQ AL  AP  L
Sbjct  766   QQPALMAAPLSL  777


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7412  IVQQQN  7429
             ++QQQN
Sbjct  863   VIQQQN  868


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4981  GVNIKQD  5001
             GV IKQ+
Sbjct  891   GVTIKQE  897


 Score = 17.2 bits (33),  Expect(2) = 11586
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1083  SILFVP  1066
             SIL VP
Sbjct  367   SILLVP  372


 Score = 15.9 bits (30),  Expect(2) = 11586
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  974  IPFCS  960
            IP CS
Sbjct  383  IPICS  387


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 11/32 (34%)
 Frame = -1

Query  298  RTHQSP---P---LA--SCRARFSK-PSPASR  230
            RT  SP   P   LA  SC  R S  P PASR
Sbjct  215  RT--SPIMSPRTSLAEDSCLGRHSPVPRPASR  244


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  540  QTGSEELR  563
            Q GS ELR
Sbjct  404  QSGSYELR  411


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1582  VERKDT  1599
             VER DT
Sbjct  580   VERQDT  585


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +3

Query  7140  MVV------IATMSP  7166
             MV       +ATM P
Sbjct  713   MVAESPSCLVATMAP  727


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4797  PNML  4786
             PNML
Sbjct  635   PNML  638


 Score = 16.8 bits (32),  Expect(2) = 19779
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  224  PLVSLS  207
            PL SLS
Sbjct  74   PLASLS  79


 Score = 15.1 bits (28),  Expect(2) = 19779
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  296  YSPVA  282
            YSP A
Sbjct  72   YSPLA  76


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  6091  ILM-HLFYHV  6065
             IL  H FY+V
Sbjct  467   ILKPHAFYQV  476


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2428  HIQYC  2414
             HI YC
Sbjct  830   HIMYC  834


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5355  TRQRRARNG  5381
             T QR A NG
Sbjct  870   TSQRAAKNG  878


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4890  LADQLI--HL  4913
             L D+LI  HL
Sbjct  905   LDDELIDTHL  914


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  606  RIEI  617
            RIEI
Sbjct  112  RIEI  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7513  QDSCL  7499
             +DSCL
Sbjct  228   EDSCL  232


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  381   PAIPI  385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3254  PKFKLPI  3274
             P F LP+
Sbjct  149   PRFTLPV  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5107  GTSPRRPR  5130
             G SP R R
Sbjct  266   GASPQRSR  273


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6703  SLDTDS  6686
             SL TDS
Sbjct  309   SLATDS  314


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3726  PPIPLC  3709
             P IP C
Sbjct  381   PAIPIC  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4894  ASSGS  4880
             ASSGS
Sbjct  170   ASSGS  174


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6715  SPWSSLDTDS  6686
             SP  SL  DS
Sbjct  221   SPRTSLAEDS  230


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5114  APEDQG  5131
             AP+D+G
Sbjct  284   APQDHG  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  9041  SPLPSPAQATP  9009
             SP PSP  A P
Sbjct  326   SPDPSPVSAAP  336


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -2

Query  4635  SSCLL---AT--QSSPAI  4597
             SS LL    T  Q SP I
Sbjct  794   SSALLHPSPTNQQASPVI  811


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1405  PGPP  1394
             PGPP
Sbjct  844   PGPP  847


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4813  SPVCRP  4796
             SPV RP
Sbjct  236   SPVPRP  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8675  IKDILSSL  8652
             I D L SL
Sbjct  303   IMDALNSL  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  7247  PLGVAPTKA  7273
             P   AP KA
Sbjct  331   PVSAAPSKA  339


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1970  QYDQILI  1990
             +YD  LI
Sbjct  688   EYDPTLI  694


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2732  GLTTPD  2749
             GL  PD
Sbjct  734   GLSSPD  739


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  583  ATVLY  569
            A VLY
Sbjct  748  AAVLY  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7094  QIRCSS  7111
             Q RC S
Sbjct  819   QLRCGS  824


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4371  LSPALYP  4351
             LSP  YP
Sbjct  855   LSPGSYP  861


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6666  PTTIQE  6683
             PT IQ+
Sbjct  861   PTVIQQ  866


>ref|NP_775114.1|  nuclear factor of activated T-cells, cytoplasmic 2 isoform C 
[Homo sapiens]
Length=925

 GENE ID: 4773 NFATC2 | nuclear factor of activated T-cells, cytoplasmic,
calcineurin-dependent 2 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -1

Query  9040  RHSPVPPRP  9014
             RHSPV PRP
Sbjct  234   RHSPV-PRP  241


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  7158  MSPRSSDLEEE  7190
             MSPR S L E+
Sbjct  220   MSPRTS-LAED  229


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8953  RTADIEL  8973
             R ADIEL
Sbjct  522   RNADIEL  528


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  8856  HAGSQGVTSWCSLL  8815
             HAGSQG  S   LL
Sbjct  787   HAGSQGQSS--ALL  798


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = -1

Query  8992  AESP------L*QARCQQF  8954
             AESP      +  A CQQF
Sbjct  715   AESPSCLVATM--APCQQF  731


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNP  V YQ
Sbjct  745   QNPAAVLYQ  753


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6441  AKPAGA  6424
             AKPAGA
Sbjct  101   AKPAGA  106


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  2037  VGPTNTVPIALCPQ  1996
             V P N  P  LCPQ
Sbjct  191   VSPNNGGPDDLCPQ  204


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             PSP PS +V
Sbjct  275   PSPQPSSHV  283


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/37 (29%), Positives = 12/37 (32%), Gaps = 24/37 (64%)
 Frame = -2

Query  4368  SPALYPP---------------------IPPFLLKLW  4321
             SPA YPP                     IPP   K+W
Sbjct  290   SPAGYPPVAGSAVIMDALNSLATDSPCGIPP---KMW  323


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  495  MFLTGQD  475
            M LTGQ+
Sbjct  596  MILTGQN  602


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5017  DPTLLC  5000
             DPTL C
Sbjct  690   DPTLIC  695


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  403  QGERKN  420
            QGER N
Sbjct  357  QGERRN  362


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8071  LPPLE  8085
             LPPLE
Sbjct  394   LPPLE  398


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6909  GNFSTVIQH  6935
             G + TVIQ+
Sbjct  858   GSYPTVIQQ  866


 Score = 18.0 bits (35),  Expect(2) =  7970
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -3

Query  9068  SCLYAGSEG--SPLPSPA  9021
             SCL     G  SP P PA
Sbjct  230   SCL-----GRHSPVPRPA  242


 Score = 15.9 bits (30),  Expect(2) =  7970
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  9000  SPQR  8989
             SPQR
Sbjct  268   SPQR  271


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  484  RPGLTANRSSS  452
            RP   A RSSS
Sbjct  240  RP---ASRSSS  247


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6787  IPFCSTNVT  6761
             IP CS  VT
Sbjct  383   IPICSIPVT  391


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4207  IVGNSK  4190
             IVGN K
Sbjct  492   IVGNTK  497


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4167  QQAALTVAPVKL  4132
             QQ AL  AP  L
Sbjct  766   QQPALMAAPLSL  777


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7412  IVQQQN  7429
             ++QQQN
Sbjct  863   VIQQQN  868


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4981  GVNIKQD  5001
             GV IKQ+
Sbjct  891   GVTIKQE  897


 Score = 17.2 bits (33),  Expect(2) = 11567
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1083  SILFVP  1066
             SIL VP
Sbjct  367   SILLVP  372


 Score = 15.9 bits (30),  Expect(2) = 11567
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  974  IPFCS  960
            IP CS
Sbjct  383  IPICS  387


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 11/32 (34%)
 Frame = -1

Query  298  RTHQSP---P---LA--SCRARFSK-PSPASR  230
            RT  SP   P   LA  SC  R S  P PASR
Sbjct  215  RT--SPIMSPRTSLAEDSCLGRHSPVPRPASR  244


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  540  QTGSEELR  563
            Q GS ELR
Sbjct  404  QSGSYELR  411


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1582  VERKDT  1599
             VER DT
Sbjct  580   VERQDT  585


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +3

Query  7140  MVV------IATMSP  7166
             MV       +ATM P
Sbjct  713   MVAESPSCLVATMAP  727


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4797  PNML  4786
             PNML
Sbjct  635   PNML  638


 Score = 16.8 bits (32),  Expect(2) = 19744
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  224  PLVSLS  207
            PL SLS
Sbjct  74   PLASLS  79


 Score = 15.1 bits (28),  Expect(2) = 19744
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  296  YSPVA  282
            YSP A
Sbjct  72   YSPLA  76


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  6091  ILM-HLFYHV  6065
             IL  H FY+V
Sbjct  467   ILKPHAFYQV  476


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2428  HIQYC  2414
             HI YC
Sbjct  830   HIMYC  834


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5355  TRQRRARNG  5381
             T QR A NG
Sbjct  870   TSQRAAKNG  878


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  606  RIEI  617
            RIEI
Sbjct  112  RIEI  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7513  QDSCL  7499
             +DSCL
Sbjct  228   EDSCL  232


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  381   PAIPI  385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3254  PKFKLPI  3274
             P F LP+
Sbjct  149   PRFTLPV  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5107  GTSPRRPR  5130
             G SP R R
Sbjct  266   GASPQRSR  273


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6703  SLDTDS  6686
             SL TDS
Sbjct  309   SLATDS  314


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3726  PPIPLC  3709
             P IP C
Sbjct  381   PAIPIC  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2806  IRMEF  2792
             IR EF
Sbjct  912   IRKEF  916


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4894  ASSGS  4880
             ASSGS
Sbjct  170   ASSGS  174


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6715  SPWSSLDTDS  6686
             SP  SL  DS
Sbjct  221   SPRTSLAEDS  230


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5114  APEDQG  5131
             AP+D+G
Sbjct  284   APQDHG  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  9041  SPLPSPAQATP  9009
             SP PSP  A P
Sbjct  326   SPDPSPVSAAP  336


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -2

Query  4635  SSCLL---AT--QSSPAI  4597
             SS LL    T  Q SP I
Sbjct  794   SSALLHPSPTNQQASPVI  811


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1405  PGPP  1394
             PGPP
Sbjct  844   PGPP  847


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1408  IRQEF  1422
             IR EF
Sbjct  912   IRKEF  916


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4813  SPVCRP  4796
             SPV RP
Sbjct  236   SPVPRP  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8675  IKDILSSL  8652
             I D L SL
Sbjct  303   IMDALNSL  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  7247  PLGVAPTKA  7273
             P   AP KA
Sbjct  331   PVSAAPSKA  339


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1970  QYDQILI  1990
             +YD  LI
Sbjct  688   EYDPTLI  694


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2732  GLTTPD  2749
             GL  PD
Sbjct  734   GLSSPD  739


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  583  ATVLY  569
            A VLY
Sbjct  748  AAVLY  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7094  QIRCSS  7111
             Q RC S
Sbjct  819   QLRCGS  824


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4371  LSPALYP  4351
             LSP  YP
Sbjct  855   LSPGSYP  861


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6666  PTTIQE  6683
             PT IQ+
Sbjct  861   PTVIQQ  866


>gb|AAC41968.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 25.2 bits (52),  Expect =    93
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  GIGGF+
Sbjct  198   KMLSGIGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2415  VTDFFFFNPA  2386
             VTDF+   PA
Sbjct  119   VTDFY---PA  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7012  HPPMQN  7029
             HP +QN
Sbjct  177   HPSLQN  182


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML G+G
Sbjct  199   MLSGIG  204


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  58    AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  58  AEYWNSQKD  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7544  AVDPLG  7527
             AV PLG
Sbjct  49    AVTPLG  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  7114  YYRAAINKRW  7143
             +Y A I  RW
Sbjct  122   FYPAQIKVRW  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAY33454.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect(2) =   103
 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 13/34 (38%)
 Frame = +2

Query  7007  TITLPCRIKQII----NMW--QKVGKA----MYA  7078
             TIT  CR  Q I    N W  QK GKA     YA
Sbjct  20    TIT--CRASQTISSYLN-WYQQKPGKAPELLIYA  50


 Score = 18.0 bits (35),  Expect(2) =   103
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 9/20 (45%)
 Frame = -2

Query  6144  SGVNFTHGFRL*SHKLIISS  6085
             SG++FT         L ISS
Sbjct  67    SGIDFT---------LTISS  77


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWY Q
Sbjct  34    NWYQQ  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5877  SQSIMGYL  5900
             SQ I  YL
Sbjct  26    SQTISSYL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2017  YSISRTY  2037
             YS  RT+
Sbjct  92    YSTPRTF  98


>ref|NP_001059.2|  DNA topoisomerase 2-beta [Homo sapiens]
Length=1621

 GENE ID: 7155 TOP2B | topoisomerase (DNA) II beta 180kDa [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   110
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  2212  RDGKGRE  2232
             RD KGRE
Sbjct  1161  RDAKGRE  1167


 Score = 20.6 bits (41),  Expect(2) =   110
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  2165  WPLTEEKIKALV  2200
             W LT EK+  L+
Sbjct  1147  WSLTKEKVEELI  1158


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6212  IMEKGEIKN  6238
             IME  EI N
Sbjct  517   IMENAEINN  525


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +1

Query  8155  LVESPTVLESGTKE  8196
             L+E PT  +S TKE
Sbjct  383   LIENPT-FDSQTKE  395


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +2

Query  7148  NSNNESEI------FRPG  7183
             NS+NE  I      F PG
Sbjct  724   NSDNERSIPSLVDGFKPG  741


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  2662  YIQIIH-VLID  2633
             YI II  VLI+
Sbjct  857   YIPIIPMVLIN  867


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  8511  WLEAQE---EEE  8537
             W EAQE   EE+
Sbjct  1106  WKEAQEKAAEED  1117


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 12/37 (32%)
 Frame = +2

Query  7037  IINMW----------QKVGKAMYAPP-ISGQIRCSSN  7114
             II  W          +KV K  Y P  I GQ   SSN
Sbjct  131   IISIWNNGKGIPVVEHKVEK-VYVPALIFGQLLTSSN  166


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4187  EFGIP  4201
             EFGIP
Sbjct  1522  EFGIP  1526


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6089  DIISLWD  6109
             +IIS W+
Sbjct  130   NIISIWN  136


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1212  FRDYVD  1229
             FR YVD
Sbjct  283   FRSYVD  288


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3010  KQRDSK  3027
             KQRD K
Sbjct  1159  KQRDAK  1164


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  1300  REKKE  1304


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  412  FPPGLNRIF  386
            F PGL  IF
Sbjct  93   FVPGLYKIF  101


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
 Frame = +2

Query  4253  KIIG-QVR---DQAEHLKT  4297
             KI+G Q     D AE LKT
Sbjct  528   KIVGLQYKKSYDDAESLKT  546


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1274  KKLDDR  1291
             KK DDR
Sbjct  672   KKIDDR  677


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5764  SGNESEGE  5787
             SG E EG+
Sbjct  1545  SGSENEGD  1552


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +3

Query  7695  YTP*LKNRKTSK  7730
             Y P    RKTSK
Sbjct  1553  YNP---GRKTSK  1561


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8321  LERILL  8338
             LE ILL
Sbjct  56    LEHILL  61


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/17 (41%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +2

Query  3647  VNQIIEQLI----KKEK  3685
             V+Q++  LI    KK K
Sbjct  346   VDQVVGKLIEVVKKKNK  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  5979  AQT-L---CTSVSY  5950
             AQT L   C SV Y
Sbjct  435   AQTQLNKKCSSVKY  448


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1331  YFKSIGTS  1354
             Y+K  GTS
Sbjct  628   YYKGLGTS  635


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4587  MENRWQ  4604
             ME+R Q
Sbjct  685   MEDRRQ  690


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 1/11 (9%)
 Frame = -3

Query  1226  YIVSKGFLWSL  1194
             YI     LWSL
Sbjct  1140  YILNMS-LWSL  1149


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/14 (35%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
 Frame = +2

Query  6050  NMWKNDM---VEQM  6082
             ++WK D+   VE++
Sbjct  1178  DLWKEDLAAFVEEL  1191


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2393  LKKKK  2407
             LKKKK
Sbjct  1253  LKKKK  1257


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  8517  EAQEEEE-VGF  8546
             E  EEE+ V F
Sbjct  1607  ESDEEEDDVDF  1617


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8954  ELLTSS  8971
             +LLTSS
Sbjct  160   QLLTSS  165


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8863  MTRR  8874
             MTRR
Sbjct  255   MTRR  258


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  3227  ESIVIWGKTPKFK  3265
             ESI  W    KFK
Sbjct  425   ESILNWV---KFK  434


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 13/26 (50%)
 Frame = +2

Query  6731  GKIGNMRQA-HCNISRAKWNNTLKQI  6805
             GKI N R+A H            KQI
Sbjct  504   GKILNVREASH------------KQI  517


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4647  WKSLVKH  4667
             W SL KH
Sbjct  577   WPSLLKH  583


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +1

Query  3682  KGLSGMGTST  3711
             KGL   GTST
Sbjct  630   KGL---GTST  636


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8365  LFDHL  8351
             LFDH+
Sbjct  1018  LFDHM  1022


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6446  ESQNQPGHNN  6417
             E QNQ  H++
Sbjct  1118  ETQNQ--HDD  1125


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4113  YILTM  4127
             YIL M
Sbjct  1140  YILNM  1144


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  526  YNHPFRQ  546
            Y H F Q
Sbjct  202  YKHSFKQ  208


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  169  KSLAV  183
            KSLAV
Sbjct  482  KSLAV  486


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4113  YILTM  4127
             YI TM
Sbjct  821   YIFTM  825


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5276  PLLPKY  5259
             P+LP Y
Sbjct  903   PMLPNY  908


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  801  VKVVEEK  821
            VK  EEK
Sbjct  986  VKMTEEK  992


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +2

Query  2156  VKQWPLTEEK  2185
             VK   +TEEK
Sbjct  986   VK---MTEEK  992


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6134  ILHMAL  6117
             IL M L
Sbjct  1141  ILNMSL  1146


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3659  IEQLIK  3676
             +E+LIK
Sbjct  1154  VEELIK  1159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  3782  DGIDKAQDE  3808
             DG DK  DE
Sbjct  1409  DGLDK--DE  1415


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5808  GGGDGA  5825
             GGG+GA
Sbjct  14    GGGNGA  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6056  WKNDM  6070
             W N+M
Sbjct  210   WMNNM  214


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5581  EKLDE  5567
             +KLDE
Sbjct  293   DKLDE  297


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1429  SAKTLA  1412
             SAK LA
Sbjct  480   SAKSLA  485


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7880  IVNRVR  7897
             IVN VR
Sbjct  888   IVNNVR  893


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3842  PLLSNY  3825
             P+L NY
Sbjct  903   PMLPNY  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3949  WTTVY  3935
             WT VY
Sbjct  947   WTQVY  951


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8517  EAQEEEEV  8540
             E QE E+V
Sbjct  1195  ESQEREDV  1202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             PS+PI
Sbjct  1288  PSVPI  1292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2125  KIKARNGW  2148
             K+K RN W
Sbjct  1323  KVKKRNPW  1330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7148  NSNNESE  7168
             NS+ +SE
Sbjct  1516  NSDSDSE  1522


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8612  KVAKIY  8595
             KV K+Y
Sbjct  147   KVEKVY  152


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8111  IVELLGRR  8134
             IV L+ RR
Sbjct  251   IVALMTRR  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8873  LRVIH  8859
             L VIH
Sbjct  302   LKVIH  306


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2855  VNDIQKLVG  2881
             +N+I K VG
Sbjct  523   INNIIKIVG  531


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/41 (29%), Positives = 12/41 (29%), Gaps = 28/41 (68%)
 Frame = -1

Query  6898  KTVRY---------------------NF----WVPS*GLLK  6851
             KT RY                     NF    W PS  LLK
Sbjct  545   KTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNW-PS--LLK  582


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7109  SNITGLL  7129
             S I GLL
Sbjct  563   SHIKGLL  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7821  NFIYH  7807
             NFI H
Sbjct  571   NFIHH  575


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  3525  LSYKQFI  3545
             L Y  FI
Sbjct  709   LTYNDFI  715


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4395  SVAIMS  4378
             SVA MS
Sbjct  766   SVAEMS  771


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2429  PHPVL  2415
             PHP L
Sbjct  901   PHPML  905


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6923  CNSTQLFN  6946
             CNS  LF+
Sbjct  1013  CNSMVLFD  1020


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +3

Query  1668  PGNFLQSRPEPTAPP  1712
             P +F      PT PP
Sbjct  1582  PSDF------PTEPP  1590


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7547  GAVDPL  7530
             G V+PL
Sbjct  68    GSVEPL  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3271  HTKGNM  3288
             +TK NM
Sbjct  392   QTKENM  397


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6029  VNVTENF  6049
             VN  +NF
Sbjct  785   VNLAQNF  791


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6455  NNKTFNGT  6478
             N K F GT
Sbjct  907   NYKNFKGT  914


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5408  GSIQE  5422
             G IQE
Sbjct  913   GTIQE  917


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  630   EALDKI  647
             E LDK+
Sbjct  1189  EELDKV  1194


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3383  EKEPIV  3400
             E EP+V
Sbjct  1343  ETEPVV  1348


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3224  TESIVI  3241
             TE +VI
Sbjct  1344  TEPVVI  1349


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7443  LLRR  7454
             LLRR
Sbjct  1354  LLRR  1357


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7525  IPKGSTAP  7548
             IPK  T P
Sbjct  1525  IPKKTTTP  1532


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5305  QLLQNSYY  5282
             QLL  S Y
Sbjct  160   QLLTSSNY  167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8598  DLSHFLKEK  8624
             DLS F  EK
Sbjct  238   DLSKFKMEK  246


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4220  GVVES  4234
             G+VES
Sbjct  422   GIVES  426


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2130  NFTGTV  2113
             NF GT+
Sbjct  910   NFKGTI  915


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6442  RKTSRGT  6422
             RKTS  T
Sbjct  1557  RKTSKTT  1563


>ref|NP_001166936.1|  kinesin-like protein KIF21A isoform 4 [Homo sapiens]
Length=1621

 GENE ID: 55605 KIF21A | kinesin family member 21A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -3

Query  7937  LGGGSETIMV  7908
             LGG S+TIM+
Sbjct  336   LGGNSQTIMI  345


 Score = 21.0 bits (42),  Expect(2) =   563
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  7139  DGGNSNNESE  7168
             DGG S +ES+
Sbjct  612   DGGESSDESD  621


 Score = 18.0 bits (35),  Expect(2) =   563
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = +1

Query  7171  LQTWRRRYEGQLEK  7212
             LQT    YE   EK
Sbjct  658   LQTLKKQYE---EK  668


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 12/28 (42%)
 Frame = +2

Query  4229  ESMNKELKKIIGQVRDQA---EH---LK  4294
             + MNKEL         QA   EH   LK
Sbjct  713   QAMNKELQRL------QAAQKEHARLLK  734


 Score = 18.9 bits (37),  Expect(2) =  1087
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2699  IEELRQHLL  2725
             IE+LR  LL
Sbjct  486   IEDLRAKLL  494


 Score = 18.9 bits (37),  Expect(2) =  1087
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2754  NIRKNL  2771
             N RKNL
Sbjct  502   NLRKNL  507


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8867  PGERSVRVEV  8896
             P E SVRV V
Sbjct  5     PDESSVRVAV  14


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6060  FHMLK  6046
             FHMLK
Sbjct  1048  FHMLK  1052


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  428  KTYSMG  445
            KTY MG
Sbjct  94   KTYTMG  99


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3743  YLLVHFL  3723
             YLL HFL
Sbjct  1003  YLLDHFL  1009


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7679  NYTSLI  7696
             NYTSL+
Sbjct  1344  NYTSLV  1349


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8145  PSNIGGIS  8168
             PS IG IS
Sbjct  1182  PSKIGSIS  1189


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1985  VSDHTVLL  1962
             V DH VLL
Sbjct  1540  VPDHPVLL  1547


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2551  MERITSNI  2574
             ME  T NI
Sbjct  953   MESLTANI  960


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4812  LLYAD  4798
             LLYAD
Sbjct  1127  LLYAD  1131


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/27 (33%), Positives = 9/27 (33%), Gaps = 16/27 (59%)
 Frame = +1

Query  8935  CIR----------------STSRTADI  8967
             CIR                STSRT  I
Sbjct  1368  CIRTLTSSGQVTLGDACSASTSRTVAI  1394


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 16/43 (37%)
 Frame = +2

Query  6569  EEEVVIRSVN--FTDNAKTIIVQLNTSVEINCTRPNNNTRKRI  6691
             +EE V  S+N  F +NA      L T  E      NNN R RI
Sbjct  411   DEEGVE-SINDMFHENAM-----LQT--E------NNNLRVRI  439


 Score = 17.6 bits (34),  Expect(2) =  7742
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2399  KKKSV  2413
             KKKSV
Sbjct  555   KKKSV  559


 Score = 15.9 bits (30),  Expect(2) =  7742
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2284  KEKR  2295
             KEKR
Sbjct  551   KEKR  554


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1263  KLARLLE  1243
             KL RLL+
Sbjct  327   KLTRLLQ  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1449  NSATIM  1466
             NS TIM
Sbjct  339   NSQTIM  344


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8601  LSHFLKEKGGL  8633
             L H LKEK  L
Sbjct  1047  LFHMLKEKAEL  1057


 Score = 17.2 bits (33),  Expect(2) = 11029
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3635  ESELVNQIIEQLIK  3676
             ESE VN   E L K
Sbjct  495   ESEAVN---ENLRK  505


 Score = 15.5 bits (29),  Expect(2) = 11029
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +2

Query  3653  QII-------EQLIKKEK  3685
             +II       E L  KEK
Sbjct  536   EIIDLAKKDLEKLKRKEK  553


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2261  YNTPVFA  2281
             YN  VFA
Sbjct  80    YNATVFA  86


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -1

Query  8431  TLSA-------AGSARL  8402
             TL A       AGS RL
Sbjct  265   TLTAKFHFVDLAGSERL  281


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4426  YKNSKFSGLLQ  4458
             Y +SK   LLQ
Sbjct  323   YRDSKLTRLLQ  333


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1514  ETLNNL  1497
             ETLN L
Sbjct  357   ETLNTL  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5952  MIQRYI  5969
             MI+ YI
Sbjct  478   MIHSYI  483


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2282  WQILE  2268
             WQ LE
Sbjct  887   WQLLE  891


 Score = 16.3 bits (31),  Expect(2) = 18385
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7051  AESRKSNV  7074
             A S KSN+
Sbjct  168   AKSKKSNI  175


 Score = 15.1 bits (28),  Expect(2) = 18385
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7154  NNESE  7168
             N ESE
Sbjct  196   NTESE  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2004  CPQI  1993
             CPQI
Sbjct  240   CPQI  243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -1

Query  9136  LVSQ-RAPR----LRSGLTR  9092
             +V Q RA      LRS  TR
Sbjct  376   MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -2

Query  51   LVSQ-RAPR----LRSGLTR  7
            +V Q RA      LRS  TR
Sbjct  376  MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE +E +EV
Sbjct  586   LEVEESQEV  594


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  5193  LLDIFLGFGSM  5225
             LLD FL   SM
Sbjct  1004  LLDHFL---SM  1011


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  930   QMLKE  944
             +MLKE
Sbjct  1049  HMLKE  1053


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SPP SP
Sbjct  1235  SPPSSP  1240


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PS PPS
Sbjct  1237  PSSPPS  1242


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2865  MSLTV-QLSFSG  2833
             M LTV Q S SG
Sbjct  1443  MCLTVDQIS-SG  1453


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4268  VRDQAEH  4288
             V DQA H
Sbjct  457   VSDQANH  463


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3772  YFPDSST  3752
             YF  SST
Sbjct  516   YFSGSST  522


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  562  LSSSD  548
            LSSSD
Sbjct  816  LSSSD  820


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7606  SIPRHSS  7586
             SI R+SS
Sbjct  1187  SISRQSS  1193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4984  HLGLTMC  4964
             HLG  MC
Sbjct  1438  HLGPVMC  1444


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  593  IEGC  582
            IEGC
Sbjct  25   IEGC  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5525  RSGDSDEE  5548
             R G+ +EE
Sbjct  467   RAGEGNEE  474


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4278  RLNILRQQY  4304
             RL  L  QY
Sbjct  657   RLQTLKKQY  665


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5091  LTEDRWN  5111
             LTE R N
Sbjct  773   LTESRRN  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8618  RKGGTGR  8638
             RKG TGR
Sbjct  870   RKGLTGR  876


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2662  YIQIIHVLID  2633
             YIQ I  LI+
Sbjct  65    YIQCIEKLIE  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6472  IERLI  6458
             IE LI
Sbjct  69    IEKLI  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2173  DRRKNKSI  2196
             + RK KS+
Sbjct  552   EKRKKKSV  559


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7293  EKKEQ  7307
             EKKE+
Sbjct  571   EKKEE  575


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3626  DQSESE  3643
             D+S+SE
Sbjct  618   DESDSE  623


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8518  KHKRRRR  8538
             K K RRR
Sbjct  1114  KNKARRR  1120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  8665  ISLICGSTTH  8694
             I  IC   TH
Sbjct  1576  INAICVNSTH  1585


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5323  ELGVDIA  5343
             +LG DIA
Sbjct  1613  DLGEDIA  1619


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5967  CTSV  5956
             CTSV
Sbjct  31    CTSV  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7174  EDLGLI  7157
             E+LG I
Sbjct  109   EELGII  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5302  LLQNS  5288
             LLQ+S
Sbjct  331   LLQDS  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = +2

Query  7418  QQQNNLLRA-IEAQQ  7459
             Q +NN LR  I A Q
Sbjct  429   QTENNNLRVRIKAMQ  443


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9055  QDLRA  9041
             +DLRA
Sbjct  487   EDLRA  491


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  190  RAPLLE  173
            RA LLE
Sbjct  490  RAKLLE  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2157  TFGPSI  2140
             TF P I
Sbjct  522   TFSPTI  527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5940  MLKHMI  5957
             ML H I
Sbjct  671   MLQHKI  676


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4406  KELQ  4417
             KELQ
Sbjct  717   KELQ  720


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4329  LKEKGGL  4349
             LKEK  L
Sbjct  1051  LKEKAEL  1057


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  955   RKLQNG  972
             R LQ+G
Sbjct  1601  RNLQDG  1606


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8834  VTPCEP  8851
             VTP EP
Sbjct  34    VTPGEP  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  194  RDLKAKGK  217
            RD  AK K
Sbjct  164  RDIDAKSK  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7822  IHNDS  7836
             IH DS
Sbjct  177   IHEDS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  6700  ERTRESI  6720
             ER  E I
Sbjct  289   ERAKEGI  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  537  LQTGSEELR  563
            LQT    LR
Sbjct  428  LQTENNNLR  436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3115  NLSRA  3129
             NL RA
Sbjct  506   NLTRA  510


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4241  KELKK  4255
             K+LKK
Sbjct  741   KQLKK  745


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9035  LPSPA  9021
             LP PA
Sbjct  856   LPTPA  860


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3103  MDISNL  3120
             M ISN+
Sbjct  902   MTISNM  907


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6381  ACVMTE  6364
             AC +TE
Sbjct  995   ACTLTE  1000


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7645  HDLDGV  7662
             +DLD V
Sbjct  1070  QDLDSV  1075


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = +2

Query  6665  PNNNTRKR  6688
             P N  R R
Sbjct  1113  PKNKARRR  1120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7268  KAKRR  7282
             KA RR
Sbjct  1116  KARRR  1120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5116  PRRPR  5130
             P RPR
Sbjct  1241  PSRPR  1245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  194   CSGATAR  174
             CS  T R
Sbjct  1384  CSASTSR  1390


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8265  TSITLSVPS  8239
             TS T  +PS
Sbjct  1388  TSRTVAIPS  1396


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2320  RFQRT  2334
             RFQ T
Sbjct  1428  RFQST  1432


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  4708  DITMKALIQE  4737
             D T K L Q+
Sbjct  1516  DLTQKDLLQQ  1525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1104  PVGE  1115
             PVGE
Sbjct  1565  PVGE  1568


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             DL E+I
Sbjct  1613  DLGEDI  1618


>ref|NP_001166934.1|  kinesin-like protein KIF21A isoform 3 [Homo sapiens]
Length=1637

 GENE ID: 55605 KIF21A | kinesin family member 21A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -3

Query  7937  LGGGSETIMV  7908
             LGG S+TIM+
Sbjct  336   LGGNSQTIMI  345


 Score = 21.0 bits (42),  Expect(2) =   562
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  7139  DGGNSNNESE  7168
             DGG S +ES+
Sbjct  612   DGGESSDESD  621


 Score = 18.0 bits (35),  Expect(2) =   562
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = +1

Query  7171  LQTWRRRYEGQLEK  7212
             LQT    YE   EK
Sbjct  658   LQTLKKQYE---EK  668


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 12/28 (42%)
 Frame = +2

Query  4229  ESMNKELKKIIGQVRDQA---EH---LK  4294
             + MNKEL         QA   EH   LK
Sbjct  713   QAMNKELQRL------QAAQKEHARLLK  734


 Score = 18.9 bits (37),  Expect(2) =  1084
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2699  IEELRQHLL  2725
             IE+LR  LL
Sbjct  486   IEDLRAKLL  494


 Score = 18.9 bits (37),  Expect(2) =  1084
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2754  NIRKNL  2771
             N RKNL
Sbjct  502   NLRKNL  507


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8867  PGERSVRVEV  8896
             P E SVRV V
Sbjct  5     PDESSVRVAV  14


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6060  FHMLK  6046
             FHMLK
Sbjct  1071  FHMLK  1075


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  428  KTYSMG  445
            KTY MG
Sbjct  94   KTYTMG  99


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3743  YLLVHFL  3723
             YLL HFL
Sbjct  1026  YLLDHFL  1032


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7679  NYTSLI  7696
             NYTSL+
Sbjct  1360  NYTSLV  1365


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8145  PSNIGGIS  8168
             PS IG IS
Sbjct  1198  PSKIGSIS  1205


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1985  VSDHTVLL  1962
             V DH VLL
Sbjct  1556  VPDHPVLL  1563


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2551  MERITSNI  2574
             ME  T NI
Sbjct  976   MESLTANI  983


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4812  LLYAD  4798
             LLYAD
Sbjct  1143  LLYAD  1147


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/27 (33%), Positives = 9/27 (33%), Gaps = 16/27 (59%)
 Frame = +1

Query  8935  CIR----------------STSRTADI  8967
             CIR                STSRT  I
Sbjct  1384  CIRTLTSSGQVTLGDACSASTSRTVAI  1410


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 16/43 (37%)
 Frame = +2

Query  6569  EEEVVIRSVN--FTDNAKTIIVQLNTSVEINCTRPNNNTRKRI  6691
             +EE V  S+N  F +NA      L T  E      NNN R RI
Sbjct  411   DEEGVE-SINDMFHENAM-----LQT--E------NNNLRVRI  439


 Score = 17.6 bits (34),  Expect(2) =  7712
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2399  KKKSV  2413
             KKKSV
Sbjct  555   KKKSV  559


 Score = 15.9 bits (30),  Expect(2) =  7712
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2284  KEKR  2295
             KEKR
Sbjct  551   KEKR  554


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1263  KLARLLE  1243
             KL RLL+
Sbjct  327   KLTRLLQ  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1449  NSATIM  1466
             NS TIM
Sbjct  339   NSQTIM  344


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8601  LSHFLKEKGGL  8633
             L H LKEK  L
Sbjct  1070  LFHMLKEKAEL  1080


 Score = 17.2 bits (33),  Expect(2) = 10985
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3635  ESELVNQIIEQLIK  3676
             ESE VN   E L K
Sbjct  495   ESEAVN---ENLRK  505


 Score = 15.5 bits (29),  Expect(2) = 10985
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +2

Query  3653  QII-------EQLIKKEK  3685
             +II       E L  KEK
Sbjct  536   EIIDLAKKDLEKLKRKEK  553


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2261  YNTPVFA  2281
             YN  VFA
Sbjct  80    YNATVFA  86


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -1

Query  8431  TLSA-------AGSARL  8402
             TL A       AGS RL
Sbjct  265   TLTAKFHFVDLAGSERL  281


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4426  YKNSKFSGLLQ  4458
             Y +SK   LLQ
Sbjct  323   YRDSKLTRLLQ  333


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1514  ETLNNL  1497
             ETLN L
Sbjct  357   ETLNTL  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5952  MIQRYI  5969
             MI+ YI
Sbjct  478   MIHSYI  483


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2282  WQILE  2268
             WQ LE
Sbjct  910   WQLLE  914


 Score = 16.3 bits (31),  Expect(2) = 18296
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7051  AESRKSNV  7074
             A S KSN+
Sbjct  168   AKSKKSNI  175


 Score = 15.1 bits (28),  Expect(2) = 18296
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7154  NNESE  7168
             N ESE
Sbjct  196   NTESE  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2004  CPQI  1993
             CPQI
Sbjct  240   CPQI  243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -1

Query  9136  LVSQ-RAPR----LRSGLTR  9092
             +V Q RA      LRS  TR
Sbjct  376   MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -2

Query  51   LVSQ-RAPR----LRSGLTR  7
            +V Q RA      LRS  TR
Sbjct  376  MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE +E +EV
Sbjct  586   LEVEESQEV  594


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  5193  LLDIFLGFGSM  5225
             LLD FL   SM
Sbjct  1027  LLDHFL---SM  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  930   QMLKE  944
             +MLKE
Sbjct  1072  HMLKE  1076


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SPP SP
Sbjct  1251  SPPSSP  1256


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PS PPS
Sbjct  1253  PSSPPS  1258


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2865  MSLTV-QLSFSG  2833
             M LTV Q S SG
Sbjct  1459  MCLTVDQIS-SG  1469


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4268  VRDQAEH  4288
             V DQA H
Sbjct  457   VSDQANH  463


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3772  YFPDSST  3752
             YF  SST
Sbjct  516   YFSGSST  522


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  562  LSSSD  548
            LSSSD
Sbjct  839  LSSSD  843


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7606  SIPRHSS  7586
             SI R+SS
Sbjct  1203  SISRQSS  1209


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4984  HLGLTMC  4964
             HLG  MC
Sbjct  1454  HLGPVMC  1460


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  593  IEGC  582
            IEGC
Sbjct  25   IEGC  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5525  RSGDSDEE  5548
             R G+ +EE
Sbjct  467   RAGEGNEE  474


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4278  RLNILRQQY  4304
             RL  L  QY
Sbjct  657   RLQTLKKQY  665


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5091  LTEDRWN  5111
             LTE R N
Sbjct  773   LTESRRN  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8618  RKGGTGR  8638
             RKG TGR
Sbjct  893   RKGLTGR  899


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2662  YIQIIHVLID  2633
             YIQ I  LI+
Sbjct  65    YIQCIEKLIE  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6472  IERLI  6458
             IE LI
Sbjct  69    IEKLI  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2173  DRRKNKSI  2196
             + RK KS+
Sbjct  552   EKRKKKSV  559


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7293  EKKEQ  7307
             EKKE+
Sbjct  571   EKKEE  575


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3626  DQSESE  3643
             D+S+SE
Sbjct  618   DESDSE  623


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8518  KHKRRRR  8538
             K K RRR
Sbjct  1130  KNKARRR  1136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  8665  ISLICGSTTH  8694
             I  IC   TH
Sbjct  1592  INAICVNSTH  1601


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5323  ELGVDIA  5343
             +LG DIA
Sbjct  1629  DLGEDIA  1635


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5967  CTSV  5956
             CTSV
Sbjct  31    CTSV  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7174  EDLGLI  7157
             E+LG I
Sbjct  109   EELGII  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5302  LLQNS  5288
             LLQ+S
Sbjct  331   LLQDS  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = +2

Query  7418  QQQNNLLRA-IEAQQ  7459
             Q +NN LR  I A Q
Sbjct  429   QTENNNLRVRIKAMQ  443


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9055  QDLRA  9041
             +DLRA
Sbjct  487   EDLRA  491


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  190  RAPLLE  173
            RA LLE
Sbjct  490  RAKLLE  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2157  TFGPSI  2140
             TF P I
Sbjct  522   TFSPTI  527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5940  MLKHMI  5957
             ML H I
Sbjct  671   MLQHKI  676


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4406  KELQ  4417
             KELQ
Sbjct  717   KELQ  720


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6572  EEVVIR  6589
             +EVV R
Sbjct  806   QEVVLR  811


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4329  LKEKGGL  4349
             LKEK  L
Sbjct  1074  LKEKAEL  1080


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  955   RKLQNG  972
             R LQ+G
Sbjct  1617  RNLQDG  1622


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8834  VTPCEP  8851
             VTP EP
Sbjct  34    VTPGEP  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  194  RDLKAKGK  217
            RD  AK K
Sbjct  164  RDIDAKSK  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7822  IHNDS  7836
             IH DS
Sbjct  177   IHEDS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  6700  ERTRESI  6720
             ER  E I
Sbjct  289   ERAKEGI  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  537  LQTGSEELR  563
            LQT    LR
Sbjct  428  LQTENNNLR  436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3115  NLSRA  3129
             NL RA
Sbjct  506   NLTRA  510


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4241  KELKK  4255
             K+LKK
Sbjct  741   KQLKK  745


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9035  LPSPA  9021
             LP PA
Sbjct  879   LPTPA  883


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3103  MDISNL  3120
             M ISN+
Sbjct  925   MTISNM  930


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6381  ACVMTE  6364
             AC +TE
Sbjct  1018  ACTLTE  1023


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = +2

Query  6665  PNNNTRKR  6688
             P N  R R
Sbjct  1129  PKNKARRR  1136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7268  KAKRR  7282
             KA RR
Sbjct  1132  KARRR  1136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5116  PRRPR  5130
             P RPR
Sbjct  1257  PSRPR  1261


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  194   CSGATAR  174
             CS  T R
Sbjct  1400  CSASTSR  1406


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8265  TSITLSVPS  8239
             TS T  +PS
Sbjct  1404  TSRTVAIPS  1412


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2320  RFQRT  2334
             RFQ T
Sbjct  1444  RFQST  1448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  4708  DITMKALIQE  4737
             D T K L Q+
Sbjct  1532  DLTQKDLLQQ  1541


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1104  PVGE  1115
             PVGE
Sbjct  1581  PVGE  1584


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             DL E+I
Sbjct  1629  DLGEDI  1634


>sp|P17927.3|CR1_HUMAN  RecName: Full=Complement receptor type 1; AltName: Full=C3b/C4b 
receptor; AltName: CD_antigen=CD35; Flags: Precursor
Length=2039

 GENE ID: 1378 CR1 | complement component (3b/4b) receptor 1 (Knops blood group)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1238  LHCTPQGDWSP  1248


 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1691  LHCTPQGDWSP  1701


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  229   APQCIIPNKC  238


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  679   APQCIIPNKC  688


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  1129  APQCIIPNKC  1138


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
 Frame = -3

Query  7565  SNPKSPGAVDPLGIFPQPGFLP  7500
             S P SP  V P    P PG LP
Sbjct  4     SSPRSPEPVGP----PAPG-LP  20


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  363   GQLLNGRVLFPVNLQLGAKVDFVC  386


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  409   WNSSVPV  415


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  813   GQLLNGRVLFPVNLQLGAKVDFVC  836


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  859   WNSSVPV  865


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7605  LVGVINLWN  7631
             LVG   LWN
Sbjct  1302  LVGMRSLWN  1310


 Score = 19.3 bits (38),  Expect(2) =  3389
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  5928  NRVVVASFHTGT  5893
             NR    SFH GT
Sbjct  1534  NR---TSFHNGT  1542


 Score = 15.9 bits (30),  Expect(2) =  3389
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5818  SPPP  5807
             SPPP
Sbjct  1580  SPPP  1583


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1213  QDNFS  1217


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1666  QDNFS  1670


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  1112  SYWDRWIICHPSYL  1071
             SY     IC P YL
Sbjct  1874  SY-----ICDPGYL  1882


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  3773  LFLDGIDKAQDEHEK---YH  3823
             LF++GI K   E E    YH
Sbjct  1913  LFMNGISK---ELEMKKVYH  1929


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1358  SRWSQC  1341
             S WSQC
Sbjct  1947  SPWSQC  1952


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  8684  LPHTR-LLP  8707
             LPH R LLP
Sbjct  1718  LPHGRVLLP  1726


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  512   DFPIGT  517


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  523   CRPEY  527


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  962   DFPIGT  967


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  973   CRPEY  977


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7309  GNRSF  7323
             GNRSF
Sbjct  1604  GNRSF  1608


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  283   PPLASCRAR  257
             PPLA C  R
Sbjct  1960  PPLAKCTSR  1968


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7842  PPTIIMNNFI  7813
             PPTI   +FI
Sbjct  169   PPTITNGDFI  178


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  292  SCSRVCQPPPDV  303


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  742  SCSRVCQPPPDV  753


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3713  CVLVPM  3696
             CVLV M
Sbjct  1300  CVLVGM  1305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3204  SVNCFTSLVW  3175
             S+ C   LVW
Sbjct  1436  SISCLENLVW  1445


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1916  GRWKPKM  1936
             GRW PK+
Sbjct  1637  GRWGPKL  1643


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -3

Query  6047  NFLSHLP---ILL  6018
             +FL +LP   +LL
Sbjct  1713  DFLGQLPHGRVLL  1725


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  1762  WNSSVPV  1768


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8044  RSAEPV  8061
             RS EPV
Sbjct  7     RSPEPV  12


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1692  PEPTAPP  1712
             PEP  PP
Sbjct  9     PEPVGPP  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8643  LALPV  8629
             LALPV
Sbjct  34    LALPV  38


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  220   DQVGIW  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  340   CTPQGDWSP  348


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  670   DQVGIW  675


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  790   CTPQGDWSP  798


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  1120  DQVGIW  1125


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4177  NQAGIWNS  4200
             +Q G+W S
Sbjct  1573  DQVGVWSS  1580


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 12/23 (52%)
 Frame = -3

Query  7232  LYI------YIIHFSNC-PSYLL  7185
             LY       YI     C P YLL
Sbjct  1866  LYLPGMTISYI-----CDPGYLL  1883


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2341  ENSRLL  2358
             ENSR L
Sbjct  2033  ENSRVL  2038


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 5/21 (23%)
 Frame = +1

Query  8941  RSTSRTADIELATRDFPLGTF  9003
             R T  T + E     FP GT+
Sbjct  53    RPTNLTDEFE-----FPIGTY  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1650  PSYKGRP  1670
             P Y GRP
Sbjct  75    PGYSGRP  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  341   TPQGDWSP  348


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  791   TPQGDWSP  798


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1241  TPQGDWSP  1248


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8106  RGLWN  8120
             R LWN
Sbjct  1306  RSLWN  1310


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6641  SVEINCTR  6664
             SVE NC R
Sbjct  1447  SVEDNCRR  1454


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7278  LFALVG  7261
             LF LVG
Sbjct  1557  LFELVG  1562


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1694  TPQGDWSP  1701


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8253  LSVPSA  8236
             LSVP A
Sbjct  1842  LSVPAA  1847


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  559   LDHY  570
             LDHY
Sbjct  1900  LDHY  1903


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  590   HSSAECIL  597


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  1040  HSSAECIL  1047


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  6497  STVQCT---HG  6520
             ST+ CT   HG
Sbjct  1366  STIRCTSDPHG  1376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7839  PTIIMNNF  7816
             PTI  N+F
Sbjct  1407  PTIPINDF  1414


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  132   YQSHT-TDGHTLLE  94
             YQ HT  DG  L E
Sbjct  1546  YQCHTGPDGEQLFE  1559


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5266  GRSGSH  5283
             GRS SH
Sbjct  1747  GRSASH  1752


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6149  VSLKCTD  6169
             V LKC D
Sbjct  1934  VTLKCED  1940


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  589  SIVCIK  606
            SI+C K
Sbjct  83   SIICLK  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  136  RDPSDP  153
            R+P DP
Sbjct  105  RNPPDP  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1092  NPPIPV  1109
             NPP PV
Sbjct  106   NPPDPV  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2350  RLLGSS  2367
             RL GSS
Sbjct  136   RLIGSS  141


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  233   IIPN  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  241   PNVENG  246


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  392   LKGSSAS  398


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  683   IIPN  686


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  691   PNVENG  696


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  842   LKGSSAS  848


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  1133  IIPN  1136


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  1141  PNVENG  1146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             +FL +LP
Sbjct  1260  DFLGQLP  1266


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7107  EHLICP  7090
             EH  CP
Sbjct  1317  EHIFCP  1322


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  1407  PTIPI  1411


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3572  VNIVTDSQY  3598
             V I TD Q+
Sbjct  1468  VHINTDTQF  1476


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5890  IIDCDP  5873
             II C+P
Sbjct  1516  IISCEP  1521


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2960  LTEVI  2974
             LTE+I
Sbjct  1611  LTEII  1615


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6268  SYAC  6257
             SYAC
Sbjct  1800  SYAC  1803


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2420  VLLLIF  2403
             +LL IF
Sbjct  1985  ILLIIF  1990


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 12/36 (33%)
 Frame = -2

Query  1905  ISSNTV---SSAPVSNRASFSC--PP-I----FIVT  1828
             IS +TV      P+ +R    C  PP I    FI T
Sbjct  147   ISGDTVIWDNETPICDR--IPCGLPPTITNGDFIST  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8684  LPHTRLL  8704
             LPH R L
Sbjct  1265  LPHGRVL  1271


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2069  TQIGCTLNF  2095
             TQ G T N+
Sbjct  1474  TQFGSTVNY  1482


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7474  HSLGHQ  7491
             H L HQ
Sbjct  1661  HTLSHQ  1666


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2511  VSLFILGM  2488
             VSL+  GM
Sbjct  1864  VSLYLPGM  1871


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  7272  ALVGATPNGSIF  7237
             AL+  T  G IF
Sbjct  1972  ALIVGTLSGTIF  1983


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  1165  YILTILFNPRII  1130
             +IL I F   II
Sbjct  1984  FILLIIFLSWII  1995


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5704  ILRQRK  5721
             IL +RK
Sbjct  1995  ILKHRK  2000


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8029  GTYL  8040
             GTYL
Sbjct  66    GTYL  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8352  CHPSYS  8335
             C P YS
Sbjct  73    CRPGYS  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5419  GSQPKTACT  5445
             GSQ K  CT
Sbjct  124   GSQIKYSCT  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  366   LNGRVLFPVNL  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  466   STIRCT  471


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  508   TNASDFPI  515


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  543   SSPKDVCK  550


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  606   TKPP  609


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  816   LNGRVLFPVNL  826


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  916   STIRCT  921


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  958   TNASDFPI  965


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  993   SSPKDVCK  1000


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  1056  TKPP  1059


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  6314  IPIDND  6331
             IPI ND
Sbjct  1409  IPI-ND  1413


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7927  PPPNP  7941
             PPP P
Sbjct  1459  PPPEP  1463


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8903  PPSIS  8917
             PP IS
Sbjct  1522  PPTIS  1526


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1869  NRASF  1855
             NR SF
Sbjct  1534  NRTSF  1538


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  238   CTPPN  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  538   DNLVW  542


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  688   CTPPN  692


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  988   DNLVW  992


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  1138  CTPPN  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3355  SLSEI  3369
             SL EI
Sbjct  1610  SLTEI  1614


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8352  CHPSY  8338
             C PSY
Sbjct  1679  CEPSY  1683


>ref|NP_060876.5|  mucin-4 isoform a [Homo sapiens]
Length=5412

 GENE ID: 4585 MUC4 | mucin 4, cell surface associated [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 11/19 (57%), Positives = 12/19 (63%), Gaps = 4/19 (21%)
 Frame = +3

Query  1701  TAPPEE---SFRSGVETTT  1748
             TAPP+E   SF S V T T
Sbjct  113   TAPPDEMTTSFPSSV-TNT  130


 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 9/25 (36%)
 Frame = -2

Query  1302  PTRFLSSNFLPPVKLARL--LEFYR  1234
             P RFL SN         L  L+FYR
Sbjct  4531  PDRFLNSN-------SGLQGLQFYR  4548


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8248  CPLSYCY  8228
             CP  YCY
Sbjct  5122  CPVNYCY  5128


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = +2

Query  7544  LLGI--------WGCSG  7570
             LLG+        WGCSG
Sbjct  5382  LLGVGTFVVLRFWGCSG  5398


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2914  PWVNLTC  2894
             PWV L C
Sbjct  10    PWVSLSC  16


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +3

Query  1713  EESFRSGVETTT  1748
             +E F SG ETTT
Sbjct  367   QETFPSG-ETTT  377


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  7112  NITGLLLTRDGGNSNNESEI  7171
             N TG LL R+G      SE+
Sbjct  4787  NATGVLLSRNG------SEV  4800


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4360  TVPPNPP  4340
             TVPP PP
Sbjct  934   TVPPTPP  940


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 9/24 (37%)
 Frame = +2

Query  7583  TTAVPWNASWSNKSLEQIWNHTTW  7654
             TT   W  S S K       HTTW
Sbjct  486   TT---WPSSFSSKG------HTTW  500


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  4201  GNSKFLLDSR  4172
             GNS FLL  R
Sbjct  4714  GNSSFLLQGR  4723


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6542  QLLL----NGSLAE  6571
             QLLL    N S+AE
Sbjct  5177  QLLLSEEENASMAE  5190


 Score = 19.3 bits (38),  Expect(2) =  1630
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -2

Query  8274  PCTTSITLSVPS  8239
             P TTS  LS PS
Sbjct  346   PVTTSTVLSSPS  357


 Score = 16.8 bits (32),  Expect(2) =  1630
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8121  SSTILVT  8101
             S T LVT
Sbjct  384   SNTFLVT  390


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8898  QTSTLT  8881
             QTSTLT
Sbjct  210   QTSTLT  215


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  2148  PSIPGFNFTGTVS  2110
             PS  GFN  GTVS
Sbjct  356   PS--GFNPSGTVS  366


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4527  ITTAPS  4510
             ITTAPS
Sbjct  610   ITTAPS  615


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6998  GSDTITL  7018
             GSDTI L
Sbjct  918   GSDTISL  924


 Score = 18.0 bits (35),  Expect(2) =  2351
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6581  VIRSVNFT  6604
             V R V+FT
Sbjct  4331  VRRTVDFT  4338


 Score = 17.2 bits (33),  Expect(2) =  2351
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6599  FTDNAKTI  6622
             FTDN   I
Sbjct  4360  FTDNGQII  4367


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4841  DSLTQM  4824
             D LTQM
Sbjct  91    DTLTQM  96


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  3711  CAGTHAR*TFSFFIN  3667
             C G  AR  FS+F N
Sbjct  5396  CSG--AR--FSYFLN  5406


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            LSPSSL
Sbjct  438  LSPSSL  443


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 11/29 (37%)
 Frame = -2

Query  8949  STPDAALGPRDEMLGGCQTS-----TLTL  8878
             S  DA LGP     GG  TS      LTL
Sbjct  718   SSHDATLGPS----GG--TSLSKTGALTL  740


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 5/21 (23%)
 Frame = +3

Query  1662  GRP-GNFLQSRP-EPTAPPEE  1718
             GRP G   QS P  P A P+E
Sbjct  883   GRPTG---QSSPTSPSASPQE  900


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +2

Query  6476  TGPCTNVSTVQCT  6514
             T P TN ST++ T
Sbjct  612   TAPSTNHSTIHST  624


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8902  LSN-LHSNTSL  8873
             LSN LH   SL
Sbjct  4815  LSNILHASASL  4825


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  7099  NLSTDGRGIHC  7067
             NL  DGR  HC
Sbjct  5100  NLTGDGR--HC  5108


 Score = 16.8 bits (32),  Expect(2) =  5562
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  247   PSPASR  230
             PS ASR
Sbjct  4070  PSSASR  4075


 Score = 16.3 bits (31),  Expect(2) =  5562
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  224   PLVSLS  207
             PL SLS
Sbjct  4098  PLTSLS  4103


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8437  APTLSAA  8417
             APT SAA
Sbjct  686   APTISAA  692


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+TNS S
Sbjct  1887  TPLPV----------TDTNSAS  1898


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +2

Query  5915  TTTLFCA-SDAKAYDTEVHNV  5974
             T TLF   S        VHNV
Sbjct  98    TSTLFSSPS--------VHNV  110


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7568  QSNPKSPGA  7542
             QS P SP A
Sbjct  888   QSSPTSPSA  896


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  1384  HA----VIISSSVAAG  1349
             HA    V I SSV  G
Sbjct  3837  HATPLPVTIPSSVSTG  3852


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  122  TQQTGT  105
            TQ+TGT
Sbjct  568  TQETGT  573


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8903  PPSISS  8920
             PPSI S
Sbjct  939   PPSITS  944


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3480  PLLVT  3466
             PLLVT
Sbjct  2224  PLLVT  2228


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6179  DTNTNSSS  6202
             DT+T S S
Sbjct  2979  DTDTSSAS  2986


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7387  TGQTII  7404
             T QTII
Sbjct  4286  TSQTII  4291


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  254   QQAES  240
             QQAES
Sbjct  4428  QQAES  4432


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  7399  LSGLYRQR--H*GCA  7361
             L  LY QR  H GCA
Sbjct  4660  LCALYQQRRPHVGCA  4674


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +3

Query  1710  PEESFR--SGVETTTPP  1754
             PE+ FR   G   T PP
Sbjct  4844  PEDDFRMPNG--STIPP  4858


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +3

Query  6978  KGQITLKEVTQSPSHAE  7028
             KGQ TL    Q  S AE
Sbjct  4966  KGQTTL---IQYTSNAE  4979


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 21/39 (53%)
 Frame = -3

Query  5159  SIHCV--------APS--------VALGLLGLVPSILCQ  5091
             S+HCV         P          ALG      S LCQ
Sbjct  5085  SVHCVPGKGCEACPPNLTGDGRHCAALG-----SSFLCQ  5118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1562  PRGPAI  1545
             PRGP I
Sbjct  5240  PRGPVI  5245


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  2411  VTVLDVG--DAYF  2443
             VT L+V    AYF
Sbjct  5288  VTALNVSTLKAYF  5300


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  677  STASSS*HRT  706
            STA SS  RT
Sbjct  58   STAASS--RT  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  2229  PSFSISVQ  2206
             PSFS SV+
Sbjct  222   PSFSPSVH  229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1744  VVSTP  1730
             VVSTP
Sbjct  744   VVSTP  748


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3095  QGQWT  3109
             +GQWT
Sbjct  752   EGQWT  756


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  8808  ANKGENTSLLHPV  8846
             A KG+ T L  PV
Sbjct  1593  ASKGDTTPL--PV  1603


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6413  WELAQR  6396
             W+ AQR
Sbjct  4494  WDVAQR  4499


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8610  FLKEKGGLEGL  8642
             FL    GL+GL
Sbjct  4534  FLNSNSGLQGL  4544


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +2

Query  6869  GDPEI-----VTHSFNCG-GEF  6916
             GDP I     V   FN G G+F
Sbjct  4686  GDPHITTLDGVSYTFN-GLGDF  4706


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2650  IHVLIDN  2630
             I VL DN
Sbjct  4762  IRVLLDN  4768


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6464  TFNGTG  6481
             TFN TG
Sbjct  4785  TFNATG  4790


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7386  TVSVI  7372
             TVSVI
Sbjct  4809  TVSVI  4813


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7544  LLGIW  7558
             LLG+W
Sbjct  4836  LLGVW  4840


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6752  QAHCNIS  6772
             Q HC IS
Sbjct  5130  QGHCYIS  5136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  230  RAPLVSLS  207
            R P VSLS
Sbjct  8    RVPWVSLS  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8330  SFPSPV  8313
             SFPS V
Sbjct  122   SFPSSV  127


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  4786  VITN--LASPSG  4757
             V T   L SPSG
Sbjct  347   VTTSTVLSSPSG  358


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  177  SSGART---GT  200
            SSG RT   GT
Sbjct  792  SSGSRTTSAGT  802


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T F SNP
Sbjct  828   TRFSSNP  834


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5997  PQTPTH  6014
             PQT TH
Sbjct  950   PQTETH  955


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9074  LPVLGLS  9094
             LPV GLS
Sbjct  1681  LPVTGLS  1687


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9074  LPVLGLS  9094
             LPV GLS
Sbjct  1777  LPVTGLS  1783


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9074  LPVLGLS  9094
             LPV GLS
Sbjct  2417  LPVTGLS  2423


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +2

Query  4100  PVKTIHTDNGSNFTGAT  4150
             PV    TD  S +TG T
Sbjct  2706  PV----TDTSSAYTGDT  2718


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6182  TNTNSSS  6202
             T+T SSS
Sbjct  2724  TDTSSSS  2730


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +2

Query  4100  PVKTIHTDNGSNFTGAT  4150
             PV    TD  S +TG T
Sbjct  3266  PV----TDTSSAYTGDT  3278


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6182  TNTNSSS  6202
             T+T SSS
Sbjct  3284  TDTSSSS  3290


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9074  LPVLGLS  9094
             LPV GLS
Sbjct  3361  LPVTGLS  3367


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9074  LPVLGLS  9094
             LPV GLS
Sbjct  3873  LPVTGLS  3879


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  2356  LGSSIRN  2376
             LGSS R+
Sbjct  4350  LGSSLRD  4356


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7317  ELCSLGSW  7340
             +LCS  SW
Sbjct  4608  QLCSFTSW  4615


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6789  LFHF  6778
             LFHF
Sbjct  4865  LFHF  4868


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1267  CEAC  1256
             CEAC
Sbjct  5094  CEAC  5097


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1050  TTSTLQEQ  1073
             TT TL+ Q
Sbjct  50    TTATLEGQ  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1517  IETLNNL  1497
             I TLN L
Sbjct  338   INTLNTL  344


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  4383  MSTILSP-ALYPP  4348
             +ST LSP  L PP
Sbjct  434   LSTALSPSSL-PP  445


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8881  TSLSGSSIP  8855
             T LS SS P
Sbjct  436   TALSPSSLP  444


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  6660  QDPTTIQEKE---SVS  6698
             Q P T QE +   SVS
Sbjct  641   QAPQTTQESQTTRSVS  656


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3885  TISFATT  3865
             TIS ATT
Sbjct  688   TISAATT  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  2483  FTIPSINNETP  2515
             FT   I N TP
Sbjct  966   FTTALISNATP  976


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6585  ITTSSSA  6565
             +T SSSA
Sbjct  2371  VTSSSSA  2377


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3342  NSHSGIQ  3322
             NS SG Q
Sbjct  4536  NSNSGLQ  4542


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5371  QEMEP  5385
             QE+EP
Sbjct  4643  QELEP  4647


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4098  HLPANF  4081
             +LP NF
Sbjct  4886  QLPSNF  4891


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1138  RIIHLL  1121
             R+I+LL
Sbjct  5174  RVIQLL  5179


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +2

Query  7082  PISGQ-IRCSSNITGL  7126
             PISG+ +R   ++T L
Sbjct  5279  PISGEDVR---DVTAL  5291


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  6932  TQLFNSTWFNS  6964
             TQ+  ST F S
Sbjct  94    TQMMTSTLFSS  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7263  GATPNGS  7243
             G TP GS
Sbjct  812   GTTPSGS  818


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5818  SPPPSPQ  5798
             SP  SPQ
Sbjct  893   SPSASPQ  899


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1583  TFPTAL  1566
             TF TAL
Sbjct  965   TFTTAL  970


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 10/24 (41%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSSGR  6208
             TPL V          T+T S S R
Sbjct  3887  TPLPV----------TDTSSASTR  3900


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1124  KMDNPG  1141
             KM+ PG
Sbjct  4259  KMETPG  4264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1296  LLVQNA  1313
             LLVQ A
Sbjct  4425  LLVQQA  4430


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7107  EHLI  7096
             EHLI
Sbjct  4907  EHLI  4910


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  705   HSNQVSQNY  731
             H  +VS NY
Sbjct  4934  HTREVSKNY  4942


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -2

Query  6519  PC---VHC  6505
             PC   VHC
Sbjct  5081  PCFPSVHC  5088


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3157  CKNEGCP  3177
             C N+ CP
Sbjct  5117  CQNQSCP  5123


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  1851  CPPIFIVTRGRC  1816
             CPP F  T  RC
Sbjct  5147  CPPAF--TDSRC  5156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5306  AVVAEFL  5286
             AVV  FL
Sbjct  5255  AVVEAFL  5261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8925  PRDEM  8911
             P DEM
Sbjct  115   PPDEM  119


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  8683  ST-THKATS  8706
             ST TH  TS
Sbjct  212   STLTHRTTS  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2078  QSESTD  2061
             Q EST+
Sbjct  775   QAESTE  780


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  126  SHTTDGHT-LLEA  91
            SHTT   T LL A
Sbjct  838  SHTTQSTTELLSA  850


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7925  THLP  7936
             THLP
Sbjct  2415  THLP  2418


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  224   PLVSLS  207
             PL SLS
Sbjct  2898  PLTSLS  2903


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 4/19 (21%)
 Frame = +2

Query  4100  PVKTIHTDNGSNFTGATVR  4156
             PV    TD  S  TG T R
Sbjct  3602  PV----TDTSSASTGDTTR  3616


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 4/19 (21%)
 Frame = +2

Query  4100  PVKTIHTDNGSNFTGATVR  4156
             PV    TD  S  TG T R
Sbjct  3666  PV----TDTSSASTGDTTR  3680


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8253  LSVPSAT  8233
             L V SAT
Sbjct  4241  LAVSSAT  4247


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3865  RWQVKIT  3845
             RW  K+T
Sbjct  4446  RWALKVT  4452


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5579  LYQS  5590
             LYQS
Sbjct  4486  LYQS  4489


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2429  GDAYF  2443
             GD YF
Sbjct  4511  GDGYF  4515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9006  GRRGLG  9023
             GR GLG
Sbjct  4600  GRWGLG  4605


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5858  HYRSS  5844
             +YRSS
Sbjct  4741  QYRSS  4745


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8376  GWPTV  8390
             GW TV
Sbjct  4806  GWATV  4810


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8720  LHTR  8731
             LHTR
Sbjct  4933  LHTR  4936


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1181  NAGRAIHSY  1155
             N GR I  Y
Sbjct  4957  NGGRVIEAY  4965


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8252  RVIE  8263
             RVIE
Sbjct  4960  RVIE  4963


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  5946  LASDAQNRVVV  5914
             LAS  Q R VV
Sbjct  5023  LASALQPRTVV  5033


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4428  VICFCN  4411
             V+C CN
Sbjct  5032  VVCHCN  5037


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8873  LRVIH  8859
             LRVI+
Sbjct  5173  LRVIQ  5177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3834  EQWLVI  3851
             ++W+VI
Sbjct  5228  QHWMVI  5233


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7068  QCMPLPS  7088
             QC  LPS
Sbjct  5334  QCQHLPS  5340


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2475  YFLKS  2461
             YFL S
Sbjct  5403  YFLNS  5407


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 0/13 (0%)
 Frame = +3

Query  1713  EESFRSGVETTTP  1751
             EE    G E  TP
Sbjct  152   EETSTAGTESSTP  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7668  EKLTIT  7685
             EK T+T
Sbjct  262   EKITVT  267


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  131  TRVTQ  117
            TRV Q
Sbjct  333  TRVSQ  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5813  TPISTS  5796
             TP+ TS
Sbjct  345   TPVTTS  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7522  FHSQDS  7505
             FH Q S
Sbjct  451   FHTQQS  456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2888  SISPLT  2871
             S+SP+T
Sbjct  654   SVSPMT  659


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  4106  KTIHTDNGSNFT  4141
             KT+ T  GS FT
Sbjct  662   KTV-TTPGSSFT  672


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6694  TDSFS  6680
             TD FS
Sbjct  929   TDTFS  933


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8431  TLSAAGS  8411
             TLS  GS
Sbjct  956   TLSPSGS  962


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  3243  HITMLSVVIFCTAS  3202
             H+T L V  F  AS
Sbjct  1037  HVTPLPVTSFSSAS  1050


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1055  TPLPV----------TDTSSAS  1066


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1087  TPLPV----------TDTSSAS  1098


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1119  TPLPV----------TDTSSAS  1130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1247  TPLPV----------TDTSSAS  1258


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1455  TPLPV----------TDTSSAS  1466


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1583  TPLPV----------TDTSSAS  1594


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  1615  TPLPV----------TDTSSAS  1626


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  2031  TPLPV----------TDTSSAS  2042


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  2191  TPLPV----------TDTSSAS  2202


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  2399  TPLPV----------TDTSSAS  2410


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  2751  TPLPV----------TDTSSAS  2762


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  2911  TPLPV----------TDTSSAS  2922


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  2943  TPLPV----------TDTSSAS  2954


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3039  TPLPV----------TDTSSAS  3050


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3071  TPLPV----------TDTSSAS  3082


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3119  TPLPV----------TDTSSAS  3130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3151  TPLPV----------TDTSSAS  3162


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3455  TPLPV----------TDTSSAS  3466


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7004  DTITLP  7021
             DT TLP
Sbjct  3501  DTSTLP  3506


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3599  TPLPV----------TDTSSAS  3610


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3663  TPLPV----------TDTSSAS  3674


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3791  TPLPV----------TDTSSAS  3802


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  3903  TPLPV----------TDTSSAS  3914


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7926  PTSQPRGD  7949
             P S  RGD
Sbjct  4070  PSSASRGD  4077


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7004  DTITLP  7021
             DT TLP
Sbjct  4077  DTSTLP  4082


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  4111  TPLPV----------TDTSSAS  4122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  4191  TPLPV----------TDTSSAS  4202


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 10/22 (45%)
 Frame = +2

Query  6137  TPLCVSLKCTDLKNDTNTNSSS  6202
             TPL V          T+T S S
Sbjct  4207  TPLPV----------TDTSSAS  4218


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7851  PTKPPTII  7828
             PT   TII
Sbjct  4284  PTTSQTII  4291


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4839  LPDPNASLF  4813
             LP+   SLF
Sbjct  4311  LPERGVSLF  4319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8986  FPLG  8997
             FPLG
Sbjct  4348  FPLG  4351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1653  KARSSLK  1633
             KAR  LK
Sbjct  4444  KARWALK  4450


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6556  WQSSRR  6573
             WQ  RR
Sbjct  4585  WQQGRR  4590


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3777  NSTFL  3763
             NS FL
Sbjct  4715  NSSFL  4719


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7032  FILHGR  7015
             F L+GR
Sbjct  4718  FLLQGR  4723


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 10/24 (41%)
 Frame = +1

Query  8932  SCI------RSTSRTADIELATRD  8985
             SCI      R  S    I L TR+
Sbjct  4918  SCIYDTLALRNAS----IGLHTRE  4937


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7712  LQLRSVLSLCN  7680
             LQ R V   CN
Sbjct  5027  LQPRTVVCHCN  5037


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3081  YRSRG  3095
             YR RG
Sbjct  5238  YRPRG  5242


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7260  HPPRQREE  7283
             H PR  EE
Sbjct  5263  HVPRRSEE  5270


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5560  SQTHQ  5574
             SQ HQ
Sbjct  74    SQNHQ  78


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2812  DSTAYS  2829
             D TA+S
Sbjct  317   DTTAFS  322


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5036  SSINNT  5053
             SS+ NT
Sbjct  381   SSVSNT  386


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 0/13 (0%)
 Frame = -1

Query  979  TLSHSAASSLMVS  941
            TL      SL VS
Sbjct  403  TLGNTEETSLSVS  415


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5363  LSSNAYS  5343
             LSS  YS
Sbjct  579   LSSPSYS  585


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2530  LISN  2519
             LISN
Sbjct  970   LISN  973


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  1202  LVTDTSSA  1209


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  1410  LVTDTSSA  1417


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  1746  LVTDASSA  1753


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8268  TTSITLSVPS  8239
             TTS    +PS
Sbjct  1838  TTSLPVTIPS  1847


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4459  PVINP  4445
             PV NP
Sbjct  2066  PVTNP  2070


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3212  ALPLLI  3195
             A PLL+
Sbjct  2222  AIPLLV  2227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  2226  LVTDTSSA  2233


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9013  RLPGKSP  8993
             RLP  SP
Sbjct  2496  RLPVTSP  2502


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  2642  LVTDASSA  2649


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  3202  LVTDASSA  3209


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L+T  SSA
Sbjct  3314  LVTDASSA  3321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  1878  PVSNRAS  1858
             PV  R S
Sbjct  3970  PVTSRSS  3976


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7925  SETIMVNIP  7899
             S+TI   IP
Sbjct  4287  SQTIISTIP  4295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4152  TVAPVKLLP  4126
             T AP+  LP
Sbjct  4304  TAAPIPILP  4312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7330  WVLGS  7344
             W LGS
Sbjct  4463  WTLGS  4467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2456  DEDFR  2470
             ++DFR
Sbjct  4845  EDDFR  4849


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3576  FTSNPE  3559
             +TSN E
Sbjct  4974  YTSNAE  4979


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5485  CFITKALG  5508
             C+I   LG
Sbjct  5133  CYISQTLG  5140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9062  SSCFL  9076
             S CFL
Sbjct  5154  SRCFL  5158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  1973  TVLL**NLQFPL  1938
             TV    NL+ PL
Sbjct  5166  TV----NLELPL  5173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7464  RCCCAS  7447
             RC C S
Sbjct  5343  RCSCVS  5348


>ref|NP_001138984.1|  nuclear factor 1 A-type isoform 4 [Homo sapiens]
Length=554

 GENE ID: 4774 NFIA | nuclear factor I/A [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2084  TLNFPISPI  2110
             TL FP SPI
Sbjct  412   TLHFPTSPI  420


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query  2357  W-EVQLGIPHPAGLKK  2401
             W EV+ G P P  LKK
Sbjct  355   WHEVEPGMPSPTTLKK  370


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  1086  SSILFVP  1066
             SS+L+VP
Sbjct  9     SSVLYVP  15


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             PSPPP
Sbjct  30    PSPPP  34


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7848  TKPPT  7834
             TKPPT
Sbjct  501   TKPPT  505


 Score = 18.0 bits (35),  Expect(2) =  7806
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3756  LESGKYY  3776
             LES  YY
Sbjct  294   LESSSYY  300


 Score = 16.3 bits (31),  Expect(2) =  7806
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3637  IRVSQ  3651
             +RVSQ
Sbjct  274   VRVSQ  278


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  2513  PGIRYQYNVLPQ  2548
             P IRY+    PQ
Sbjct  431   PAIRYH----PQ  438


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  2088  KVQPI*VNRFLPI-ML  2044
             KV+    N FLP  ML
Sbjct  471   KVH----NPFLPTPML  482


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  483   PPPPPPP  489


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6979  FSTPST  6962
             +STPST
Sbjct  520   YSTPST  525


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5925  YFVH  5936
             YFVH
Sbjct  226   YFVH  229


 Score = 17.2 bits (33),  Expect(2) = 16950
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1127  MDNPG  1141
             MD PG
Sbjct  330   MDSPG  334


 Score = 15.5 bits (29),  Expect(2) = 16950
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1008  PGQMR  1022
             PG MR
Sbjct  304   PGAMR  308


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
 Frame = -1

Query  9034  SPVPPRPRLPGKSPAE--SPL  8978
             SP P R R P   PA   SPL
Sbjct  31    SPPPRRTRIP-QRPAVMYSPL  50


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  909  PLCL  898
            PLCL
Sbjct  49   PLCL  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  7168  DLQTWRRRY  7194
             +LQ   R Y
Sbjct  77    NLQARKRKY  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5033  TSSINNTK  5056
             TSS   TK
Sbjct  314   TSSTSSTK  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7774  FVELV  7788
             FV+LV
Sbjct  444   FVQLV  448


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  3341  FVNTPPLVKLWY  3376
             FVN P     WY
Sbjct  541   FVNIPQQTQSWY  552


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6982  PFSTPST  6962
             P  TPST
Sbjct  406   PHATPST  412


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4196  IPYNPQ  4213
             I Y PQ
Sbjct  433   IRYHPQ  438


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8671  RISCL  8657
             RI CL
Sbjct  161   RIDCL  165


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  903  CL-----AWCLNLV  877
            CL      W L+LV
Sbjct  164  CLRQADKVWRLDLV  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8874  SPGHPSHA  8851
             SP +PS A
Sbjct  238   SPSQPSDA  245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3792  SIPSKNST  3769
             S PS  ST
Sbjct  310   SLPSTSST  317


>ref|NP_004122.2|  granzyme B precursor [Homo sapiens]
Length=247

 GENE ID: 3002 GZMB | granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated
serine esterase 1) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  8696  LCVVDPQIK  8670
             LCV DP+IK
Sbjct  187   LCVGDPEIK  195


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 10/24 (41%)
 Frame = -3

Query  2426  HPVLLLIFSFLTLRDVVFLIELPR  2355
             +P+LLL   FL L        LPR
Sbjct  2     QPILLLL-AFL-L--------LPR  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6029  PILLL  6015
             PILLL
Sbjct  3     PILLL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4637  PHPVYLPHN  4611
             PHP Y P N
Sbjct  96    PHPAYNPKN  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  7620  LLLQLAF  7600
             LLL LAF
Sbjct  5     LLL-LAF  10


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7318  SFVPWV  7335
             SFV W+
Sbjct  235   SFVHWI  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7438  QQIVLLL  7418
             Q I LLL
Sbjct  2     QPILLLL  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4707  RHHYES  4724
             RH Y+S
Sbjct  178   RHYYDS  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4784  YYQSSI  4767
             YY S I
Sbjct  180   YYDSTI  185


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6380  ACPKVS  6397
             AC KVS
Sbjct  229   ACTKVS  234


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  7754  PIILVHSFL  7728
             PI L   FL
Sbjct  3     PILLLLAFL  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3080  FLLL  3069
             FLLL
Sbjct  10    FLLL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  906  VGGHQA  923
            +GGH+A
Sbjct  22   IGGHEA  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7620  LLLQL  7606
             +LLQL
Sbjct  110   MLLQL  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  6470  NGTGP--CTNVS  6499
             NG  P  CT VS
Sbjct  223   NGMPPRACTKVS  234


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2819  QPIVL  2833
             QPI L
Sbjct  2     QPILL  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8033  LIWDD  8047
             LI DD
Sbjct  53    LIRDD  57


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6227  EIKNCSF  6247
             EIK  SF
Sbjct  193   EIKKTSF  199


>pdb|2VV0|A  Chain A, Hppargamma Ligand Binding Domain In Complex With Dha
 pdb|2VV0|B  Chain B, Hppargamma Ligand Binding Domain In Complex With Dha
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +2

Query  7424  QNNLLRAIEAQQHLLQL  7474
             Q+NLL A E     LQL
Sbjct  209   QDNLLQALE-----LQL  220


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3203  EAVQKIT  3223
             EAVQ IT
Sbjct  90    EAVQEIT  96


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/12 (41%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  5219  LHGLGQHIYETY  5254
             L  L  H Y+ Y
Sbjct  10    LRALAKHLYDSY  21


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +1

Query  3304  RVLASHL-DS  3330
             R LA HL DS
Sbjct  11    RALAKHLYDS  20


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6753  KHIVTLVEQ  6779
             KHI  L EQ
Sbjct  64    KHITPLQEQ  72


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/28 (28%), Positives = 10/28 (35%), Gaps = 17/28 (60%)
 Frame = -3

Query  3122  DK-----FDMSIGLAPASVFLLLSLLMG  3054
             DK     +DM             SL+MG
Sbjct  42    DKSPFVIYDMN------------SLMMG  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  292  EYAK  303
            EYAK
Sbjct  97   EYAK  100


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1791  LTSLRSLFGN  1820
             L SLR  FG+
Sbjct  152   LKSLRKPFGD  161


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8045  DLRSL  8059
             DLR L
Sbjct  9     DLRAL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6929  STQLF  6943
             S QLF
Sbjct  227   SSQLF  231


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7795  YVKPIP  7778
             Y K IP
Sbjct  98    YAKSIP  103


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2887  ELGKSDL  2907
             EL  SDL
Sbjct  177   ELDDSDL  183


>sp|Q92545.2|TM131_HUMAN  RecName: Full=Transmembrane protein 131; AltName: Full=Protein 
RW1
Length=1834

 GENE ID: 23505 TMEM131 | transmembrane protein 131 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = -1

Query  4903  SWSASSGS-----TCVL  4868
             SW ASSGS     T VL
Sbjct  1727  SWPASSGSPTHTATSVL  1743


 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = -1

Query  8314  SYSSRYVANSSTSS  8273
             SYSS  + NSS SS
Sbjct  1570  SYSS--IVNSSSSS  1581


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  966   EWDRVHPVH  992
             EWD V PVH
Sbjct  1514  EWDSV-PVH  1521


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = +3

Query  1602  MKDCTE----RQANF  1634
             +KDCT+    R+ NF
Sbjct  950   LKDCTDSLKLREPNF  964


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +3

Query  2337  IRELK---TSG  2360
             IRELK   TSG
Sbjct  1029  IRELKFITTSG  1039


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3674  KKEKVYL  3694
             K EKVYL
Sbjct  77    KMEKVYL  83


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +3

Query  3510  QQIRRLS------YK  3536
             QQIR LS      YK
Sbjct  657   QQIRSLSEDVRFYYK  671


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  4201  GNSKFLLDSRPP  4166
             G SK L D RPP
Sbjct  1476  GTSK-LVDNRPP  1486


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2112  SIGLMG  2095
             SIGLMG
Sbjct  1779  SIGLMG  1784


 Score = 21.4 bits (43),  Expect(2) =  1047
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8192  LVPDSNTV  8169
             LV DSNTV
Sbjct  1214  LVLDSNTV  1221


 Score = 16.3 bits (31),  Expect(2) =  1047
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8287  SSTSS  8273
             SSTSS
Sbjct  1192  SSTSS  1196


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  3162  LA--YFPVFR  3139
             LA  YF VFR
Sbjct  575   LASGYFAVFR  584


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1567  RAVGNVE  1587
             R VGNVE
Sbjct  129   RVVGNVE  135


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3737  VDKLVS  3754
             VDKLVS
Sbjct  829   VDKLVS  834


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  1749  PPQKQEPIDKE  1781
             PP KQE  +KE
Sbjct  1344  PPKKQE--EKE  1352


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  203   KAKGKPEE  226
             K KGKP+E
Sbjct  1354  KGKGKPQE  1361


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2561  ILSIPVEA  2538
             IL IPV A
Sbjct  608   ILTIPVKA  615


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8680  GSTTHKATS  8706
             GS TH ATS
Sbjct  1733  GSPTHTATS  1741


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1587  FHISNSP  1567
             FHI +SP
Sbjct  393   FHIRDSP  399


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  2369  IELPRSLEF  2343
             I+L R LEF
Sbjct  844   IDL-RTLEF  851


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  8877  LSPG---HPSH  8854
             LSP    HPSH
Sbjct  1272  LSPAPLAHPSH  1282


 Score = 17.6 bits (34),  Expect(2) =  5126
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4169  WAGIKQ  4186
             W GIK+
Sbjct  742   WTGIKE  747


 Score = 16.8 bits (32),  Expect(2) =  5126
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4179  SSRNLEFP  4202
             S R L FP
Sbjct  783   SPRHLKFP  790


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  7830  IMNNFIYHSQ  7801
             IMN F   SQ
Sbjct  646   IMNSF---SQ  652


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 15/33 (45%)
 Frame = +2

Query  8006  IRLVNGSLALIWDDLRSLCLFSYHRLR----DL  8092
             IR    SL    +D R    F Y RLR    DL
Sbjct  659   IR----SLS---EDVR----FYYKRLRGNKEDL  680


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8287  SSTSSLY  8267
             SST SLY
Sbjct  1525  SSTDSLY  1531


 Score = 18.9 bits (37),  Expect(2) =  6159
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1165  YILTILF  1145
             YI T LF
Sbjct  450   YIFTLLF  456


 Score = 15.1 bits (28),  Expect(2) =  6159
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1073  LFLKGTSS  1050
             LF+  TSS
Sbjct  455   LFMPSTSS  462


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8325  SKPCLIL  8305
             SKP LIL
Sbjct  438   SKPVLIL  444


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7558  PNPQEL  7541
             PN QEL
Sbjct  1493  PNSQEL  1498


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  2081  NQSESTDF  2058
             N S+ST+F
Sbjct  251   NASDSTEF  258


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             PSPP  P
Sbjct  1556  PSPPAAP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1866  RASFS  1852
             RASFS
Sbjct  231   RASFS  235


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5118  QKTKG  5132
             QKTKG
Sbjct  1472  QKTKG  1476


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 2/19 (10%)
 Frame = -3

Query  5846  STSQGAWCPISTPISTSAD  5790
             S S G W P+S P   S D
Sbjct  1652  SDSSGLWSPVSNP--SSPD  1668


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3541  LSSFAGFG  3564
             L SF  FG
Sbjct  1672  LNSFSAFG  1679


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8273  GACRAIR  8293
             G CR IR
Sbjct  54    GNCRPIR  60


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4248  NSLFID  4231
             N LFI+
Sbjct  136   NTLFIN  141


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  3459  QDMLLIEEDK  3488
             +D LL EE K
Sbjct  420   HDVLLPEEAK  429


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  4409  ELQKQ-ITKI  4435
             +LQK  I KI
Sbjct  762   DLQKNIISKI  771


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6267  LMLVLILK  6244
             L L LILK
Sbjct  875   LILNLILK  882


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -1

Query  1153  ILFNP-----RII  1130
             ILF P     R+I
Sbjct  1017  ILFTPDFTASRVI  1029


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/23 (34%), Positives = 9/23 (39%), Gaps = 11/23 (47%)
 Frame = +2

Query  4790  ILGSAY----------RRKRLAF  4828
             + G AY          RR RL F
Sbjct  1086  VIGTAYLEAQGIWEPFRR-RLSF  1107


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  896   AKHSGGTSS  922
             AK S  TSS
Sbjct  1188  AKNSSSTSS  1196


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -2

Query  9006  LESPQR-----KVP  8980
             LES QR     K+P
Sbjct  1444  LESKQRRNLPSKIP  1457


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = -1

Query  7210  SPIVPHI--SSSRSEDLG  7163
             SP  PH    SS  +DLG
Sbjct  1788  SP-APHAPSTSSPADDLG  1804


 Score = 15.5 bits (29),  Expect(2) = 20668
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  8456  FQVSRCCSHP  8427
             FQV R   HP
Sbjct  851   FQVFRNSAHP  860


 Score = 15.5 bits (29),  Expect(2) = 20668
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8404  LILSL  8390
             LIL L
Sbjct  875   LILNL  879


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5028  SIVEIL  5011
             SI+E+L
Sbjct  20    SIIEVL  25


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  5850  IINI--PRS  5830
             IINI  P S
Sbjct  180   IINIHNPHS  188


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2441  NMHHPH  2424
             N H PH
Sbjct  182   NIHNPH  187


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1922  IFLANSF  1902
             I+L N F
Sbjct  407   IYLTNTF  413


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  1230  RFY-KTLR  1250
             RFY K LR
Sbjct  667   RFYYKRLR  674


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1502  NLSLVPKI  1479
             NLS V KI
Sbjct  837   NLSKVAKI  844


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  1593  LPFHISNSPF  1564
             L F  SN PF
Sbjct  1105  LSFEASNPPF  1114


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4348  NPPF  4337
             NPPF
Sbjct  1111  NPPF  1114


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  203   KAKGKP  220
             K KGKP
Sbjct  1332  KGKGKP  1337


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3673  KKGKG  3687
             KKGKG
Sbjct  1353  KKGKG  1357


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3535  SNLSS  3549
             SNLSS
Sbjct  1762  SNLSS  1766


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6567  ARLPFNSS  6544
             AR P NSS
Sbjct  169   ARVPVNSS  176


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1734  VETTTPP  1754
             VE TT P
Sbjct  265   VEVTTAP  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  223  GALSTQD  243
            G L TQD
Sbjct  283  GTLRTQD  289


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7906  FTIIVSDP  7929
             F II S+P
Sbjct  518   FAIINSNP  525


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2511  HQGLDI  2528
             HQ L+I
Sbjct  641   HQSLNI  646


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8612  KVAKIY  8595
             K+A IY
Sbjct  687   KIANIY  692


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2252  ENPYNTPVF  2278
             ENP + PV+
Sbjct  805   ENPADVPVY  813


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  396  LRPGGKKKYKLK  431
            L PG KK  K K
Sbjct  881  LKPGEKKSVKVK  892


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1434  MSQV  1445
             MSQV
Sbjct  1410  MSQV  1413


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2150  PKVKQ  2164
             PK+KQ
Sbjct  1583  PKIKQ  1587


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 3/13 (23%)
 Frame = +2

Query  5975  WATHACVPTDPNP  6013
             W   A   TDP P
Sbjct  1717  WESPA---TDPSP  1726


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6982  PFSTP  6968
             PF TP
Sbjct  1769  PFTTP  1773


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1582  HFQQPFF  1562
             HF+  FF
Sbjct  103   HFHASFF  109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7914  YRFRP  7928
             YR RP
Sbjct  161   YRLRP  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1164  YSPTSILD  1187
             YS T  LD
Sbjct  274   YSSTEMLD  281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = +2

Query  3011  NREILKEPVHG-------VYYDP  3058
             N E L EP  G       +Y+DP
Sbjct  676   NKEDL-EP--GKKSKIANIYFDP  695


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  522  VPVFV  508
            VPV+V
Sbjct  810  VPVYV  814


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5190  KLLDI  5204
             KLL+I
Sbjct  1419  KLLNI  1423


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6918  KNSPP  6904
             K+SPP
Sbjct  1508  KDSPP  1512


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9032  PSPAQATPP  9006
             P PA   PP
Sbjct  1551  PTPASPSPP  1559


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 2/18 (11%)
 Frame = -2

Query  4413  NSLVCMSVAIMSTILSPA  4360
             N L   S+  M T  SPA
Sbjct  1775  NTLA--SIGLMGTENSPA  1790


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  3187  IISVGTPHS  3161
             II +  PHS
Sbjct  180   IINIHNPHS  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7667  REINNYTSLI  7696
             RE +N T  I
Sbjct  237   READNHTAFI  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4527  ITTAP  4513
             +TTAP
Sbjct  267   VTTAP  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5849  ICSATEKL  5872
             I S TE L
Sbjct  273   IYSSTEML  280


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7804  PICYVKPIPQ  7775
             PI  V P PQ
Sbjct  307   PITSVRPTPQ  316


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1086  SSILF  1072
             S ILF
Sbjct  514   SNILF  518


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5062  IFFGVIN  5042
             I F +IN
Sbjct  516   ILFAIIN  522


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4185  RNLEF  4199
             R LEF
Sbjct  847   RTLEF  851


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4839  LPDPNASL  4816
             LP P  SL
Sbjct  934   LPGPGSSL  941


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6556  WQSSRRR  6576
             W+  RRR
Sbjct  1098  WEPFRRR  1104


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8186  ELKNS  8200
             ELK+S
Sbjct  1363  ELKDS  1367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6005  PNPQE  6019
             PN QE
Sbjct  1493  PNSQE  1497


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  286   SPPLASC  266
             SPP A C
Sbjct  1557  SPPAAPC  1563


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3107  TYQIY  3121
             TYQ++
Sbjct  149   TYQVF  153


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3732  SFPPI  3718
             SF PI
Sbjct  176   SFSPI  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  5493  YETNLAMKA  5467
             YET   M A
Sbjct  224   YETKGVMRA  232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  291  TSRRPSP  271
            TS RP P
Sbjct  309  TSVRPTP  315


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6987  ITLK  6998
             ITLK
Sbjct  327   ITLK  330


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3888  ATISF  3874
             A ISF
Sbjct  340   ASISF  344


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2936  YIIALL  2919
             YI  LL
Sbjct  450   YIFTLL  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2536  IVLISN  2519
             I LI N
Sbjct  469   ILLITN  474


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3396  MGSFS  3382
             M SFS
Sbjct  647   MNSFS  651


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2676  SKSDP  2662
             SKS+P
Sbjct  711   SKSEP  715


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1619  LSTIF  1605
             LS IF
Sbjct  753   LSAIF  757


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7229  KVVKIE  7246
             KV KI+
Sbjct  840   KVAKID  845


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5341  LCRHPIL  5321
             L RH IL
Sbjct  871   LSRHLIL  877


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8718  SANQGSSLV  8692
             SAN  S LV
Sbjct  1207  SANKTSPLV  1215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  1256  PLPPP  1260


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3836  AMASDFN  3856
             AM  DF+
Sbjct  1304  AMDKDFD  1310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7572  FPEQP  7558
             F EQP
Sbjct  1320  FTEQP  1324


>pdb|2Z7X|B  Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced 
By Binding Of A Tri-Acylated Lipopeptide
Length=520


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
 Frame = +3

Query  2289  KKTVLNGEN**ISENLIRELKTS  2357
             K T+LN     IS+N I EL TS
Sbjct  22    KTTILN-----ISQNYISELWTS  39


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +2

Query  5246  ETYGDTWAGVEAIIRILQ  5299
             ET   TW      IRILQ
Sbjct  231   ET---TW---NSFIRILQ  242


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +2

Query  7622  SLEQIWNHTTWMEWD  7666
             SL+ IW HT    WD
Sbjct  469   SLQKIWLHTN--PWD  481


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = -2

Query  2262  YGFSGP---IFEIFPSFSI  2215
             +GF  P   I+EIF    I
Sbjct  288   FGF--PQSYIYEIFSNMNI  304


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  529  CSCPSI  512
            CSCP I
Sbjct  482  CSCPRI  487


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  3804  MNMRNITV  3827
             MN  N TV
Sbjct  302   MNIKNFTV  309


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1173  TSILDIRQ  1196
             T IL+I Q
Sbjct  23    TTILNISQ  30


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/37 (32%), Positives = 14/37 (37%), Gaps = 19/37 (51%)
 Frame = +2

Query  5162  LELLEELK---NE--AVRHFP-----------RIWLH  5224
             LE L+EL    N+   V   P            IWLH
Sbjct  443   LEALQELNVASNQLKSV---PDGIFDRLTSLQKIWLH  476


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4687  FPETYI  4670
             FP+ YI
Sbjct  290   FPQSYI  295


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3074  LLSLLMGHNTL  3042
             LLSL M  N L
Sbjct  401   LLSLNMSSNIL  411


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6052  VKIFCH  6035
             VKI CH
Sbjct  82    VKISCH  87


 Score = 17.6 bits (34),  Expect(2) = 14402
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3786  PSKNSTFL  3763
             PSK S FL
Sbjct  320   PSKISPFL  327


 Score = 15.5 bits (29),  Expect(2) = 14402
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3855  LKSLAI  3838
             LK L I
Sbjct  275   LKALSI  280


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  7004  DTI--TLPCRIK  7033
             DTI   LP RIK
Sbjct  413   DTIFRCLPPRIK  424


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7896  LTLFTIEST  7870
             LTL  IE T
Sbjct  225   LTLNNIETT  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7232  VVKIEPL  7252
             VVK E L
Sbjct  440   VVKLEAL  446


 Score = 16.3 bits (31),  Expect(2) = 25058
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3933  CPCMASPF  3910
             CP   SPF
Sbjct  319   CPSKISPF  326


 Score = 15.5 bits (29),  Expect(2) = 25058
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3903  HLSQLAT  3883
             HL +L T
Sbjct  346   HLTELET  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2170  IDRRKN  2187
             +DR KN
Sbjct  5     VDRSKN  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/26 (26%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
 Frame = +2

Query  6032  NVTENF--NMWKNDMVEQMHEDIISL  6103
             N+ +N+   +W  D        I SL
Sbjct  27    NISQNYISELWTSD--------ILSL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6740  GNMRQ  6754
             GNM Q
Sbjct  112   GNMSQ  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1165  YILTIL  1148
             Y L IL
Sbjct  208   YFLSIL  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7853  LRIVF  7867
             L IVF
Sbjct  168   LHIVF  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1508  LNNLSL  1491
             L NL L
Sbjct  222   LSNLTL  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 13/28 (46%)
 Frame = +2

Query  7583  TTAVPWNASWSNKS----LEQIWNHTTW  7654
             TT   WN      S    L+ +W  T W
Sbjct  232   TT---WN------SFIRILQLVWHTTVW  250


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6617  TIIVQLN  6637
             T I Q+N
Sbjct  352   TLILQMN  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3575  NIVTD  3589
             NI TD
Sbjct  409   NILTD  413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3500  LTDT  3511
             LTDT
Sbjct  411   LTDT  414


>pdb|2Q7Z|A  Chain A, Solution Structure Of The 30 Scr Domains Of Human Complement 
Receptor 1
Length=1931


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1197  LHCTPQGDWSP  1207


 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1650  LHCTPQGDWSP  1660


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  188   APQCIIPNKC  197


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  638   APQCIIPNKC  647


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  1088  APQCIIPNKC  1097


 Score = 18.5 bits (36),  Expect(2) =  1552
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  322   GQLLNGRVLFPVNLQLGAKVDFVC  345


 Score = 18.5 bits (36),  Expect(2) =  1552
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  368   WNSSVPV  374


 Score = 18.5 bits (36),  Expect(2) =  1552
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  772   GQLLNGRVLFPVNLQLGAKVDFVC  795


 Score = 18.5 bits (36),  Expect(2) =  1552
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  818   WNSSVPV  824


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7605  LVGVINLWN  7631
             LVG   LWN
Sbjct  1261  LVGMRSLWN  1269


 Score = 19.3 bits (38),  Expect(2) =  3453
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  5928  NRVVVASFHTGT  5893
             NR    SFH GT
Sbjct  1493  NR---TSFHNGT  1501


 Score = 15.9 bits (30),  Expect(2) =  3453
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5818  SPPP  5807
             SPPP
Sbjct  1539  SPPP  1542


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1172  QDNFS  1176


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1625  QDNFS  1629


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  1112  SYWDRWIICHPSYL  1071
             SY     IC P YL
Sbjct  1833  SY-----ICDPGYL  1841


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  3773  LFLDGIDKAQDEHEK---YH  3823
             LF++GI K   E E    YH
Sbjct  1872  LFMNGISK---ELEMKKVYH  1888


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1358  SRWSQC  1341
             S WSQC
Sbjct  1906  SPWSQC  1911


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  8684  LPHTR-LLP  8707
             LPH R LLP
Sbjct  1677  LPHGRVLLP  1685


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  283   PPLASC--RA  260
             PPLA C  RA
Sbjct  1919  PPLAKCTSRA  1928


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  471   DFPIGT  476


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  482   CRPEY  486


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  921   DFPIGT  926


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  932   CRPEY  936


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7309  GNRSF  7323
             GNRSF
Sbjct  1563  GNRSF  1567


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7842  PPTIIMNNFI  7813
             PPTI   +FI
Sbjct  128   PPTITNGDFI  137


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  251  SCSRVCQPPPDV  262


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  701  SCSRVCQPPPDV  712


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3713  CVLVPM  3696
             CVLV M
Sbjct  1259  CVLVGM  1264


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3204  SVNCFTSLVW  3175
             S+ C   LVW
Sbjct  1395  SISCLENLVW  1404


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1916  GRWKPKM  1936
             GRW PK+
Sbjct  1596  GRWGPKL  1602


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -3

Query  6047  NFLSHLP---ILL  6018
             +FL +LP   +LL
Sbjct  1672  DFLGQLPHGRVLL  1684


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  1721  WNSSVPV  1727


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  179   DQVGIW  184


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  299   CTPQGDWSP  307


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  629   DQVGIW  634


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  749   CTPQGDWSP  757


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  1079  DQVGIW  1084


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4177  NQAGIWNS  4200
             +Q G+W S
Sbjct  1532  DQVGVWSS  1539


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 12/23 (52%)
 Frame = -3

Query  7232  LYI------YIIHFSNC-PSYLL  7185
             LY       YI     C P YLL
Sbjct  1825  LYLPGMTISYI-----CDPGYLL  1842


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 5/21 (23%)
 Frame = +1

Query  8941  RSTSRTADIELATRDFPLGTF  9003
             R T  T + E     FP GT+
Sbjct  12    RPTNLTDEFE-----FPIGTY  27


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1650  PSYKGRP  1670
             P Y GRP
Sbjct  34    PGYSGRP  40


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  300   TPQGDWSP  307


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  750   TPQGDWSP  757


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1200  TPQGDWSP  1207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8106  RGLWN  8120
             R LWN
Sbjct  1265  RSLWN  1269


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6641  SVEINCTR  6664
             SVE NC R
Sbjct  1406  SVEDNCRR  1413


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7278  LFALVG  7261
             LF LVG
Sbjct  1516  LFELVG  1521


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1653  TPQGDWSP  1660


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8253  LSVPSA  8236
             LSVP A
Sbjct  1801  LSVPAA  1806


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  559   LDHY  570
             LDHY
Sbjct  1859  LDHY  1862


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  549   HSSAECIL  556


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  999   HSSAECIL  1006


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  6497  STVQCT---HG  6520
             ST+ CT   HG
Sbjct  1325  STIRCTSDPHG  1335


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7839  PTIIMNNF  7816
             PTI  N+F
Sbjct  1366  PTIPINDF  1373


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  132   YQSHT-TDGHTLLE  94
             YQ HT  DG  L E
Sbjct  1505  YQCHTGPDGEQLFE  1518


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5266  GRSGSH  5283
             GRS SH
Sbjct  1706  GRSASH  1711


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6149  VSLKCTD  6169
             V LKC D
Sbjct  1893  VTLKCED  1899


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  589  SIVCIK  606
            SI+C K
Sbjct  42   SIICLK  47


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  136  RDPSDP  153
            R+P DP
Sbjct  64   RNPPDP  69


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1092  NPPIPV  1109
             NPP PV
Sbjct  65    NPPDPV  70


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2350  RLLGSS  2367
             RL GSS
Sbjct  95    RLIGSS  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  192   IIPN  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  200   PNVENG  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  351   LKGSSAS  357


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  642   IIPN  645


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  650   PNVENG  655


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  801   LKGSSAS  807


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  1092  IIPN  1095


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  1100  PNVENG  1105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             +FL +LP
Sbjct  1219  DFLGQLP  1225


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7107  EHLICP  7090
             EH  CP
Sbjct  1276  EHIFCP  1281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  1366  PTIPI  1370


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3572  VNIVTDSQY  3598
             V I TD Q+
Sbjct  1427  VHINTDTQF  1435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5890  IIDCDP  5873
             II C+P
Sbjct  1475  IISCEP  1480


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2960  LTEVI  2974
             LTE+I
Sbjct  1570  LTEII  1574


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6268  SYAC  6257
             SYAC
Sbjct  1759  SYAC  1762


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 12/36 (33%)
 Frame = -2

Query  1905  ISSNTV---SSAPVSNRASFSC--PP-I----FIVT  1828
             IS +TV      P+ +R    C  PP I    FI T
Sbjct  106   ISGDTVIWDNETPICDR--IPCGLPPTITNGDFIST  139


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8684  LPHTRLL  8704
             LPH R L
Sbjct  1224  LPHGRVL  1230


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2069  TQIGCTLNF  2095
             TQ G T N+
Sbjct  1433  TQFGSTVNY  1441


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7474  HSLGHQ  7491
             H L HQ
Sbjct  1620  HTLSHQ  1625


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2511  VSLFILGM  2488
             VSL+  GM
Sbjct  1823  VSLYLPGM  1830


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8029  GTYL  8040
             GTYL
Sbjct  25    GTYL  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8352  CHPSYS  8335
             C P YS
Sbjct  32    CRPGYS  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5419  GSQPKTACT  5445
             GSQ K  CT
Sbjct  83    GSQIKYSCT  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  325   LNGRVLFPVNL  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  425   STIRCT  430


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  467   TNASDFPI  474


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  502   SSPKDVCK  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  565   TKPP  568


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  775   LNGRVLFPVNL  785


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  875   STIRCT  880


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  917   TNASDFPI  924


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  952   SSPKDVCK  959


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  1015  TKPP  1018


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  6314  IPIDND  6331
             IPI ND
Sbjct  1368  IPI-ND  1372


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7927  PPPNP  7941
             PPP P
Sbjct  1418  PPPEP  1422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8903  PPSIS  8917
             PP IS
Sbjct  1481  PPTIS  1485


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1869  NRASF  1855
             NR SF
Sbjct  1493  NRTSF  1497


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  197   CTPPN  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  497   DNLVW  501


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  647   CTPPN  651


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  947   DNLVW  951


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  1097  CTPPN  1101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3355  SLSEI  3369
             SL EI
Sbjct  1569  SLTEI  1573


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8352  CHPSY  8338
             C PSY
Sbjct  1638  CEPSY  1642


>ref|NP_001152767.1|  adenosine deaminase domain-containing protein 1 isoform 3 [Homo 
sapiens]
Length=558

 GENE ID: 132612 ADAD1 | adenosine deaminase domain containing 1
(testis-specific) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  1241  FIEPVYI  1221
             FI+PVYI
Sbjct  387   FIQPVYI  393


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5507  PKAFVMK  5487
             PK F+MK
Sbjct  65    PKEFIMK  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2725  EVGTYH  2742
             E GTYH
Sbjct  513   EAGTYH  518


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4093  KMASK  4107
             KMASK
Sbjct  30    KMASK  34


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3238  YYAFC  3224
             Y+AFC
Sbjct  109   YFAFC  113


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1092  YLSSIL  1075
             Y SSIL
Sbjct  392   YISSIL  397


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  7105  FI-KYYRAAIN  7134
             FI KY R  IN
Sbjct  68    FIMKYKRGEIN  78


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -1

Query  8959  QFLKYSGCSS  8930
             ++LKYS  SS
Sbjct  208   EYLKYS--SS  215


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1772  YRLLLL  1755
             YR LLL
Sbjct  268   YRQLLL  273


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  2906  KSDL---PNSIS  2880
             KS L   P SIS
Sbjct  319   KSQLRLNPHSIS  330


 Score = 16.8 bits (32),  Expect(2) = 24350
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  5212  PRKMSNSFILK  5180
             P K    FI+K
Sbjct  61    PKKIPKEFIMK  71


 Score = 15.1 bits (28),  Expect(2) = 24350
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5283  MASTPAQV  5260
             MAS   QV
Sbjct  31    MASKVTQV  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 12/24 (50%)
 Frame = +2

Query  2768  PPFLWMGYELHPDKWTVQPIVLPE  2839
             PPF        P     +P+VL E
Sbjct  161   PPF--------P----AEPVVLSE  172


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 15/30 (50%)
 Frame = -1

Query  4294  LKMF--------SLI--SY-----LSYNFL  4250
             L MF        SL+   Y     L Y FL
Sbjct  425   LPMFYLVNRPHISLVPSAYPLQMNLEYKFL  454


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8462  MFFQVSR  8442
             MF+ V R
Sbjct  427   MFYLVNR  433


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3955  MATRL  3969
             MA RL
Sbjct  487   MASRL  491


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 21/44 (47%)
 Frame = +2

Query  3836  AMASDFNLPPVVAKEI-----------VASC-------DKCQLK  3913
             AM S FNL    AKE             A C        KC LK
Sbjct  495   AMLSRFNL---LAKEAKKELLEAGTYHAAKCMSASYQEAKCKLK  535


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6739  YFSYC  6725
             YF +C
Sbjct  109   YFAFC  113


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8859  MDDPEREVLE  8888
             +D+PE  +LE
Sbjct  147   LDEPEPRILE  156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3256  RSLSPYYY  3233
             RSL  Y+Y
Sbjct  261   RSLLRYFY  268


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1125  RWIILG  1142
             RW +LG
Sbjct  373   RWEVLG  378


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6401  QRIPLD  6384
             QR+ LD
Sbjct  90    QRVQLD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  368  RIRSM  382
            RI SM
Sbjct  361  RISSM  365


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  7699  LLN*RIAKPARKE  7737
             LL    AK A KE
Sbjct  502   LL----AKEAKKE  510


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 11/20 (55%)
 Frame = +3

Query  3714  KELEEMNK*IN*SVLESGKY  3773
             KEL           LE G Y
Sbjct  509   KEL-----------LEAGTY  517


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2692  SMLPYF  2675
             S+L YF
Sbjct  262   SLLRYF  267


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  936  LKETIN  953
            LK+ IN
Sbjct  298  LKQNIN  303


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7010  LCHFLQ  6993
             L HF Q
Sbjct  384   LSHFIQ  389


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2796  SILI  2807
             SILI
Sbjct  395   SILI  398


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9075  KKQLL  9061
             KK+LL
Sbjct  508   KKELL  512


>ref|NP_001164102.1|  high affinity immunoglobulin alpha and immunoglobulin mu Fc receptor 
isoform b [Homo sapiens]
Length=577

 GENE ID: 83953 FCAMR | Fc receptor, IgA, IgM, high affinity [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
 Frame = -3

Query  3098  LAPASVFLLLSLLMGHNTLHVLVLLE  3021
             LAP S  L L +LM       LVLL+
Sbjct  497   LAPVSTMLALFMLM------ALVLLQ  516


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  1415  CLMAGSSYSL  1386
             CL+ GSS+ L
Sbjct  53    CLLQGSSFAL  62


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  8549  WKTHLLLLLC  8520
             WK  L L LC
Sbjct  44    WKMPLFLILC  53


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  347  SRTH------LSPSS  321
            SRTH      L PSS
Sbjct  79   SRTHLRAMGTLRPSS  93


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  1517  LWQRRAHSQ  1543
             LW RR  SQ
Sbjct  519   LWRRRT-SQ  526


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3467  VTNRGR  3484
             VTNR R
Sbjct  334   VTNRAR  339


 Score = 18.0 bits (35),  Expect(2) = 11435
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 3/20 (15%)
 Frame = -2

Query  2061  FLPIM-LT-GVGPTNTVPIA  2008
             FL  M LT   GP  T P A
Sbjct  208   FLS-MNLTISAGPASTLPTA  226


 Score = 15.5 bits (29),  Expect(2) = 11435
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1896  NTVSSAP  1876
             +TV S P
Sbjct  263   DTVASTP  269


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4508  GE--GAVVIQ  4531
             GE  GAV IQ
Sbjct  117   GEPGGAVTIQ  126


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7272  QREEWCR  7292
             QR  WCR
Sbjct  138   QRKYWCR  144


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  6479  GP----C-TNVSTVQCTH  6517
             GP    C T VST Q TH
Sbjct  146   GPPRWICQTIVSTNQYTH  163


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1347  GPAATL  1364
             GPA TL
Sbjct  218   GPASTL  223


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6983  SNNTEG  7000
             SN TEG
Sbjct  320   SNTTEG  325


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8068  QLPPLER  8088
             QLP  ER
Sbjct  548   QLPHVER  554


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3754  CWNQES  3771
             CW +ES
Sbjct  96    CWREES  101


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8379  IQSHY  8365
             IQ HY
Sbjct  125   IQCHY  129


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7495  APGKNPG  7515
             AP  NPG
Sbjct  570   APERNPG  576


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1878  PVSNR  1864
             PV NR
Sbjct  243   PVANR  247


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5849  SSTSQGAW  5826
             S T +G W
Sbjct  320   SNTTEGVW  327


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  2278  KYW  2270
             KYW
Sbjct  140   KYW  142


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2138  LALILL  2121
             +AL+LL
Sbjct  510   MALVLL  515


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9012  ASLESPQR  8989
             ASL  P+R
Sbjct  566   ASLTAPER  573


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             +PL L+L L
Sbjct  46    MPLFLILCL  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7569  ENSFA  7583
             E SFA
Sbjct  100   ESSFA  104


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5209  RKMSN  5195
             R MSN
Sbjct  317   RSMSN  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 3/5 (60%), Gaps = 0/5 (0%)
 Frame = +1

Query  8452  WKNME  8466
             W  ME
Sbjct  436   WTSME  440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2728  PQQMLSQ  2708
             PQ  LSQ
Sbjct  461   PQATLSQ  467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8403  RRAEPAADRV  8432
             RR    A+RV
Sbjct  522   RRTSQEAERV  531


>ref|NP_001138983.1|  nuclear factor 1 A-type isoform 3 [Homo sapiens]
Length=501

 GENE ID: 4774 NFIA | nuclear factor I/A [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2084  TLNFPISPI  2110
             TL FP SPI
Sbjct  359   TLHFPTSPI  367


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query  2357  W-EVQLGIPHPAGLKK  2401
             W EV+ G P P  LKK
Sbjct  302   WHEVEPGMPSPTTLKK  317


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7848  TKPPT  7834
             TKPPT
Sbjct  448   TKPPT  452


 Score = 18.0 bits (35),  Expect(2) =  8117
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3756  LESGKYY  3776
             LES  YY
Sbjct  241   LESSSYY  247


 Score = 16.3 bits (31),  Expect(2) =  8117
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3637  IRVSQ  3651
             +RVSQ
Sbjct  221   VRVSQ  225


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  2513  PGIRYQYNVLPQ  2548
             P IRY+    PQ
Sbjct  378   PAIRYH----PQ  385


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  2088  KVQPI*VNRFLPI-ML  2044
             KV+    N FLP  ML
Sbjct  418   KVH----NPFLPTPML  429


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  430   PPPPPPP  436


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6979  FSTPST  6962
             +STPST
Sbjct  467   YSTPST  472


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5925  YFVH  5936
             YFVH
Sbjct  173   YFVH  176


 Score = 17.2 bits (33),  Expect(2) = 17595
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1127  MDNPG  1141
             MD PG
Sbjct  277   MDSPG  281


 Score = 15.5 bits (29),  Expect(2) = 17595
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1008  PGQMR  1022
             PG MR
Sbjct  251   PGAMR  255


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  7168  DLQTWRRRY  7194
             +LQ   R Y
Sbjct  24    NLQARKRKY  32


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5033  TSSINNTK  5056
             TSS   TK
Sbjct  261   TSSTSSTK  268


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7774  FVELV  7788
             FV+LV
Sbjct  391   FVQLV  395


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  3341  FVNTPPLVKLWY  3376
             FVN P     WY
Sbjct  488   FVNIPQQTQSWY  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6982  PFSTPST  6962
             P  TPST
Sbjct  353   PHATPST  359


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4196  IPYNPQ  4213
             I Y PQ
Sbjct  380   IRYHPQ  385


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8671  RISCL  8657
             RI CL
Sbjct  108   RIDCL  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  903  CL-----AWCLNLV  877
            CL      W L+LV
Sbjct  111  CLRQADKVWRLDLV  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8874  SPGHPSHA  8851
             SP +PS A
Sbjct  185   SPSQPSDA  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3792  SIPSKNST  3769
             S PS  ST
Sbjct  257   SLPSTSST  264


>ref|NP_002364.5|  microtubule-associated protein 1A [Homo sapiens]
Length=2803

 GENE ID: 4130 MAP1A | microtubule-associated protein 1A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 27/48 (56%)
 Frame = -1

Query  9052  DLRARHSP------------VPPRPRLPGKS------PAE-----SPL  8978
             DLR   SP             PPRPR    S      PAE     SP+
Sbjct  2623  DLRGKRSPTPGKGPADRASRAPPRPR----STTSQVTPAEEKDGHSPM  2666


 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
 Frame = +2

Query  4007  HVASGYIEAEVIP--AETGQ  4060
             HV   YI+ E IP   ET Q
Sbjct  731   HVS--YIQDETIPGYSETEQ  748


 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 1/17 (5%)
 Frame = -2

Query  8148  RASH-PLRPRSSTILVT  8101
             RAS  P RPRS T  VT
Sbjct  2639  RASRAPPRPRSTTSQVT  2655


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  6970  PSTIKPSTIKQ  6938
             P   KPS IKQ
Sbjct  305   PTNLKPSKIKQ  315


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1405  PGPPTP  1388
             PGPPTP
Sbjct  1861  PGPPTP  1866


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -2

Query  4371  LSPA-LYPPIPP  4339
             LSP  L PP PP
Sbjct  2448  LSPSFLNPPLPP  2459


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -2

Query  2049  MLTGVGPTNTVPIALCP  1999
             MLTG GP        CP
Sbjct  1975  MLTGLGPA-------CP  1984


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -1

Query  1417  LALWPGPPT  1391
             LAL PGPPT
Sbjct  2202  LALAPGPPT  2210


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  2117  VPVKLKPGMDGPKVKQ  2164
             VP  LKP     K+KQ
Sbjct  304   VPTNLKP----SKIKQ  315


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             ELEEM
Sbjct  657   ELEEM  661


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +1

Query  5749  ERA-EDSGNESEGEISALVEM  5808
             ERA E+     E E  A VEM
Sbjct  935   ERAVEE-----EEEETANVEM  950


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  927   WLLDVPP  907
             WL D+PP
Sbjct  1838  WLADIPP  1844


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  3997  GSSSCSQWI  4023
             GSSS S W+
Sbjct  116   GSSSYSDWV  124


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 12/39 (30%)
 Frame = +1

Query  5713  QRKIDRLIDRLIERAEDSGNESEGEI-------SALVEM  5808
             QR  +RL DR   R E    ESE E+         L EM
Sbjct  628   QREAERLPDRTEAR-E----ESEPEVKEDVIEKAELEEM  661


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  5174  EEL--KNEAVRH  5203
             E L  KNEAV +
Sbjct  1392  EALHVKNEAVKQ  1403


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  3714  KELEEMNK  3737
             K+LEE +K
Sbjct  1434  KDLEEKDK  1441


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3679  GKGLSG  3696
             GKGLSG
Sbjct  929   GKGLSG  934


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2261  YNTPVF  2278
             Y TPVF
Sbjct  958   YGTPVF  963


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 11/26 (42%)
 Frame = +2

Query  2177  EEKIKALVEICTEMEKEGKISKIGPE  2254
             EEK KAL E     +K+ KI    PE
Sbjct  1437  EEKDKAL-E-----QKD-KI----PE  1451


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +2

Query  2153  KVKQWPLTEEKIKALVE  2203
             KVK     EEK  AL E
Sbjct  1603  KVKA---MEEKLEALLE  1616


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
 Frame = -3

Query  9035  LPSPAQATPPWKVPSGKSL  8979
             LPSPA+   P   P G SL
Sbjct  2180  LPSPAE---PRSAPCG-SL  2194


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  819  KAFSPEV  839
            K F PEV
Sbjct  465  KPFTPEV  471


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7944  GDPTGP  7961
             G+PTGP
Sbjct  1106  GEPTGP  1111


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4477  LERTSKAP  4500
             LE T KAP
Sbjct  1523  LEQTDKAP  1530


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1320  LGSHFGPTR  1294
             L SH GP R
Sbjct  2150  LDSHLGPAR  2158


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +3

Query  1419  VLAEAMSQVTNSATIMMQ  1472
             VLA        S T+ MQ
Sbjct  2782  VLA-------SSSTVVMQ  2792


 Score = 16.3 bits (31),  Expect(2) =  8757
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  3373  VPVRERTH-SRS  3405
             VP RE  H  RS
Sbjct  1740  VPLRE--HATRS  1749


 Score = 16.3 bits (31),  Expect(2) =  8757
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  3477  EEDKKL--SP  3500
             EED KL  SP
Sbjct  1784  EED-KLTRSP  1792


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2063  LLTQIG  2080
             LLT+IG
Sbjct  86    LLTHIG  91


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2398  KEKIS  2412
             KEKIS
Sbjct  406   KEKIS  410


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5761  DSGNESEGE  5787
             DSG E E E
Sbjct  611   DSGAETEEE  619


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  1044  AGT---TSTLQE  1070
             AGT   TS L+E
Sbjct  892   AGTISPTSSLEE  903


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5818  SPPPS  5804
             SPPPS
Sbjct  996   SPPPS  1000


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  5815  PPP-SPQ  5798
             PPP SPQ
Sbjct  1065  PPPRSPQ  1071


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1561  LGALQF  1544
             LG LQF
Sbjct  1222  LGTLQF  1227


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4863  RYSTQVD  4883
             RYS Q D
Sbjct  1272  RYSAQTD  1278


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             EEK KAL
Sbjct  1451  EEKDKAL  1457


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             EEK KAL
Sbjct  1493  EEKDKAL  1499


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 5/19 (26%)
 Frame = -1

Query  9028  VPPR-PRLP-GKSPAESPL  8978
             VPPR P L  G SP   PL
Sbjct  2062  VPPRAPILSKGPSP---PL  2077


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6077  VLPCH  6063
             +LPCH
Sbjct  2332  ILPCH  2336


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  1685  LKKIPWPSLVGRPDL  1641
             LKKI        PDL
Sbjct  456   LKKI------SKPDL  464


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  8253  LSVPSA-TA  8230
             LSVPS  TA
Sbjct  1156  LSVPSPDTA  1164


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 13/28 (46%)
 Frame = +3

Query  7293  EKKEQ------WE*ELCSLGSWEQQEAL  7358
             EKK+Q      W      LG  +  EAL
Sbjct  1545  EKKDQALEQKYW-----ALG--QKDEAL  1565


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7152  ATMSPRSSD  7178
             AT SP  SD
Sbjct  1746  ATRSPWASD  1754


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  293   SPVAAPRLLP  264
             SP+  P L+P
Sbjct  1818  SPIPDPKLMP  1827


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  5824  APSPP-PSPQ  5798
             AP PP P P+
Sbjct  1860  APGPPTPAPE  1869


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +1

Query  3289  GNMVDRVLASHLD  3327
             G+M D +L  HL+
Sbjct  2326  GDMGDGILPCHLE  2338


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3659  IEQLIKKEKV  3688
             +E L  KEKV
Sbjct  2592  VERLREKEKV  2601


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5116  PRRPRAT  5136
             P RPR T
Sbjct  2644  PPRPRST  2650


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5852  RSSTSQ  5835
             RS TSQ
Sbjct  2648  RSTTSQ  2653


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3044  LHVLVL  3027
             L VLVL
Sbjct  2778  LNVLVL  2783


 Score = 15.9 bits (30),  Expect(2) = 14341
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7244  EPLGVAP  7264
             EPL V P
Sbjct  687   EPLKVTP  693


 Score = 15.5 bits (29),  Expect(2) = 14341
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7173  SDLEEE  7190
             SD EEE
Sbjct  667   SDEEEE  672


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2891  NSISPLT  2871
             N I PLT
Sbjct  182   NTIEPLT  188


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  9002  SREAWPGRD  9028
             SREA  GR+
Sbjct  695   SREAFGGRE  703


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -1

Query  8872  SGSSIPCRLTGCNKL  8828
             S  SI    T C+KL
Sbjct  828   SATSI----TECDKL  838


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  838   LSSFA  842


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7192  ISSSRSE  7172
             I SSR E
Sbjct  875   IPSSRTE  881


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3392  PIVGAE  3409
             PI GAE
Sbjct  1111  PILGAE  1116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +2

Query  6527  PVVS---TQLLLNGSLAEE  6574
             P VS   TQ L   SL EE
Sbjct  1187  PEVSPEDTQSL---SLSEE  1202


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8934  ALGPRDEML  8908
             ALG  DE L
Sbjct  1557  ALGQKDEAL  1565


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  801   VKVVEEK  821
             VK  EEK
Sbjct  1604  VKAMEEK  1610


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SPP SP
Sbjct  1797  SPPASP  1802


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +3

Query  1686  SRPE------PTAPPEES  1721
             S PE      P AP +ES
Sbjct  1801  SPPEMVGQRVPSAPGQES  1818


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 8/25 (32%)
 Frame = -1

Query  5860  STTD-------HQHP-KEHGAPSPP  5810
             ST D        ++P KE   PSPP
Sbjct  2104  STSDSELEKGAREQPEKEAQSPSPP  2128


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  855   ALSEGA-----TP  878
             ALSEG      TP
Sbjct  2254  ALSEGSSSEATTP  2266


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8514  LEAQEEE  8534
             LEA E+E
Sbjct  2279  LEAAEQE  2285


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  8923  WPESCIRSTSR  8955
             WPE   RS SR
Sbjct  2393  WPEGAERS-SR  2402


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6471  LNVLLL  6454
             LNVL L
Sbjct  2778  LNVLVL  2783


 Score = 15.1 bits (28),  Expect(2) = 23412
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9181  EALKA  9167
             E LKA
Sbjct  321   ESLKA  325


 Score = 15.1 bits (28),  Expect(2) = 23412
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  96   EALKA  82
            E LKA
Sbjct  321  ESLKA  325


 Score = 15.1 bits (28),  Expect(2) = 23412
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9132  LAREL  9118
             LA EL
Sbjct  352   LAKEL  356


 Score = 15.1 bits (28),  Expect(2) = 23412
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  47   LAREL  33
            LA EL
Sbjct  352  LAKEL  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +3

Query  615  IK---DTKEAL  638
            IK   D KE L
Sbjct  313  IKQRADSKESL  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +3

Query  8517  EAQEEEEVGFPVTPQV  8564
             EA EE E      P+V
Sbjct  639   EAREESE------PEV  648


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/20 (35%), Positives = 9/20 (45%), Gaps = 10/20 (50%)
 Frame = -3

Query  1208  FLWSL----------SYVQN  1179
             FL SL          SY+Q+
Sbjct  718   FLSSLTTPAGATEHVSYIQD  737


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             +EEEE
Sbjct  940   EEEEE  944


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8329  DFAIRW  8346
             D AI W
Sbjct  1337  DIAIKW  1342


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1582  VERKDT  1599
             VE KDT
Sbjct  1380  VEPKDT  1385


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6678  QEKESVSRED  6707
             QE ES   ED
Sbjct  1579  QEQESLVQED  1588


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1925  KPKM  1936
             KPKM
Sbjct  1592  KPKM  1595


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2180  EKIKALVE  2203
             EK+KA+ E
Sbjct  1602  EKVKAMEE  1609


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2180  EKIKAL  2197
             EK KAL
Sbjct  1616  EKTKAL  1621


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5494  TKALG  5508
             TKALG
Sbjct  1618  TKALG  1622


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2450  PLDEDFRK  2473
             PL  D+RK
Sbjct  1904  PLGKDYRK  1911


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3620  QPDQSESE  3643
             +P+Q E E
Sbjct  1945  EPEQTEPE  1952


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  19    RSEPGSSL  42
             R EPG S+
Sbjct  2046  RPEPGPSM  2053


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  9104  RSEPGSSL  9127
             R EPG S+
Sbjct  2046  RPEPGPSM  2053


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             EVT  PS
Sbjct  2219  EVTKAPS  2225


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1283  DDRNL  1297
             DDR+L
Sbjct  2462  DDRDL  2466


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9036  TPQSRPGH  9013
             T + RPGH
Sbjct  2551  THHPRPGH  2558


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4520  VVIQDNS  4540
             VV QD S
Sbjct  2789  VVMQDES  2795


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  615  IKDTKE  632
            +KD KE
Sbjct  206  VKDSKE  211


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5117  PEDQG  5131
             PE+QG
Sbjct  600   PEEQG  604


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8205  TALFFSS  8185
             T LF SS
Sbjct  715   TSLFLSS  721


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  907   WGDIK  921
             WGD K
Sbjct  1030  WGDTK  1034


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             P EDC
Sbjct  2353  PSEDC  2357


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2435  HHPHP  2421
             HHP P
Sbjct  2552  HHPRP  2556


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4515  PSPF  4504
             PSPF
Sbjct  18    PSPF  21


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = +1

Query  5779  EGEIS--------ALV  5802
             E EIS        ALV
Sbjct  236   EAEISVPYLTSITALV  251


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6852  KIIVLLFP  6829
             KI+  LFP
Sbjct  261   KIVRVLFP  268


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  3136  KSENRKICKN  3165
             K E RK  K+
Sbjct  389   KAEKRKLIKD  398


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6218  EKGEIK  6235
             EK EIK
Sbjct  419   EKKEIK  424


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4844  HRMEEKE  4864
             H M EKE
Sbjct  588   HVMKEKE  594


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  1868  LDTGADDTVLEE  1903
             LD GA +T  EE
Sbjct  610   LDSGA-ET--EE  618


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2878  GEIELGK  2898
             GE  LGK
Sbjct  1228  GELNLGK  1234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8445  RDLE  8456
             RDLE
Sbjct  1413  RDLE  1416


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  2389  RV--KKEKI  2409
             RV   KEKI
Sbjct  1483  RVLEQKEKI  1491


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8445  RDLE  8456
             RDLE
Sbjct  1521  RDLE  1524


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1617  ERQANFL  1637
             ER+  FL
Sbjct  1724  ERESTFL  1730


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1779  PCLS  1768
             PCLS
Sbjct  1998  PCLS  2001


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  9037  HSPVPPRP  9014
             +SP PP P
Sbjct  2123  QSPSPPHP  2130


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8053  EPVPLQLP  8076
             +P P QLP
Sbjct  2174  QPAPPQLP  2181


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  937   NICMA  923
             ++CMA
Sbjct  2576  DVCMA  2580


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7775  NLPIYLIP  7752
             NL + LIP
Sbjct  2750  NLQVTLIP  2757


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1149  KIVR  1160
             KIVR
Sbjct  261   KIVR  264


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8452  RSRDA  8438
             RSR+A
Sbjct  694   RSREA  698


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4810  EKET  4821
             EKET
Sbjct  712   EKET  715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +3

Query  7644  TRPGWSGTEKLTI  7682
             T PG S TE  TI
Sbjct  739   TIPGYSETEQ-TI  750


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5907  FHTGT  5893
             FHT T
Sbjct  768   FHTST  772


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2168  PLTEE  2182
             PL EE
Sbjct  819   PLAEE  823


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PS PPS
Sbjct  999   PSGPPS  1004


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3019  DSKRT  3033
             D KRT
Sbjct  1032  DTKRT  1036


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3506  DTTNQ  3520
             DT NQ
Sbjct  1162  DTANQ  1166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  7582  ANEFSRATP  7556
             A  FS  TP
Sbjct  1290  ASSFSHSTP  1298


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8925  PRDEML  8908
             P DE L
Sbjct  1362  PKDEVL  1367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8249  DRVIE  8263
             DRV E
Sbjct  1482  DRVLE  1486


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3958  PYSWTT  3941
             P+SW T
Sbjct  1875  PFSWGT  1880


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1000  GPAC  989
             GPAC
Sbjct  1980  GPAC  1983


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7442  PSANCSA  7422
             PS +C A
Sbjct  2353  PSEDCAA  2359


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8095  LDCNED  8112
             LD +ED
Sbjct  2531  LDSDED  2536


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P P PSP
Sbjct  2566  PDPRPSP  2572


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7418  QQQNNLL  7438
             QQQ N L
Sbjct  2775  QQQLNVL  2781


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5409  EASRK  5423
             +ASRK
Sbjct  147   DASRK  151


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  290  VSTPKILTSG  319
            V T K L SG
Sbjct  293  VATQKDLASG  302


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8173  VLESGTKE  8196
             V E G KE
Sbjct  340   VVEEGAKE  347


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2308  EKIS  2319
             EKIS
Sbjct  407   EKIS  410


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1585  ERKDTK  1602
             E KD K
Sbjct  439   EKKDAK  444


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1584  GKEGHQMKD  1610
             G E H MK+
Sbjct  584   GQEEHVMKE  592


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  807  VVEEKAFSPEV  839
            V  EK   PEV
Sbjct  589  VMKEKELVPEV  599


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2735  LTTP  2746
             LTTP
Sbjct  722   LTTP  725


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9012  ASLESPQ  8992
             ASL  PQ
Sbjct  852   ASLTAPQ  858


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1196  LSYVQNAG  1173
             L YV  AG
Sbjct  886   LDYVPSAG  893


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4939  ESEK  4928
             ESEK
Sbjct  920   ESEK  923


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8870  GERSV  8884
             GER V
Sbjct  934   GERAV  938


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2710  ETTSVE  2727
             ET  VE
Sbjct  944   ETANVE  949


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6247  QYQHK  6261
             QY HK
Sbjct  1179  QYLHK  1183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  1103  DRW  1095
             DRW
Sbjct  1184  DRW  1186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1886  DTVLEE  1903
             DT LE+
Sbjct  1419  DTALEQ  1424


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             E+K KAL
Sbjct  1423  EQKDKAL  1429


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1886  DTVLEE  1903
             DT LE+
Sbjct  1461  DTALEQ  1466


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2177  EEKIKAL  2197
             E+K KAL
Sbjct  1465  EQKDKAL  1471


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8520  AQEEEE  8537
             A E+EE
Sbjct  1633  AREQEE  1638


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +3

Query  8382  PTVRERMRRAEPA  8420
             PT RE     EPA
Sbjct  1655  PT-RE-----EPA  1661


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8849  PAWD  8860
             PAW+
Sbjct  1669  PAWE  1672


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1868  LDTGADD  1888
             LD G DD
Sbjct  1730  LDEGPDD  1736


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  190   EQGPESERE  216
             ++GP+ E E
Sbjct  1731  DEGPDDEQE  1739


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = -1

Query  6877  WVPS*GLLKD  6848
             WVP     KD
Sbjct  1845  WVP-----KD  1849


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  836   SDTHVFS  856
             SDT  FS
Sbjct  2028  SDTPTFS  2034


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1098  PIPVG  1112
             PIP G
Sbjct  2130  PIPMG  2134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  9035  LPSP  9024
             LPSP
Sbjct  2233  LPSP  2236


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4480  ERTSKAP  4500
             +R S AP
Sbjct  2638  DRASRAP  2644


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2604  LLENKIQ  2624
             LLE K Q
Sbjct  2740  LLEGKAQ  2746


>ref|NP_543006.2|  signal-regulatory protein gamma isoform 2 precursor [Homo sapiens]
Length=170

 GENE ID: 55423 SIRPG | signal-regulatory protein gamma [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3080  FLLLSLLMG  3054
             FLLL LL+G
Sbjct  14    FLLLTLLLG  22


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  2866  TEVSGEIEL  2892
             TEV GE EL
Sbjct  24    TEVAGEEEL  32


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 20/46 (43%)
 Frame = +2

Query  5825  TMLLGM--------L-MICSATEK-LWVTVYYGVPVWKEATTTLFC  5932
             T+LLG+        L MI    EK L VTV  G    K  T TL C
Sbjct  18    TLLLGLTEVAGEEELQMI--QPEKLLLVTV--G----K--TATLHC  53


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2144  PFLALILL  2121
             PFL L LL
Sbjct  13    PFLLLTLL  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2716  TSVEVGTY  2739
             T  +VGTY
Sbjct  110   TPADVGTY  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6279  RKNMHFFI  6302
             R NM F I
Sbjct  97    RNNMDFSI  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8329  DFAIR  8343
             DF IR
Sbjct  101   DFSIR  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  579  VATLYCV  599
            V T YCV
Sbjct  114  VGTYYCV  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7109  SNITGLLL  7132
             S  T LLL
Sbjct  147   SSLTALLL  154


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4310  PFVLL  4296
             PF LL
Sbjct  13    PFLLL  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1796  FPQVT  1810
             FP VT
Sbjct  85    FPRVT  89


>ref|NP_061026.2|  signal-regulatory protein gamma isoform 1 precursor [Homo sapiens]
Length=387

 GENE ID: 55423 SIRPG | signal-regulatory protein gamma [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3080  FLLLSLLMG  3054
             FLLL LL+G
Sbjct  14    FLLLTLLLG  22


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  2866  TEVSGEIEL  2892
             TEV GE EL
Sbjct  24    TEVAGEEEL  32


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 20/46 (43%)
 Frame = +2

Query  5825  TMLLGM--------L-MICSATEK-LWVTVYYGVPVWKEATTTLFC  5932
             T+LLG+        L MI    EK L VTV  G    K  T TL C
Sbjct  18    TLLLGLTEVAGEEELQMI--QPEKLLLVTV--G----K--TATLHC  53


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  2942  LRGTKALTEVI  2974
             LRGT  L E I
Sbjct  238   LRGTANLSEAI  248


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2144  PFLALILL  2121
             PFL L LL
Sbjct  13    PFLLLTLL  20


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8938  IRSTSR  8955
             IRST R
Sbjct  207   IRSTAR  212


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2716  TSVEVGTY  2739
             T  +VGTY
Sbjct  110   TPADVGTY  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V+LTC+
Sbjct  325   VVLTCQ  330


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6279  RKNMHFFI  6302
             R NM F I
Sbjct  97    RNNMDFSI  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8329  DFAIR  8343
             DF IR
Sbjct  101   DFSIR  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  579  VATLYCV  599
            V T YCV
Sbjct  114  VGTYYCV  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7109  SNITGLLL  7132
             S  T LLL
Sbjct  364   SSLTALLL  371


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7365  APIVL  7351
             AP+VL
Sbjct  148   APVVL  152


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4052  TGQETAY  4072
             TGQ  AY
Sbjct  199   TGQSVAY  205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3824  CDISHV  3807
             C++ HV
Sbjct  226   CEVAHV  231


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             VN TC
Sbjct  267   VNVTC  271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4310  PFVLL  4296
             PF LL
Sbjct  13    PFLLL  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1796  FPQVT  1810
             FP VT
Sbjct  85    FPRVT  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  468  RIVLAP  451
            R+VL P
Sbjct  212  RVVLDP  217


>ref|NP_060111.2|  kinesin-like protein KIF21A isoform 2 [Homo sapiens]
Length=1661

 GENE ID: 55605 KIF21A | kinesin family member 21A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -3

Query  7937  LGGGSETIMV  7908
             LGG S+TIM+
Sbjct  336   LGGNSQTIMI  345


 Score = 21.0 bits (42),  Expect(2) =   559
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  7139  DGGNSNNESE  7168
             DGG S +ES+
Sbjct  612   DGGESSDESD  621


 Score = 18.0 bits (35),  Expect(2) =   559
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = +1

Query  7171  LQTWRRRYEGQLEK  7212
             LQT    YE   EK
Sbjct  658   LQTLKKQYE---EK  668


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 12/28 (42%)
 Frame = +2

Query  4229  ESMNKELKKIIGQVRDQA---EH---LK  4294
             + MNKEL         QA   EH   LK
Sbjct  713   QAMNKELQRL------QAAQKEHARLLK  734


 Score = 18.9 bits (37),  Expect(2) =  1079
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2699  IEELRQHLL  2725
             IE+LR  LL
Sbjct  486   IEDLRAKLL  494


 Score = 18.9 bits (37),  Expect(2) =  1079
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2754  NIRKNL  2771
             N RKNL
Sbjct  502   NLRKNL  507


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8867  PGERSVRVEV  8896
             P E SVRV V
Sbjct  5     PDESSVRVAV  14


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6060  FHMLK  6046
             FHMLK
Sbjct  1071  FHMLK  1075


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  428  KTYSMG  445
            KTY MG
Sbjct  94   KTYTMG  99


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3743  YLLVHFL  3723
             YLL HFL
Sbjct  1026  YLLDHFL  1032


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7679  NYTSLI  7696
             NYTSL+
Sbjct  1384  NYTSLV  1389


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8145  PSNIGGIS  8168
             PS IG IS
Sbjct  1205  PSKIGSIS  1212


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1985  VSDHTVLL  1962
             V DH VLL
Sbjct  1580  VPDHPVLL  1587


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2551  MERITSNI  2574
             ME  T NI
Sbjct  976   MESLTANI  983


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4812  LLYAD  4798
             LLYAD
Sbjct  1150  LLYAD  1154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/27 (33%), Positives = 9/27 (33%), Gaps = 16/27 (59%)
 Frame = +1

Query  8935  CIR----------------STSRTADI  8967
             CIR                STSRT  I
Sbjct  1408  CIRTLTSSGQVTLGDACSASTSRTVAI  1434


 Score = 17.6 bits (34),  Expect(2) =  7668
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2399  KKKSV  2413
             KKKSV
Sbjct  555   KKKSV  559


 Score = 15.9 bits (30),  Expect(2) =  7668
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2284  KEKR  2295
             KEKR
Sbjct  551   KEKR  554


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 16/43 (37%)
 Frame = +2

Query  6569  EEEVVIRSVN--FTDNAKTIIVQLNTSVEINCTRPNNNTRKRI  6691
             +EE V  S+N  F +NA      L T  E      NNN R RI
Sbjct  411   DEEGVE-SINDMFHENAM-----LQT--E------NNNLRVRI  439


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1263  KLARLLE  1243
             KL RLL+
Sbjct  327   KLTRLLQ  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1449  NSATIM  1466
             NS TIM
Sbjct  339   NSQTIM  344


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8601  LSHFLKEKGGL  8633
             L H LKEK  L
Sbjct  1070  LFHMLKEKAEL  1080


 Score = 17.2 bits (33),  Expect(2) = 10921
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3635  ESELVNQIIEQLIK  3676
             ESE VN   E L K
Sbjct  495   ESEAVN---ENLRK  505


 Score = 15.5 bits (29),  Expect(2) = 10921
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +2

Query  3653  QII-------EQLIKKEK  3685
             +II       E L  KEK
Sbjct  536   EIIDLAKKDLEKLKRKEK  553


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2261  YNTPVFA  2281
             YN  VFA
Sbjct  80    YNATVFA  86


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -1

Query  8431  TLSA-------AGSARL  8402
             TL A       AGS RL
Sbjct  265   TLTAKFHFVDLAGSERL  281


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4426  YKNSKFSGLLQ  4458
             Y +SK   LLQ
Sbjct  323   YRDSKLTRLLQ  333


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1514  ETLNNL  1497
             ETLN L
Sbjct  357   ETLNTL  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5952  MIQRYI  5969
             MI+ YI
Sbjct  478   MIHSYI  483


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2282  WQILE  2268
             WQ LE
Sbjct  910   WQLLE  914


 Score = 16.3 bits (31),  Expect(2) = 18167
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7051  AESRKSNV  7074
             A S KSN+
Sbjct  168   AKSKKSNI  175


 Score = 15.1 bits (28),  Expect(2) = 18167
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7154  NNESE  7168
             N ESE
Sbjct  196   NTESE  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2004  CPQI  1993
             CPQI
Sbjct  240   CPQI  243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -1

Query  9136  LVSQ-RAPR----LRSGLTR  9092
             +V Q RA      LRS  TR
Sbjct  376   MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -2

Query  51   LVSQ-RAPR----LRSGLTR  7
            +V Q RA      LRS  TR
Sbjct  376  MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE +E +EV
Sbjct  586   LEVEESQEV  594


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  5193  LLDIFLGFGSM  5225
             LLD FL   SM
Sbjct  1027  LLDHFL---SM  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  930   QMLKE  944
             +MLKE
Sbjct  1072  HMLKE  1076


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SPP SP
Sbjct  1258  SPPSSP  1263


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PS PPS
Sbjct  1260  PSSPPS  1265


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2865  MSLTV-QLSFSG  2833
             M LTV Q S SG
Sbjct  1483  MCLTVDQIS-SG  1493


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4268  VRDQAEH  4288
             V DQA H
Sbjct  457   VSDQANH  463


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3772  YFPDSST  3752
             YF  SST
Sbjct  516   YFSGSST  522


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  562  LSSSD  548
            LSSSD
Sbjct  839  LSSSD  843


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7606  SIPRHSS  7586
             SI R+SS
Sbjct  1210  SISRQSS  1216


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4984  HLGLTMC  4964
             HLG  MC
Sbjct  1478  HLGPVMC  1484


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  593  IEGC  582
            IEGC
Sbjct  25   IEGC  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5525  RSGDSDEE  5548
             R G+ +EE
Sbjct  467   RAGEGNEE  474


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4278  RLNILRQQY  4304
             RL  L  QY
Sbjct  657   RLQTLKKQY  665


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5091  LTEDRWN  5111
             LTE R N
Sbjct  773   LTESRRN  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8618  RKGGTGR  8638
             RKG TGR
Sbjct  893   RKGLTGR  899


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2662  YIQIIHVLID  2633
             YIQ I  LI+
Sbjct  65    YIQCIEKLIE  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6472  IERLI  6458
             IE LI
Sbjct  69    IEKLI  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2173  DRRKNKSI  2196
             + RK KS+
Sbjct  552   EKRKKKSV  559


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7293  EKKEQ  7307
             EKKE+
Sbjct  571   EKKEE  575


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3626  DQSESE  3643
             D+S+SE
Sbjct  618   DESDSE  623


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8518  KHKRRRR  8538
             K K RRR
Sbjct  1137  KNKARRR  1143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  8665  ISLICGSTTH  8694
             I  IC   TH
Sbjct  1616  INAICVNSTH  1625


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5323  ELGVDIA  5343
             +LG DIA
Sbjct  1653  DLGEDIA  1659


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5967  CTSV  5956
             CTSV
Sbjct  31    CTSV  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7174  EDLGLI  7157
             E+LG I
Sbjct  109   EELGII  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5302  LLQNS  5288
             LLQ+S
Sbjct  331   LLQDS  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = +2

Query  7418  QQQNNLLRA-IEAQQ  7459
             Q +NN LR  I A Q
Sbjct  429   QTENNNLRVRIKAMQ  443


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9055  QDLRA  9041
             +DLRA
Sbjct  487   EDLRA  491


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  190  RAPLLE  173
            RA LLE
Sbjct  490  RAKLLE  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2157  TFGPSI  2140
             TF P I
Sbjct  522   TFSPTI  527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5940  MLKHMI  5957
             ML H I
Sbjct  671   MLQHKI  676


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4406  KELQ  4417
             KELQ
Sbjct  717   KELQ  720


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6572  EEVVIR  6589
             +EVV R
Sbjct  806   QEVVLR  811


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4329  LKEKGGL  4349
             LKEK  L
Sbjct  1074  LKEKAEL  1080


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  955   RKLQNG  972
             R LQ+G
Sbjct  1641  RNLQDG  1646


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8834  VTPCEP  8851
             VTP EP
Sbjct  34    VTPGEP  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  194  RDLKAKGK  217
            RD  AK K
Sbjct  164  RDIDAKSK  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7822  IHNDS  7836
             IH DS
Sbjct  177   IHEDS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  6700  ERTRESI  6720
             ER  E I
Sbjct  289   ERAKEGI  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  537  LQTGSEELR  563
            LQT    LR
Sbjct  428  LQTENNNLR  436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3115  NLSRA  3129
             NL RA
Sbjct  506   NLTRA  510


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4241  KELKK  4255
             K+LKK
Sbjct  741   KQLKK  745


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9035  LPSPA  9021
             LP PA
Sbjct  879   LPTPA  883


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3103  MDISNL  3120
             M ISN+
Sbjct  925   MTISNM  930


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6381  ACVMTE  6364
             AC +TE
Sbjct  1018  ACTLTE  1023


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7645  HDLDGV  7662
             +DLD V
Sbjct  1093  QDLDSV  1098


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = +2

Query  6665  PNNNTRKR  6688
             P N  R R
Sbjct  1136  PKNKARRR  1143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7268  KAKRR  7282
             KA RR
Sbjct  1139  KARRR  1143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5116  PRRPR  5130
             P RPR
Sbjct  1264  PSRPR  1268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  194   CSGATAR  174
             CS  T R
Sbjct  1424  CSASTSR  1430


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8265  TSITLSVPS  8239
             TS T  +PS
Sbjct  1428  TSRTVAIPS  1436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2320  RFQRT  2334
             RFQ T
Sbjct  1468  RFQST  1472


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  4708  DITMKALIQE  4737
             D T K L Q+
Sbjct  1556  DLTQKDLLQQ  1565


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1104  PVGE  1115
             PVGE
Sbjct  1605  PVGE  1608


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             DL E+I
Sbjct  1653  DLGEDI  1658


>ref|NP_000642.3|  complement receptor type 1 isoform S precursor [Homo sapiens]
Length=2489

 GENE ID: 1378 CR1 | complement component (3b/4b) receptor 1 (Knops blood group)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1688  LHCTPQGDWSP  1698


 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  2141  LHCTPQGDWSP  2151


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  229   APQCIIPNKC  238


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  679   APQCIIPNKC  688


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  1129  APQCIIPNKC  1138


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  1579  APQCIIPNKC  1588


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
 Frame = -3

Query  7565  SNPKSPGAVDPLGIFPQPGFLP  7500
             S P SP  V P    P PG LP
Sbjct  4     SSPRSPEPVGP----PAPG-LP  20


 Score = 18.5 bits (36),  Expect(2) =  1447
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  363   GQLLNGRVLFPVNLQLGAKVDFVC  386


 Score = 18.5 bits (36),  Expect(2) =  1447
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  409   WNSSVPV  415


 Score = 18.5 bits (36),  Expect(2) =  1447
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  813   GQLLNGRVLFPVNLQLGAKVDFVC  836


 Score = 18.5 bits (36),  Expect(2) =  1447
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  859   WNSSVPV  865


 Score = 18.5 bits (36),  Expect(2) =  1447
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  1263  GQLLNGRVLFPVNLQLGAKVDFVC  1286


 Score = 18.5 bits (36),  Expect(2) =  1447
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  1309  WNSSVPV  1315


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7605  LVGVINLWN  7631
             LVG   LWN
Sbjct  1752  LVGMRSLWN  1760


 Score = 19.3 bits (38),  Expect(2) =  3148
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  5928  NRVVVASFHTGT  5893
             NR    SFH GT
Sbjct  1984  NR---TSFHNGT  1992


 Score = 15.9 bits (30),  Expect(2) =  3148
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5818  SPPP  5807
             SPPP
Sbjct  2030  SPPP  2033


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1663  QDNFS  1667


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  2116  QDNFS  2120


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  1112  SYWDRWIICHPSYL  1071
             SY     IC P YL
Sbjct  2324  SY-----ICDPGYL  2332


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  3773  LFLDGIDKAQDEHEK---YH  3823
             LF++GI K   E E    YH
Sbjct  2363  LFMNGISK---ELEMKKVYH  2379


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1358  SRWSQC  1341
             S WSQC
Sbjct  2397  SPWSQC  2402


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  8684  LPHTR-LLP  8707
             LPH R LLP
Sbjct  2168  LPHGRVLLP  2176


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  512   DFPIGT  517


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  523   CRPEY  527


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  962   DFPIGT  967


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  973   CRPEY  977


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  1412  DFPIGT  1417


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  1423  CRPEY  1427


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7309  GNRSF  7323
             GNRSF
Sbjct  2054  GNRSF  2058


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  283   PPLASCRAR  257
             PPLA C  R
Sbjct  2410  PPLAKCTSR  2418


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7842  PPTIIMNNFI  7813
             PPTI   +FI
Sbjct  169   PPTITNGDFI  178


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  292  SCSRVCQPPPDV  303


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  742  SCSRVCQPPPDV  753


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526   SCPSICLQPSDV  491
             SC  +C  P DV
Sbjct  1192  SCSRVCQPPPDV  1203


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3713  CVLVPM  3696
             CVLV M
Sbjct  1750  CVLVGM  1755


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3204  SVNCFTSLVW  3175
             S+ C   LVW
Sbjct  1886  SISCLENLVW  1895


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1916  GRWKPKM  1936
             GRW PK+
Sbjct  2087  GRWGPKL  2093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -3

Query  6047  NFLSHLP---ILL  6018
             +FL +LP   +LL
Sbjct  2163  DFLGQLPHGRVLL  2175


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  2212  WNSSVPV  2218


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8044  RSAEPV  8061
             RS EPV
Sbjct  7     RSPEPV  12


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1692  PEPTAPP  1712
             PEP  PP
Sbjct  9     PEPVGPP  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8643  LALPV  8629
             LALPV
Sbjct  34    LALPV  38


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  220   DQVGIW  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  340   CTPQGDWSP  348


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  670   DQVGIW  675


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  790   CTPQGDWSP  798


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  1120  DQVGIW  1125


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  1240  CTPQGDWSP  1248


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  1570  DQVGIW  1575


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4177  NQAGIWNS  4200
             +Q G+W S
Sbjct  2023  DQVGVWSS  2030


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 12/23 (52%)
 Frame = -3

Query  7232  LYI------YIIHFSNC-PSYLL  7185
             LY       YI     C P YLL
Sbjct  2316  LYLPGMTISYI-----CDPGYLL  2333


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2341  ENSRLL  2358
             ENSR L
Sbjct  2483  ENSRVL  2488


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 5/21 (23%)
 Frame = +1

Query  8941  RSTSRTADIELATRDFPLGTF  9003
             R T  T + E     FP GT+
Sbjct  53    RPTNLTDEFE-----FPIGTY  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1650  PSYKGRP  1670
             P Y GRP
Sbjct  75    PGYSGRP  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  341   TPQGDWSP  348


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  791   TPQGDWSP  798


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1241  TPQGDWSP  1248


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1691  TPQGDWSP  1698


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8106  RGLWN  8120
             R LWN
Sbjct  1756  RSLWN  1760


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6641  SVEINCTR  6664
             SVE NC R
Sbjct  1897  SVEDNCRR  1904


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7278  LFALVG  7261
             LF LVG
Sbjct  2007  LFELVG  2012


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  2144  TPQGDWSP  2151


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8253  LSVPSA  8236
             LSVP A
Sbjct  2292  LSVPAA  2297


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  559   LDHY  570
             LDHY
Sbjct  2350  LDHY  2353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  590   HSSAECIL  597


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  1040  HSSAECIL  1047


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  1490  HSSAECIL  1497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  6497  STVQCT---HG  6520
             ST+ CT   HG
Sbjct  1816  STIRCTSDPHG  1826


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7839  PTIIMNNF  7816
             PTI  N+F
Sbjct  1857  PTIPINDF  1864


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  132   YQSHT-TDGHTLLE  94
             YQ HT  DG  L E
Sbjct  1996  YQCHTGPDGEQLFE  2009


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5266  GRSGSH  5283
             GRS SH
Sbjct  2197  GRSASH  2202


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6149  VSLKCTD  6169
             V LKC D
Sbjct  2384  VTLKCED  2390


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  589  SIVCIK  606
            SI+C K
Sbjct  83   SIICLK  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  136  RDPSDP  153
            R+P DP
Sbjct  105  RNPPDP  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1092  NPPIPV  1109
             NPP PV
Sbjct  106   NPPDPV  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2350  RLLGSS  2367
             RL GSS
Sbjct  136   RLIGSS  141


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  233   IIPN  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  241   PNVENG  246


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  392   LKGSSAS  398


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  683   IIPN  686


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  691   PNVENG  696


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  842   LKGSSAS  848


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  1133  IIPN  1136


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  1141  PNVENG  1146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  1292  LKGSSAS  1298


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  1583  IIPN  1586


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  1591  PNVENG  1596


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             +FL +LP
Sbjct  1710  DFLGQLP  1716


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7107  EHLICP  7090
             EH  CP
Sbjct  1767  EHIFCP  1772


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  1857  PTIPI  1861


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3572  VNIVTDSQY  3598
             V I TD Q+
Sbjct  1918  VHINTDTQF  1926


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5890  IIDCDP  5873
             II C+P
Sbjct  1966  IISCEP  1971


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2960  LTEVI  2974
             LTE+I
Sbjct  2061  LTEII  2065


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6268  SYAC  6257
             SYAC
Sbjct  2250  SYAC  2253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2420  VLLLIF  2403
             +LL IF
Sbjct  2435  ILLIIF  2440


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 12/36 (33%)
 Frame = -2

Query  1905  ISSNTV---SSAPVSNRASFSC--PP-I----FIVT  1828
             IS +TV      P+ +R    C  PP I    FI T
Sbjct  147   ISGDTVIWDNETPICDR--IPCGLPPTITNGDFIST  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8684  LPHTRLL  8704
             LPH R L
Sbjct  1715  LPHGRVL  1721


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2069  TQIGCTLNF  2095
             TQ G T N+
Sbjct  1924  TQFGSTVNY  1932


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7474  HSLGHQ  7491
             H L HQ
Sbjct  2111  HTLSHQ  2116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2511  VSLFILGM  2488
             VSL+  GM
Sbjct  2314  VSLYLPGM  2321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  7272  ALVGATPNGSIF  7237
             AL+  T  G IF
Sbjct  2422  ALIVGTLSGTIF  2433


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  1165  YILTILFNPRII  1130
             +IL I F   II
Sbjct  2434  FILLIIFLSWII  2445


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5704  ILRQRK  5721
             IL +RK
Sbjct  2445  ILKHRK  2450


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8029  GTYL  8040
             GTYL
Sbjct  66    GTYL  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8352  CHPSYS  8335
             C P YS
Sbjct  73    CRPGYS  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5419  GSQPKTACT  5445
             GSQ K  CT
Sbjct  124   GSQIKYSCT  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  366   LNGRVLFPVNL  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  466   STIRCT  471


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  508   TNASDFPI  515


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  543   SSPKDVCK  550


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  606   TKPP  609


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  816   LNGRVLFPVNL  826


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  916   STIRCT  921


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  958   TNASDFPI  965


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  993   SSPKDVCK  1000


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  1056  TKPP  1059


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  1266  LNGRVLFPVNL  1276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  1366  STIRCT  1371


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  1408  TNASDFPI  1415


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  1443  SSPKDVCK  1450


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  1506  TKPP  1509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  6314  IPIDND  6331
             IPI ND
Sbjct  1859  IPI-ND  1863


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7927  PPPNP  7941
             PPP P
Sbjct  1909  PPPEP  1913


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8903  PPSIS  8917
             PP IS
Sbjct  1972  PPTIS  1976


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1869  NRASF  1855
             NR SF
Sbjct  1984  NRTSF  1988


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  238   CTPPN  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  538   DNLVW  542


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  688   CTPPN  692


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  988   DNLVW  992


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  1138  CTPPN  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  1438  DNLVW  1442


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  1588  CTPPN  1592


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8352  CHPSY  8338
             C PSY
Sbjct  2129  CEPSY  2133


>ref|NP_000564.2|  complement receptor type 1 isoform F precursor [Homo sapiens]
Length=2039

 GENE ID: 1378 CR1 | complement component (3b/4b) receptor 1 (Knops blood group)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1238  LHCTPQGDWSP  1248


 Score = 24.8 bits (51),  Expect =   125
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4364  LHCTPQ---SP  4341
             LHCTPQ   SP
Sbjct  1691  LHCTPQGDWSP  1701


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  229   APQCIIPNKC  238


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  679   APQCIIPNKC  688


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -1

Query  8056  APQ-IVPDKC  8030
             APQ I+P+KC
Sbjct  1129  APQCIIPNKC  1138


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
 Frame = -3

Query  7565  SNPKSPGAVDPLGIFPQPGFLP  7500
             S P SP  V P    P PG LP
Sbjct  4     SSPRSPEPVGP----PAPG-LP  20


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  363   GQLLNGRVLFPVNLQLGAKVDFVC  386


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  409   WNSSVPV  415


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = -3

Query  4499  GALL---VL--------SKVDFCC  4461
             G LL   VL         KVDF C
Sbjct  813   GQLLNGRVLFPVNLQLGAKVDFVC  836


 Score = 18.5 bits (36),  Expect(2) =  1532
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  859   WNSSVPV  865


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7605  LVGVINLWN  7631
             LVG   LWN
Sbjct  1302  LVGMRSLWN  1310


 Score = 19.3 bits (38),  Expect(2) =  3389
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  5928  NRVVVASFHTGT  5893
             NR    SFH GT
Sbjct  1534  NR---TSFHNGT  1542


 Score = 15.9 bits (30),  Expect(2) =  3389
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5818  SPPP  5807
             SPPP
Sbjct  1580  SPPP  1583


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1213  QDNFS  1217


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3997  QDNFS  3983
             QDNFS
Sbjct  1666  QDNFS  1670


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  1112  SYWDRWIICHPSYL  1071
             SY     IC P YL
Sbjct  1874  SY-----ICDPGYL  1882


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  3773  LFLDGIDKAQDEHEK---YH  3823
             LF++GI K   E E    YH
Sbjct  1913  LFMNGISK---ELEMKKVYH  1929


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1358  SRWSQC  1341
             S WSQC
Sbjct  1947  SPWSQC  1952


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  8684  LPHTR-LLP  8707
             LPH R LLP
Sbjct  1718  LPHGRVLLP  1726


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  512   DFPIGT  517


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  523   CRPEY  527


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8983  DFPLGT  9000
             DFP GT
Sbjct  962   DFPIGT  967


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4804  CRPQY  4790
             CRP+Y
Sbjct  973   CRPEY  977


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7309  GNRSF  7323
             GNRSF
Sbjct  1604  GNRSF  1608


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  283   PPLASCRAR  257
             PPLA C  R
Sbjct  1960  PPLAKCTSR  1968


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7842  PPTIIMNNFI  7813
             PPTI   +FI
Sbjct  169   PPTITNGDFI  178


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  292  SCSRVCQPPPDV  303


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  526  SCPSICLQPSDV  491
            SC  +C  P DV
Sbjct  742  SCSRVCQPPPDV  753


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3713  CVLVPM  3696
             CVLV M
Sbjct  1300  CVLVGM  1305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3204  SVNCFTSLVW  3175
             S+ C   LVW
Sbjct  1436  SISCLENLVW  1445


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1916  GRWKPKM  1936
             GRW PK+
Sbjct  1637  GRWGPKL  1643


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -3

Query  6047  NFLSHLP---ILL  6018
             +FL +LP   +LL
Sbjct  1713  DFLGQLPHGRVLL  1725


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4474  WISAVPV  4454
             W S VPV
Sbjct  1762  WNSSVPV  1768


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8044  RSAEPV  8061
             RS EPV
Sbjct  7     RSPEPV  12


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1692  PEPTAPP  1712
             PEP  PP
Sbjct  9     PEPVGPP  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8643  LALPV  8629
             LALPV
Sbjct  34    LALPV  38


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  220   DQVGIW  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  340   CTPQGDWSP  348


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  670   DQVGIW  675


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  4358  CTPQ---SP  4341
             CTPQ   SP
Sbjct  790   CTPQGDWSP  798


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4177  NQAGIW  4194
             +Q GIW
Sbjct  1120  DQVGIW  1125


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4177  NQAGIWNS  4200
             +Q G+W S
Sbjct  1573  DQVGVWSS  1580


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 12/23 (52%)
 Frame = -3

Query  7232  LYI------YIIHFSNC-PSYLL  7185
             LY       YI     C P YLL
Sbjct  1866  LYLPGMTISYI-----CDPGYLL  1883


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2341  ENSRLL  2358
             ENSR L
Sbjct  2033  ENSRVL  2038


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 5/21 (23%)
 Frame = +1

Query  8941  RSTSRTADIELATRDFPLGTF  9003
             R T  T + E     FP GT+
Sbjct  53    RPTNLTDEFE-----FPIGTY  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1650  PSYKGRP  1670
             P Y GRP
Sbjct  75    PGYSGRP  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  341   TPQGDWSP  348


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  791   TPQGDWSP  798


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1241  TPQGDWSP  1248


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8106  RGLWN  8120
             R LWN
Sbjct  1306  RSLWN  1310


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6641  SVEINCTR  6664
             SVE NC R
Sbjct  1447  SVEDNCRR  1454


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7278  LFALVG  7261
             LF LVG
Sbjct  1557  LFELVG  1562


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5843  TSQGAWCP  5820
             T QG W P
Sbjct  1694  TPQGDWSP  1701


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8253  LSVPSA  8236
             LSVP A
Sbjct  1842  LSVPAA  1847


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  559   LDHY  570
             LDHY
Sbjct  1900  LDHY  1903


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  590   HSSAECIL  597


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6179  HSSNQCTL  6156
             HSS +C L
Sbjct  1040  HSSAECIL  1047


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  6497  STVQCT---HG  6520
             ST+ CT   HG
Sbjct  1366  STIRCTSDPHG  1376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7839  PTIIMNNF  7816
             PTI  N+F
Sbjct  1407  PTIPINDF  1414


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  132   YQSHT-TDGHTLLE  94
             YQ HT  DG  L E
Sbjct  1546  YQCHTGPDGEQLFE  1559


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5266  GRSGSH  5283
             GRS SH
Sbjct  1747  GRSASH  1752


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6149  VSLKCTD  6169
             V LKC D
Sbjct  1934  VTLKCED  1940


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  589  SIVCIK  606
            SI+C K
Sbjct  83   SIICLK  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  136  RDPSDP  153
            R+P DP
Sbjct  105  RNPPDP  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1092  NPPIPV  1109
             NPP PV
Sbjct  106   NPPDPV  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2350  RLLGSS  2367
             RL GSS
Sbjct  136   RLIGSS  141


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  233   IIPN  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  241   PNVENG  246


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  392   LKGSSAS  398


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  683   IIPN  686


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  691   PNVENG  696


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1067  LKGTSSS  1047
             LKG S S
Sbjct  842   LKGSSAS  848


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4588  IIPN  4577
             IIPN
Sbjct  1133  IIPN  1136


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5330  PNSENG  5313
             PN ENG
Sbjct  1141  PNVENG  1146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             +FL +LP
Sbjct  1260  DFLGQLP  1266


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7107  EHLICP  7090
             EH  CP
Sbjct  1317  EHIFCP  1322


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  1407  PTIPI  1411


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3572  VNIVTDSQY  3598
             V I TD Q+
Sbjct  1468  VHINTDTQF  1476


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5890  IIDCDP  5873
             II C+P
Sbjct  1516  IISCEP  1521


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2960  LTEVI  2974
             LTE+I
Sbjct  1611  LTEII  1615


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6268  SYAC  6257
             SYAC
Sbjct  1800  SYAC  1803


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2420  VLLLIF  2403
             +LL IF
Sbjct  1985  ILLIIF  1990


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 12/36 (33%)
 Frame = -2

Query  1905  ISSNTV---SSAPVSNRASFSC--PP-I----FIVT  1828
             IS +TV      P+ +R    C  PP I    FI T
Sbjct  147   ISGDTVIWDNETPICDR--IPCGLPPTITNGDFIST  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8684  LPHTRLL  8704
             LPH R L
Sbjct  1265  LPHGRVL  1271


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2069  TQIGCTLNF  2095
             TQ G T N+
Sbjct  1474  TQFGSTVNY  1482


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7474  HSLGHQ  7491
             H L HQ
Sbjct  1661  HTLSHQ  1666


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2511  VSLFILGM  2488
             VSL+  GM
Sbjct  1864  VSLYLPGM  1871


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  7272  ALVGATPNGSIF  7237
             AL+  T  G IF
Sbjct  1972  ALIVGTLSGTIF  1983


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  1165  YILTILFNPRII  1130
             +IL I F   II
Sbjct  1984  FILLIIFLSWII  1995


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5704  ILRQRK  5721
             IL +RK
Sbjct  1995  ILKHRK  2000


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8029  GTYL  8040
             GTYL
Sbjct  66    GTYL  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8352  CHPSYS  8335
             C P YS
Sbjct  73    CRPGYS  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5419  GSQPKTACT  5445
             GSQ K  CT
Sbjct  124   GSQIKYSCT  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  366   LNGRVLFPVNL  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  466   STIRCT  471


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  508   TNASDFPI  515


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  543   SSPKDVCK  550


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  606   TKPP  609


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7026  LHGRVI--VSL  7000
             L GRV   V L
Sbjct  816   LNGRVLFPVNL  826


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6497  STVQCT  6514
             ST+ CT
Sbjct  916   STIRCT  921


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7787  TNSTNLPI  7764
             TN  + PI
Sbjct  958   TNASDFPI  965


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6109  SKPKAMCK  6132
             S PK  CK
Sbjct  993   SSPKDVCK  1000


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7848  TKPP  7837
             TKPP
Sbjct  1056  TKPP  1059


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  6314  IPIDND  6331
             IPI ND
Sbjct  1409  IPI-ND  1413


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7927  PPPNP  7941
             PPP P
Sbjct  1459  PPPEP  1463


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8903  PPSIS  8917
             PP IS
Sbjct  1522  PPTIS  1526


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1869  NRASF  1855
             NR SF
Sbjct  1534  NRTSF  1538


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  238   CTPPN  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  538   DNLVW  542


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  688   CTPPN  692


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2635  DNYVW  2621
             DN VW
Sbjct  988   DNLVW  992


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6656  CTRPN  6670
             CT PN
Sbjct  1138  CTPPN  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8352  CHPSY  8338
             C PSY
Sbjct  1679  CEPSY  1683


>ref|NP_005876.2|  E3 ubiquitin-protein ligase MARCH6 [Homo sapiens]
Length=910

 GENE ID: 10299 MARCH6 | membrane-associated ring finger (C3HC4) 6
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
 Frame = +2

Query  5408  GSIQEVSLKLLVPIAIVKSV  5467
             GSI  V L L  PI I+KSV
Sbjct  488   GSI--VLLMLWLPIRIIKSV  505


 Score = 21.4 bits (43),  Expect(2) =   156
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4909  ICITLTVF  4932
             IC TL VF
Sbjct  650   ICLTLPVF  657


 Score = 20.2 bits (40),  Expect(2) =   156
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4906  FICITL  4923
             F CITL
Sbjct  639   FMCITL  644


 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/19 (52%), Positives = 12/19 (63%), Gaps = 4/19 (21%)
 Frame = +3

Query  3243  GERLLNLNCPYKRKHGKHG  3299
             G+RL N    Y RK GK+G
Sbjct  885   GQRLVN----YERKSGKQG  899


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 18/34 (52%)
 Frame = -2

Query  3234  MLS-------------VVIFCTASVNC-FTSLVW  3175
             MLS             VV  CT    C F SLVW
Sbjct  133   MLSTENLLADCLQGCFVVT-CTL---CAFISLVW  162


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  8517  EAQEEEE  8537
             +A+EEEE
Sbjct  228   QAEEEEE  234


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +2

Query  7652  W--MEWDR  7669
             W  +EWDR
Sbjct  260   WNALEWDR  267


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2153  KVKQWPL  2173
             KVK+W L
Sbjct  709   KVKEWSL  715


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4455  TGTAEIH  4475
             TGTA IH
Sbjct  667   TGTAKIH  673


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = -3

Query  3083  VFLLLSLLMGHNTLHVLV  3030
             VF   SL    NTL +LV
Sbjct  290   VFWVVSL----NTLFILV  303


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8720  VLLIREV  8700
             +LL REV
Sbjct  439   ILLLREV  445


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  966  EWDR  977
            EWDR
Sbjct  264  EWDR  267


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7363  RSLNDAD  7383
             R LND D
Sbjct  455   RNLNDPD  461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  758  LPLDVL  741
            LPLD L
Sbjct  129  LPLDML  134


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1495  LWFL  1484
             LWFL
Sbjct  451   LWFL  454


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 16/31 (51%)
 Frame = -2

Query  4866  ISFSSILWRLPDPNASLFLLYADPNMLLLPI  4774
             I F SI            LL     ML LPI
Sbjct  485   IVFGSIV-----------LL-----MLWLPI  499


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5288  LLWLP  5274
             +LWLP
Sbjct  494   MLWLP  498


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  1943  PLSFLVSIFL  1914
             PL F   IFL
Sbjct  626   PLNFPLRIFL  635


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  873  WLLLIMLKT  847
            W L+IM KT
Sbjct  713  WSLMIM-KT  720


 Score = 16.8 bits (32),  Expect(2) = 11641
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4717  MKALI  4731
             MK LI
Sbjct  718   MKTLI  722


 Score = 16.3 bits (31),  Expect(2) = 11641
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4605  VMIVW  4619
             VM+ W
Sbjct  694   VMVAW  698


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2127  FTGTVS  2110
             FTG VS
Sbjct  119   FTGSVS  124


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 3/19 (15%)
 Frame = -2

Query  2517  PGVSLFI---LGMVNAVYF  2470
             PG  +F     GMV   YF
Sbjct  417   PGTTMFLHWLVGMVYVFYF  435


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7281  LLFALV  7264
             LLF LV
Sbjct  737   LLFELV  742


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +3

Query  3819  ITVIGEQ-WL--VI  3851
             IT  G Q WL  VI
Sbjct  776   ITLMGPQWWLKTVI  789


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3032  VLLESLC  3012
             VLL SLC
Sbjct  816   VLLLSLC  822


 Score = 16.8 bits (32),  Expect(2) = 13953
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 17/32 (53%)
 Frame = -3

Query  6827  IVLLIC*L--------SVLKC-----YSILLY  6771
             IVLL   L        SVL       Y ++LY
Sbjct  490   IVLLM--LWLPIRIIKSVL--PNFLPYNVMLY  517


 Score = 15.9 bits (30),  Expect(2) = 13953
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6774  LLMLQ  6760
             LL+LQ
Sbjct  529   LLLLQ  533


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1228  TGSIK  1242
             TGSIK
Sbjct  29    TGSIK  33


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3617  AQPDQSESE  3643
             AQ DQ E E
Sbjct  224   AQDDQAEEE  232


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6427  GTIMYGNWL  6401
             GT M+  WL
Sbjct  418   GTTMFLHWL  426


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7293  LCTTLLFA  7270
             +C TLL A
Sbjct  640   MCITLLIA  647


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8633  QSPLFF  8616
             Q PLF+
Sbjct  753   QTPLFY  758


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4349  QSPLFF  4332
             Q PLF+
Sbjct  753   QTPLFY  758


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5818  SPPPSPQ  5798
             S PP PQ
Sbjct  900   SSPPPPQ  906


 Score = 15.9 bits (30),  Expect(2) = 23727
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4318  EYCHL  4304
             EYC L
Sbjct  50    EYCEL  54


 Score = 15.5 bits (29),  Expect(2) = 23727
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  4355  TPQSPLF  4335
             TP+ PL+
Sbjct  17    TPEKPLY  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8201  HYSLV  8187
             HY LV
Sbjct  95    HYTLV  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1622  SLSTIFHLV  1596
             SL T F LV
Sbjct  295   SLNTLFILV  303


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -3

Query  767  MYHLPLDVLHYR  732
            M HLP     YR
Sbjct  468  MIHLPI----YR  475


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3231  LSVVIF  3214
             LSV++F
Sbjct  482   LSVIVF  487


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4335  LLKLWM  4318
             LL LW+
Sbjct  492   LLMLWL  497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLL LL
Sbjct  733   LLLGLL  738


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6398  RIPLD  6384
             R+PLD
Sbjct  748   RVPLD  752


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  280  PLASCR  263
            PL  CR
Sbjct  108  PLTACR  113


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  226  LLWFPFR  206
            +LW P R
Sbjct  494  MLWLPIR  500


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3093  PCFCISAIK  3067
             PC C   IK
Sbjct  25    PCVCTGSIK  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3266  LPIQ  3277
             LPIQ
Sbjct  73    LPIQ  76


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5115  ACSIY  5101
             AC IY
Sbjct  111   ACRIY  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8600  IYSCL  8586
             IY CL
Sbjct  114   IYKCL  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8440  AAPTLSAAG  8414
             AAP   AAG
Sbjct  179   AAPPFNAAG  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3235  YAFCGY  3218
             +AFC Y
Sbjct  304   FAFCPY  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5004  YVLLDI  4987
             Y+LL I
Sbjct  340   YILLAI  345


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4615  TIITCH  4598
             T I CH
Sbjct  346   TLIICH  351


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6753  CLIFPIF  6733
             CL  P+F
Sbjct  651   CLTLPVF  657


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7656  WSGTEK  7673
             W GT K
Sbjct  666   WTGTAK  671


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2447  VPLDE  2461
             VPLD+
Sbjct  749   VPLDQ  753


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5250  LMGIL  5264
             LM IL
Sbjct  859   LMAIL  863


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  5818  SPPP--SPQ  5798
             SPPP  S Q
Sbjct  901   SPPPPQSSQ  909


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5980  HTCLCT  5997
             H C CT
Sbjct  24    HPCVCT  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2756  HQKEPP  2773
             HQ E P
Sbjct  189   HQNEAP  194


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4300  CCLKMF  4283
             C L MF
Sbjct  397   CSLEMF  402


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5789  YQHLWR  5806
             Y HL R
Sbjct  474   YRHLRR  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 6/16 (37%)
 Frame = +2

Query  3596  YALGIIQAQPDQSESE  3643
             Y LG      DQ E E
Sbjct  569   YLLG------DQEENE  578


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QEE E
Sbjct  574   QEENE  578


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1238  IEPVY  1224
             IE VY
Sbjct  789   IEQVY  793


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  991   MQGLLH  1008
             MQ L H
Sbjct  841   MQNLVH  846


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6251  ISTSIR  6268
             I T IR
Sbjct  86    IGTAIR  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  989   ACRAY  1003
             ACR Y
Sbjct  111   ACRIY  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5833  EHGAP  5819
             EH AP
Sbjct  177   EHAAP  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6827  IVLLIC  6810
             I L IC
Sbjct  345   ITLIIC  350


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5420  EVSLKLL  5440
             E SL LL
Sbjct  524   ELSLELL  530


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1260  ASQEVKN  1280
             A Q+V N
Sbjct  581   ANQQVNN  587


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3161  LHIFL  3147
             L IFL
Sbjct  631   LRIFL  635


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7400  LLSGIV  7417
             LL G+V
Sbjct  726   LLAGVV  731


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5828  MLLGML  5845
             +LLG+L
Sbjct  733   LLLGLL  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2420  VLLLIFSF  2397
             VL+ I SF
Sbjct  858   VLMAILSF  865


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7844  LVGLRIV  7864
             LVG R V
Sbjct  883   LVGQRLV  889


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9128  PESSQ  9114
             P+SSQ
Sbjct  905   PQSSQ  909


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  43   PESSQ  29
            P+SSQ
Sbjct  905  PQSSQ  909


>sp|Q8WWV6.1|FCAMR_HUMAN  RecName: Full=High affinity immunoglobulin alpha and immunoglobulin 
mu Fc receptor; AltName: Full=Fc alpha/mu receptor; Flags: 
Precursor
 gb|AAL51154.1|  Fc alpha/mu receptor [Homo sapiens]
Length=532

 GENE ID: 83953 FCAMR | Fc receptor, IgA, IgM, high affinity [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 6/26 (23%)
 Frame = -3

Query  3098  LAPASVFLLLSLLMGHNTLHVLVLLE  3021
             LAP S  L L +LM       LVLL+
Sbjct  452   LAPVSTMLALFMLM------ALVLLQ  471


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  1415  CLMAGSSYSL  1386
             CL+ GSS+ L
Sbjct  8     CLLQGSSFAL  17


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  347  SRTH------LSPSS  321
            SRTH      L PSS
Sbjct  34   SRTHLRAMGTLRPSS  48


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  1517  LWQRRAHSQ  1543
             LW RR  SQ
Sbjct  474   LWRRRT-SQ  481


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3467  VTNRGR  3484
             VTNR R
Sbjct  289   VTNRAR  294


 Score = 18.0 bits (35),  Expect(2) = 11746
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 3/20 (15%)
 Frame = -2

Query  2061  FLPIM-LT-GVGPTNTVPIA  2008
             FL  M LT   GP  T P A
Sbjct  163   FLS-MNLTISAGPASTLPTA  181


 Score = 15.5 bits (29),  Expect(2) = 11746
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1896  NTVSSAP  1876
             +TV S P
Sbjct  218   DTVASTP  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4508  GE--GAVVIQ  4531
             GE  GAV IQ
Sbjct  72    GEPGGAVTIQ  81


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7272  QREEWCR  7292
             QR  WCR
Sbjct  93    QRKYWCR  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  6479  GP----C-TNVSTVQCTH  6517
             GP    C T VST Q TH
Sbjct  101   GPPRWICQTIVSTNQYTH  118


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1347  GPAATL  1364
             GPA TL
Sbjct  173   GPASTL  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6983  SNNTEG  7000
             SN TEG
Sbjct  275   SNTTEG  280


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8068  QLPPLER  8088
             QLP  ER
Sbjct  503   QLPHVER  509


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3754  CWNQES  3771
             CW +ES
Sbjct  51    CWREES  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8379  IQSHY  8365
             IQ HY
Sbjct  80    IQCHY  84


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7495  APGKNPG  7515
             AP  NPG
Sbjct  525   APERNPG  531


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1878  PVSNR  1864
             PV NR
Sbjct  198   PVANR  202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5849  SSTSQGAW  5826
             S T +G W
Sbjct  275   SNTTEGVW  282


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  2278  KYW  2270
             KYW
Sbjct  95    KYW  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2138  LALILL  2121
             +AL+LL
Sbjct  465   MALVLL  470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9012  ASLESPQR  8989
             ASL  P+R
Sbjct  521   ASLTAPER  528


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             +PL L+L L
Sbjct  1     MPLFLILCL  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7569  ENSFA  7583
             E SFA
Sbjct  55    ESSFA  59


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5209  RKMSN  5195
             R MSN
Sbjct  272   RSMSN  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 3/5 (60%), Gaps = 0/5 (0%)
 Frame = +1

Query  8452  WKNME  8466
             W  ME
Sbjct  391   WTSME  395


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2728  PQQMLSQ  2708
             PQ  LSQ
Sbjct  416   PQATLSQ  422


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8403  RRAEPAADRV  8432
             RR    A+RV
Sbjct  477   RRTSQEAERV  486


>sp|Q15399.3|TLR1_HUMAN  RecName: Full=Toll-like receptor 1; AltName: Full=Toll/interleukin-1 
receptor-like protein; Short=TIL; AltName: CD_antigen=CD281; 
Flags: Precursor
Length=786

 GENE ID: 7096 TLR1 | toll-like receptor 1 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 5/23 (21%)
 Frame = +3

Query  2289  KKTVLNGEN**ISENLIRELKTS  2357
             K T+LN     IS+N I EL TS
Sbjct  46    KTTILN-----ISQNYISELWTS  63


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +2

Query  5246  ETYGDTWAGVEAIIRILQ  5299
             ET   TW      IRILQ
Sbjct  255   ET---TW---NSFIRILQ  266


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -2

Query  6786  FHFA---LLMLQ  6760
             FHFA   +L LQ
Sbjct  5     FHFAIIFMLILQ  16


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  5355  TRQRRARN  5378
             TR RRARN
Sbjct  619   TR-RRARN  625


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -3

Query  2372  LIELPRSLEF----SY  2337
             L EL R L+F    SY
Sbjct  628   LEELQRNLQFHAFISY  643


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5200  SNSFILKLL  5174
             SNS IL LL
Sbjct  723   SNSLILILL  731


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = -2

Query  2262  YGFSGP---IFEIFPSFSI  2215
             +GF  P   I+EIF    I
Sbjct  312   FGF--PQSYIYEIFSNMNI  328


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  3804  MNMRNITV  3827
             MN  N TV
Sbjct  326   MNIKNFTV  333


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  3050  NTLHVLVLLE  3021
             N L +L+LLE
Sbjct  724   NSL-ILILLE  732


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1173  TSILDIRQ  1196
             T IL+I Q
Sbjct  47    TTILNISQ  54


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4687  FPETYI  4670
             FP+ YI
Sbjct  314   FPQSYI  319


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3074  LLSLLMGHNTL  3042
             LLSL M  N L
Sbjct  425   LLSLNMSSNIL  435


 Score = 17.6 bits (34),  Expect(2) = 12315
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3786  PSKNSTFL  3763
             PSK S FL
Sbjct  344   PSKISPFL  351


 Score = 15.5 bits (29),  Expect(2) = 12315
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3855  LKSLAI  3838
             LK L I
Sbjct  299   LKALSI  304


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6052  VKIFCH  6035
             VKI CH
Sbjct  106   VKISCH  111


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  289  GEYAKNFD  312
            GE+ KN D
Sbjct  533  GEFVKNID  540


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  7004  DTI--TLPCRIK  7033
             DTI   LP RIK
Sbjct  437   DTIFRCLPPRIK  448


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6481  SCSIERLIIT  6452
             SC I  LI+T
Sbjct  576   SCNITLLIVT  585


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5922  LYFVHQ  5939
             LYF H+
Sbjct  711   LYFAHH  716


 Score = 16.3 bits (31),  Expect(2) = 21149
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3933  CPCMASPF  3910
             CP   SPF
Sbjct  343   CPSKISPF  350


 Score = 15.5 bits (29),  Expect(2) = 21149
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3903  HLSQLAT  3883
             HL +L T
Sbjct  370   HLTELET  376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7896  LTLFTIEST  7870
             LTL  IE T
Sbjct  249   LTLNNIETT  257


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7232  VVKIEPL  7252
             VVK E L
Sbjct  464   VVKLEAL  470


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +3

Query  507  RQI-LGQLQPSLQ  542
            R I L +LQ  LQ
Sbjct  624  RNIPLEELQRNLQ  636


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5162  LELLEEL  5182
             LE L+EL
Sbjct  467   LEALQEL  473


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  735  IVQNI  749
            IV+NI
Sbjct  679  IVENI  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8033  LIWDDLR  8053
             L W +LR
Sbjct  767   LFWANLR  773


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6178  ILQI  6167
             ILQI
Sbjct  14    ILQI  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2170  IDRRKN  2187
             +DR KN
Sbjct  29    VDRSKN  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/26 (26%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
 Frame = +2

Query  6032  NVTENF--NMWKNDMVEQMHEDIISL  6103
             N+ +N+   +W  D        I SL
Sbjct  51    NISQNYISELWTSD--------ILSL  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6740  GNMRQ  6754
             GNM Q
Sbjct  136   GNMSQ  140


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1165  YILTIL  1148
             Y L IL
Sbjct  232   YFLSIL  237


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1045  QELLVPF  1065
             QEL V F
Sbjct  471   QELNVAF  477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1279  FFTSCE  1262
             FF SC+
Sbjct  509   FFQSCQ  514


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2216  MEKEG  2230
             +EKEG
Sbjct  659   LEKEG  663


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5360  TEESKK  5377
             TE+ KK
Sbjct  781   TEQAKK  786


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4791  MLLLPI  4774
             ML L I
Sbjct  12    MLILQI  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7853  LRIVF  7867
             L IVF
Sbjct  192   LHIVF  196


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1508  LNNLSL  1491
             L NL L
Sbjct  246   LSNLTL  251


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 13/28 (46%)
 Frame = +2

Query  7583  TTAVPWNASWSNKS----LEQIWNHTTW  7654
             TT   WN      S    L+ +W  T W
Sbjct  256   TT---WN------SFIRILQLVWHTTVW  274


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6617  TIIVQLN  6637
             T I Q+N
Sbjct  376   TLILQMN  382


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3575  NIVTD  3589
             NI TD
Sbjct  433   NILTD  437


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3500  LTDT  3511
             LTDT
Sbjct  435   LTDT  438


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1786  YSSLSI  1769
             +SSLS+
Sbjct  489   FSSLSV  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4753  CTSEL  4739
             CT EL
Sbjct  528   CTCEL  532


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  870  LLLIML  853
            L LI+L
Sbjct  726  LILILL  731


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5088  KLTE  5099
             KLTE
Sbjct  779   KLTE  782


>ref|NP_002903.3|  DNA polymerase zeta catalytic subunit [Homo sapiens]
Length=3130

 GENE ID: 5980 REV3L | REV3-like, catalytic subunit of DNA polymerase zeta
(yeast) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3116  IYQEPF  3133
             IYQEPF
Sbjct  1903  IYQEPF  1908


 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  8260  YNPICPLSYC  8231
             ++PIC L YC
Sbjct  2318  FDPICALFYC  2327


 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -2

Query  8289  IALQAPCTT  8263
             IALQAP TT
Sbjct  2075  IALQAP-TT  2082


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5766  TVFCSFY  5746
             T FCSFY
Sbjct  1655  TGFCSFY  1661


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5110  TSPRRPR  5130
             TSPR PR
Sbjct  1578  TSPRKPR  1584


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  9100  LTRETQYR  9077
             LTR  QYR
Sbjct  2555  LTRGSQYR  2562


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8422  QIGWEQ  8439
             QI WEQ
Sbjct  1469  QIAWEQ  1474


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3412  GFCSYY  3395
             GFCS+Y
Sbjct  1656  GFCSFY  1661


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 9/26 (34%)
 Frame = -3

Query  254   QQAESCV-ERAPL----VS----LSL  204
             QQAE C  E   L    VS    LSL
Sbjct  1765  QQAEDCLSEKSRLNRSSVSKEVFLSL  1790


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 12/26 (46%)
 Frame = +1

Query  8926  PESCIRSTS------------RTADI  8967
             P+S  RSTS            RTA+I
Sbjct  1852  PDSSPRSTSSPSQSKNGSFTPRTANI  1877


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  4164  QAALTVAPVK  4135
             Q  LT APVK
Sbjct  24    QSPLTQAPVK  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  1794  TSLRSLFGNDPSS  1832
             T L SLF   PSS
Sbjct  730   TALSSLF---PSS  739


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  5988  PVYPQTPTHKK  6020
             P+YP TP  KK
Sbjct  1036  PIYPLTP--KK  1044


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  1410  KARVLAEAMSQ  1442
             K R L EA SQ
Sbjct  1492  KPRSLSEAISQ  1502


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -1

Query  7198  PHI----SSSRSE  7172
             P I    SSSRSE
Sbjct  3013  PRIHKATSSSRSE  3025


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
 Frame = +3

Query  8529  EEEVGFP-VTPQVP  8567
             EE++  P VT QVP
Sbjct  663   EEDI--PSVTRQVP  674


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8511  WLEAQEE  8531
             WL+A EE
Sbjct  2009  WLQAKEE  2015


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = -2

Query  4869  YISFSSILWRLPD  4831
             YIS+SS     PD
Sbjct  2114  YISYSS-----PD  2121


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  3196  LFYIISVGTP  3167
             LFY IS  TP
Sbjct  2324  LFYCISSDTP  2333


 Score = 18.9 bits (37),  Expect(2) =  3484
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2171  LTEEK  2185
             LTEEK
Sbjct  1006  LTEEK  1010


 Score = 17.6 bits (34),  Expect(2) =  3484
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  583   QPSIVC  600
             +PS+VC
Sbjct  1319  HPSVVC  1324


 Score = 17.2 bits (33),  Expect(2) =  3484
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  708   SN---QVSQN  728
             SN   QV QN
Sbjct  1362  SNHLSQVAQN  1371


 Score = 15.9 bits (30),  Expect(2) =  3484
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2176  RRKNK  2190
             RRK K
Sbjct  1047  RRKSK  1051


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  8266  YFYNP-----ICPL  8240
             Y YNP     IC L
Sbjct  126   YLYNPTMVKRICEL  139


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1095  DYLSSI  1078
             +YLSSI
Sbjct  1392  NYLSSI  1397


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 7/17 (41%)
 Frame = +2

Query  2042  VNIIGRNLLTQIGCTLN  2092
             +NI+GR     I  TLN
Sbjct  2456  INIVGR-----I--TLN  2465


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3680  EKVYL  3694
             EKVYL
Sbjct  2821  EKVYL  2825


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3201  QRQCKK  3218
             QRQC K
Sbjct  2891  QRQCMK  2896


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6146  CVSLKC  6163
             CVSL C
Sbjct  3099  CVSLNC  3104


 Score = 17.6 bits (34),  Expect(2) =  4995
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4286  VQPDLL  4269
             V PDLL
Sbjct  2655  VPPDLL  2660


 Score = 16.3 bits (31),  Expect(2) =  4995
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4359  LYPPI  4345
             LYP I
Sbjct  2618  LYPSI  2622


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  250   KP--SPASRE  227
             KP  SP SRE
Sbjct  1879  KPLMSPPSRE  1888


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8717  ELHTRAR  8737
             ELH R R
Sbjct  2303  ELHARTR  2309


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  269   LPCALQ  252
             LPC LQ
Sbjct  2825  LPCVLQ  2830


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = +1

Query  6535  INSTAVKWQSSRRRGSN  6585
             IN  AVK    RR  SN
Sbjct  175   INLAAVKFRKARRK-SN  190


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
 Frame = -2

Query  7449  SIALSKLFCCCTIPDN---NC--LAC  7387
             S ALS LF     P     NC  L C
Sbjct  729   STALSSLF-----PSSFTENCELLSC  749


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/25 (40%), Positives = 10/25 (40%), Gaps = 13/25 (52%)
 Frame = +1

Query  6475  NRTMYKCQHSTMYTWN*ASSINSTA  6549
             NRTM    HS           NSTA
Sbjct  753   NRTMV---HS----------LNSTA  764


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 10/28 (35%)
 Frame = +2

Query  605   KDRDKRHQ-------GSFRQDRGRAKQK  667
             K R+KR Q       G       RAKQK
Sbjct  1189  KKRNKRNQTNKLVDDG---KKKPRAKQK  1213


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  8139  HPLRPRSSTIL  8107
             HPL  RS  I+
Sbjct  1749  HPLTTRSNSIM  1759


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3424  IYIEGFCS  3401
             IY E FCS
Sbjct  1903  IYQEPFCS  1910


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6447  RIAKP  6433
             RIAKP
Sbjct  2569  RIAKP  2573


 Score = 16.3 bits (31),  Expect(2) =  8398
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  1642  RSGLPTREGQGI  1677
             R G P R GQG+
Sbjct  1964  RPGSPLRSGQGV  1975


 Score = 16.3 bits (31),  Expect(2) =  8398
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  1706  PTRRELQVW  1732
             P R   QVW
Sbjct  2001  PSRQLVQVW  2009


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8102  VTRIVELL  8125
             V RI ELL
Sbjct  133   VKRICELL  140


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = +3

Query  2466  SGSIL---------HLPYL  2495
             SG I+         H PYL
Sbjct  142   SGAIMNKFYQPHEAHIPYL  160


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  7830  IMNNFIYH  7807
             IMN F Y+
Sbjct  145   IMNKF-YQ  151


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3772  TIFRW  3786
             T FRW
Sbjct  210   TLFRW  214


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  9047  QILHISSC  9070
             +IL +SSC
Sbjct  648   EILPVSSC  655


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -1

Query  2812  PFIRMEFITHPKE  2774
             PFI M    HP E
Sbjct  689   PFIHMH--RHPNE  699


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  3857  LPPVVAKEIV  3886
             LPPV+ K I+
Sbjct  971   LPPVIIKYII  980


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3910  KRRSHA  3927
             K RSHA
Sbjct  1078  KKRSHA  1083


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8729  RARGQI  8746
             RAR QI
Sbjct  1169  RARAQI  1174


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7339  GSSRKH  7356
             G SRKH
Sbjct  1218  GTSRKH  1223


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2171  LTEEKIK  2191
             L +EKIK
Sbjct  1226  LKDEKIK  1232


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2659  IQIIHVL  2639
             IQ  HVL
Sbjct  2549  IQFLHVL  2555


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8071  LPPLER  8088
             LPPL R
Sbjct  2991  LPPLAR  2996


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2908  VNLTCPIQF  2882
             V L CP+ F
Sbjct  3100  VSLNCPVLF  3108


 Score = 16.3 bits (31),  Expect(2) = 13631
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2305  MEKISRF  2325
             ME  SRF
Sbjct  2599  MEPESRF  2605


 Score = 15.1 bits (28),  Expect(2) = 13631
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2408  SVTVLD  2425
             SV VLD
Sbjct  2609  SVLVLD  2614


 Score = 16.3 bits (31),  Expect(2) = 13632
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1083  MTNNP  1097
             MT NP
Sbjct  1959  MTQNP  1963


 Score = 15.1 bits (28),  Expect(2) = 13632
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1149  KIVRM  1163
             KIV M
Sbjct  1991  KIVIM  1995


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  6085  MHLFYHVIFP  6056
             +HL  H IFP
Sbjct  52    LHL--HGIFP  59


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  6616  NHNSTAEHI  6642
             N  STA+H+
Sbjct  93    NPSSTAQHV  101


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7338  WEQQE  7352
             WEQ E
Sbjct  214   WEQDE  218


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5083  TLGKGGFIF  5057
             TLGK  F F
Sbjct  701   TLGKNSFNF  709


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8568  LRPMTYK  8588
             L P TYK
Sbjct  814   LSPVTYK  820


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +3

Query  1767  PIDKELYPLT  1796
             PI    YPLT
Sbjct  1036  PI----YPLT  1041


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3880  NSSQL  3894
             NSSQL
Sbjct  1608  NSSQL  1612


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7870  CTFYS  7884
             C FYS
Sbjct  1658  CSFYS  1662


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = +1

Query  8431  WEQ-HLETWKNMEQS  8472
             W Q H  T K M QS
Sbjct  1798  WIQGH--TRKEMGQS  1810


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1281  NFLPPVK  1261
             NFL P+K
Sbjct  2159  NFLKPIK  2165


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2099  ISPIET  2116
             ISPI T
Sbjct  2182  ISPINT  2187


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  6013  TRSSIGKCD  6039
             TR   GKC+
Sbjct  2187  TRARTGKCE  2195


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4686  SLKHTYG  4666
             SL  TYG
Sbjct  2271  SLNNTYG  2277


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  8403  RRAEP-AADRV  8432
             RR EP   +RV
Sbjct  2939  RRSEPQVGERV  2949


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8692  HKATS  8706
             HKATS
Sbjct  3016  HKATS  3020


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  357  LSGGEL-D---RWE  386
            LSG  L D   RWE
Sbjct  202  LSGNSLADTLFRWE  215


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4557  QEEKQR  4574
             ++EKQR
Sbjct  266   EDEKQR  271


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2570  LLVILSIP  2547
             LL  LSIP
Sbjct  515   LLASLSIP  522


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4601  PSVFH  4587
             PS+FH
Sbjct  557   PSIFH  561


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  718  SAKIT  732
            SAKIT
Sbjct  572  SAKIT  576


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  3588  SVTMFTSNPES  3556
             SVT FT   ES
Sbjct  613   SVTSFTN--ES  621


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  2368  LNFPEVLSSL  2339
             LN+ +V+S L
Sbjct  1101  LNYSDVMSKL  1110


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +3

Query  5340  SRIGVTRQRRAR  5375
             SRIG T   RAR
Sbjct  1162  SRIGKT--SRAR  1171


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1513  SIVAKK  1530
             SIV KK
Sbjct  1185  SIVTKK  1190


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3903  HLSQLA  3886
             HLSQ A
Sbjct  1364  HLSQVA  1369


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2502  FILGMVN  2482
             FIL M N
Sbjct  1479  FILDMSN  1485


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  8939  SG--VLQELL  8962
             SG  VL ELL
Sbjct  1525  SGLAVLKELL  1534


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  2380  TSRRVK-KEKI  2409
             T R  K KEKI
Sbjct  1585  TPRSTKQKEKI  1595


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2519  IRYQ  2530
             IRYQ
Sbjct  2359  IRYQ  2362


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  805   FTHAFKVLGD  776
             FT  F VL D
Sbjct  2496  FT--FRVLSD  2503


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +3

Query  999   PIAPG-----QMREP  1028
             P+ P      QMR P
Sbjct  2578  PVTPSVQQRSQMRAP  2592


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7642  IPNLFQRFI  7616
             IP L Q FI
Sbjct  157   IPYLLQLFI  165


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1801  SGHSLATT  1824
             SG SLA T
Sbjct  203   SGNSLADT  210


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1673  EFSSEQT  1693
             EFS E T
Sbjct  330   EFSAELT  336


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8949  STPDAAL  8929
             S PD AL
Sbjct  408   SSPDEAL  414


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7610  WSNKSL  7627
             WS+ SL
Sbjct  509   WSDNSL  514


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5106  IYPL  5095
             IYPL
Sbjct  1037  IYPL  1040


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4026  IYPL  4015
             IYPL
Sbjct  1037  IYPL  1040


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  2749  QKTSER-TS  2772
             QKT E  TS
Sbjct  1212  QKTNEKGTS  1220


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6864  EDCL  6853
             EDCL
Sbjct  1768  EDCL  1771


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 13/38 (34%)
 Frame = -1

Query  583   ATVLYNDLSSS---DPV*RDGCSCPSICLQPSDVSNRP  479
             AT L  DLS     +P           C  PSDV   P
Sbjct  1892  ATLLDHDLSETIYQEP----------FCSNPSDVPEKP  1919


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6784  PFCS  6773
             PFCS
Sbjct  1907  PFCS  1910


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  5351  AYSAMSTPN  5325
             A+SAM T N
Sbjct  1955  AFSAM-TQN  1962


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 12/24 (50%)
 Frame = +2

Query  4217  QGVVESMNK---------ELKKII  4261
             QGVV   NK         E KKI+
Sbjct  1973  QGVV---NKGSSNSPKMVEDKKIV  1993


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5042  INNTKK  5059
             +N+TKK
Sbjct  2767  VNDTKK  2772


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5473  HCQVC  5487
             HC VC
Sbjct  3041  HCPVC  3045


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3898  ITAGYY  3881
             +TA YY
Sbjct  7     VTADYY  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  5513  EMPKAFVMKQTW  5478
             EM    VM Q W
Sbjct  462   EMELSLVMSQRW  473


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9152  LSSGFPS  9132
             LSS FPS
Sbjct  732   LSSLFPS  738


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  67   LSSGFPS  47
            LSS FPS
Sbjct  732  LSSLFPS  738


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  421  YFFFP  407
            Y FFP
Sbjct  796  YMFFP  800


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1046  CYVTS  1032
             C+VTS
Sbjct  1458  CFVTS  1462


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4560  EEKQR  4574
             E+KQR
Sbjct  1473  EQKQR  1477


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2561  SPAIFQSS  2584
             SP IF+ S
Sbjct  1724  SPEIFEKS  1731


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4386  IMSTIL  4369
             IM T L
Sbjct  1890  IMATLL  1895


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3293  FPMFPF  3276
             FP+F F
Sbjct  2493  FPLFTF  2498


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7068  QCMPL  7082
             QC PL
Sbjct  2593  QCVPL  2597


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  332   RDGCESVS  355
             RD C  VS
Sbjct  2860  RDSCPAVS  2867


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  5091  LTEDRWNKPQ  5120
             LT DR   PQ
Sbjct  2935  LTYDRRSEPQ  2944


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5748  RKSRR  5762
             RK RR
Sbjct  183   RKARR  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3017  EILKE  3031
             EILK+
Sbjct  307   EILKQ  311


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6888  VTISGS  6871
             VT SGS
Sbjct  316   VTLSGS  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  172  IFHTD  158
            IFH D
Sbjct  559  IFHKD  563


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5848  HQHPKE  5831
             H HP E
Sbjct  694   HRHPNE  699


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3305  LSTMFP  3288
             LS +FP
Sbjct  732   LSSLFP  737


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1365  EEMMTA  1382
             EE M A
Sbjct  1137  EEIMAA  1142


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3453  EKQDML  3470
             EK+ ML
Sbjct  1144  EKEAML  1149


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8630  SPLFF  8616
             SP FF
Sbjct  1620  SPIFF  1624


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4346  SPLFF  4332
             SP FF
Sbjct  1620  SPIFF  1624


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4839  LPDPNAS  4819
             LP PN S
Sbjct  1790  LPQPNNS  1796


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7391  PVPSAS  7374
             PV SAS
Sbjct  2096  PVASAS  2101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4649  PCSNPH  4632
             PCS P+
Sbjct  2172  PCSEPQ  2177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5221  EPNPRKMSN  5195
             EP   K+SN
Sbjct  2225  EPKTQKLSN  2233


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  158   VSVENL  175
             VS++NL
Sbjct  2280  VSIQNL  2285


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6311  IIPIDNDTT  6337
             +I ID D T
Sbjct  2345  VIVIDKDKT  2353


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4800  DPNMLL  4783
             DP+ LL
Sbjct  2397  DPDILL  2402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8986  FPLGTF  9003
             FPL TF
Sbjct  2493  FPLFTF  2498


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7062  EKQCMPL  7082
             + QCM L
Sbjct  2891  QRQCMKL  2897


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  8987  FRW  8995
             FRW
Sbjct  212   FRW  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5871  NFSVAL  5854
             +FSV L
Sbjct  313   DFSVTL  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  865  SDNAEN  848
            SD+ EN
Sbjct  449  SDDEEN  454


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2699  IEELRQ  2716
             IE+L Q
Sbjct  596   IEDLSQ  601


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  2442  KYASPTSSTV  2413
             KY    SSTV
Sbjct  626   KYPGSLSSTV  635


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1277  KLDDRNLVG  1303
             KL+ R L G
Sbjct  831   KLNKRKLAG  839


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3570  SNPE  3559
             SNPE
Sbjct  865   SNPE  868


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4559  RRKAK  4573
             RRK K
Sbjct  1047  RRKSK  1051


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6814  IKRT  6825
             IKRT
Sbjct  1070  IKRT  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +2

Query  2249  PENPYNTPVFAI  2284
             PE  YN   F I
Sbjct  1641  PEHNYN---FDI  1649


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4863  SFSSIL  4846
             SF  IL
Sbjct  1817  SFTAIL  1822


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8142  KPSNIGG  8162
             KP  IGG
Sbjct  1918  KPREIGG  1924


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  804   KVVEEK  821
             K VE+K
Sbjct  1985  KMVEDK  1990


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2151  QKLNN  2165
             QKL N
Sbjct  2229  QKLSN  2233


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4537  IILYYYC  4517
             +I Y YC
Sbjct  2623  VIAYNYC  2629


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -2

Query  1272  PPVK---LARLLE  1243
             P V    L R+LE
Sbjct  2679  PSVRKGVLPRMLE  2691


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  374   RSMGKNSVKA  403
             R M K S KA
Sbjct  2697  RFMVKQSMKA  2706


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8006  IRLVN  8020
             I LVN
Sbjct  2764  IKLVN  2768


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5403  ALEASRK  5423
             ALE  RK
Sbjct  2927  ALELTRK  2933


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4285  FSLI  4274
             FSLI
Sbjct  2998  FSLI  3001


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1064  KGTSSS  1047
             K TSSS
Sbjct  3017  KATSSS  3022


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  19    RSEP  30
             RSEP
Sbjct  3023  RSEP  3026


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  9104  RSEP  9115
             RSEP
Sbjct  3023  RSEP  3026


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L Q+IR
Sbjct  3068  LNQEIR  3073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4658  SKTPY  4672
             SK PY
Sbjct  3118  SKAPY  3122


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5482  LGNESNT  5462
             LGN S T
Sbjct  91    LGNPSST  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  4625  YLPHNHHLP  4599
             Y PH  H P
Sbjct  150   YQPHEAHIP  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  338  HLSPSSL  318
            HLS  SL
Sbjct  201  HLSGNSL  207


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5364  RRARNGAS  5387
             RR RN  S
Sbjct  272   RRNRNETS  279


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  5345  SAMSTPNSEN  5316
             S MS P S++
Sbjct  279   SQMSQPESQD  288


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4939  ESEK  4928
             ESEK
Sbjct  296   ESEK  299


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  3865  RWQVKITSHC  3836
             RW   I  HC
Sbjct  472   RWDSNIEEHC  481


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5554  QNSQTH  5571
             +NS TH
Sbjct  539   ENSRTH  544


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6665  PNNNT  6679
             PN NT
Sbjct  697   PNENT  701


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6915  NSPPQLKL  6892
             N P  LKL
Sbjct  825   NKPSRLKL  832


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5354  YSTEES  5371
             Y TE+S
Sbjct  927   YETEDS  932


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  149  SEGSLVT  129
            SE S VT
Sbjct  932  SESSFVT  938


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8861  HPMQ  8850
             HPM+
Sbjct  947   HPME  950


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7842  PPTII  7828
             PP II
Sbjct  972   PPVII  976


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4374  ILSP  4363
             ILSP
Sbjct  1084  ILSP  1087


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2056  KKSVDS  2073
             KK V+S
Sbjct  1157  KKTVNS  1162


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6650  INCTRPNN  6673
             IN  RP N
Sbjct  1334  INVQRPHN  1341


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1204  RNPLE  1218
             RN LE
Sbjct  1404  RNSLE  1408


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8715  QNYTP  8729
             Q YTP
Sbjct  1413  QAYTP  1417


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3646  SQSNNRAV  3669
             SQ  NR V
Sbjct  1507  SQCKNRNV  1514


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  5554  QNSQTHQASLS  5586
             QN  T Q  LS
Sbjct  1542  QNANTTQDPLS  1552


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8092  TLDCNED  8112
             T D NE+
Sbjct  1732  TIDSNEN  1738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2068  DSDW  2079
             +SDW
Sbjct  1795  NSDW  1798


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6262  ACADIE  6245
             AC D E
Sbjct  1833  ACEDLE  1838


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5822  PISTPISTS  5796
             P S P STS
Sbjct  1852  PDSSPRSTS  1860


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  8127  PRSSTIL  8107
             PR   IL
Sbjct  1872  PRTANIL  1878


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  9059  ISSCFLP  9079
             +S C LP
Sbjct  2055  VSPCILP  2061


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8470  SQVAIQ  8487
             SQ+A Q
Sbjct  2073  SQIALQ  2078


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7369  GCAHSAS  7349
             GC + AS
Sbjct  2083  GCSQTAS  2089


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  4194  PNSCLIPAHQQ  4162
             P+S  IP  QQ
Sbjct  2120  PDSPVIPPWQQ  2130


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1618  SVQSFI  1601
             S+Q FI
Sbjct  2903  SIQDFI  2908


>ref|NP_758962.1|  L-amino-acid oxidase isoform 2 [Homo sapiens]
Length=589

 GENE ID: 259307 IL4I1 | interleukin 4 induced 1 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  2816  VQPIVL--PEKDSWTV  2857
             VQP  L   EKD WTV
Sbjct  478   VQPPALWQTEKDDWTV  493


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 7/21 (33%)
 Frame = +3

Query  2223  RKG--KFQKLGLKIHTILQYL  2279
             RK   KF+      HT L+YL
Sbjct  222   RKAMKKFER-----HTLLEYL  237


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3047  TLHVLVL  3027
             TLH LVL
Sbjct  27    TLHLLVL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  9049  DPAYKQLL  9072
             DP Y QLL
Sbjct  61    DPDYEQLL  68


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  5951  YD----TEVHNV  5974
             YD    TEVH V
Sbjct  163   YDKNTWTEVHEV  174


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +2

Query  5132  PQREPHNEWTLELL  5173
             PQR+P    TL LL
Sbjct  21    PQRQPC---TLHLL  31


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 25/48 (52%)
 Frame = +3

Query  792  NAW-----VK----VVE-------------EKAFSPEVI-PMFSALSE  866
            N W     VK    VVE             EK  SPE I  M  AL +
Sbjct  166  NTWTEVHEVKLRNYVVEKVPEKLGYALRPQEKGHSPEDIYQM--ALNQ  211


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8996  GLSRE  9010
             GLSRE
Sbjct  431   GLSRE  435


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2133  SQEWMAQ  2153
             SQ+W A+
Sbjct  43    SQDWKAE  49


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8993  WGLSR  9007
             WGL R
Sbjct  73    WGLNR  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8805  LLSYLAQLVL  8776
             LLS L  LVL
Sbjct  295   LLSSLSGLVL  304


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = -1

Query  7975  FFY-SF  7961
             FFY SF
Sbjct  260   FFYLSF  265


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3996  RITF  3985
             RITF
Sbjct  351   RITF  354


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7012  HPPMQ  7026
             HPP Q
Sbjct  570   HPPVQ  574


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6825  CSLNLL  6808
             C L LL
Sbjct  26    CTLHLL  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 10/21 (47%)
 Frame = -3

Query  5165  LVSIHCVAPSVALGLLGLVPS  5103
             LV I          LL LV S
Sbjct  33    LVPI----------LLSLVAS  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             L+PI L
Sbjct  33    LVPILL  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  7139  DGGNSNNESEIFRP  7180
             +GG SN +    RP
Sbjct  392   EGGHSNTD----RP  401


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1511  TLNNLSLVP  1485
             TL  L LVP
Sbjct  27    TLHLLVLVP  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  703  DTAIRSA-----KI  729
            +TA+ SA     KI
Sbjct  513  ETAVKSALRAAIKI  526


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3115  NLSR  3126
             NLSR
Sbjct  242   NLSR  245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9103  GLTRE  9089
             GL RE
Sbjct  431   GLSRE  435


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  18   GLTRE  4
            GL RE
Sbjct  431  GLSRE  435


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9174  SRQALLRL  9151
             SR+  LRL
Sbjct  433   SREEALRL  440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  89   SRQALLRL  66
            SR+  LRL
Sbjct  433  SREEALRL  440


>ref|NP_443171.2|  Fc receptor-like protein 3 precursor [Homo sapiens]
 sp|Q96P31.1|FCRL3_HUMAN  RecName: Full=Fc receptor-like protein 3; Short=FcR-like protein 
3; Short=FcRL3; AltName: Full=Fc receptor homolog 3; Short=FcRH3; 
AltName: Full=IFGP family protein 3; Short=hIFGP3; 
AltName: Full=Immune receptor translocation-associated protein 
3; AltName: Full=SH2 domain-containing phosphatase anchor 
protein 2; Flags: Precursor
Length=734

 GENE ID: 115352 FCRL3 | Fc receptor-like 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
 Frame = +1

Query  8653  KEDKISLICGSTTHKATSL  8709
             K +K+ LIC S  H   SL
Sbjct  36    KGEKVALICSSISH---SL  51


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7423  LLHYTR  7406
             LLHY R
Sbjct  593   LLHYAR  598


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  580  TVLYNDL  560
            TVLY +L
Sbjct  689  TVLYSEL  695


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6680  RKRIRIQRGP  6709
             R  IR+QR P
Sbjct  275   RSQIRVQRVP  284


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 12/31 (38%)
 Frame = +2

Query  8633  GRANSLPKKTRYP*SVDLPHTRLLP*LAELH  8725
             GR  SL  KT           R L  LAELH
Sbjct  326   GRVRSLGRKTQ----------RSL--LAELH  344


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  487  NRPGLTA  467
            NR GLTA
Sbjct  568  NRTGLTA  574


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9110  QIWSNQ  9093
             QIWS Q
Sbjct  664   QIWSIQ  669


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  25   QIWSNQ  8
            QIWS Q
Sbjct  664  QIWSIQ  669


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8733  ALVCSS  8716
             AL+CSS
Sbjct  41    ALICSS  46


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             W++LQA
Sbjct  101   WLILQA  106


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  365  GRIRSMG  385
            GR+RS+G
Sbjct  326  GRVRSLG  332


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 2/19 (10%)
 Frame = +2

Query  3488  KVVTL--TDTTNQKTELQA  3538
             KVVTL  T T    T L A
Sbjct  556   KVVTLNVTGTSRNRTGLTA  574


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6296  FYKLDI  6313
             FY LDI
Sbjct  169   FYILDI  174


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  8139  HP-LRPRSST  8113
             HP LR  SST
Sbjct  191   HPVLRASSST  200


 Score = 17.2 bits (33),  Expect(2) = 10478
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  3685  GLSGMGTSTQ  3714
             GLS  GTS +
Sbjct  605   GLSATGTSSH  614


 Score = 16.3 bits (31),  Expect(2) = 10478
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = +3

Query  3708  HTK-----ELEEM  3731
             H K     ELE M
Sbjct  637   HSKPLAPMELEPM  649


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4448  VYYRD  4462
             VYY D
Sbjct  132   VYYKD  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6878  EIVTHS  6895
             E VTHS
Sbjct  263   ETVTHS  268


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8090  LLLIVT  8107
             LLLI T
Sbjct  6     LLLILT  11


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5967  CTSVSYALA  5941
             C S+S  LA
Sbjct  44    CSSISHSLA  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7054  LPHVYNL  7034
             LP  YNL
Sbjct  140   LPNSYNL  146


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1219  SLKGSF  1202
             SL GSF
Sbjct  499   SLRGSF  504


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5117  GLVPSIL  5097
             GLV SIL
Sbjct  579   GLVLSIL  585


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4216  SRSSRI  4233
             SR SRI
Sbjct  625   SRPSRI  630


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = +3

Query  3426  GQLTGRLN*EKQDMLLI  3476
             GQL      E ++M LI
Sbjct  297   GQLI-----EGENMVLI  308


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7115  ITGLLL  7132
             ITGL L
Sbjct  577   ITGLVL  582


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -2

Query  6264  MLVLIL---KEQ  6238
             +L LIL    EQ
Sbjct  5     LLLLILTPGREQ  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  5311  KQQLLQNSY  5285
             KQ  L NSY
Sbjct  138   KQ--LPNSY  144


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  6681  EK---ESVSRED  6707
             EK    SVSR++
Sbjct  147   EKITVNSVSRDN  158


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8140  GSPQIL  8157
             GSP IL
Sbjct  409   GSPPIL  414


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5845  QHPKEHGA  5822
             QH KE  A
Sbjct  669   QHTKENSA  676


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  2417  LLLIFSFLT  2391
             LLLI   LT
Sbjct  6     LLLI---LT  11


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4665  VLLNFSMF  4642
             V L FS+F
Sbjct  222   VQLQFSLF  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9124  RAPRL  9110
             R PRL
Sbjct  241   RSPRL  245


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  39   RAPRL  25
            R PRL
Sbjct  241  RSPRL  245


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  6398  RIPLDRPV  6375
             RIP   PV
Sbjct  377   RIPVSHPV  384


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8272  LYYFY  8258
             LY FY
Sbjct  507   LYWFY  511


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8765  VLQASTS  8785
             VL AS S
Sbjct  193   VLRASSS  199


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1174  PAFWT  1188
             PA WT
Sbjct  248   PAMWT  252


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  2801  DGVHNPSKGMEVLS  2760
             D VH P     +LS
Sbjct  361   DNVHSP-----ILS  369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  224   LQFSL  228


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3252  LLNLNC  3269
             LL L C
Sbjct  399   LLELHC  404


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -2

Query  102  LLE----ALKASF  76
            LLE     L  SF
Sbjct  492  LLELHCESLRGSF  504


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3252  LLNLNC  3269
             LL L C
Sbjct  492   LLELHC  497


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3348  LTNSHSG  3328
             LT  HSG
Sbjct  534   LTTEHSG  540


>ref|NP_058197.2|  2'-5'-oligoadenylate synthase 2 isoform 1 [Homo sapiens]
Length=719

 GENE ID: 4939 OAS2 | 2'-5'-oligoadenylate synthetase 2, 69/71kDa [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9011  PPWKVP  8994
             PPWKVP
Sbjct  678   PPWKVP  683


 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 6/29 (20%)
 Frame = +3

Query  804  KVVEEK-AFSPEVIPMFSA---LSEGATP  878
            KV  E   F  +V P F A   LS G TP
Sbjct  472  KVLNESVSF--DVLPAFNALGQLSSGSTP  498


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  3359  LVKLWYQLEKE  3391
             LVK WY   KE
Sbjct  545   LVKHWY---KE  552


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  550  QKNLDHYIIQ  579
            QK LD + IQ
Sbjct  121  QKSLDGFTIQ  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  2055  PIMLTGVGPTNTV  2017
             P+ L  V PTN V
Sbjct  289   PVILDPVDPTNNV  301


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  8511  WLEAQEEEEVGF  8546
             W E +EE EV F
Sbjct  443   WREKEEELEVSF  454


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1674  NFLQSRP  1694
             NF  SRP
Sbjct  530   NFIRSRP  536


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  834  EVIPMFSALS  863
            EV   F ALS
Sbjct  141  EVLAAFNALS  150


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1111  EKFIKD  1128
             +KFIK+
Sbjct  349   DKFIKE  354


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2651  DLYVGSDL  2674
             DLY  SDL
Sbjct  508   DLYKSSDL  515


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1605  SFGVLP  1588
             SF VLP
Sbjct  479   SFDVLP  484


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  772  PYHLEL  789
            PY LEL
Sbjct  222  PYALEL  227


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 10/29 (34%)
 Frame = -1

Query  2359  PEVLSSLI---KFSEIY*FSP---FSTVF  2291
             PEV   LI   K S+     P   FST F
Sbjct  500   PEVYAGLIDLYKSSDL----PGGEFSTCF  524


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4929  FSDSAIRKALL  4961
             F D  IR  LL
Sbjct  271   FEDETIRNILL  281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = -3

Query  9011  PP-WKVP  8994
             PP WK P
Sbjct  456   PPKWKAP  462


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  158  LKG-SEGSLV  132
            L G S+G LV
Sbjct  69   LRGNSDGTLV  78


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2132  LILLV  2118
             LILL+
Sbjct  199   LILLI  203


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6856  LKDYCF  6839
             LK+ CF
Sbjct  377   LKENCF  382


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6610  IVREI  6596
             IV EI
Sbjct  431   IVKEI  435


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  866  RSHPTRFK  889
            RS PT  K
Sbjct  533  RSRPTKLK  540


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  4929  FSDSAIRKALL  4961
             F D  +RK LL
Sbjct  615   FEDETVRKFLL  625


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8081  LRDLLLIV  8104
             L DL L +
Sbjct  196   LKDLILLI  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3215  FALPLLIV  3192
             +AL LL V
Sbjct  223   YALELLTV  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3776  FLDGIDKA  3799
             FL+ ID A
Sbjct  362   FLEQIDSA  369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  6831  PNCSLNLLAI  6802
             P   L LL I
Sbjct  565   PKYALELLTI  574


>ref|NP_005586.1|  nuclear factor 1 A-type isoform 2 [Homo sapiens]
Length=498

 GENE ID: 4774 NFIA | nuclear factor I/A [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2084  TLNFPISPI  2110
             TL FP SPI
Sbjct  367   TLHFPTSPI  375


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query  2357  W-EVQLGIPHPAGLKK  2401
             W EV+ G P P  LKK
Sbjct  310   WHEVEPGMPSPTTLKK  325


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7848  TKPPT  7834
             TKPPT
Sbjct  456   TKPPT  460


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  142  PSDPFS  159
            P DPFS
Sbjct  491  PPDPFS  496


 Score = 18.0 bits (35),  Expect(2) =  8135
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3756  LESGKYY  3776
             LES  YY
Sbjct  249   LESSSYY  255


 Score = 16.3 bits (31),  Expect(2) =  8135
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3637  IRVSQ  3651
             +RVSQ
Sbjct  229   VRVSQ  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  2513  PGIRYQYNVLPQ  2548
             P IRY+    PQ
Sbjct  386   PAIRYH----PQ  393


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  2088  KVQPI*VNRFLPI-ML  2044
             KV+    N FLP  ML
Sbjct  426   KVH----NPFLPTPML  437


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  438   PPPPPPP  444


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5925  YFVH  5936
             YFVH
Sbjct  181   YFVH  184


 Score = 17.2 bits (33),  Expect(2) = 17633
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1127  MDNPG  1141
             MD PG
Sbjct  285   MDSPG  289


 Score = 15.5 bits (29),  Expect(2) = 17633
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1008  PGQMR  1022
             PG MR
Sbjct  259   PGAMR  263


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  909  PLCL  898
            PLCL
Sbjct  4    PLCL  7


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  7168  DLQTWRRRY  7194
             +LQ   R Y
Sbjct  32    NLQARKRKY  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5033  TSSINNTK  5056
             TSS   TK
Sbjct  269   TSSTSSTK  276


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7774  FVELV  7788
             FV+LV
Sbjct  399   FVQLV  403


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6982  PFSTPST  6962
             P  TPST
Sbjct  361   PHATPST  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4196  IPYNPQ  4213
             I Y PQ
Sbjct  388   IRYHPQ  393


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7924  DPPPNP  7941
             D PP+P
Sbjct  489   DRPPDP  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8671  RISCL  8657
             RI CL
Sbjct  116   RIDCL  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  903  CL-----AWCLNLV  877
            CL      W L+LV
Sbjct  119  CLRQADKVWRLDLV  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8874  SPGHPSHA  8851
             SP +PS A
Sbjct  193   SPSQPSDA  200


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3792  SIPSKNST  3769
             S PS  ST
Sbjct  265   SLPSTSST  272


>gb|AAR23323.1|  endogenous granzyme B precursor [Homo sapiens]
Length=281

 GENE ID: 3002 GZMB | granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated
serine esterase 1) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  8696  LCVVDPQIK  8670
             LCV DP+IK
Sbjct  221   LCVGDPEIK  229


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8721  SSANQGS  8701
             SS NQGS
Sbjct  24    SSSNQGS  30


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 10/24 (41%)
 Frame = -3

Query  2426  HPVLLLIFSFLTLRDVVFLIELPR  2355
             +P+LLL   FL L        LPR
Sbjct  36    QPILLLL-AFL-L--------LPR  49


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6818  REQFGNN  6838
             REQ GNN
Sbjct  17    REQGGNN  23


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6029  PILLL  6015
             PILLL
Sbjct  37    PILLL  41


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4637  PHPVYLPHN  4611
             PHP Y P N
Sbjct  130   PHPAYNPKN  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2801  PDKWTVQPIVL  2833
             P+K   QPI L
Sbjct  32    PEK--MQPILL  40


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  7620  LLLQLAF  7600
             LLL LAF
Sbjct  39    LLL-LAF  44


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7318  SFVPWV  7335
             SFV W+
Sbjct  269   SFVHWI  274


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7438  QQIVLLL  7418
             Q I LLL
Sbjct  36    QPILLLL  42


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4707  RHHYES  4724
             RH Y+S
Sbjct  212   RHYYDS  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4784  YYQSSI  4767
             YY S I
Sbjct  214   YYDSTI  219


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6380  ACPKVS  6397
             AC KVS
Sbjct  263   ACTKVS  268


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  7754  PIILVHSFL  7728
             PI L   FL
Sbjct  37    PILLLLAFL  45


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3080  FLLL  3069
             FLLL
Sbjct  44    FLLL  47


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  906  VGGHQA  923
            +GGH+A
Sbjct  56   IGGHEA  61


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7620  LLLQL  7606
             +LLQL
Sbjct  144   MLLQL  148


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  6470  NGTGP--CTNVS  6499
             NG  P  CT VS
Sbjct  257   NGMPPRACTKVS  268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  611  RDKRHQG  631
            R KR QG
Sbjct  14   RAKREQG  20


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7290  REKKEQ  7307
             R K EQ
Sbjct  14    RAKREQ  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1752  PQKQEPI  1772
             P+K +PI
Sbjct  32    PEKMQPI  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6227  EIKNCSF  6247
             EIK  SF
Sbjct  227   EIKKTSF  233


>ref|NP_001269.3|  inhibitor of nuclear factor kappa-B kinase subunit alpha [Homo 
sapiens]
Length=745

 GENE ID: 1147 CHUK | conserved helix-loop-helix ubiquitous kinase
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  5010  VGSLQYLA  5033
             VG LQYLA
Sbjct  182   VGTLQYLA  189


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = -1

Query  1564  FLGALQFLAVCPSLPQL  1514
             F G LQ+LA     P+L
Sbjct  181   FVGTLQYLA-----PEL  192


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +3

Query  4587  MENRW-QVMIVW  4619
             MEN W Q M  W
Sbjct  272   MEN-WLQLMLNW  282


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6526  PNSMCTL  6506
             PNS+C L
Sbjct  261   PNSLCSL  267


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8443  LETWKNMEQ  8469
             L  WK ME+
Sbjct  508   LKAWKEMEE  516


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4850  MEEKEI  4867
             MEEK I
Sbjct  514   MEEKAI  519


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  4860  FSSILWRLPDPNASL  4816
             FSS    LP PN SL
Sbjct  254   FSS---HLPQPN-SL  264


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -2

Query  5493  YETNLA-MKATL  5461
             Y  NL  MK TL
Sbjct  458   YNANLTKMKNTL  469


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  213  PFAFRSL  193
            PFA RSL
Sbjct  397  PFASRSL  403


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  3675  KRKRSIWH  3698
             KR   IWH
Sbjct  645   KRQKEIWH  652


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  7275  REEWCRE----KK  7301
             RE WC E    KK
Sbjct  55    RERWCHEIQIMKK  67


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2282  IKKKD  2296
             IKKKD
Sbjct  234   IKKKD  238


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3160  CIFSC  3146
             CIF C
Sbjct  241   CIFAC  245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 10/19 (52%)
 Frame = +3

Query  534  SLQ----------TGSEEL  560
            SLQ          TGS+EL
Sbjct  336  SLQSRIERETGINTGSQEL  354


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4810  EKETGI  4827
             E ETGI
Sbjct  342   ERETGI  347


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  858  MLKTW  844
            MLK W
Sbjct  507  MLKAW  511


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6354  VVTPQ  6368
             VVTPQ
Sbjct  697   VVTPQ  701


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = -3

Query  8993  SGKSLVASSM-SAV  8955
             S  SLV SS+  AV
Sbjct  662   SARSLVGSSLEGAV  675


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  384  PIDLIL--PR  361
            P+DL L  PR
Sbjct  290  PVDLTLKQPR  299


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5007  CYVLLD  4990
             C+VL+D
Sbjct  300   CFVLMD  305


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1619  LSTIFH  1602
             LSTI H
Sbjct  720   LSTIIH  725


 Score = 16.3 bits (31),  Expect(2) = 21654
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2892  GQVRF  2906
             G+VRF
Sbjct  250   GEVRF  254


 Score = 15.5 bits (29),  Expect(2) = 21654
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2869  EVSGEI  2886
             E SGE+
Sbjct  247   EMSGEV  252


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +2

Query  194  RDLKAKGKPE  223
            RDL    KPE
Sbjct  143  RDL----KPE  148


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  139  DPSDPFSQC  165
            DP  P SQC
Sbjct  363  DPRKPASQC  371


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2516  GIRY  2527
             GIRY
Sbjct  131   GIRY  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2268  LQYL  2279
             LQYL
Sbjct  185   LQYL  188


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3714  KELEE  3728
             KE+EE
Sbjct  512   KEMEE  516


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5245  IDMLP  5231
             ID+LP
Sbjct  619   IDLLP  623


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7269  RQREEW  7286
             RQ E W
Sbjct  646   RQKEIW  651


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8378  MAYCKG  8395
             M YC G
Sbjct  95    MEYCSG  100


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2653  IIHVLID  2633
             IIH  ID
Sbjct  159   IIHKIID  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8168  LQYWSQEL  8191
             LQY   EL
Sbjct  185   LQYLAPEL  192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  178  LEIFH  164
            LE FH
Sbjct  480  LEFFH  484


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1880  ADDTVL  1897
             AD+TV+
Sbjct  635   ADNTVM  640


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4205  CREFQI  4188
             C E QI
Sbjct  59    CHEIQI  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6887  LQFLGP  6870
             LQ+L P
Sbjct  185   LQYLAP  190


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  2244  LGLKI-HTIL  2270
             L LKI H IL
Sbjct  308   LNLKIVH-IL  316


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  735  IVQNIQGQ  758
            IV+ +Q Q
Sbjct  590  IVHTVQSQ  597


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6357  VTPQ  6368
             VTPQ
Sbjct  675   VTPQ  678


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8550  VTPQ  8561
             VTPQ
Sbjct  675   VTPQ  678


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  6230  IKNCSFNIST  6259
             IK C    ST
Sbjct  43    IKSCRLELST  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7363  RSLND  7377
             RSL D
Sbjct  401   RSLSD  405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8365  LFDHL  8351
             LF HL
Sbjct  604   LFGHL  608


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6757  CLSHIS  6740
             CL H S
Sbjct  716   CLGHLS  721


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 1/5 (20%)
 Frame = +1

Query  4768  M-LDW  4779
             M LDW
Sbjct  736   MNLDW  740


>ref|NP_001152757.1|  adenosine deaminase domain-containing protein 1 isoform 2 [Homo 
sapiens]
Length=565

 GENE ID: 132612 ADAD1 | adenosine deaminase domain containing 1
(testis-specific) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  1241  FIEPVYI  1221
             FI+PVYI
Sbjct  394   FIQPVYI  400


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5507  PKAFVMK  5487
             PK F+MK
Sbjct  83    PKEFIMK  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2725  EVGTYH  2742
             E GTYH
Sbjct  520   EAGTYH  525


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4093  KMASK  4107
             KMASK
Sbjct  48    KMASK  52


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3238  YYAFC  3224
             Y+AFC
Sbjct  127   YFAFC  131


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1092  YLSSIL  1075
             Y SSIL
Sbjct  399   YISSIL  404


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  7105  FI-KYYRAAIN  7134
             FI KY R  IN
Sbjct  86    FIMKYKRGEIN  96


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -1

Query  8959  QFLKYSGCSS  8930
             ++LKYS  SS
Sbjct  226   EYLKYS--SS  233


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  2906  KSDL---PNSIS  2880
             KS L   P SIS
Sbjct  326   KSQLRLNPHSIS  337


 Score = 16.8 bits (32),  Expect(2) = 24227
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  5212  PRKMSNSFILK  5180
             P K    FI+K
Sbjct  79    PKKIPKEFIMK  89


 Score = 15.1 bits (28),  Expect(2) = 24227
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5283  MASTPAQV  5260
             MAS   QV
Sbjct  49    MASKVTQV  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 12/24 (50%)
 Frame = +2

Query  2768  PPFLWMGYELHPDKWTVQPIVLPE  2839
             PPF        P     +P+VL E
Sbjct  179   PPF--------P----AEPVVLSE  190


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 15/30 (50%)
 Frame = -1

Query  4294  LKMF--------SLI--SY-----LSYNFL  4250
             L MF        SL+   Y     L Y FL
Sbjct  432   LPMFYLVNRPHISLVPSAYPLQMNLEYKFL  461


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8462  MFFQVSR  8442
             MF+ V R
Sbjct  434   MFYLVNR  440


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3955  MATRL  3969
             MA RL
Sbjct  494   MASRL  498


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 21/44 (47%)
 Frame = +2

Query  3836  AMASDFNLPPVVAKEI-----------VASC-------DKCQLK  3913
             AM S FNL    AKE             A C        KC LK
Sbjct  502   AMLSRFNL---LAKEAKKELLEAGTYHAAKCMSASYQEAKCKLK  542


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6739  YFSYC  6725
             YF +C
Sbjct  127   YFAFC  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8859  MDDPEREVLE  8888
             +D+PE  +LE
Sbjct  165   LDEPEPRILE  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1125  RWIILG  1142
             RW +LG
Sbjct  380   RWEVLG  385


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6401  QRIPLD  6384
             QR+ LD
Sbjct  108   QRVQLD  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  368  RIRSM  382
            RI SM
Sbjct  368  RISSM  372


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  7699  LLN*RIAKPARKE  7737
             LL    AK A KE
Sbjct  509   LL----AKEAKKE  517


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 11/20 (55%)
 Frame = +3

Query  3714  KELEEMNK*IN*SVLESGKY  3773
             KEL           LE G Y
Sbjct  516   KEL-----------LEAGTY  524


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  936  LKETIN  953
            LK+ IN
Sbjct  305  LKQNIN  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7010  LCHFLQ  6993
             L HF Q
Sbjct  391   LSHFIQ  396


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2796  SILI  2807
             SILI
Sbjct  402   SILI  405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9075  KKQLL  9061
             KK+LL
Sbjct  515   KKELL  519


>ref|NP_001034597.1|  signal-regulatory protein gamma isoform 3 precursor [Homo sapiens]
Length=276

 GENE ID: 55423 SIRPG | signal-regulatory protein gamma [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3080  FLLLSLLMG  3054
             FLLL LL+G
Sbjct  14    FLLLTLLLG  22


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  2866  TEVSGEIEL  2892
             TEV GE EL
Sbjct  24    TEVAGEEEL  32


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 19/46 (41%), Positives = 21/46 (45%), Gaps = 20/46 (43%)
 Frame = +2

Query  5825  TMLLGM--------L-MICSATEK-LWVTVYYGVPVWKEATTTLFC  5932
             T+LLG+        L MI    EK L VTV  G    K  T TL C
Sbjct  18    TLLLGLTEVAGEEELQMI--QPEKLLLVTV--G----K--TATLHC  53


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  2942  LRGTKALTEVI  2974
             LRGT  L E I
Sbjct  238   LRGTANLSEAI  248


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2144  PFLALILL  2121
             PFL L LL
Sbjct  13    PFLLLTLL  20


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8938  IRSTSR  8955
             IRST R
Sbjct  207   IRSTAR  212


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2716  TSVEVGTY  2739
             T  +VGTY
Sbjct  110   TPADVGTY  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6279  RKNMHFFI  6302
             R NM F I
Sbjct  97    RNNMDFSI  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8329  DFAIR  8343
             DF IR
Sbjct  101   DFSIR  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  579  VATLYCV  599
            V T YCV
Sbjct  114  VGTYYCV  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7109  SNITGLLL  7132
             S  T LLL
Sbjct  253   SSLTALLL  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7365  APIVL  7351
             AP+VL
Sbjct  148   APVVL  152


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4052  TGQETAY  4072
             TGQ  AY
Sbjct  199   TGQSVAY  205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3824  CDISHV  3807
             C++ HV
Sbjct  226   CEVAHV  231


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4310  PFVLL  4296
             PF LL
Sbjct  13    PFLLL  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1796  FPQVT  1810
             FP VT
Sbjct  85    FPRVT  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  468  RIVLAP  451
            R+VL P
Sbjct  212  RVVLDP  217


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6248  NISTSIRG  6271
             N S  IRG
Sbjct  243   NLSEAIRG  250


>ref|NP_075573.2|  calpain-10 isoform c [Homo sapiens]
Length=517

 GENE ID: 11132 CAPN10 | calpain 10 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 9/19 (47%)
 Frame = +3

Query  8526  EEEE---------VGFPVT  8555
             EEEE         VG+PVT
Sbjct  304   EEEEFLREFDELTVGYPVT  322


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5282  WLPLLPK  5262
             WLPLL K
Sbjct  147   WLPLLEK  153


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  8392  LTVGHPIT  8369
             LTVG P+T
Sbjct  315   LTVGYPVT  322


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5789  YQHLW  5803
             Y+HLW
Sbjct  162   YEHLW  166


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 19/44 (43%)
 Frame = +2

Query  8045  DLRSL------CLFSYHRLRDLLLIVTRIVELLGRRGWEALKYW  8158
             DLR L      C         LLL   RI    GRR W+ L  W
Sbjct  244   DLRELQGQAGQCI--------LLL---RIQNPWGRRCWQGL--W  274


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  7809  HSQFVMLNQF  7780
             HSQ  ML QF
Sbjct  497   HSQ-EMLGQF  505


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1810  SDLREVKG  1787
             SDLRE  G
Sbjct  243   SDLRELQG  250


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2725  QQMLSQLL  2702
             Q+ML Q L
Sbjct  499   QEMLGQFL  506


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7177  TWRR  7188
             TWRR
Sbjct  42    TWRR  45


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9146  SGFPS  9132
             SGFPS
Sbjct  359   SGFPS  363


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  61   SGFPS  47
            SGFPS
Sbjct  359  SGFPS  363


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7571  FQSNPK  7554
             F SNPK
Sbjct  361   FPSNPK  366


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  8887  SNTSLSGSSIP  8855
             S TS S  SIP
Sbjct  403   SHTSWSPASIP  413


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5905  PHRY  5894
             PHRY
Sbjct  450   PHRY  453


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3521  SDLLCQL  3501
             S+LL QL
Sbjct  290   SELLSQL  296


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3240  YGERLL  3257
             Y ERLL
Sbjct  331   YTERLL  336


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  284  AAPRLLP  264
            A PRL P
Sbjct  51   ATPRLFP  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6521  FHVYIV  6504
             FH +IV
Sbjct  237   FHAFIV  242


 Score = 16.8 bits (32),  Expect(2) = 25117
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1847  GQLKEALL  1870
             GQ K+ LL
Sbjct  63    GQVKQGLL  70


 Score = 15.1 bits (28),  Expect(2) = 25117
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1809  LFGNDP  1826
             LF +DP
Sbjct  55    LFPDDP  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6396  PLSQF  6410
             PL QF
Sbjct  33    PLAQF  37


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  504  CRQIL  518
            CRQ L
Sbjct  208  CRQLL  212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  111  RLLC  122
            RLLC
Sbjct  334  RLLC  337


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8452  RSRDAAP  8432
             RS DA P
Sbjct  432   RSQDAPP  438


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4539  LLSCI  4525
             LLSC+
Sbjct  445   LLSCV  449


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2200  RNLYRD  2217
             R L+RD
Sbjct  11    RELFRD  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4245  SLFIDSTTP  4219
             SLF D  TP
Sbjct  25    SLFCDLSTP  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7335  SWEQQE  7352
             SW  QE
Sbjct  99    SWADQE  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1866  RASFSC  1849
             R SF C
Sbjct  106   RGSFTC  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6803  IASKLRE  6823
             I S LRE
Sbjct  241   IVSDLRE  247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2891  WASQIYPG  2914
             WA Q Y G
Sbjct  100   WADQEYRG  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  7533  RINSSWG  7553
             RI   WG
Sbjct  260   RIQNPWG  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -2

Query  4788  LLLPI*HPLVGCV  4750
             LLL    PL  CV
Sbjct  439   LLLQE--PLLSCV  449


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5460  FTIAIGT  5440
             FT+ I T
Sbjct  483   FTVTIAT  489


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  7525  SFHSQDSCLELL  7490
             S HSQ    E+L
Sbjct  495   SIHSQ----EML  502


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8871  PGHPS  8857
             PG+PS
Sbjct  95    PGQPS  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8192  LVPDSNT  8172
             LV DS T
Sbjct  399   LVGDSHT  405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7134  QEMVVIATM  7160
             QE  V A M
Sbjct  507   QEVSVMAVM  515


>ref|NP_690863.1|  L-amino-acid oxidase isoform 1 precursor [Homo sapiens]
 sp|Q96RQ9.1|OXLA_HUMAN  RecName: Full=L-amino-acid oxidase; Short=LAAO; Short=LAO; AltName: 
Full=Interleukin-4-induced protein 1; Short=IL4-induced 
protein 1; AltName: Full=Protein Fig-1; Short=hFIG1; Flags: 
Precursor
Length=567

 GENE ID: 259307 IL4I1 | interleukin 4 induced 1 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  2816  VQPIVL--PEKDSWTV  2857
             VQP  L   EKD WTV
Sbjct  456   VQPPALWQTEKDDWTV  471


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 7/21 (33%)
 Frame = +3

Query  2223  RKG--KFQKLGLKIHTILQYL  2279
             RK   KF+      HT L+YL
Sbjct  200   RKAMKKFER-----HTLLEYL  215


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  9049  DPAYKQLL  9072
             DP Y QLL
Sbjct  39    DPDYEQLL  46


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  5951  YD----TEVHNV  5974
             YD    TEVH V
Sbjct  141   YDKNTWTEVHEV  152


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 25/48 (52%)
 Frame = +3

Query  792  NAW-----VK----VVE-------------EKAFSPEVI-PMFSALSE  866
            N W     VK    VVE             EK  SPE I  M  AL +
Sbjct  144  NTWTEVHEVKLRNYVVEKVPEKLGYALRPQEKGHSPEDIYQM--ALNQ  189


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3044  LHVLVL  3027
             LH LVL
Sbjct  6     LHLLVL  11


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8996  GLSRE  9010
             GLSRE
Sbjct  409   GLSRE  413


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 16/31 (51%)
 Frame = -3

Query  5180  APLKAL-----VSIHCVAPSVALGLLGLVPS  5103
             APL AL     V I          LL LV S
Sbjct  2     APL-ALHLLVLVPI----------LLSLVAS  21


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2133  SQEWMAQ  2153
             SQ+W A+
Sbjct  21    SQDWKAE  27


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8993  WGLSR  9007
             WGL R
Sbjct  51    WGLNR  55


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8805  LLSYLAQLVL  8776
             LLS L  LVL
Sbjct  273   LLSSLSGLVL  282


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = -1

Query  7975  FFY-SF  7961
             FFY SF
Sbjct  238   FFYLSF  243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2138  LALILLV  2118
             LAL LLV
Sbjct  4     LALHLLV  10


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3996  RITF  3985
             RITF
Sbjct  329   RITF  332


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7012  HPPMQ  7026
             HPP Q
Sbjct  548   HPPVQ  552


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             L+PI L
Sbjct  11    LVPILL  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  7139  DGGNSNNESEIFRP  7180
             +GG SN +    RP
Sbjct  370   EGGHSNTD----RP  379


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8357  PLATHL  8340
             PLA HL
Sbjct  3     PLALHL  8


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  703  DTAIRSA-----KI  729
            +TA+ SA     KI
Sbjct  491  ETAVKSALRAAIKI  504


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3115  NLSR  3126
             NLSR
Sbjct  220   NLSR  223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9103  GLTRE  9089
             GL RE
Sbjct  409   GLSRE  413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  18   GLTRE  4
            GL RE
Sbjct  409  GLSRE  413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9174  SRQALLRL  9151
             SR+  LRL
Sbjct  411   SREEALRL  418


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  89   SRQALLRL  66
            SR+  LRL
Sbjct  411  SREEALRL  418


>ref|NP_002526.2|  2'-5'-oligoadenylate synthase 2 isoform 2 [Homo sapiens]
Length=687

 GENE ID: 4939 OAS2 | 2'-5'-oligoadenylate synthetase 2, 69/71kDa [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9011  PPWKVP  8994
             PPWKVP
Sbjct  678   PPWKVP  683


 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 6/29 (20%)
 Frame = +3

Query  804  KVVEEK-AFSPEVIPMFSA---LSEGATP  878
            KV  E   F  +V P F A   LS G TP
Sbjct  472  KVLNESVSF--DVLPAFNALGQLSSGSTP  498


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  3359  LVKLWYQLEKE  3391
             LVK WY   KE
Sbjct  545   LVKHWY---KE  552


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  550  QKNLDHYIIQ  579
            QK LD + IQ
Sbjct  121  QKSLDGFTIQ  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  2055  PIMLTGVGPTNTV  2017
             P+ L  V PTN V
Sbjct  289   PVILDPVDPTNNV  301


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  8511  WLEAQEEEEVGF  8546
             W E +EE EV F
Sbjct  443   WREKEEELEVSF  454


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1674  NFLQSRP  1694
             NF  SRP
Sbjct  530   NFIRSRP  536


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  834  EVIPMFSALS  863
            EV   F ALS
Sbjct  141  EVLAAFNALS  150


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1111  EKFIKD  1128
             +KFIK+
Sbjct  349   DKFIKE  354


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2651  DLYVGSDL  2674
             DLY  SDL
Sbjct  508   DLYKSSDL  515


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1605  SFGVLP  1588
             SF VLP
Sbjct  479   SFDVLP  484


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  772  PYHLEL  789
            PY LEL
Sbjct  222  PYALEL  227


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 10/29 (34%)
 Frame = -1

Query  2359  PEVLSSLI---KFSEIY*FSP---FSTVF  2291
             PEV   LI   K S+     P   FST F
Sbjct  500   PEVYAGLIDLYKSSDL----PGGEFSTCF  524


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4929  FSDSAIRKALL  4961
             F D  IR  LL
Sbjct  271   FEDETIRNILL  281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = -3

Query  9011  PP-WKVP  8994
             PP WK P
Sbjct  456   PPKWKAP  462


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  4469  NPL--WKGPAK  4495
             NP   WK P K
Sbjct  675   NPIPPWKVPVK  685


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  158  LKG-SEGSLV  132
            L G S+G LV
Sbjct  69   LRGNSDGTLV  78


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2132  LILLV  2118
             LILL+
Sbjct  199   LILLI  203


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6856  LKDYCF  6839
             LK+ CF
Sbjct  377   LKENCF  382


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6610  IVREI  6596
             IV EI
Sbjct  431   IVKEI  435


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  866  RSHPTRFK  889
            RS PT  K
Sbjct  533  RSRPTKLK  540


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  4929  FSDSAIRKALL  4961
             F D  +RK LL
Sbjct  615   FEDETVRKFLL  625


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8081  LRDLLLIV  8104
             L DL L +
Sbjct  196   LKDLILLI  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3215  FALPLLIV  3192
             +AL LL V
Sbjct  223   YALELLTV  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3776  FLDGIDKA  3799
             FL+ ID A
Sbjct  362   FLEQIDSA  369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  6831  PNCSLNLLAI  6802
             P   L LL I
Sbjct  565   PKYALELLTI  574


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2117  VPVK  2128
             VPVK
Sbjct  682   VPVK  685


>ref|NP_037503.2|  interleukin-19 isoform 2 precursor [Homo sapiens]
Length=177

 GENE ID: 29949 IL19 | interleukin 19 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -1

Query  5221  EPNP---RKMS---NSF  5189
             EPNP   RK S   NSF
Sbjct  95    EPNPKILRKISSIANSF  111


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3249  FPHITMLS  3226
             FP +T LS
Sbjct  54    FPNVTILS  61


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3686  VYLAWV  3703
             V+LAW+
Sbjct  162   VFLAWI  167


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8037  ISAKDPFTN  8011
             I AKD F N
Sbjct  48    IQAKDTFPN  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  7511  LA--VERYLKDQQ  7543
             LA  V+R  KD+Q
Sbjct  82    LAFYVDRVFKDHQ  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5196  LDIFL  5210
             LD+FL
Sbjct  160   LDVFL  164


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  2784  WVMNSILI  2807
             W +  ILI
Sbjct  9     WLLGTILI  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3462  DMLLIEE  3482
             DM  IEE
Sbjct  33    DMHHIEE  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKR I
Sbjct  43    EIKRAI  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5856  LQII  5845
             LQII
Sbjct  66    LQII  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4804  IQEKET  4821
             IQ K+T
Sbjct  48    IQAKDT  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7092  DKLDVH  7109
             D L+VH
Sbjct  145   DQLEVH  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  602  MHTIE  588
            MH IE
Sbjct  34   MHHIE  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6061  FPHVKI  6044
             FP V I
Sbjct  54    FPNVTI  59


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  125   RQCHC  129


>ref|NP_987099.1|  C-type lectin domain family 4 member C isoform 2 [Homo sapiens]
Length=182

 GENE ID: 170482 CLEC4C | C-type lectin domain family 4, member C [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 12/26 (46%)
 Frame = -1

Query  4045  WNNF---CFYISTGYM--------NC  4001
             W  F   C++ISTG M        NC
Sbjct  56    WTSFQSSCYFISTG-MQSWTKSQKNC  80


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5238  CCPKPW  5221
             CCP PW
Sbjct  51    CCPTPW  56


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5757  RRQWQ  5771
             RR+WQ
Sbjct  119   RRHWQ  123


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  5117  PEDQGPQREPHN  5152
             PE++   R PHN
Sbjct  3     PEEEPQDRVPHN  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7687  CVIVNF  7670
             C I+NF
Sbjct  149   CAIINF  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4850  MEEKEI  4867
             ME K+I
Sbjct  41    MEGKDI  46


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2855  QSSCLF  2838
             QSSC F
Sbjct  60    QSSCYF  65


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             W K QK
Sbjct  73    WTKSQK  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1961  KVRQYDQ  1981
             K R+Y Q
Sbjct  26    KLREYQQ  32


 Score = 15.5 bits (29),  Expect(2) = 67180
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4319  IHNFKR  4336
             I+N KR
Sbjct  100   IQNLKR  105


 Score = 15.1 bits (28),  Expect(2) = 67180
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4192  WNSLQS  4209
             W S QS
Sbjct  56    WTSFQS  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5880  VTHNF  5866
             V HNF
Sbjct  11    VPHNF  15


>pdb|1ZGL|M  Chain M, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
 pdb|1ZGL|Q  Chain Q, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
 pdb|1ZGL|S  Chain S, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
 pdb|1ZGL|U  Chain U, Crystal Structure Of 3a6 Tcr Bound To MbpHLA-Dr2a
Length=209


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -3

Query  4844  GDSLTQM--PVSFS  4809
             GDS TQM  PV  S
Sbjct  1     GDSVTQMEGPVTLS  14


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  116   QNPDPAVYQ  124


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  178   WSNKS  182


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8    LVRPD  22
            LVRPD
Sbjct  110  LVRPD  114


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9093  LVRPD  9107
             LVRPD
Sbjct  110   LVRPD  114


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2927  QLCKLLRGTKA  2959
             QL  LL  TKA
Sbjct  45    QL--LLKATKA  53


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4591  SIIPND  4574
             SIIP D
Sbjct  193   SIIPED  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4883  VYLCAIS  4863
             VY CA S
Sbjct  87    VYFCALS  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6338  SYKL  6349
             SYKL
Sbjct  98    SYKL  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  134   SVCLF  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3971  THLEGKVIL  3997
             T++EG V L
Sbjct  5     TQMEGPVTL  13


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1440  QVTNSA  1457
             QV +SA
Sbjct  81    QVSDSA  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  124   QLRDSKSSD  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  179   SNKSDFAC  186


>pir||JC8058  laeverin - human
Length=990


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 13/34 (38%), Positives = 14/34 (41%), Gaps = 15/34 (44%)
 Frame = +3

Query  4818  DWHLGQGVSIEWRKKRYSTQVDPELADQLIHLYY  4919
             +W   Q VS     KRY TQ        LI L Y
Sbjct  912   NW---QAVS-----KRYGTQ-------SLINLIY  930


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5979  PHMPVY  5996
             PHMP Y
Sbjct  301   PHMPTY  306


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2850  QLSFSG  2833
             QLSFSG
Sbjct  205   QLSFSG  210


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1128  WIILGLN  1148
             W+IL LN
Sbjct  647   WVILNLN  653


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  3415  EGFCSYYGF  3389
             EGF SY+ F
Sbjct  438   EGFASYFEF  446


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3377  QLEKEP  3394
             QLEK+P
Sbjct  673   QLEKDP  678


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  7007  TITLPCRIKQIINMW  7051
             T+ LP  IK I + W
Sbjct  556   TVILPATIKNIMDSW  570


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 0/17 (0%)
 Frame = -3

Query  5147  VAPSVALGLLGLVPSIL  5097
             V   VAL L GLV   L
Sbjct  11    VSHAVALLLAGLVAALL  27


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6036  TFTNTT  6019
             T+TNTT
Sbjct  845   TYTNTT  850


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  7524  LSTARILAW  7498
             LS ARI AW
Sbjct  978   LS-ARIAAW  985


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3703  TSTQRNWR  3726
             T T  NWR
Sbjct  81    TTTPSNWR  88


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1189  MSRML  1175
             M RML
Sbjct  509   MARML  513


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  127  LVTRD  141
            LVTRD
Sbjct  730  LVTRD  734


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = +2

Query  3539  IY--------LALQD  3559
             IY        LALQD
Sbjct  762   IYSTIIRENVLALQD  776


 Score = 17.6 bits (34),  Expect(2) =  9368
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5700  ENIKTKK  5720
             EN K KK
Sbjct  971   ENLKNKK  977


 Score = 15.9 bits (30),  Expect(2) =  9368
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5567  LIKLLY  5584
             LI L Y
Sbjct  925   LINLIY  930


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6621  MVLALS  6604
             MVL LS
Sbjct  188   MVLELS  193


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5240  YVALS  5226
             YVALS
Sbjct  270   YVALS  274


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1822  SLPKSD  1805
             SLPK D
Sbjct  364   SLPKTD  369


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9178  ALKASF  9161
             ALKA F
Sbjct  255   ALKATF  260


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  93   ALKASF  76
            ALKA F
Sbjct  255  ALKATF  260


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4581  LMIF  4570
             LMIF
Sbjct  386   LMIF  389


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  2825  IVLPE-----KDSWT  2854
             ++LP       DSWT
Sbjct  557   VILPATIKNIMDSWT  571


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1576  QQPFFL  1559
             Q+PF+L
Sbjct  590   QEPFYL  595


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/20 (35%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
 Frame = +2

Query  2018  TVLVGPTPVNIIGRNLLTQI  2077
             TVLV     N + R+L  ++
Sbjct  725   TVLV-----NLVTRDLVSEV  739


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3530  LQAIYLAL  3553
             LQ  YLAL
Sbjct  774   LQDDYLAL  781


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3030  NQYME  3044
             N YME
Sbjct  872   NRYME  876


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1581  ISNSPF  1564
             IS SPF
Sbjct  879   ISTSPF  884


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4385  IATDIQTKELQ  4417
             + TD Q  ELQ
Sbjct  936   VTTDLQIVELQ  946


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8039  WDDLR  8053
             WD LR
Sbjct  93    WDQLR  97


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 13/30 (43%)
 Frame = -3

Query  287  VAAPRLLPCALQ---QAESCVERA----PL  219
            VA  RLL   L+   Q   C ERA    PL
Sbjct  139  VATSRLL---LHSLFQD--C-ERAEVRGPL  162


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1412  LMAGSSYSL  1386
             L  GSSY L
Sbjct  196   LKPGSSYEL  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7625  EIYYSN  7608
             EI++SN
Sbjct  460   EIFFSN  465


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -1

Query  4480  PKWISAVPVI  4451
             PK   A+PVI
Sbjct  678   PK---AIPVI  684


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7446  IALSKLF  7426
             I L KLF
Sbjct  782   ISLEKLF  788


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = +2

Query  3503  TDTTN--QKTEL  3532
             T+TTN  +K +L
Sbjct  847   TNTTNKEEKIQL  858


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  5451  AIGTSSFRLTS  5419
             AI TS F  TS
Sbjct  878   AISTSPF--TS  886


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5215  LAPWL  5229
             L PWL
Sbjct  98    LPPWL  102


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1417  LALWP  1403
             L LWP
Sbjct  109   LELWP  113


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9030  GEWRAL  9047
             GE RAL
Sbjct  229   GERRAL  234


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = -2

Query  2250  GPIFEIFPSF  2221
             GPIF    SF
Sbjct  349   GPIF----SF  354


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  4013  ASGYIEAEVI  4042
             AS Y E EVI
Sbjct  441   AS-YFEFEVI  449


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  6967  ST-IKPSTIK  6941
             ST I P TIK
Sbjct  555   STVILPATIK  564


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3796  LIYSI  3782
             LIY I
Sbjct  928   LIYTI  932


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -2

Query  2145  SIPGFNFTGTVSI  2107
             S P   FTG V I
Sbjct  124   SLP---FTGRVNI  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3150  PVFRFL  3133
             P+F FL
Sbjct  350   PIFSFL  355


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  6953  WFNSTWSTEG  6982
             W N  W  EG
Sbjct  430   WWNNIWLNEG  439


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  510  VYSLL  496
            +YSLL
Sbjct  744  IYSLL  748


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5864  EKLWVT  5881
             EKL VT
Sbjct  785   EKLFVT  790


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  4813  KETGIWVR  4836
             KE  IW R
Sbjct  325   KEIRIWAR  332


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4279  LISY  4268
             LISY
Sbjct  408   LISY  411


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5765  VAMRV  5779
             VAM V
Sbjct  482   VAMKV  486


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2177  EEKI  2188
             EEKI
Sbjct  853   EEKI  856


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4071  YAVSC  4057
             YA SC
Sbjct  860   YAMSC  864


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8302  RYVA  8291
             RYVA
Sbjct  902   RYVA  905


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2017  YSISRT  2034
             Y I RT
Sbjct  930   YTIGRT  935


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1824  GRCQRV  1807
             G C+RV
Sbjct  38    GHCERV  43


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  381  WEKIRLRP  404
            W+  RL P
Sbjct  93   WDQLRLPP  100


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/19 (31%), Positives = 8/19 (42%), Gaps = 8/19 (42%)
 Frame = -2

Query  5430  RLTSWMLPGL*SRIYWLHF  5374
             RL  W+ P        LH+
Sbjct  97    RLPPWLVP--------LHY  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -2

Query  990  ALDALYPILQL  958
            ALD  Y +L+L
Sbjct  182  ALDTEYMVLEL  192


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = -1

Query  7006  VTSFSVI*PFSTP  6968
             VT FS      TP
Sbjct  294   VTTFS-----TTP  301


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8289  FATYLE  8306
             FA Y E
Sbjct  440   FASYFE  445


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2773  WRFFLM  2756
             WR F M
Sbjct  544   WRHFQM  549


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6910  PSTIK  6896
             P TIK
Sbjct  560   PATIK  564


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4527  ITTAPS  4510
             +TT PS
Sbjct  80    VTTTPS  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  127  LVTR  138
            LVTR
Sbjct  477  LVTR  480


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  137  LVTR  126
            LVTR
Sbjct  477  LVTR  480


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6330  ILPA  6341
             ILPA
Sbjct  558   ILPA  561


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2230  ENFKN  2244
             EN KN
Sbjct  596   ENIKN  600


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3027  KNQYME  3044
             KN Y E
Sbjct  698   KNNYIE  703


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6599  FTDNAKTII  6625
             FT N   II
Sbjct  884   FTSNETNII  892


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8348  WQVVKK  8365
             WQ V K
Sbjct  913   WQAVSK  918


>ref|NP_001166935.1|  kinesin-like protein KIF21A isoform 1 [Homo sapiens]
Length=1674

 GENE ID: 55605 KIF21A | kinesin family member 21A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -3

Query  7937  LGGGSETIMV  7908
             LGG S+TIM+
Sbjct  336   LGGNSQTIMI  345


 Score = 21.0 bits (42),  Expect(2) =   558
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  7139  DGGNSNNESE  7168
             DGG S +ES+
Sbjct  625   DGGESSDESD  634


 Score = 18.0 bits (35),  Expect(2) =   558
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = +1

Query  7171  LQTWRRRYEGQLEK  7212
             LQT    YE   EK
Sbjct  671   LQTLKKQYE---EK  681


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 12/28 (42%)
 Frame = +2

Query  4229  ESMNKELKKIIGQVRDQA---EH---LK  4294
             + MNKEL         QA   EH   LK
Sbjct  726   QAMNKELQRL------QAAQKEHARLLK  747


 Score = 18.9 bits (37),  Expect(2) =  1077
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2699  IEELRQHLL  2725
             IE+LR  LL
Sbjct  486   IEDLRAKLL  494


 Score = 18.9 bits (37),  Expect(2) =  1077
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2754  NIRKNL  2771
             N RKNL
Sbjct  502   NLRKNL  507


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8867  PGERSVRVEV  8896
             P E SVRV V
Sbjct  5     PDESSVRVAV  14


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6060  FHMLK  6046
             FHMLK
Sbjct  1084  FHMLK  1088


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  428  KTYSMG  445
            KTY MG
Sbjct  94   KTYTMG  99


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3743  YLLVHFL  3723
             YLL HFL
Sbjct  1039  YLLDHFL  1045


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7679  NYTSLI  7696
             NYTSL+
Sbjct  1397  NYTSLV  1402


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8145  PSNIGGIS  8168
             PS IG IS
Sbjct  1218  PSKIGSIS  1225


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1985  VSDHTVLL  1962
             V DH VLL
Sbjct  1593  VPDHPVLL  1600


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2551  MERITSNI  2574
             ME  T NI
Sbjct  989   MESLTANI  996


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4812  LLYAD  4798
             LLYAD
Sbjct  1163  LLYAD  1167


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/27 (33%), Positives = 9/27 (33%), Gaps = 16/27 (59%)
 Frame = +1

Query  8935  CIR----------------STSRTADI  8967
             CIR                STSRT  I
Sbjct  1421  CIRTLTSSGQVTLGDACSASTSRTVAI  1447


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 16/43 (37%)
 Frame = +2

Query  6569  EEEVVIRSVN--FTDNAKTIIVQLNTSVEINCTRPNNNTRKRI  6691
             +EE V  S+N  F +NA      L T  E      NNN R RI
Sbjct  411   DEEGVE-SINDMFHENAM-----LQT--E------NNNLRVRI  439


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1263  KLARLLE  1243
             KL RLL+
Sbjct  327   KLTRLLQ  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1449  NSATIM  1466
             NS TIM
Sbjct  339   NSQTIM  344


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8601  LSHFLKEKGGL  8633
             L H LKEK  L
Sbjct  1083  LFHMLKEKAEL  1093


 Score = 17.2 bits (33),  Expect(2) = 10887
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3635  ESELVNQIIEQLIK  3676
             ESE VN   E L K
Sbjct  495   ESEAVN---ENLRK  505


 Score = 15.5 bits (29),  Expect(2) = 10887
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +2

Query  3653  QII-------EQLIKKEK  3685
             +II       E L  KEK
Sbjct  536   EIIDLAKKDLEKLKRKEK  553


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2261  YNTPVFA  2281
             YN  VFA
Sbjct  80    YNATVFA  86


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -1

Query  8431  TLSA-------AGSARL  8402
             TL A       AGS RL
Sbjct  265   TLTAKFHFVDLAGSERL  281


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4426  YKNSKFSGLLQ  4458
             Y +SK   LLQ
Sbjct  323   YRDSKLTRLLQ  333


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1514  ETLNNL  1497
             ETLN L
Sbjct  357   ETLNTL  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5952  MIQRYI  5969
             MI+ YI
Sbjct  478   MIHSYI  483


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2282  WQILE  2268
             WQ LE
Sbjct  923   WQLLE  927


 Score = 16.3 bits (31),  Expect(2) = 18099
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7051  AESRKSNV  7074
             A S KSN+
Sbjct  168   AKSKKSNI  175


 Score = 15.1 bits (28),  Expect(2) = 18099
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7154  NNESE  7168
             N ESE
Sbjct  196   NTESE  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2004  CPQI  1993
             CPQI
Sbjct  240   CPQI  243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -1

Query  9136  LVSQ-RAPR----LRSGLTR  9092
             +V Q RA      LRS  TR
Sbjct  376   MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -2

Query  51   LVSQ-RAPR----LRSGLTR  7
            +V Q RA      LRS  TR
Sbjct  376  MVNQDRASQQINALRSEITR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8796  KIEEANKGE  8822
             K EE N  E
Sbjct  561   KLEESNREE  569


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE +E +EV
Sbjct  599   LEVEESQEV  607


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  5193  LLDIFLGFGSM  5225
             LLD FL   SM
Sbjct  1040  LLDHFL---SM  1047


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  930   QMLKE  944
             +MLKE
Sbjct  1085  HMLKE  1089


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SPP SP
Sbjct  1271  SPPSSP  1276


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PS PPS
Sbjct  1273  PSSPPS  1278


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2865  MSLTV-QLSFSG  2833
             M LTV Q S SG
Sbjct  1496  MCLTVDQIS-SG  1506


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4268  VRDQAEH  4288
             V DQA H
Sbjct  457   VSDQANH  463


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3772  YFPDSST  3752
             YF  SST
Sbjct  516   YFSGSST  522


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  5581  EKLDESD  5561
             +KL+ES+
Sbjct  560   QKLEESN  566


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  562  LSSSD  548
            LSSSD
Sbjct  852  LSSSD  856


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7606  SIPRHSS  7586
             SI R+SS
Sbjct  1223  SISRQSS  1229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4984  HLGLTMC  4964
             HLG  MC
Sbjct  1491  HLGPVMC  1497


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  593  IEGC  582
            IEGC
Sbjct  25   IEGC  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5525  RSGDSDEE  5548
             R G+ +EE
Sbjct  467   RAGEGNEE  474


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4278  RLNILRQQY  4304
             RL  L  QY
Sbjct  670   RLQTLKKQY  678


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5091  LTEDRWN  5111
             LTE R N
Sbjct  786   LTESRRN  792


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8618  RKGGTGR  8638
             RKG TGR
Sbjct  906   RKGLTGR  912


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2662  YIQIIHVLID  2633
             YIQ I  LI+
Sbjct  65    YIQCIEKLIE  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6472  IERLI  6458
             IE LI
Sbjct  69    IEKLI  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7293  EKKEQ  7307
             EKKE+
Sbjct  584   EKKEE  588


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3626  DQSESE  3643
             D+S+SE
Sbjct  631   DESDSE  636


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8518  KHKRRRR  8538
             K K RRR
Sbjct  1150  KNKARRR  1156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +1

Query  8665  ISLICGSTTH  8694
             I  IC   TH
Sbjct  1629  INAICVNSTH  1638


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5323  ELGVDIA  5343
             +LG DIA
Sbjct  1666  DLGEDIA  1672


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5967  CTSV  5956
             CTSV
Sbjct  31    CTSV  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7174  EDLGLI  7157
             E+LG I
Sbjct  109   EELGII  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5302  LLQNS  5288
             LLQ+S
Sbjct  331   LLQDS  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = +2

Query  7418  QQQNNLLRA-IEAQQ  7459
             Q +NN LR  I A Q
Sbjct  429   QTENNNLRVRIKAMQ  443


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9055  QDLRA  9041
             +DLRA
Sbjct  487   EDLRA  491


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  190  RAPLLE  173
            RA LLE
Sbjct  490  RAKLLE  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2157  TFGPSI  2140
             TF P I
Sbjct  522   TFSPTI  527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2284  KEKR  2295
             KEKR
Sbjct  551   KEKR  554


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5940  MLKHMI  5957
             ML H I
Sbjct  684   MLQHKI  689


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4406  KELQ  4417
             KELQ
Sbjct  730   KELQ  733


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6572  EEVVIR  6589
             +EVV R
Sbjct  819   QEVVLR  824


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4329  LKEKGGL  4349
             LKEK  L
Sbjct  1087  LKEKAEL  1093


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  955   RKLQNG  972
             R LQ+G
Sbjct  1654  RNLQDG  1659


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8834  VTPCEP  8851
             VTP EP
Sbjct  34    VTPGEP  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  194  RDLKAKGK  217
            RD  AK K
Sbjct  164  RDIDAKSK  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7822  IHNDS  7836
             IH DS
Sbjct  177   IHEDS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  6700  ERTRESI  6720
             ER  E I
Sbjct  289   ERAKEGI  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  537  LQTGSEELR  563
            LQT    LR
Sbjct  428  LQTENNNLR  436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3115  NLSRA  3129
             NL RA
Sbjct  506   NLTRA  510


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4241  KELKK  4255
             K+LKK
Sbjct  754   KQLKK  758


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9035  LPSPA  9021
             LP PA
Sbjct  892   LPTPA  896


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3103  MDISNL  3120
             M ISN+
Sbjct  938   MTISNM  943


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6381  ACVMTE  6364
             AC +TE
Sbjct  1031  ACTLTE  1036


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7645  HDLDGV  7662
             +DLD V
Sbjct  1106  QDLDSV  1111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = +2

Query  6665  PNNNTRKR  6688
             P N  R R
Sbjct  1149  PKNKARRR  1156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7268  KAKRR  7282
             KA RR
Sbjct  1152  KARRR  1156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5116  PRRPR  5130
             P RPR
Sbjct  1277  PSRPR  1281


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  194   CSGATAR  174
             CS  T R
Sbjct  1437  CSASTSR  1443


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8265  TSITLSVPS  8239
             TS T  +PS
Sbjct  1441  TSRTVAIPS  1449


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2320  RFQRT  2334
             RFQ T
Sbjct  1481  RFQST  1485


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  4708  DITMKALIQE  4737
             D T K L Q+
Sbjct  1569  DLTQKDLLQQ  1578


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1104  PVGE  1115
             PVGE
Sbjct  1618  PVGE  1621


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             DL E+I
Sbjct  1666  DLGEDI  1671


>ref|NP_715639.1|  interleukin-19 isoform 1 precursor [Homo sapiens]
Length=215

 GENE ID: 29949 IL19 | interleukin 19 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -1

Query  5221  EPNP---RKMS---NSF  5189
             EPNP   RK S   NSF
Sbjct  133   EPNPKILRKISSIANSF  149


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3249  FPHITMLS  3226
             FP +T LS
Sbjct  92    FPNVTILS  99


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3686  VYLAWV  3703
             V+LAW+
Sbjct  200   VFLAWI  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +2

Query  5957  TEVHNVWATH--ACVP  5998
             T VH    TH   CVP
Sbjct  18    THVH----THIHVCVP  29


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8037  ISAKDPFTN  8011
             I AKD F N
Sbjct  86    IQAKDTFPN  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  7511  LA--VERYLKDQQ  7543
             LA  V+R  KD+Q
Sbjct  120   LAFYVDRVFKDHQ  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5196  LDIFL  5210
             LD+FL
Sbjct  198   LDVFL  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  2784  WVMNSILI  2807
             W +  ILI
Sbjct  47    WLLGTILI  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3462  DMLLIEE  3482
             DM  IEE
Sbjct  71    DMHHIEE  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKR I
Sbjct  81    EIKRAI  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5856  LQII  5845
             LQII
Sbjct  104   LQII  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3255  GVFPH  3241
             G FPH
Sbjct  5     GAFPH  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  5820  HLHPHLHKC  5794
             H H H H C
Sbjct  19    HVHTHIHVC  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4804  IQEKET  4821
             IQ K+T
Sbjct  86    IQAKDT  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7092  DKLDVH  7109
             D L+VH
Sbjct  183   DQLEVH  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9056  HISSCFLP  9079
             H S C LP
Sbjct  9     HRSACSLP  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  602  MHTIE  588
            MH IE
Sbjct  72   MHHIE  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6061  FPHVKI  6044
             FP V I
Sbjct  92    FPNVTI  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  163   RQCHC  167


>ref|NP_005794.1|  flotillin-1 [Homo sapiens]
Length=427

 GENE ID: 10211 FLOT1 | flotillin 1 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 5/22 (22%)
 Frame = -1

Query  901  FS-MVFKSCGVAPSDNAENMGI  839
            FS  VFK   VA SD   NMGI
Sbjct  127  FSEQVFK---VASSDLV-NMGI  144


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5948  AYDTEV  5965
             AYD EV
Sbjct  222   AYDIEV  227


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1543  EIAGPL  1560
             EI GPL
Sbjct  367   EISGPL  372


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 5/22 (22%)
 Frame = +3

Query  897  LNTVGGHQ-AAM-QMLKETINE  956
            L T  GHQ A M +M   T+ E
Sbjct  101  LETLEGHQRAIMAHM---TVEE  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +2

Query  7490  KQLQARI---LAVERY  7528
             K+L+AR+      ERY
Sbjct  277   KELEARVRKPAEAERY  292


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3510  QQIRRLS  3530
             QQI R S
Sbjct  36    QQIQRIS  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3110  YQIYQE  3127
             +Q YQE
Sbjct  345   FQLYQE  350


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1495  ERLLSVSI  1518
             ERL  VSI
Sbjct  409   ERLTGVSI  416


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5791  SALVEMGV  5814
             S LV MG+
Sbjct  137   SDLVNMGI  144


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3161  RMRG  3172
             RMRG
Sbjct  317   RMRG  320


 Score = 16.3 bits (31),  Expect(2) = 32530
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  540  EGMVV  526
            E MVV
Sbjct  9    EAMVV  13


 Score = 15.1 bits (28),  Expect(2) = 32530
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  534  MVVAVPVFV  508
            MV    VFV
Sbjct  23   MVAGGRVFV  31


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  2897  LPNSISPLTSV  2865
             LP S+  LT V
Sbjct  404   LPESVERLTGV  414


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5004  YVLLDIH  4984
             Y L DIH
Sbjct  149   YTLKDIH  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6475  SIERL  6461
             S+ERL
Sbjct  407   SVERL  411


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2437  CITHIQ  2420
             CI +IQ
Sbjct  34    CIQQIQ  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3071  IAEIQKQGQ  3097
             IA++  QGQ
Sbjct  68    IAQVKIQGQ  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3554  AKLDKLL  3534
             A LD LL
Sbjct  352   AQLDMLL  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4942  AESEK  4928
             AE EK
Sbjct  298   AEAEK  302


>ref|NP_001287.2|  chemokine-binding protein 2 [Homo sapiens]
Length=384

 GENE ID: 1238 CCBP2 | chemokine binding protein 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = -2

Query  8193  FSS*LQYCRRFHQYLRA  8143
             FSS      RF QYL A
Sbjct  314   FSS-----HRFRQYLKA  325


 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = +2

Query  8072  YHRLR----DLLL--IV  8104
             YHRLR     LLL  IV
Sbjct  152   YHRLRTRAKSLLLATIV  168


 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = +2

Query  9071  FLPV-------LGLSG  9097
             FLPV       LGLSG
Sbjct  48    FLPVFYSLIFVLGLSG  63


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = -1

Query  6688  SFSCIVVGS-CTINFY  6644
             SF C  V    TINFY
Sbjct  114   SFLCKMVSTLYTINFY  129


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 10/26 (38%)
 Frame = -1

Query  4246  FFIHRFYYSLTLGIVGNSKF---LLD  4178
             FF+  F Y LTL       F   LLD
Sbjct  259   FFVLWFPYNLTL-------FLHTLLD  277


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  8293  ANSSTSSLYYF  8261
             A+S  SS YY+
Sbjct  15    ADSENSSFYYY  25


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  223  LWFPF  209
            LWFP+
Sbjct  262  LWFPY  266


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 14/34 (41%)
 Frame = -2

Query  4818  LFLLYADPNML--LLPI*HPL--------VGCVL  4747
             LFL +   N+L  LLP    L        +GCVL
Sbjct  208   LFLRF-QQNLLGFLLPL---LAMIFFYSRIGCVL  237


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  5303  VVAEFLLWLP  5274
             VVA F LW P
Sbjct  256   VVAFFVLWFP  265


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -2

Query  447  LPILYVLIYI  418
            LP+ Y LI++
Sbjct  49   LPVFYSLIFV  58


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3814  LMFILGL  3794
             L F+LGL
Sbjct  55    LIFVLGL  61


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  390  IRLRPGG  410
            +RLRP G
Sbjct  238  VRLRPAG  244


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  6683  FLYCCW--VLY  6657
             FL CC   +LY
Sbjct  302   FLHCCFSPILY  312


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = -2

Query  5730  PVYFSLS*YFPIF  5692
             PV++SL     IF
Sbjct  50    PVFYSL-----IF  57


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3131  MALDKF  3114
             M LDK+
Sbjct  138   MSLDKY  143


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8674  SRISCLL  8654
             SRI C L
Sbjct  231   SRIGCVL  237


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5719  FFVLIFSY  5696
             FFVL F Y
Sbjct  259   FFVLWFPY  266


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +1

Query  61   CLSLNKACLE  90
            C+SL+K  LE
Sbjct  137  CMSLDK-YLE  145


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  9146  CLSLNKACLE  9175
             C+SL+K  LE
Sbjct  137   CMSLDK-YLE  145


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4473  GFLLSL  4456
             GFLL L
Sbjct  218   GFLLPL  223


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5475  MKATLFTI  5452
             M  TL+TI
Sbjct  119   MVSTLYTI  126


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7400  IVWPV  7386
             IVW V
Sbjct  167   IVWAV  171


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  720  SQNYP  734
            S+NYP
Sbjct  370  SENYP  374


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = -2

Query  534  MVVAVPVFV----YSLLMFL  487
            +VVA   FV    Y L +FL
Sbjct  255  LVVAF--FVLWFPYNLTLFL  272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2268  VLYGFS  2251
             +LY FS
Sbjct  310   ILYAFS  315


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7893  TLFTI  7879
             TL+TI
Sbjct  122   TLYTI  126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6880  NCNAQF  6897
             NC A F
Sbjct  194   NCHADF  199


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 6/14 (42%)
 Frame = +2

Query  5306  LFIHFQNWVST*QN  5347
             LF  FQ      QN
Sbjct  208   LFLRFQ------QN  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             L+L IS
Sbjct  86    LNLAIS  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7070  LLFL  7059
             LLFL
Sbjct  93    LLFL  96


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/21 (33%), Positives = 7/21 (33%), Gaps = 11/21 (52%)
 Frame = +2

Query  2075  IGCTLNFPISPIETVPVKLKP  2137
             IGC L           V L P
Sbjct  233   IGCVL-----------VRLRP  242


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2304  LVLSFF  2287
             LV  FF
Sbjct  255   LVVAFF  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7690  LNTLLN  7707
             L TLL+
Sbjct  272   LHTLLD  277


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  9053  LHISSCFLPVL  9085
             LH   CF P+L
Sbjct  303   LH--CCFSPIL  311


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3735  CSFPPI  3718
             C F PI
Sbjct  305   CCFSPI  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8537  LLLLL  8523
             LLLL+
Sbjct  65    LLLLM  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1507  LTIFL  1493
             LT FL
Sbjct  268   LTLFL  272


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3224  TESI  3235
             TESI
Sbjct  297   TESI  300


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3744  LSTCS  3730
             LS CS
Sbjct  344   LSSCS  348


>ref|NP_001128145.1|  nuclear factor 1 A-type isoform 1 [Homo sapiens]
Length=509

 GENE ID: 4774 NFIA | nuclear factor I/A [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2084  TLNFPISPI  2110
             TL FP SPI
Sbjct  367   TLHFPTSPI  375


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query  2357  W-EVQLGIPHPAGLKK  2401
             W EV+ G P P  LKK
Sbjct  310   WHEVEPGMPSPTTLKK  325


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7848  TKPPT  7834
             TKPPT
Sbjct  456   TKPPT  460


 Score = 18.0 bits (35),  Expect(2) =  8069
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3756  LESGKYY  3776
             LES  YY
Sbjct  249   LESSSYY  255


 Score = 16.3 bits (31),  Expect(2) =  8069
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3637  IRVSQ  3651
             +RVSQ
Sbjct  229   VRVSQ  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  2513  PGIRYQYNVLPQ  2548
             P IRY+    PQ
Sbjct  386   PAIRYH----PQ  393


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  2088  KVQPI*VNRFLPI-ML  2044
             KV+    N FLP  ML
Sbjct  426   KVH----NPFLPTPML  437


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  438   PPPPPPP  444


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6979  FSTPST  6962
             +STPST
Sbjct  475   YSTPST  480


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5925  YFVH  5936
             YFVH
Sbjct  181   YFVH  184


 Score = 17.2 bits (33),  Expect(2) = 17493
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1127  MDNPG  1141
             MD PG
Sbjct  285   MDSPG  289


 Score = 15.5 bits (29),  Expect(2) = 17493
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1008  PGQMR  1022
             PG MR
Sbjct  259   PGAMR  263


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  909  PLCL  898
            PLCL
Sbjct  4    PLCL  7


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  7168  DLQTWRRRY  7194
             +LQ   R Y
Sbjct  32    NLQARKRKY  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5033  TSSINNTK  5056
             TSS   TK
Sbjct  269   TSSTSSTK  276


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7774  FVELV  7788
             FV+LV
Sbjct  399   FVQLV  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  3341  FVNTPPLVKLWY  3376
             FVN P     WY
Sbjct  496   FVNIPQQTQSWY  507


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6982  PFSTPST  6962
             P  TPST
Sbjct  361   PHATPST  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4196  IPYNPQ  4213
             I Y PQ
Sbjct  388   IRYHPQ  393


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8671  RISCL  8657
             RI CL
Sbjct  116   RIDCL  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  903  CL-----AWCLNLV  877
            CL      W L+LV
Sbjct  119  CLRQADKVWRLDLV  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8874  SPGHPSHA  8851
             SP +PS A
Sbjct  193   SPSQPSDA  200


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3792  SIPSKNST  3769
             S PS  ST
Sbjct  265   SLPSTSST  272


>ref|NP_055213.2|  lysosome-associated membrane glycoprotein 3 [Homo sapiens]
Length=416

 GENE ID: 27074 LAMP3 | lysosomal-associated membrane protein 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 6/15 (40%)
 Frame = +3

Query  6651  LIVQDPTTIQEKESV  6695
             LIVQD      KESV
Sbjct  246   LIVQD------KESV  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2903  IYPGIK  2920
             IY GIK
Sbjct  318   IYQGIK  323


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5287  KNSATT  5304
             KN ATT
Sbjct  92    KNTATT  97


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6982  PFSTPSTIKP  6953
             P+S P TI P
Sbjct  131   PYSLPPTITP  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1902  SSNTVS  1885
             SS TVS
Sbjct  148   SSSTVS  153


 Score = 15.9 bits (30),  Expect(2) = 39378
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4482  FQSGF  4468
             FQ GF
Sbjct  285   FQGGF  289


 Score = 15.1 bits (28),  Expect(2) = 39378
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  4567  FSSWHYF  4547
             FS   YF
Sbjct  255   FSPRRYF  261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2852  TVNDIQK  2872
             TV DI K
Sbjct  44    TVQDIKK  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3102  NGHIKF  3119
             +GHI F
Sbjct  70    DGHITF  75


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  6986  NNTEGSDTITLP  7021
             N T+ S+  TLP
Sbjct  158   NTTQPSNQTTLP  169


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  704  TQQSGQPKLP  733
            TQ S Q  LP
Sbjct  160  TQPSNQTTLP  169


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4662  LLNF  4651
             LLNF
Sbjct  282   LLNF  285


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8336  AKSFP  8322
             AK FP
Sbjct  27    AKAFP  31


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6910  PSTIKT  6893
             PS +KT
Sbjct  220   PSSVKT  225


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1699  QQPHQ  1713
             Q PHQ
Sbjct  58    QAPHQ  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +2

Query  3596  YALGIIQAQPDQS  3634
             Y L   QA P+ S
Sbjct  102   YTLVTTQATPNNS  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3846  LAIALQ  3829
             L IAL+
Sbjct  172   LSIALH  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  978   VHPVHAGPIAPG  1013
             V+P H    APG
Sbjct  186   VQPTH----APG  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6211  HSPATT  6194
             H P TT
Sbjct  190   HAPGTT  195


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7060  RKSN  7071
             RKSN
Sbjct  277   RKSN  280


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8939  MQLSGH  8922
             +QLS H
Sbjct  345   LQLSAH  350


>sp|P10144.1|GRAB_HUMAN  RecName: Full=Granzyme B; AltName: Full=Granzyme-2; AltName: 
Full=T-cell serine protease 1-3E; AltName: Full=Cytotoxic T-lymphocyte 
proteinase 2; Short=Lymphocyte protease; AltName: 
Full=SECT; AltName: Full=Cathepsin G-like 1; Short=CTSGL1; 
AltName: Full=CTLA-1; AltName: Full=Fragmentin-2; AltName: Full=Human 
lymphocyte protein; Short=HLP; AltName: Full=C11; 
Flags: Precursor
Length=247

 GENE ID: 3002 GZMB | granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated
serine esterase 1) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  8696  LCVVDPQIK  8670
             LCV DP+IK
Sbjct  187   LCVGDPEIK  195


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 10/24 (41%)
 Frame = -3

Query  2426  HPVLLLIFSFLTLRDVVFLIELPR  2355
             +P+LLL   FL L        LPR
Sbjct  2     QPILLLL-AFL-L--------LPR  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6029  PILLL  6015
             PILLL
Sbjct  3     PILLL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4637  PHPVYLPHN  4611
             PHP Y P N
Sbjct  96    PHPAYNPKN  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  7620  LLLQLAF  7600
             LLL LAF
Sbjct  5     LLL-LAF  10


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7318  SFVPWV  7335
             SFV W+
Sbjct  235   SFVHWI  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7438  QQIVLLL  7418
             Q I LLL
Sbjct  2     QPILLLL  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4707  RHHYES  4724
             RH Y+S
Sbjct  178   RHYYDS  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4784  YYQSSI  4767
             YY S I
Sbjct  180   YYDSTI  185


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6380  ACPKVS  6397
             AC KVS
Sbjct  229   ACTKVS  234


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  7754  PIILVHSFL  7728
             PI L   FL
Sbjct  3     PILLLLAFL  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3080  FLLL  3069
             FLLL
Sbjct  10    FLLL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  906  VGGHQA  923
            +GGH+A
Sbjct  22   IGGHEA  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7620  LLLQL  7606
             +LLQL
Sbjct  110   MLLQL  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  6470  NGTGP--CTNVS  6499
             NG  P  CT VS
Sbjct  223   NGMPPRACTKVS  234


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2819  QPIVL  2833
             QPI L
Sbjct  2     QPILL  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6227  EIKNCSF  6247
             EIK  SF
Sbjct  193   EIKKTSF  199


>ref|NP_077305.2|  EF-hand domain-containing protein D2 [Homo sapiens]
Length=240

 GENE ID: 79180 EFHD2 | EF-hand domain family, member D2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 3/21 (14%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLR---LN  7445
             E L   DCEL   LLR   LN
Sbjct  46    EALGSADCELSAKLLRRADLN  66


 Score = 21.0 bits (42),  Expect(2) =   856
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  8895  FDSRLAFHHVARE  8933
             FDS L F    RE
Sbjct  144   FDSKLSF----RE  152


 Score = 18.0 bits (35),  Expect(2) =   856
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8933  AASGVLQE  8956
             AA G LQE
Sbjct  160   AAAGELQE  167


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +1

Query  4675  MF-Q---GKLGDGFID  4710
             MF Q   G   DGFID
Sbjct  100   MFKQYDAGR--DGFID  113


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +1

Query  1906  EFARK----ME  1926
             EF RK    ME
Sbjct  88    EFSRKQIKDME  98


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +1

Query  8131  QGVGSPQILVESP  8169
             QG+G PQ    SP
Sbjct  67    QGIGEPQ----SP  75


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5943  LKHMI  5957
             LK MI
Sbjct  133   LKNMI  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2177  EEKIKA  2194
             EE IKA
Sbjct  208   EEEIKA  213


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  743  EHPGANG  763
            E+PG NG
Sbjct  26   EQPGLNG  32


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5716  FVLIF  5702
             F LIF
Sbjct  153   FLLIF  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -1

Query  7474  ELQQMLLRLNSPQ  7436
             EL  M+  L  PQ
Sbjct  116   ELKLMMEKLGAPQ  128


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8975  LQGTF  8989
             LQ TF
Sbjct  235   LQSTF  239


>sp|P14222.1|PERF_HUMAN  RecName: Full=Perforin-1; Short=P1; AltName: Full=Lymphocyte 
pore-forming protein; Short=PFP; AltName: Full=Cytolysin; Flags: 
Precursor
Length=555

 GENE ID: 5551 PRF1 | perforin 1 (pore forming protein) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -3

Query  2576  GILLVILSIPVEAHC  2532
             GILL  L  PV A C
Sbjct  9     GILLLLLPLPVPAPC  23


 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 6/22 (27%)
 Frame = +2

Query  7766  WASLW-NWFNITN-WLWYIKLF  7825
             W  LW +WF  T+    Y+KLF
Sbjct  425   WG-LWGDWFTATDA---YVKLF  442


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  3762  IPALTNLSTC  3733
             I ALT L TC
Sbjct  233   ISALTALRTC  242


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  1718  ELQ---VWGRDNNSP  1753
             EL    VW  DNN P
Sbjct  447   ELRTSTVW--DNNNP  459


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2730  GDLPHQ  2747
             GDLPH+
Sbjct  198   GDLPHH  203


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6008  WGLW  5997
             WGLW
Sbjct  425   WGLW  428


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  524  LSQYL  510
            LSQYL
Sbjct  364  LSQYL  368


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3344  VNTPPL  3361
             V TPPL
Sbjct  184   VHTPPL  189


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6474  PLNVLL  6457
             PL VLL
Sbjct  345   PLHVLL  350


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8643  LALPVP  8626
             L LPVP
Sbjct  15    LPLPVP  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  408  PLALT  394
            PLALT
Sbjct  89   PLALT  93


 Score = 17.2 bits (33),  Expect(2) = 16938
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8623  RGDWK  8637
             R DWK
Sbjct  126   RNDWK  130


 Score = 15.5 bits (29),  Expect(2) = 16938
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8722  THQGQ  8736
             THQ Q
Sbjct  162   THQDQ  166


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4134  LLPLSV  4117
             LLPL V
Sbjct  14    LLPLPV  19


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -3

Query  3044  LHVLVLLES  3018
             LHV  LL+S
Sbjct  346   LHV--LLDS  352


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6246  SISAQA  6263
             SISA+A
Sbjct  271   SISAEA  276


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3611  IQAQPDQ  3631
             IQA P+Q
Sbjct  318   IQAGPEQ  324


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1733  PRPEAL  1716
             PR EAL
Sbjct  355   PRREAL  360


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/21 (33%), Positives = 8/21 (38%), Gaps = 12/21 (57%)
 Frame = +2

Query  3464  YVTNR------------GRQK  3490
             Y T+R            GRQK
Sbjct  367   YLTDRARWRDCSRPCPPGRQK  387


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8183  QELKNSAV  8206
             QEL  S V
Sbjct  446   QELRTSTV  453


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3751  QCWNQES  3771
             Q W+Q+S
Sbjct  481   QVWDQDS  487


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1448  KFSYH  1462
             KF YH
Sbjct  518   KFRYH  522


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6842  FYYFQIV  6822
             FY F++V
Sbjct  178   FYSFHVV  184


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8913  FHHVARELHPE  8945
             FH+  RE H E
Sbjct  292   FHQTYRERHSE  302


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4791  MLLLP  4777
             +LLLP
Sbjct  12    LLLLP  16


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QR PL
Sbjct  86    QRLPL  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  455  ARTIR  469
            AR IR
Sbjct  122  ARSIR  126


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3997  QDNFSF  3980
             QD +SF
Sbjct  164   QDQYSF  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2647  HVLID  2633
             HVL D
Sbjct  347   HVLLD  351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2157  LNNGH  2171
             LN GH
Sbjct  512   LNHGH  516


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3105  GHIKF  3119
             GH KF
Sbjct  515   GHLKF  519


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5013  GSLQYLALA  5039
             G LQ L LA
Sbjct  83    GTLQRLPLA  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6288  YSFCT  6274
             YSF T
Sbjct  167   YSFST  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1791  LTSLR  1805
             LT LR
Sbjct  236   LTALR  240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5138  REPHNE  5155
             RE H E
Sbjct  297   RERHSE  302


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  330   NSLPG  334


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1936  DRGNWR  1953
             DR  WR
Sbjct  370   DRARWR  375


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4265  QVRDQ  4279
             QV DQ
Sbjct  481   QVWDQ  485


>ref|NP_640336.1|  adenosine deaminase domain-containing protein 1 isoform 1 [Homo 
sapiens]
Length=576

 GENE ID: 132612 ADAD1 | adenosine deaminase domain containing 1
(testis-specific) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  1241  FIEPVYI  1221
             FI+PVYI
Sbjct  405   FIQPVYI  411


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5507  PKAFVMK  5487
             PK F+MK
Sbjct  83    PKEFIMK  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2725  EVGTYH  2742
             E GTYH
Sbjct  531   EAGTYH  536


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4093  KMASK  4107
             KMASK
Sbjct  48    KMASK  52


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3238  YYAFC  3224
             Y+AFC
Sbjct  127   YFAFC  131


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1092  YLSSIL  1075
             Y SSIL
Sbjct  410   YISSIL  415


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  7105  FI-KYYRAAIN  7134
             FI KY R  IN
Sbjct  86    FIMKYKRGEIN  96


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -1

Query  8959  QFLKYSGCSS  8930
             ++LKYS  SS
Sbjct  226   EYLKYS--SS  233


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1772  YRLLLL  1755
             YR LLL
Sbjct  286   YRQLLL  291


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  2906  KSDL---PNSIS  2880
             KS L   P SIS
Sbjct  337   KSQLRLNPHSIS  348


 Score = 16.8 bits (32),  Expect(2) = 24039
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  5212  PRKMSNSFILK  5180
             P K    FI+K
Sbjct  79    PKKIPKEFIMK  89


 Score = 15.1 bits (28),  Expect(2) = 24039
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5283  MASTPAQV  5260
             MAS   QV
Sbjct  49    MASKVTQV  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/24 (33%), Positives = 10/24 (41%), Gaps = 12/24 (50%)
 Frame = +2

Query  2768  PPFLWMGYELHPDKWTVQPIVLPE  2839
             PPF        P     +P+VL E
Sbjct  179   PPF--------P----AEPVVLSE  190


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 15/30 (50%)
 Frame = -1

Query  4294  LKMF--------SLI--SY-----LSYNFL  4250
             L MF        SL+   Y     L Y FL
Sbjct  443   LPMFYLVNRPHISLVPSAYPLQMNLEYKFL  472


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8462  MFFQVSR  8442
             MF+ V R
Sbjct  445   MFYLVNR  451


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3955  MATRL  3969
             MA RL
Sbjct  505   MASRL  509


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 21/44 (47%)
 Frame = +2

Query  3836  AMASDFNLPPVVAKEI-----------VASC-------DKCQLK  3913
             AM S FNL    AKE             A C        KC LK
Sbjct  513   AMLSRFNL---LAKEAKKELLEAGTYHAAKCMSASYQEAKCKLK  553


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6739  YFSYC  6725
             YF +C
Sbjct  127   YFAFC  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8859  MDDPEREVLE  8888
             +D+PE  +LE
Sbjct  165   LDEPEPRILE  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3256  RSLSPYYY  3233
             RSL  Y+Y
Sbjct  279   RSLLRYFY  286


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1125  RWIILG  1142
             RW +LG
Sbjct  391   RWEVLG  396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6401  QRIPLD  6384
             QR+ LD
Sbjct  108   QRVQLD  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  368  RIRSM  382
            RI SM
Sbjct  379  RISSM  383


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  7699  LLN*RIAKPARKE  7737
             LL    AK A KE
Sbjct  520   LL----AKEAKKE  528


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 11/20 (55%)
 Frame = +3

Query  3714  KELEEMNK*IN*SVLESGKY  3773
             KEL           LE G Y
Sbjct  527   KEL-----------LEAGTY  535


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2692  SMLPYF  2675
             S+L YF
Sbjct  280   SLLRYF  285


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  936  LKETIN  953
            LK+ IN
Sbjct  316  LKQNIN  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7010  LCHFLQ  6993
             L HF Q
Sbjct  402   LSHFIQ  407


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2796  SILI  2807
             SILI
Sbjct  413   SILI  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9075  KKQLL  9061
             KK+LL
Sbjct  526   KKELL  530


>ref|NP_002913.3|  regulator of G-protein signaling 1 [Homo sapiens]
Length=209

 GENE ID: 5996 RGS1 | regulator of G-protein signaling 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  5835  RSMVPHL  5815
             RSM+PHL
Sbjct  55    RSMIPHL  61


 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -2

Query  7884  TIESTAKTILKPTKPPT  7834
             T ESTAK I    K PT
Sbjct  155   TRESTAKKI----KAPT  167


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 8/19 (42%)
 Frame = +1

Query  8812  IKERTPAC--------YTL  8844
             IK  TP C        YTL
Sbjct  163   IKAPTPTCFDEAQKVIYTL  181


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  2601  SLLENKIQ  2624
             SLL++K Q
Sbjct  32    SLLDDKMQ  39


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6703  RTRES  6717
             RTRES
Sbjct  154   RTRES  158


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8186  ELKNSAVSLLN  8218
             ELK    SLL+
Sbjct  25    ELKGTTHSLLD  35


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3548  LDKLLVTQ  3525
             L+KLL  Q
Sbjct  86    LEKLLANQ  93


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  3566  IPNPAKLDKL  3537
             I  P KLDK+
Sbjct  6     ISTP-KLDKM  14


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5927  IEWWL  5913
             IE WL
Sbjct  112   IEFWL  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  290  VSTPK  304
            +STPK
Sbjct  6    ISTPK  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8672  KDILS  8658
             KD+LS
Sbjct  71    KDVLS  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  7573  FSRATPNPQEL  7541
             FS    NP EL
Sbjct  19    FS---ANPKEL  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5507  PKAFVM  5490
             PK F M
Sbjct  43    PKTFGM  48


>ref|NP_569708.1|  C-type lectin domain family 4 member C isoform 1 [Homo sapiens]
Length=213

 GENE ID: 170482 CLEC4C | C-type lectin domain family 4, member C [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 12/26 (46%)
 Frame = -1

Query  4045  WNNF---CFYISTGYM--------NC  4001
             W  F   C++ISTG M        NC
Sbjct  87    WTSFQSSCYFISTG-MQSWTKSQKNC  111


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5238  CCPKPW  5221
             CCP PW
Sbjct  82    CCPTPW  87


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6813  LLAICFKV  6790
             LL +CF V
Sbjct  31    LLSVCFTV  38


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5757  RRQWQ  5771
             RR+WQ
Sbjct  150   RRHWQ  154


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  4639  ILILSTCHTI  4610
             IL LS C T+
Sbjct  29    ILLLSVCFTV  38


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7687  CVIVNF  7670
             C I+NF
Sbjct  180   CAIINF  185


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7469  QLTVW  7483
             QL VW
Sbjct  18    QLKVW  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4850  MEEKEI  4867
             ME K+I
Sbjct  72    MEGKDI  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2855  QSSCLF  2838
             QSSC F
Sbjct  91    QSSCYF  96


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             W K QK
Sbjct  104   WTKSQK  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3032  VLLESLCF  3009
             +LL S CF
Sbjct  29    ILLLSVCF  36


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8537  LLLLLCF  8517
             LLL  CF
Sbjct  30    LLLSVCF  36


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1961  KVRQYDQ  1981
             K R+Y Q
Sbjct  57    KLREYQQ  63


 Score = 15.5 bits (29),  Expect(2) = 62666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4319  IHNFKR  4336
             I+N KR
Sbjct  131   IQNLKR  136


 Score = 15.1 bits (28),  Expect(2) = 62666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4192  WNSLQS  4209
             W S QS
Sbjct  87    WTSFQS  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6918  STVIQHN  6938
             S V+ HN
Sbjct  39    SSVVPHN  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5880  VTHNF  5866
             V HNF
Sbjct  42    VPHNF  46


>pdb|1N1F|A  Chain A, Crystal Structure Of Human Interleukin-19
Length=159


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -1

Query  5221  EPNP---RKMS---NSF  5189
             EPNP   RK S   NSF
Sbjct  77    EPNPKILRKISSIANSF  93


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3249  FPHITMLS  3226
             FP +T LS
Sbjct  36    FPNVTILS  43


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3686  VYLAWV  3703
             V+LAW+
Sbjct  144   VFLAWI  149


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8037  ISAKDPFTN  8011
             I AKD F N
Sbjct  30    IQAKDTFPN  38


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  7511  LA--VERYLKDQQ  7543
             LA  V+R  KD+Q
Sbjct  64    LAFYVDRVFKDHQ  76


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5196  LDIFL  5210
             LD+FL
Sbjct  142   LDVFL  146


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3462  DMLLIEE  3482
             DM  IEE
Sbjct  15    DMHHIEE  21


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKR I
Sbjct  25    EIKRAI  30


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5856  LQII  5845
             LQII
Sbjct  48    LQII  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4804  IQEKET  4821
             IQ K+T
Sbjct  30    IQAKDT  35


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7092  DKLDVH  7109
             D L+VH
Sbjct  127   DQLEVH  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  602  MHTIE  588
            MH IE
Sbjct  16   MHHIE  20


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6061  FPHVKI  6044
             FP V I
Sbjct  36    FPNVTI  41


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  107   RQCHC  111


>sp|Q14330.2|GPR18_HUMAN  RecName: Full=N-arachidonyl glycine receptor; Short=NAGly receptor; 
AltName: Full=G-protein coupled receptor 18
Length=331

 GENE ID: 2841 GPR18 | G protein-coupled receptor 18 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 21/41 (51%)
 Frame = -2

Query  6639  VFSC--------TI-MVLALSVKLTDLI---TTSSSARLPF  6553
             VFSC        TI M   + V L DLI   T      LPF
Sbjct  46    VFSCTTKKRTTVTIYM---MNVALVDLIFIMT------LPF  77


 Score = 24.4 bits (50),  Expect =   168
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 9/31 (29%)
 Frame = -2

Query  6849  IIVLLFPNCSLNLLAICFKVLFH--FALLML  6763
             II LL        L +CF   FH  FA LML
Sbjct  234   IITLL-----VQVL-VCFMP-FHICFAFLML  257


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7814  IKLFIMI  7834
             I LFIMI
Sbjct  198   IPLFIMI  204


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7490  KQLQARILAV  7519
             KQ QAR+  V
Sbjct  291   KQFQARVISV  300


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4818  LFLLYADPN  4792
             L LLY DP+
Sbjct  156   LLLLYKDPD  164


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6558  PFNSS  6544
             PFNSS
Sbjct  12    PFNSS  16


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4537  IILYY  4523
             +ILYY
Sbjct  283   VILYY  287


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
 Frame = -2

Query  4257  IFFNSLFIDSTTP*LW  4210
             IF   LF++ T   LW
Sbjct  32    IFIIGLFVNITA--LW  45


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -2

Query  2310  LHLV-LSFFFM  2281
             L L  L FFF+
Sbjct  187   LNLTRLTFFFL  197


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  806  FYPCI  792
            FY CI
Sbjct  28   FYSCI  32


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  402  ALTEFFP-IDL  373
            ALT F+P I L
Sbjct  99   ALTVFYPSIAL  109


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 44/68 (64%)
 Frame = +2

Query  2126  KLKPGMDGPKVKQWPLTEEK-----IKALVE---------IC-------TEMEKEGKISK  2242
             KLKP     KVK      EK     I  LV+         IC       T          
Sbjct  221   KLKP-----KVK------EKSIRIIITLLVQVLVCFMPFHICFAFLMLGT----------  259

Query  2243  IGPENPYN  2266
              G EN YN
Sbjct  260   -G-ENSYN  265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1593  LPFHI  1579
             +PFHI
Sbjct  246   MPFHI  250


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3196  LFYIIS  3179
             L+YI+S
Sbjct  285   LYYIVS  290


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  6475  SIERLIIT  6452
             SI R IIT
Sbjct  230   SI-RIIIT  236


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = +1

Query  3949  RNMATRLYTFRRKSY  3993
             R M       RRKS+
Sbjct  308   RSM-------RRKSF  315


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/29 (24%), Positives = 8/29 (27%), Gaps = 20/29 (68%)
 Frame = -3

Query  818  LFYY--------------------FYPCI  792
            +FYY                    FYP I
Sbjct  79   MFYYAKDEWPFGEYFCQILGALTVFYPSI  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  8186  ELKNS--AV  8206
             ELKN   AV
Sbjct  131   ELKNTCKAV  139


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -1

Query  7165  GLIVAITTI---SC  7133
             GL V IT     SC
Sbjct  36    GLFVNITALWVFSC  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3218  FFALPLLI  3195
             FF  PL I
Sbjct  195   FFLIPLFI  202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8908  RRLSNLHS  8885
             R LSN  S
Sbjct  321   RSLSNINS  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2701  YFCSML  2684
             YFC  L
Sbjct  92    YFCQIL  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4313  VFIHN  4327
             V IHN
Sbjct  209   VIIHN  213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 6/16 (37%)
 Frame = +3

Query  8193  RIVL------LACSMP  8222
             RI+       L C MP
Sbjct  232   RIIITLLVQVLVCFMP  247


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3808  FILGL  3794
             FI GL
Sbjct  33    FIIGL  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3907  LTFITA  3890
             L FI A
Sbjct  112   LAFISA  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 8/28 (28%)
 Frame = -1

Query  574  LYNDLSSSDPV*RDGCSCPSICLQPSDV  491
            LY D    D    D  S P  CL  SD+
Sbjct  159  LYKD---PD---KD--STPATCLKISDI  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  940  FNICMA  923
            F IC A
Sbjct  248  FHICFA  253


>pdb|1O0V|A  Chain A, The Crystal Structure Of Ige Fc Reveals An Asymmetrically 
Bent Conformation
 pdb|1O0V|B  Chain B, The Crystal Structure Of Ige Fc Reveals An Asymmetrically 
Bent Conformation
Length=327


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 9/25 (36%)
 Frame = +1

Query  2029  RTYTCQ-----HNW----KKSVDSD  2076
             RTYTCQ     H      KK  DS+
Sbjct  88    RTYTCQVTYQGHTFEDSTKKCADSN  112


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4560  EEKQR  4574
             EEKQR
Sbjct  169   EEKQR  173


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 12/26 (46%)
 Frame = -1

Query  6973  TPSTIK------------PSTIKQLC  6932
             TP T+K            P TI  LC
Sbjct  9     TPPTVKILQSSCDGGGHFPPTIQLLC  34


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  471  VNPGL  485
            VNPGL
Sbjct  323  VNPGL  327


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  8962  DIELATRDF  8988
             DI  A RDF
Sbjct  1     DI-VASRDF  8


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -3

Query  8774  LV---APSKG  8754
             LV   APSKG
Sbjct  139   LVVDLAPSKG  148


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  9043  ARHSPVPPR  9017
             ARHS   PR
Sbjct  268   ARHSTTQPR  276


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  7690  ACVIVNF-----SVP-LH  7655
             AC I NF     SV  LH
Sbjct  243   ACLIQNFMPEDISVQWLH  260


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5115  PQKTKG  5132
             P KTKG
Sbjct  275   PRKTKG  280


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -2

Query  3969  QSSC----HIP  3949
             QSSC    H P
Sbjct  17    QSSCDGGGHFP  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  132  YQSHT  118
            YQ HT
Sbjct  96   YQGHT  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QR V
Sbjct  316   TVQRAV  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5340  SRIGVTR  5360
             SR  VTR
Sbjct  287   SRLEVTR  293


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3350  TPPLVK  3367
             TPP VK
Sbjct  9     TPPTVK  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6913  FPSTI  6899
             FP TI
Sbjct  26    FPPTI  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5405  PGSIQ  5419
             PG IQ
Sbjct  41    PGTIQ  45


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R EEK+
Sbjct  167   RKEEKQ  172


>ref|NP_075571.1|  calpain-10 isoform a [Homo sapiens]
Length=672

 GENE ID: 11132 CAPN10 | calpain 10 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 9/19 (47%)
 Frame = +3

Query  8526  EEEE---------VGFPVT  8555
             EEEE         VG+PVT
Sbjct  304   EEEEFLREFDELTVGYPVT  322


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5282  WLPLLPK  5262
             WLPLL K
Sbjct  147   WLPLLEK  153


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5948  AYDTEVH  5968
             AYD EVH
Sbjct  450   AYDREVH  456


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  8392  LTVGHPIT  8369
             LTVG P+T
Sbjct  315   LTVGYPVT  322


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5789  YQHLW  5803
             Y+HLW
Sbjct  162   YEHLW  166


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 19/44 (43%)
 Frame = +2

Query  8045  DLRSL------CLFSYHRLRDLLLIVTRIVELLGRRGWEALKYW  8158
             DLR L      C         LLL   RI    GRR W+ L  W
Sbjct  244   DLRELQGQAGQCI--------LLL---RIQNPWGRRCWQGL--W  274


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  7809  HSQFVMLNQF  7780
             HSQ  ML QF
Sbjct  652   HSQ-EMLGQF  660


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1810  SDLREVKG  1787
             SDLRE  G
Sbjct  243   SDLRELQG  250


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  3640  RVSQSNNRAVNK  3675
             RVS S  RAV K
Sbjct  490   RVSLSAIRAVAK  501


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2725  QQMLSQLL  2702
             Q+ML Q L
Sbjct  654   QEMLGQFL  661


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7177  TWRR  7188
             TWRR
Sbjct  42    TWRR  45


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9146  SGFPS  9132
             SGFPS
Sbjct  359   SGFPS  363


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  61   SGFPS  47
            SGFPS
Sbjct  359  SGFPS  363


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7571  FQSNPK  7554
             F SNPK
Sbjct  361   FPSNPK  366


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  8887  SNTSLSGSSIP  8855
             S TS S  SIP
Sbjct  403   SHTSWSPASIP  413


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1939  RGNWR  1953
             RG WR
Sbjct  520   RGSWR  524


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5905  PHRY  5894
             PHRY
Sbjct  605   PHRY  608


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3521  SDLLCQL  3501
             S+LL QL
Sbjct  290   SELLSQL  296


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3240  YGERLL  3257
             Y ERLL
Sbjct  331   YTERLL  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  980   ASSACRAY  1003
             A  AC AY
Sbjct  444   AGTACHAY  451


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  396  TEFFPI  379
            TEF PI
Sbjct  570  TEFHPI  575


 Score = 16.8 bits (32),  Expect(2) = 22608
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1847  GQLKEALL  1870
             GQ K+ LL
Sbjct  63    GQVKQGLL  70


 Score = 15.1 bits (28),  Expect(2) = 22608
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1809  LFGNDP  1826
             LF +DP
Sbjct  55    LFPDDP  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  284  AAPRLLP  264
            A PRL P
Sbjct  51   ATPRLFP  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6521  FHVYIV  6504
             FH +IV
Sbjct  237   FHAFIV  242


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7008  VSLPSVL  6988
             V LP VL
Sbjct  432   VNLPRVL  438


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6078  RCMRI  6092
             RC RI
Sbjct  555   RCVRI  559


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6396  PLSQF  6410
             PL QF
Sbjct  33    PLAQF  37


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  504  CRQIL  518
            CRQ L
Sbjct  208  CRQLL  212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  111  RLLC  122
            RLLC
Sbjct  334  RLLC  337


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8452  RSRDAAP  8432
             RS DA P
Sbjct  587   RSQDAPP  593


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4539  LLSCI  4525
             LLSC+
Sbjct  600   LLSCV  604


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2200  RNLYRD  2217
             R L+RD
Sbjct  11    RELFRD  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4245  SLFIDSTTP  4219
             SLF D  TP
Sbjct  25    SLFCDLSTP  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7335  SWEQQE  7352
             SW  QE
Sbjct  99    SWADQE  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1866  RASFSC  1849
             R SF C
Sbjct  106   RGSFTC  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6803  IASKLRE  6823
             I S LRE
Sbjct  241   IVSDLRE  247


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5294  EFLL  5283
             EFLL
Sbjct  480   EFLL  483


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8946  TPDAAL  8929
             TP AAL
Sbjct  504   TPGAAL  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2891  WASQIYPG  2914
             WA Q Y G
Sbjct  100   WADQEYRG  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  7533  RINSSWG  7553
             RI   WG
Sbjct  260   RIQNPWG  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -2

Query  4788  LLLPI*HPLVGCV  4750
             LLL    PL  CV
Sbjct  594   LLLQE--PLLSCV  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5460  FTIAIGT  5440
             FT+ I T
Sbjct  638   FTVTIAT  644


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  7525  SFHSQDSCLELL  7490
             S HSQ    E+L
Sbjct  650   SIHSQ----EML  657


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8871  PGHPS  8857
             PG+PS
Sbjct  95    PGQPS  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8192  LVPDSNT  8172
             LV DS T
Sbjct  399   LVGDSHT  405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7134  QEMVVIATM  7160
             QE  V A M
Sbjct  662   QEVSVMAVM  670


>sp|P15056.4|BRAF_HUMAN  RecName: Full=Serine/threonine-protein kinase B-raf; AltName: 
Full=Proto-oncogene B-Raf; AltName: Full=p94; AltName: Full=v-Raf 
murine sarcoma viral oncogene homolog B1
Length=766

 GENE ID: 673 BRAF | v-raf murine sarcoma viral oncogene homolog B1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.8 bits (51),  Expect =   125
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = -3

Query  7574  VFQ-------SNPKSP  7548
             VFQ       SNPKSP
Sbjct  137   VFQNPTDVARSNPKSP  152


 Score = 20.6 bits (41),  Expect(2) =   843
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4722  FHSDVY  4705
             F+SDVY
Sbjct  635   FQSDVY  640


 Score = 18.0 bits (35),  Expect(2) =   843
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -2

Query  4854  SILW------RLPDPN  4825
             SILW      R+ D N
Sbjct  616   SILWMAPEVIRMQDKN  631


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +1

Query  1399  DPAIRQEFW-LKQ  1434
             DPAI +E W  KQ
Sbjct  40    DPAIPEEVWNIKQ  52


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  4604  LPS---VFHNP  4581
             LPS   VF+NP
Sbjct  131   LPSSLSVFQNP  141


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7478  VWGIKQL  7498
             VW IKQ+
Sbjct  47    VWNIKQM  53


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8951  EVLRMQ  8934
             EV RMQ
Sbjct  623   EVIRMQ  628


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6235  KLLFQ  6249
             KLLFQ
Sbjct  253   KLLFQ  257


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5129  GPQRE  5143
             GPQRE
Sbjct  421   GPQRE  425


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  831  PEVIPM  848
            PEVI M
Sbjct  622  PEVIRM  627


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6297  KNAYSF  6280
             KN YSF
Sbjct  630   KNPYSF  635


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8296  VANSSTSSL  8270
             V  SS SSL
Sbjct  120   VTSSSSSSL  128


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7189  SSSRSED  7169
             SSS SED
Sbjct  428   SSSSSED  434


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1859  EALLD  1873
             EALLD
Sbjct  62    EALLD  66


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = +1

Query  1288  QKPCWSKMRTQIVRLF  1335
             QKP        IVR F
Sbjct  153   QKP--------IVRVF  160


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1770  SAPASE  1753
             SAPAS+
Sbjct  319   SAPASD  324


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +2

Query  716  GQPKLPYS  739
            GQ  LPYS
Sbjct  652  GQ--LPYS  657


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +3

Query  4728  HPRISSEVHIPL  4763
             H R S EV  PL
Sbjct  269   HQRCSTEV--PL  278


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  299  PKILTS  316
            P ILTS
Sbjct  328  PQILTS  333


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 3/17 (17%)
 Frame = -2

Query  2046  LTGVGPTNTVPIALCPQ  1996
             LT   P   +PI   PQ
Sbjct  331   LTSPSPSKSIPI---PQ  344


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2362  FPEVLSS  2342
             FP++L S
Sbjct  707   FPQILAS  713


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  6591  DLITTSSSARL  6559
             D +T SSS  L
Sbjct  118   DTVTSSSSSSL  128


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5470  FHCQVC  5487
             F CQ C
Sbjct  259   FRCQTC  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  8146  PQILVESP  8169
             PQIL  SP
Sbjct  328   PQILT-SP  334


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1076  RMDDK  1090
             RM DK
Sbjct  626   RMQDK  630


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5308  QQLLQ  5294
             QQLL+
Sbjct  97    QQLLE  101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  135   LSVFQ  139


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1683  EENSLA  1666
             EE SLA
Sbjct  303   EEASLA  308


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -3

Query  7664  PTPSRSCDSKSVP  7626
             P PS     KS+P
Sbjct  334   PSPS-----KSIP  341


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8749  GYLTP  8735
             GYL P
Sbjct  672   GYLSP  676


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7580  CTTAVP  7597
             C T VP
Sbjct  272   CSTEVP  277


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7469  ATDAVAPQ  7446
             A D + PQ
Sbjct  322   ASDSIGPQ  329


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  1174  PAFWT*DKDQRN  1209
             PA    D D+RN
Sbjct  348   PA----DEDHRN  355


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7558  PNPQEL  7541
             P PQ+L
Sbjct  490   PTPQQL  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2777  LWMGY  2791
             L MGY
Sbjct  515   LFMGY  519


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +3

Query  5187  M-KLLDI  5204
             M KL DI
Sbjct  550   MIKLIDI  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  194  RDLK  205
            RDLK
Sbjct  575  RDLK  578


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6622  YGFSIV  6605
             Y F IV
Sbjct  640   YAFGIV  645


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1342  AFKIVL  1325
             AF IVL
Sbjct  641   AFGIVL  646


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1618  RDRLIF  1635
             RD  IF
Sbjct  662   RDQIIF  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8114  VELLGR  8131
             +ELL R
Sbjct  714   IELLAR  719


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4640  NPHPVYL  4620
             NP  +YL
Sbjct  73    NPPSIYL  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             R QFG
Sbjct  354   RNQFG  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5718  KNRQVN  5735
             K R+VN
Sbjct  507   KTRHVN  512


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6611  AKTII  6625
             AK II
Sbjct  569   AKSII  573


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3596  YALGII  3613
             YA GI+
Sbjct  640   YAFGIV  645


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8196  IVLLACSMP  8222
             I LLA S+P
Sbjct  714   IELLARSLP  722


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  815  REGFQ  829
            R GFQ
Sbjct  735  RAGFQ  739


>gb|ABG38378.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   133
 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 9/34 (26%)
 Frame = +2

Query  7004  DTITLPCRIKQ-IIN--MW--QKVGKA----MYA  7078
             D IT  CR  Q I N   W  QK GKA     YA
Sbjct  17    DRITITCRASQGIRNDLGWYQQKPGKAPKRLIYA  50


 Score = 21.0 bits (42),  Expect(2) =   133
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             E TQSPS
Sbjct  3     EMTQSPS  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  74    TISSLQPEDFATYYCL  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YP TFG
Sbjct  94    YPRTFG  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4814  KRLAFGSGSLH  4846
             KRL +   SL+
Sbjct  45    KRLIYAASSLQ  55


>ref|NP_742086.1|  TNFSF12-TNFSF13 protein [Homo sapiens]
Length=330

 GENE ID: 407977 TNFSF12-TNFSF13 | TNFSF12-TNFSF13 readthrough [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.8 bits (44),  Expect(2) =   145
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 8/23 (34%)
 Frame = +1

Query  6535  INSTA--------VKWQSSRRRG  6579
             IN T         V WQ   RRG
Sbjct  203   INATSKDDSDVTEVMWQPALRRG  225


 Score = 20.2 bits (40),  Expect(2) =   145
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6693  VSREDQG  6713
             VSRE QG
Sbjct  262   VSREGQG  268


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1839  FIVTR  1825
             FIVTR
Sbjct  153   FIVTR  157


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1660  REGQG  1674
             REGQG
Sbjct  264   REGQG  268


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  19  RSEPGSSL  42
           R EPG  L
Sbjct  13  RGEPGTAL  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9104  RSEPGSSL  9127
             R EPG  L
Sbjct  13    RGEPGTAL  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8443  LETWKNMEQS  8472
             LE W N E S
Sbjct  171   LEAWENGERS  180


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5435  LLVPIA  5452
             LLVP A
Sbjct  20    LLVPLA  25


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8272  LYYFY  8258
             LYY Y
Sbjct  160   LYYLY  164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 8/18 (44%)
 Frame = -2

Query  3255  GVFPH-----ITMLSVVI  3217
             GVF H     I  LSV+I
Sbjct  295   GVF-HLHQGDI--LSVII  309


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -2

Query  654  LPLSCLKLPWCLL---SL  610
            L L CL L   LL   SL
Sbjct  30   LALACLGL---LLAVVSL  44


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 8/19 (42%)
 Frame = -1

Query  7453  RLNS--PQQIVLLLHYTRQ  7403
             R NS  P      L Y RQ
Sbjct  137   RINSSSP------LRYNRQ  149


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6211  DNGER  6225
             +NGER
Sbjct  175   ENGER  179


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8391  RERMRRA  8411
             R R RRA
Sbjct  179   RSRKRRA  185


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6498  AQYNVH  6515
             A+Y VH
Sbjct  109   AHYEVH  114


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  485  QARIN  471
            +ARIN
Sbjct  135  EARIN  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8649  SQRR  8660
             SQRR
Sbjct  6     SQRR  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  12    RRGEP  16


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3617  AQPDQSESEL  3646
             A+ DQ  SEL
Sbjct  62    AEEDQDPSEL  71


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5098  RIDGTSP  5118
             RI+  SP
Sbjct  137   RINSSSP  143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1051  LLVP  1062
             LLVP
Sbjct  20    LLVP  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1143  LNKIVR  1160
             LN  VR
Sbjct  85    LNRLVR  90


>ref|NP_001035196.1|  voltage-gated hydrogen channel 1 [Homo sapiens]
 ref|NP_115745.2|  voltage-gated hydrogen channel 1 [Homo sapiens]
 sp|Q96D96.1|HVCN1_HUMAN  RecName: Full=Voltage-gated hydrogen channel 1; AltName: Full=Hydrogen 
voltage-gated channel 1; Short=HV1; AltName: Full=Voltage 
sensor domain-only protein
Length=273

 GENE ID: 84329 HVCN1 | hydrogen voltage-gated channel 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect(2) =   149
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = -2

Query  8313  LILLGMWRIA  8284
             LILL +WR+A
Sbjct  201   LILLRLWRVA  210


 Score = 17.6 bits (34),  Expect(2) =   149
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 9/21 (42%)
 Frame = -1

Query  8374  ITLLF-DHLPPIL*QNPFQAL  8315
             I LLF +H      Q  F+AL
Sbjct  186   IVLLFQEH------Q--FEAL  198


 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -2

Query  9171  RQALLRLKQ  9145
             RQ LLRLKQ
Sbjct  226   RQ-LLRLKQ  233


 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -3

Query  86   RQALLRLKQ  60
            RQ LLRLKQ
Sbjct  226  RQ-LLRLKQ  233


 Score = 19.3 bits (38),  Expect(2) =  5241
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -3

Query  752  LDVLHYRVILADLI  711
            LD L    +LA+LI
Sbjct  111  LDAL---LVLAELI  121


 Score = 16.3 bits (31),  Expect(2) =  5241
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  771  PDVPFAPG  748
            PDV  APG
Sbjct  72   PDVAPAPG  79


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 13/29 (44%)
 Frame = -3

Query  3251  SFPIL---LCFLWLF----F-ALPLLIVL  3189
             SF IL   L    LF    F AL LLI L
Sbjct  181   SF-ILDIVL----LFQEHQFEALGLLILL  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6846  IVLLF  6832
             IVLLF
Sbjct  186   IVLLF  190


 Score = 16.8 bits (32),  Expect(2) = 18206
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8063  LFSYHR  8080
             LFS HR
Sbjct  95    LFSSHR  100


 Score = 16.3 bits (31),  Expect(2) = 18206
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +1

Query  7927  PPPNP----EG  7947
             PPP P    EG
Sbjct  57    PPPTPVSGEEG  67


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4496  ALLVL  4482
             ALLVL
Sbjct  113   ALLVL  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5922  VVVASF  5905
             VVV SF
Sbjct  177   VVVVSF  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4335  LLKLW  4321
             LL LW
Sbjct  203   LLRLW  207


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  1095  PPIPV-GE  1115
             PP PV GE
Sbjct  58    PPTPVSGE  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP P P P
Sbjct  75    APAPGPAP  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5354  NAYSAM  5337
             N Y AM
Sbjct  132   NNYAAM  137


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  181  VAPEQGP  201
            VAP  GP
Sbjct  74   VAPAPGP  80


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LA+L+L
Sbjct  117   LAELIL  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4744  ELIL  4733
             ELIL
Sbjct  119   ELIL  122


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6827  IVLL  6816
             IVLL
Sbjct  186   IVLL  189


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  2207  CTEMEKE  2227
             C E E E
Sbjct  249   CSEKEQE  255


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5701  KILRQ  5715
             K LRQ
Sbjct  261   KLLRQ  265


>gb|AAL90442.1|  APRIL [Homo sapiens]
Length=250

 GENE ID: 8741 TNFSF13 | tumor necrosis factor (ligand) superfamily, member 13
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.8 bits (44),  Expect(2) =   151
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 8/23 (34%)
 Frame = +1

Query  6535  INSTA--------VKWQSSRRRG  6579
             IN T         V WQ   RRG
Sbjct  123   INATSKDDSDVTEVMWQPALRRG  145


 Score = 20.2 bits (40),  Expect(2) =   151
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6693  VSREDQG  6713
             VSRE QG
Sbjct  182   VSREGQG  188


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  3500  LTDTTNQKTELQ  3535
             LT    Q TELQ
Sbjct  49    LT----QQTELQ  56


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1660  REGQG  1674
             REGQG
Sbjct  184   REGQG  188


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8443  LETWKNMEQS  8472
             LE W N E S
Sbjct  91    LEAWENGERS  100


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 8/18 (44%)
 Frame = -2

Query  3255  GVFPH-----ITMLSVVI  3217
             GVF H     I  LSV+I
Sbjct  215   GVF-HLHQGDI--LSVII  229


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6211  DNGER  6225
             +NGER
Sbjct  95    ENGER  99


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8391  RERMRRA  8411
             R R RRA
Sbjct  99    RSRKRRA  105


>pdb|3HI5|L  Chain L, Crystal Structure Of Fab Fragment Of Al-57
Length=212


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect(2) =   155
 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 13/34 (38%)
 Frame = +2

Query  7007  TITLPCRIKQII----NMW--QKVGKA----MYA  7078
             TIT  CR  Q I    N W  QK GKA     YA
Sbjct  21    TIT--CRASQSIGSYLN-WYQQKTGKAPKALIYA  51


 Score = 18.0 bits (35),  Expect(2) =   155
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  6     TQSPS  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  3393  GSFSNWYH  3370
             GS+ NWY+
Sbjct  31    GSYLNWYQ  38


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWY Q
Sbjct  35    NWYQQ  39


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5877  SQSIMGYL  5900
             SQSI  YL
Sbjct  27    SQSIGSYL  34


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>pdb|3K6S|A  Chain A, Structure Of Integrin Alphaxbeta2 Ectodomain
 pdb|3K6S|C  Chain C, Structure Of Integrin Alphaxbeta2 Ectodomain
 pdb|3K6S|E  Chain E, Structure Of Integrin Alphaxbeta2 Ectodomain
 7 more sequence titles
 pdb|3K6S|G  Chain G, Structure Of Integrin Alphaxbeta2 Ectodomain
 pdb|3K71|A  Chain A, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K71|C  Chain C, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K71|E  Chain E, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K71|G  Chain G, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K72|A  Chain A, Structure Of Integrin Alphax Beta2
 pdb|3K72|C  Chain C, Structure Of Integrin Alphax Beta2
Length=1095


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -1

Query  6487  TWS--CSIERLI------ITF  6449
             TWS  C I  LI      ITF
Sbjct  839   TWSTSCRINHLIFRGGAQITF  859


 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 12/26 (46%)
 Frame = +3

Query  2766  NLHSFGWVMNSILINGQYSL*CCQKK  2843
             NL SFGWV   IL          QKK
Sbjct  1031  NL-SFGWVRQ-IL----------QKK  1044


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
 Frame = -2

Query  3480  PLLVTYPAFPNLVSLLAA  3427
             PLL    AF NL  +LAA
Sbjct  723   PLL----AFRNLRPMLAA  736


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  2384  DVVFLIE  2364
             D+VFLI+
Sbjct  132   DIVFLID  138


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  3071  IAEIQKQGQ  3097
             +AE QKQGQ
Sbjct  813   VAEGQKQGQ  821


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8053  EPVPLQLPP  8079
             EP+ LQ PP
Sbjct  58    EPIGLQVPP  66


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6016  LWVGV  6002
             LWVGV
Sbjct  600   LWVGV  604


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  2946  LRSLHNCLT  2920
             LRSLH  LT
Sbjct  822   LRSLH--LT  828


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 13/27 (48%)
 Frame = +3

Query  8127  DAGGGKPSNIGGISYSIGV------RN  8189
             DA G     I  I Y IGV      RN
Sbjct  258   DAAG-----I--IRYAIGVGLAFQNRN  277


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2314  ISRFQR  2331
             IS FQR
Sbjct  159   ISQFQR  164


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3113  DMSIGLAPAS  3084
             +MS GL  AS
Sbjct  70    NMSLGLSLAS  79


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  688  QQLTQD  705
            Q LTQD
Sbjct  573  QDLTQD  578


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3400  RSRNLL  3417
             RS NLL
Sbjct  642   RSKNLL  647


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2660  VGSDLE  2677
             VGS+LE
Sbjct  776   VGSNLE  781


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2381  HPAGL  2395
             HPAGL
Sbjct  804   HPAGL  808


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2912  LGKSDLPNSI  2883
             LG  DLP SI
Sbjct  941   LGQRDLPVSI  950


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +3

Query  7347  QEALW-----AQPQ  7373
             QEA W      +PQ
Sbjct  960   QEAVWMDVEVSHPQ  973


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7104  VHQILQ  7121
             V QILQ
Sbjct  1037  VRQILQ  1042


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1130  PSFINFS  1110
             P FIN S
Sbjct  369   PTFINMS  375


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7190  DMRD  7201
             DMRD
Sbjct  380   DMRD  383


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +3

Query  6351  QVVTPQSLHRPVQ  6389
             QVV  Q L   VQ
Sbjct  623   QVVSEQTL---VQ  632


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5946  LASDAQ  5929
             LA DAQ
Sbjct  734   LAADAQ  739


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6631  AEHIC  6645
             A+HIC
Sbjct  754   ADHIC  758


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8751  LTFGW  8765
             L FGW
Sbjct  1032  LSFGW  1036


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2182  KNKSISR  2202
             KN S SR
Sbjct  677   KNRSLSR  683


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1784  VSFNFP  1801
             +SF FP
Sbjct  764   ISFSFP  769


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1598  VSFLSTF  1578
             + FL TF
Sbjct  857   ITFLATF  863


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7919  FQTH  7930
             FQTH
Sbjct  178   FQTH  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6471  MEQDHVQM  6494
             M Q+ V M
Sbjct  374   MSQENVDM  381


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1417  LALW  1406
             LALW
Sbjct  392   LALW  395


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1172  YQHSG  1186
             YQH G
Sbjct  408   YQHTG  412


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4162  LLVGGN  4179
             LLVG N
Sbjct  774   LLVGSN  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6410  ELAQRIPLDR  6381
             +L QR P  R
Sbjct  114   QLTQRLPVSR  123


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6582  TTSSS  6568
             TTSSS
Sbjct  322   TTSSS  326


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  5218  PNPRKMSNSFI  5186
             PN   MS  FI
Sbjct  365   PN---MSPTFI  372


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2540  LPQGW  2554
             LP GW
Sbjct  478   LPRGW  482


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8168  LQYWSQEL  8191
             LQY  Q L
Sbjct  562   LQYFGQAL  569


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5862  QKNCG  5876
             +KNCG
Sbjct  749   EKNCG  753


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3456  FPNLVSLL  3433
             FP L SLL
Sbjct  768   FPGLKSLL  775


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5177  ELKNEAV  5197
             EL  EAV
Sbjct  957   ELNQEAV  963


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = -1

Query  4513  FTFPEE  4496
             FTF EE
Sbjct  182   FTF-EE  186


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 11/17 (64%), Gaps = 0/17 (0%)
 Frame = +2

Query  4394  DIQTKELQKQITKIQNF  4444
             DI  K  Q +I K+++F
Sbjct  284   DIASKPSQEHIFKVEDF  300


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7493  QLQARILAVE  7522
             QL   I A+E
Sbjct  309   QLKEKIFAIE  318


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7887  FTIESTAKT  7861
             F IE T  T
Sbjct  315   FAIEGTETT  323


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4039  NFCFYI  4022
             N C YI
Sbjct  634   NICLYI  639


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  138  RSLRP  152
            R LRP
Sbjct  728  RNLRP  732


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8625  GGLEGL  8642
             GGLE L
Sbjct  1087  GGLENL  1092


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7040  INMWQ  7054
             INM Q
Sbjct  372   INMSQ  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  8137  VGSPQILVES  8166
             V S Q LV+S
Sbjct  624   VVSEQTLVQS  633


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8442  SRDLE  8456
             SRDL+
Sbjct  649   SRDLQ  653


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5884  LLWGTCVEGS  5913
             LL   CVE S
Sbjct  698   LLLPSCVEDS  707


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  207  AFRSL  193
            AFR L
Sbjct  726  AFRNL  730


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6274  GAERIC  6291
             GA+ IC
Sbjct  753   GADHIC  758


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4945  IAESEKQ  4925
             +AE +KQ
Sbjct  813   VAEGQKQ  819


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2427  WVMHIFQ  2447
             WV +I Q
Sbjct  1036  WVRQILQ  1042


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  5136  CGPWSSGAC  5110
             CG  S GAC
Sbjct  50    CG-YSTGAC  57


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8671  LICGSTTH  8694
             L CG T H
Sbjct  87    LACGPTVH  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8148  RASHPL  8131
             R S PL
Sbjct  189   RSSNPL  194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4755  IPLGDA  4772
             IP+ DA
Sbjct  254   IPMADA  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  6788  NTLKQIASKLRE  6823
             + LK I   L E
Sbjct  301   DALKDIQNQLKE  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5352  VTRQRR  5369
             V RQ R
Sbjct  420   VSRQWR  425


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3259  FRSLSP  3242
             FR L P
Sbjct  727   FRNLRP  732


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7678  VNFSVP  7661
             +NF VP
Sbjct  950   INFWVP  955


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1297  KVSVI  1283
             KVSV+
Sbjct  1044  KVSVV  1048


>pdb|1G84|A  Chain A, The Solution Structure Of The C Epsilon2 Domain From 
Ige
Length=105


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             RTYTCQ
Sbjct  84    RTYTCQ  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 12/26 (46%)
 Frame = -1

Query  6973  TPSTIK------------PSTIKQLC  6932
             TP T+K            P TI  LC
Sbjct  5     TPPTVKILQSSSDGGGHFPPTIQLLC  30


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  132  YQSHT  118
            YQ HT
Sbjct  92   YQGHT  96


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3350  TPPLVK  3367
             TPP VK
Sbjct  5     TPPTVK  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6913  FPSTI  6899
             FP TI
Sbjct  22    FPPTI  26


>ref|NP_001153891.1|  Z-DNA-binding protein 1 isoform d [Homo sapiens]
Length=248

 GENE ID: 81030 ZBP1 | Z-DNA binding protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEWTLE  5167
             M QAP D G  RE H    LE
Sbjct  1     MAQAPADPG--REGH----LE  15


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +1

Query  9004  QGGVAWAGLGSGEPSDP  9054
             QGG     LG GEP DP
Sbjct  231   QGG----DLG-GEPPDP  242


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1269  PVKLARL  1249
             PVKLA L
Sbjct  28    PVKLAQL  34


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4235  MNKELK  4252
             M KELK
Sbjct  52    MKKELK  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6687  ESVSRED  6707
             + VSRED
Sbjct  217   QTVSRED  223


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  8998  SPAESPL*QARCQQ  8957
             SPAE P      QQ
Sbjct  85    SPAERP------QQ  92


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5752  RAEDSG  5769
             R EDSG
Sbjct  166   RPEDSG  171


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7523  RYLKD  7537
             R+LKD
Sbjct  115   RFLKD  119


 Score = 16.3 bits (31),  Expect(2) = 40717
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LLD  EQ
Sbjct  152   LLDMDEQ  158


 Score = 15.1 bits (28),  Expect(2) = 40717
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5363  EESKKW  5380
             E+SK W
Sbjct  157   EQSKAW  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 8/24 (33%)
 Frame = -1

Query  7486  APDCELQQMLLR--------LNSP  7439
             AP  EL Q L R        L SP
Sbjct  40    APKRELNQVLYRMKKELKVSLTSP  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  3147  VFRFL--NG  3127
             ++RFL  NG
Sbjct  113   IYRFLKDNG  121


 Score = 15.5 bits (29),  Expect(2) = 58648
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1419  VLAEAMSQV  1445
             VL EA S V
Sbjct  21    VLTEAGSPV  29


 Score = 15.1 bits (28),  Expect(2) = 58648
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  1531  GTQPEIAGP  1557
             GT PE  GP
Sbjct  70    GTDPEGEGP  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7195  EGQLE  7209
             EG+LE
Sbjct  11    EGHLE  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2716  LSQLLY  2699
             L Q LY
Sbjct  45    LNQVLY  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7386  YRPDN  7400
             YRP++
Sbjct  165   YRPED  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8428  GWEQHLE  8448
             G E HLE
Sbjct  9     GREGHLE  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +1

Query  1546  IAGPLGKRAVGNVER  1590
             IA  LG R   +V R
Sbjct  128   IAQALGMRTAKDVNR  142


>ref|NP_001153889.1|  Z-DNA-binding protein 1 isoform b [Homo sapiens]
Length=428

 GENE ID: 81030 ZBP1 | Z-DNA binding protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEWTLE  5167
             M QAP D G  RE H    LE
Sbjct  1     MAQAPADPG--REGH----LE  15


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 9/25 (36%)
 Frame = -1

Query  5842  HPKE---HGAPS------PPPSPQV  5795
             H  E   HG PS      PP SP V
Sbjct  267   HSNEMRLHGVPSEGPAHIPPGSPPV  291


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1269  PVKLARL  1249
             PVKLA L
Sbjct  28    PVKLAQL  34


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4235  MNKELK  4252
             M KELK
Sbjct  52    MKKELK  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6687  ESVSRED  6707
             + VSRED
Sbjct  216   QTVSRED  222


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  8998  SPAESPL*QARCQQ  8957
             SPAE P      QQ
Sbjct  85    SPAERP------QQ  92


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7386  YRPD  7397
             YRPD
Sbjct  165   YRPD  168


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2294  DSTKWRKLVD  2323
             DS  W  LVD
Sbjct  237   DSSTWGTLVD  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = -1

Query  1405  PGPPTP*HAVIISSSVAAGPNA  1340
             PG P P   V   S  AAGP A
Sbjct  286   PGSP-P---V---SATAAGPEA  300


 Score = 16.3 bits (31),  Expect(2) = 32498
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LLD  EQ
Sbjct  152   LLDMDEQ  158


 Score = 15.1 bits (28),  Expect(2) = 32498
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5363  EESKKW  5380
             E+SK W
Sbjct  157   EQSKAW  162


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7523  RYLKD  7537
             R+LKD
Sbjct  115   RFLKD  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6507  NVHME  6521
             ++HME
Sbjct  252   DIHME  256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 8/24 (33%)
 Frame = -1

Query  7486  APDCELQQMLLR--------LNSP  7439
             AP  EL Q L R        L SP
Sbjct  40    APKRELNQVLYRMKKELKVSLTSP  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  3147  VFRFL--NG  3127
             ++RFL  NG
Sbjct  113   IYRFLKDNG  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6962  STWST  6976
             STW T
Sbjct  239   STWGT  243


 Score = 15.5 bits (29),  Expect(2) = 46277
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1419  VLAEAMSQV  1445
             VL EA S V
Sbjct  21    VLTEAGSPV  29


 Score = 15.1 bits (28),  Expect(2) = 46277
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  1531  GTQPEIAGP  1557
             GT PE  GP
Sbjct  70    GTDPEGEGP  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7195  EGQLE  7209
             EG+LE
Sbjct  11    EGHLE  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2716  LSQLLY  2699
             L Q LY
Sbjct  45    LNQVLY  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4607  HLPS  4596
             HLPS
Sbjct  229   HLPS  232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8428  GWEQHLE  8448
             G E HLE
Sbjct  9     GREGHLE  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +1

Query  1546  IAGPLGKRAVGNVER  1590
             IA  LG R   +V R
Sbjct  128   IAQALGMRTAKDVNR  142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  284  AAPRLLP  264
            A PR LP
Sbjct  225  AGPRHLP  231


>sp|Q13936.3|CAC1C_HUMAN  RecName: Full=Voltage-dependent L-type calcium channel subunit 
alpha-1C; AltName: Full=Voltage-gated calcium channel subunit 
alpha Cav1.2; AltName: Full=Calcium channel, L type, alpha-1 
polypeptide, isoform 1, cardiac muscle
Length=2221

 GENE ID: 775 CACNA1C | calcium channel, voltage-dependent, L type, alpha 1C
subunit [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 11/24 (45%)
 Frame = +3

Query  1278  NWMTETLLVQN-ANPDCKTILKAL  1346
             NW+TE   VQ+ AN       KAL
Sbjct  550   NWLTE---VQDTAN-------KAL  563


 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 7/20 (35%)
 Frame = -3

Query  3227  LWLF---F-ALP---LLIVL  3189
             LW F   F ALP   LLIV+
Sbjct  1398  LWTFIKSFQALPYVALLIVM  1417


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  5549  LIRTVRLIKLL  5581
             L R  RL+KLL
Sbjct  1378  LFRVMRLVKLL  1388


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -2

Query  6849  IIVLL--FPNC  6823
             II+LL  F NC
Sbjct  128   IIILLTIFANC  138


 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 5/21 (23%)
 Frame = +1

Query  8143  SP---QILVESPTVLESGTKE  8196
             SP   Q LVE P V ES  KE
Sbjct  783   SPEKKQELVEKPAVGES--KE  801


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1185  DIRQGPK  1205
             DIRQ PK
Sbjct  1961  DIRQSPK  1967


 Score = 22.3 bits (45),  Expect =   731
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 15/36 (41%)
 Frame = +3

Query  222   RSSLDAGLGLLKRA--------RQEARGGDW*VRQK  305
             RS   A LG   RA        RQ  RGGD  + QK
Sbjct  1972  RS---ASLG--RRASFHLECLKRQKDRGGD--ISQK  2000


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6267  LMLVLIL  6247
             LM VLIL
Sbjct  1244  LMFVLIL  1250


 Score = 18.9 bits (37),  Expect(2) =   987
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6872  PLLRIA*RLL  6843
             PLL IA  LL
Sbjct  267   PLLHIA--LL  274


 Score = 18.9 bits (37),  Expect(2) =   987
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6789  LFHFALLML  6763
             L H ALL L
Sbjct  268   LLHIALLVL  276


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4921  LTVFQTL  4941
             LTVFQ L
Sbjct  697   LTVFQIL  703


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = -3

Query  974   IPF---CSFLIDGLF  939
             I F   C FLI  LF
Sbjct  1505  ISFYMLCAFLIINLF  1519


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  7833  IIMNNFIY  7810
             +IM+NF Y
Sbjct  1522  VIMDNFDY  1529


 Score = 20.6 bits (41),  Expect(2) =  1498
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = +2

Query  1436  EPS----NKFSYHNDAERQ  1480
             EPS       SY++D  RQ
Sbjct  1933  EPSLLSTEMLSYQDDENRQ  1951


 Score = 16.3 bits (31),  Expect(2) =  1498
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1296  LLVQNANP  1319
             LL   ANP
Sbjct  1889  LLLRKANP  1896


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 4/16 (25%)
 Frame = +2

Query  6977  EGSNNTEGSDTITLPC  7024
             E SN TEG +T   PC
Sbjct  1484  EPSNSTEG-ET---PC  1495


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  6836  YFQIVLLIC  6810
             YF I+L IC
Sbjct  732   YF-IILFIC  739


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8837  TPCEPAWDG  8863
             T C P WDG
Sbjct  330   TVCKPGWDG  338


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4294  LKMFSL  4277
             LKM+SL
Sbjct  573   LKMYSL  578


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5187  MKLLD  5201
             MKLLD
Sbjct  1646  MKLLD  1650


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  1115  FS-YWDRW  1095
             FS YW RW
Sbjct  502   FSRYWRRW  509


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3823  VIFLMF  3806
             VIFL F
Sbjct  530   VIFLVF  535


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 14/27 (51%)
 Frame = -1

Query  8299  YVANSSTSSLYYF-Y--------NPIC  8246
             YV NS      YF Y        N IC
Sbjct  1234  YVVNST-----YFEYLMFVLILLNTIC  1255


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4752  VLLNLFL  4732
             +LLN FL
Sbjct  743   ILLNVFL  749


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  6845  LFYYFQIV  6822
             LFY F IV
Sbjct  933   LFY-FDIV  939


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7893  TLFTIE  7876
             T FTIE
Sbjct  942   TIFTIE  947


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3817  FLMFIL  3800
             +LMF+L
Sbjct  1243  YLMFVL  1248


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 11/24 (45%)
 Frame = -3

Query  7112  LMNI*FVH*WEGHTLLFLLSATCL  7041
             LM   FV        L LL   CL
Sbjct  1244  LM---FV--------LILLNTICL  1256


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 10/32 (31%)
 Frame = -3

Query  8816  FIGLFY--LIWLNWY*LVA--PSKGQWISDPW  8733
             F GLF   +I L    L+A  P KG   SDPW
Sbjct  1278  FTGLFTVEMI-LK---LIAFKP-KG-YFSDPW  1303


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8326  FQALSY  8309
             FQAL Y
Sbjct  1405  FQALPY  1410


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 3/12 (25%)
 Frame = +3

Query  7005  TQSPSHAE*NKL  7040
             T+SPSH E  KL
Sbjct  1788  TESPSH-E--KL  1796


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2132  KPGMDGPK  2155
             KPG DGPK
Sbjct  333   KPGWDGPK  340


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3038  VLVLLESLC  3012
             VL+LL   C
Sbjct  1247  VLILLNTIC  1255


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5071  LCLVLRN  5091
             LCL L N
Sbjct  105   LCLTLKN  111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -2

Query  504  SLL-MF--LTGQD  475
            SLL  F  LTG+D
Sbjct  695  SLLTVFQILTGED  707


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6472  WNRTMY  6489
             WN  MY
Sbjct  708   WNSVMY  713


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4727  SSKNKFR  4747
             SS N FR
Sbjct  884   SSNNRFR  890


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5466  TLFTIAI  5446
             T FTI I
Sbjct  942   TIFTIEI  948


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4493  KLLWKGEG  4516
             KLL  GEG
Sbjct  1386  KLLSRGEG  1393


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5548  LFVAV  5534
             LFVAV
Sbjct  1518  LFVAV  1522


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 9/33 (27%)
 Frame = +2

Query  1778  GTVSFNFPQVTLWQRPLV-T---IKIGGQLKEA  1864
             GTV FN    TL    LV T   IK  G L +A
Sbjct  1602  GTVMFN---ATLF--ALVRTALRIKTEGNLEQA  1629


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  1751  PSEAGA-DRQ  1777
             PS+AGA  RQ
Sbjct  2102  PSQAGAPGRQ  2111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6672  TIQEKES  6692
             TI+E ES
Sbjct  2153  TIEEMES  2159


 Score = 16.3 bits (31),  Expect(2) = 11485
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8946  TPDAAL  8929
             TP AAL
Sbjct  45    TPGAAL  50


 Score = 15.9 bits (30),  Expect(2) = 11485
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9024  RPGHASL  9004
             RP HA +
Sbjct  24    RPAHANM  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  776  YGLMYH  759
            YGL++H
Sbjct  181  YGLLFH  186


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = -2

Query  2310  LHLVLSFFFMANTGVLYG-FS  2251
             L LVL        GVL G FS
Sbjct  397   LNLVL--------GVLSGEFS  409


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -1

Query  5224  M-EPNPRKMS  5198
             M E  PR MS
Sbjct  456   MDEEKPRNMS  465


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +3

Query  1737  ETTTPPQKQEPIDKE  1781
             E  T  QK+E  +KE
Sbjct  760   ESLTSAQKEEEEEKE  774


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8653  KEDKISL  8673
             KE+KI L
Sbjct  800   KEEKIEL  806


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  9064  QLLFACTG  9087
             Q +FAC G
Sbjct  1060  QFMFACIG  1067


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7945  PRGWE  7931
             PR WE
Sbjct  1108  PRSWE  1112


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2429  PHPVLLL  2409
             P+ VLLL
Sbjct  1451  PQAVLLL  1457


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  1063  RV----LVVPAMSLPLGS  1022
             RV    LV   M +PL S
Sbjct  1585  RVACKRLV--SMNMPLNS  1600


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  4515  PSPFQRSFAGP  4483
             P  F R FA P
Sbjct  2028  PASFPRPFATP  2038


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2353  VLSSLIK  2333
             VL S IK
Sbjct  257   VLNSIIK  263


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -2

Query  3279  FCMGSLNLGVFPHITM  3232
             F M    L VF  ITM
Sbjct  351   FAM----LTVFQCITM  362


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +3

Query  6666  PTTIQEKESVSRED  6707
             PT   E ESV  E+
Sbjct  467   PTS--ETESVNTEN  478


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4045  WNNFC  4031
             WN FC
Sbjct  509   WNRFC  513


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  4272  LTCPIIFFNSLFI  4234
             L C  I+F  LFI
Sbjct  728   LVC--IYFIILFI  738


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 8/21 (38%)
 Frame = -3

Query  7766  IYLIPI-------ILVHSFLA  7725
             IY I I       IL   FLA
Sbjct  731   IYFI-ILFICGNYILLNVFLA  750


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5193  LLDIFL  5210
             LL++FL
Sbjct  744   LLNVFL  749


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  5193  LLDIFLGF  5216
             +++IF GF
Sbjct  1177  MMNIFVGF  1184


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1254  EQASQEVKN  1280
             EQ  QE KN
Sbjct  1191  EQGEQEYKN  1199


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -1

Query  2002  STDFYEYL---IIL  1970
             ST ++EYL    IL
Sbjct  1238  ST-YFEYLMFVLIL  1250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6601  EIDRSN  6584
             EI+R N
Sbjct  1440  EINRNN  1445


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -1

Query  6982  PFSTPSTIKPST  6947
             PF TP    P T
Sbjct  2034  PFATP----PAT  2041


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9152  LSSGFPS  9132
             L S FPS
Sbjct  2066  LNSSFPS  2072


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  67    LSSGFPS  47
             L S FPS
Sbjct  2066  LNSSFPS  2072


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7436  ANCSAAALY  7410
             ANC A A Y
Sbjct  136   ANCVALAIY  144


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7074  YIAFP  7060
             YI FP
Sbjct  144   YIPFP  148


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = +2

Query  3653  QIIEQLIKKEKVYLAWV  3703
             Q  E L    K YL W+
Sbjct  429   QLEEDL----KGYLDWI  441


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5339  MSTPNSE  5319
             MS P SE
Sbjct  464   MSMPTSE  470


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4557  QEEKQR  4574
             +EEK+R
Sbjct  770   EEEKER  775


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6719  FVTIGKIGN  6745
             FV I  IGN
Sbjct  1043  FVAIRTIGN  1051


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1192  DKDQR  1206
             DK+QR
Sbjct  1203  DKNQR  1207


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8102  VTRIVELLGR  8131
             V R V LL R
Sbjct  1381  VMRLVKLLSR  1390


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  870   LLLIML  853
             LL +ML
Sbjct  1413  LLIVML  1418


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2946  LRSLHN  2929
             LR LH+
Sbjct  1703  LRTLHD  1708


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1385  SGSRRTRP  1408
             S  RR RP
Sbjct  2089  SAARRVRP  2096


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1359  TLEEM  1373
             T EEM
Sbjct  2153  TIEEM  2157


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  602  SKDRDK  619
            SK+R+K
Sbjct  409  SKEREK  414


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4296  VLRC  4285
             VLRC
Sbjct  618   VLRC  621


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2125  YWYSL  2111
             YW SL
Sbjct  633   YWNSL  637


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2151  GPSIPG  2134
             GPS PG
Sbjct  721   GPSFPG  726


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3449  LGKAGYV  3469
             LG A YV
Sbjct  953   LGNADYV  959


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4034  EVIPAE  4051
             EV PAE
Sbjct  1350  EVNPAE  1355


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6846  IVLLF  6832
             IV+LF
Sbjct  1415  IVMLF  1419


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  537   LQTGSEELR  563
             L+   EELR
Sbjct  1626  LEQANEELR  1634


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5241  SMKLM  5255
             SMKL+
Sbjct  1645  SMKLL  1649


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  970   HSAASSL  950
             H  ASSL
Sbjct  2113  HGSASSL  2119


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2565  QQYSK  2579
             QQY K
Sbjct  84    QQYGK  88


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1542  RNCRA  1556
             R CRA
Sbjct  515   RKCRA  519


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2462  LHLRE  2448
             LHL E
Sbjct  865   LHLKE  869


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  4724  AFIVMSI  4704
             AF  M I
Sbjct  1174  AFFMMNI  1180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2487  VNAVYF  2470
             VN  YF
Sbjct  1236  VNSTYF  1241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5716  FVLI  5705
             FVLI
Sbjct  1246  FVLI  1249


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6545  VELIL  6531
             VE+IL
Sbjct  1284  VEMIL  1288


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8697  GYFPD  8711
             GYF D
Sbjct  1297  GYFSD  1301


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6288  MHFFI  6302
             M FFI
Sbjct  1417  MLFFI  1421


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3193  FYIIS  3179
             FY IS
Sbjct  1502  FYFIS  1506


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7418  QQQNNLLRAI  7447
             +Q N  LRAI
Sbjct  1627  EQANEELRAI  1636


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3771  TFLI  3760
             TFLI
Sbjct  1669  TFLI  1672


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5539  AVSASS  5522
             AVSA S
Sbjct  1734  AVSAAS  1739


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  165   WKISS  179
             WK SS
Sbjct  1857  WKLSS  1861


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8282  RAIRHIPRR  8308
             R IR+ P R
Sbjct  1960  RDIRQSPKR  1968


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -2

Query  7884  TIE---STAKTIL  7855
             TIE   S A  IL
Sbjct  2153  TIEEMESAADNIL  2165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8151  LRASHPLRP  8125
             LRA   LRP
Sbjct  236   LRAFRVLRP  244


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  8009  RLVNG--SL  8029
             RLV G  SL
Sbjct  246   RLVSGVPSL  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2787  VMNSI  2801
             V+NSI
Sbjct  257   VLNSI  261


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6407  LAQRI  6393
             LA+RI
Sbjct  493   LAHRI  497


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7633  LFQRF  7619
             LF RF
Sbjct  587   LFNRF  591


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6803  SVLKC  6789
             SVL C
Sbjct  617   SVLRC  621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2417  LLLIFSF  2397
             LLL F F
Sbjct  655   LLLLFLF  661


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             LL LFL
Sbjct  655   LLLLFL  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  143  PQTLL  157
            PQ LL
Sbjct  693  PQSLL  697


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4051  FCWNNF  4034
             FC N F
Sbjct  984   FCRNYF  989


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7156  VAITTI  7139
             VAI TI
Sbjct  1044  VAIRTI  1049


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6378  RPVQRY  6395
             RP  RY
Sbjct  1217  RPLRRY  1222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5074  CLVLR  5088
             CL LR
Sbjct  1888  CLLLR  1892


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8862  PSHAGSQG  8839
             PS+AG  G
Sbjct  2102  PSQAGAPG  2109


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6668  NNNTR  6682
             N NTR
Sbjct  3     NENTR  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3706  STQR  3717
             STQR
Sbjct  78    STQR  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6143  LCVSLK  6160
             LC  LK
Sbjct  105   LCLTLK  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = -2

Query  1098  VDYLSSILFVPEGY**FL  1045
             V+YL  I F  E    FL
Sbjct  162   VEYLFLIIFTVEA---FL  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  796  AFKVL  782
            AF VL
Sbjct  238  AFRVL  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3754  CWNQE  3768
             C NQE
Sbjct  298   CYNQE  302


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7650  PGWSG  7664
             PGW G
Sbjct  334   PGWDG  338


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  390  FFPIDLIL  367
            FF  +L+L
Sbjct  394  FFVLNLVL  401


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4560  EEKQRSL  4580
             EEK R +
Sbjct  458   EEKPRNM  464


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4730  SKNKF  4744
             SK KF
Sbjct  498   SKSKF  502


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1290  ETLLVQ  1307
             ET LV+
Sbjct  602   ETILVE  607


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5310  LSIFRI  5327
             L IF I
Sbjct  625   LRIFKI  630


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  942  ETINEEAAE  968
            ET  EE  E
Sbjct  841  ETTGEEDEE  849


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1627  ACLSVQSF  1604
             AC  VQ F
Sbjct  1064  ACIGVQLF  1071


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8386  VGHPI  8372
             V HPI
Sbjct  1101  VDHPI  1105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4625  YLPHNHH  4605
             Y P N+H
Sbjct  1222  YIPKNQH  1228


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  864   LIMLKT  847
             LI+L T
Sbjct  1248  LILLNT  1253


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  381   IDLIL  367
             ID IL
Sbjct  1316  IDVIL  1320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4523  VIQDNSD  4543
             VI DN D
Sbjct  1522  VIMDNFD  1528


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5469  ATLF  5458
             ATLF
Sbjct  1608  ATLF  1611


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6235  FYLSFL  6218
             FY  FL
Sbjct  1666  FYATFL  1671


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1201  QRNPL  1215
             QRN L
Sbjct  1693  QRNAL  1697


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1837  KDRG  1848
             KDRG
Sbjct  1991  KDRG  1994


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  382   HRSNSP  365
             +RS SP
Sbjct  2023  QRSHSP  2028


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3732  SFPPI  3718
             SFP I
Sbjct  2069  SFPSI  2073


>pdb|2G2B|A  Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 
1
Length=150


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  4244  ELKKIIGQV  4270
             ELKK IG+V
Sbjct  88    ELKKLIGEV  96


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  398  KARGKEK  418
            KAR KEK
Sbjct  130  KAREKEK  136


 Score = 16.8 bits (32),  Expect(2) = 22561
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4400  QTKELQ  4417
             QT +LQ
Sbjct  6     QTRDLQ  11


 Score = 16.3 bits (31),  Expect(2) = 22561
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4447  GLLQGQQ  4467
             GLL  QQ
Sbjct  17    GLLKAQQ  23


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             L+E NK
Sbjct  27    LDEINK  32


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7854  KPTKPP  7837
             KPT PP
Sbjct  136   KPTGPP  141


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2061  FLPIML  2044
             FL  ML
Sbjct  109   FLRMML  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             PT PP
Sbjct  137   PTGPP  141


>ref|NP_072086.2|  matrix metalloproteinase-16 isoform 2 preproprotein [Homo sapiens]
Length=457

 GENE ID: 4325 MMP16 | matrix metallopeptidase 16 (membrane-inserted)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 18/30 (60%)
 Frame = +2

Query  2594  ILEPFRKQNPDIVIYQYM---------DDL  2656
             I+ PF         YQYM         DDL
Sbjct  263   IMAPF---------YQYMETDNFKLPNDDL  283


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  6844  NNL*AILRR  6870
             N L AILRR
Sbjct  348   NTL-AILRR  355


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7465  VATHSLGH  7488
             VA H LGH
Sbjct  243   VAVHELGH  250


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4174  RPPTG  4160
             RPPTG
Sbjct  327   RPPTG  331


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2816  LSIYQDG  2796
             LSI QDG
Sbjct  413   LSIIQDG  419


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3995  LVAVH  4009
             LVAVH
Sbjct  242   LVAVH  246


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1689  RPEPTAPP  1712
             RP PT PP
Sbjct  301   RPLPTVPP  308


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6900  IVEGNFST  6923
             I +GNF T
Sbjct  342   ICDGNFNT  349


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4854  RKKRY  4868
             R KRY
Sbjct  116   RRKRY  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7886  NRVRQGY  7906
             NRV  GY
Sbjct  371   NRVMDGY  377


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5071  GGFIFF  5054
             G F+FF
Sbjct  401   GNFVFF  406


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3283  NMGNMVDR  3306
             NM   VDR
Sbjct  83    NMTGKVDR  90


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7057  FLPHVY  7040
             FL H Y
Sbjct  205   FLAHAY  210


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7327  PWVLG  7341
             PW LG
Sbjct  227   PWTLG  231


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5383  PVDPRL  5400
             P DPR+
Sbjct  55    PTDPRM  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3979  RRKSY  3993
             RRK Y
Sbjct  116   RRKRY  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6663  DPTTI  6677
             DPT I
Sbjct  259   DPTAI  263


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9096  PERPSTG  9076
             P RP TG
Sbjct  325   PPRPPTG  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6456  IIRRSM  6473
             I RR M
Sbjct  352   ILRREM  357


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4665  VLLNFS  4648
             +LL FS
Sbjct  2     ILLTFS  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF L  LL
Sbjct  20    VFFLQTLL  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  1712  RRELQVW  1732
             RR   VW
Sbjct  153   RRAFDVW  159


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3602  LGIIQ  3616
             L IIQ
Sbjct  413   LSIIQ  417


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6413  WELAQR  6396
             W L QR
Sbjct  428   WILEQR  433


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8442  SRDLEKH  8462
             SR  EKH
Sbjct  440   SRQTEKH  446


>ref|NP_001129074.1|  beta-galactosidase isoform c preproprotein [Homo sapiens]
Length=546

 GENE ID: 2720 GLB1 | galactosidase, beta 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             LPL+LVL L
Sbjct  9     LPLLLVLLL  17


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  1767  PIDKELYPLT  1796
             PI K LYPLT
Sbjct  266   PI-KSLYPLT  274


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  1124  FI---NFSYWD  1101
             FI   NF YW+
Sbjct  177   FIGGTNFAYWN  187


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3209  LPLLIVL  3189
             LPLL VL
Sbjct  9     LPLLLVL  15


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = -1

Query  7675  NFSVPLHPGRVIPNL  7631
             NFS+P   G  IP+L
Sbjct  424   NFSIP--SG--IPDL  434


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8491  LPMLLV  8508
             LP+LLV
Sbjct  9     LPLLLV  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2840  KDSW  2851
             KDSW
Sbjct  539   KDSW  542


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1307  KCEP  1318
             KCEP
Sbjct  126   KCEP  129


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  853  ENMG  842
            ENMG
Sbjct  347  ENMG  350


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2811  HLSGW  2797
             HL GW
Sbjct  392   HLGGW  396


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7533  FRYLS  7519
             FRY S
Sbjct  48    FRYIS  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1290  LSSNFL  1273
             LSSN L
Sbjct  370   LSSNIL  375


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1077  LFVPE  1063
             LFVP+
Sbjct  470   LFVPQ  474


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2257  SIQYS  2271
             SI+YS
Sbjct  54    SIHYS  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -1

Query  5269  CPSIPI------SFI  5243
             CPS PI       FI
Sbjct  262   CPSGPIKSLYPLTFI  276


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1749  PPQK  1760
             PPQK
Sbjct  534   PPQK  537


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  468  RIVLAPCLPILYVL  427
            RI     LP L VL
Sbjct  7    RI-----LPLLLVL  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3077  LLLSLLM  3057
             LLL LL+
Sbjct  11    LLLVLLL  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3144  FRFLNGS  3124
             FR+  GS
Sbjct  48    FRYISGS  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1315  FAFW  1304
             FA+W
Sbjct  183   FAYW  186


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S YPL
Sbjct  269   SLYPL  273


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4029  SIYPL  4015
             S YPL
Sbjct  269   SLYPL  273


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7109  SNIT  7120
             SNIT
Sbjct  115   SNIT  118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  987   VHAGPIAP  1010
             V  GPI P
Sbjct  229   VPEGPIPP  236


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1955  FIKVRQ  1972
             FI V Q
Sbjct  275   FIQVKQ  280


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4124  NGSNFT  4141
             N SN+T
Sbjct  411   NSSNYT  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2902  DLPRD  2916
             DLP D
Sbjct  433   DLPQD  437


>gb|EAW57221.1|  immunity-related GTPase family, cinema, isoform CRA_a [Homo sapiens]
Length=500

 GENE ID: 56269 IRGC | immunity-related GTPase family, cinema [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  8927  PRAASGVLQELLTS  8968
             P AAS  LQELL S
Sbjct  74    PQAAS-HLQELLAS  86


 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1796  FPQVTLW  1816
             FP VTLW
Sbjct  141   FPDVTLW  147


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  3602  LGIIQAQP  3625
             LG+IQA P
Sbjct  311   LGVIQALP  318


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +3

Query  5802  GDGGGDGAP  5828
             G+GGG+ AP
Sbjct  466   GEGGGEEAP  474


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 38/66 (57%)
 Frame = +2

Query  8900  QPPSISSRGPRAASGVLQEL-------LTSSLLQGTFRWGLSREAWPGRDWGVASPQILH  9058
             Q PS    G R A  VLQE        L              REA      GVA P I  
Sbjct  217   QRPS----GFREAA-VLQEIRDHCAERL--------------REA------GVADPRI--  249

Query  9059  ISSCFL  9076
                 FL
Sbjct  250   ----FL  251


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  3462  PA---FPNLVS  3439
             PA   FP LVS
Sbjct  257   PARYDFPTLVS  267


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1480  ILGTKERL  1503
             IL  KERL
Sbjct  54    ILMAKERL  61


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 11/21 (52%)
 Frame = +3

Query  2097  PLA-------LLRLYQ*N*SQ  2138
             PLA        LRLY    SQ
Sbjct  370   PLANEVSPETVLRLY----SQ  386


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6393  YPLSQFP  6413
             YP  QFP
Sbjct  136   YPHPQFP  142


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7010  ITLPC  7024
             +TLPC
Sbjct  23    VTLPC  27


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2690  RTKIEE  2707
             RTK++E
Sbjct  204   RTKVDE  209


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  280  PLASCR  263
            PL  CR
Sbjct  474  PLSTCR  479


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8873  LRVIHP  8856
             LR+ HP
Sbjct  17    LRITHP  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  8883  TLLS------PGHPSHAG  8848
             TL S      P H  HAG
Sbjct  264   TLVSTWEHDLPSHRRHAG  281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1210  PLETM  1224
             PL TM
Sbjct  34    PLATM  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -2

Query  771  PDV-----PFA--PGCSA  739
            PDV     P A  PGC A
Sbjct  142  PDVTLWDLPGAGSPGCPA  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +1

Query  4708  DITM------KALIQE  4737
             DI +      KA+ QE
Sbjct  287   DISLEALQKKKAMLQE  302


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2730  GDLPH  2744
             GDLP+
Sbjct  71    GDLPQ  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +3

Query  4857  KKRY--STQVDPELA  4895
             KK Y   T VD +LA
Sbjct  198   KKFYFVRTKVDEDLA  212


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5120  EDQGPQRE  5143
             ED  PQ E
Sbjct  442   EDDEPQPE  449


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  26    PCPPP  30


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8879  SVRVEV  8896
             S+R EV
Sbjct  89    SIRLEV  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7430  NLLRAIEAQ  7456
             N LR  EA+
Sbjct  109   NALRGLEAE  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4386  IMSTILSPALYP  4351
             +M T + P  YP
Sbjct  126   VMETTMQPSPYP  137


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6695  YGFFFL  6678
             Y FF L
Sbjct  171   YDFFLL  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = +2

Query  4016  SGYIEAEVIPAETGQE  4063
             SG+ EA V      QE
Sbjct  220   SGFREAAVL-----QE  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9009  SLESPQRK  8986
             SLE  Q K
Sbjct  289   SLEALQKK  296


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8045  DLRS  8056
             DLRS
Sbjct  362   DLRS  365


>ref|NP_000395.2|  beta-galactosidase isoform a preproprotein [Homo sapiens]
Length=677

 GENE ID: 2720 GLB1 | galactosidase, beta 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             LPL+LVL L
Sbjct  9     LPLLLVLLL  17


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  1767  PIDKELYPLT  1796
             PI K LYPLT
Sbjct  397   PI-KSLYPLT  405


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  1124  FI---NFSYWD  1101
             FI   NF YW+
Sbjct  308   FIGGTNFAYWN  318


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3209  LPLLIVL  3189
             LPLL VL
Sbjct  9     LPLLLVL  15


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = -1

Query  7675  NFSVPLHPGRVIPNL  7631
             NFS+P   G  IP+L
Sbjct  555   NFSIP--SG--IPDL  565


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  7890  LFTIESTAKTILK  7852
             LFT +   KT LK
Sbjct  217   LFTTDGAHKTFLK  229


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = -1

Query  6268  SY-ACADIERAVFYLSFLH  6215
             SY AC D +    YL FL+
Sbjct  191   SYFAC-DFD----YLRFLQ  204


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8491  LPMLLV  8508
             LP+LLV
Sbjct  9     LPLLLV  14


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 5/22 (22%)
 Frame = +2

Query  3332  EWEFVNTPPLVKLWYQLEKEPI  3397
             EWE    P     W  LEKE I
Sbjct  129   EWEMGGLPA----W-LLEKESI  145


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2570  LLVIL  2556
             LLVIL
Sbjct  116   LLVIL  120


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  881  RFKHH  895
            RF HH
Sbjct  206  RFRHH  210


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2840  KDSW  2851
             KDSW
Sbjct  670   KDSW  673


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9008  EAWPG  9022
             E WPG
Sbjct  90    EPWPG  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8685  RSTDQGYL  8662
             RS D  YL
Sbjct  148   RSSDPDYL  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1307  KCEP  1318
             KCEP
Sbjct  257   KCEP  260


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  853  ENMG  842
            ENMG
Sbjct  478  ENMG  481


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2811  HLSGW  2797
             HL GW
Sbjct  523   HLGGW  527


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7533  FRYLS  7519
             FRY S
Sbjct  48    FRYIS  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  558  LRSLYNTV  581
            L  LY TV
Sbjct  233  LQGLYTTV  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1290  LSSNFL  1273
             LSSN L
Sbjct  501   LSSNIL  506


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1077  LFVPE  1063
             LFVP+
Sbjct  601   LFVPQ  605


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2257  SIQYS  2271
             SI+YS
Sbjct  54    SIHYS  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  4854  SILWRLPDPN  4825
             SIL R  DP+
Sbjct  144   SILLRSSDPD  153


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -1

Query  5269  CPSIPI------SFI  5243
             CPS PI       FI
Sbjct  393   CPSGPIKSLYPLTFI  407


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1749  PPQK  1760
             PPQK
Sbjct  665   PPQK  668


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  468  RIVLAPCLPILYVL  427
            RI     LP L VL
Sbjct  7    RI-----LPLLLVL  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3077  LLLSLLM  3057
             LLL LL+
Sbjct  11    LLLVLLL  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3144  FRFLNGS  3124
             FR+  GS
Sbjct  48    FRYISGS  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1315  FAFW  1304
             FA+W
Sbjct  314   FAYW  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S YPL
Sbjct  400   SLYPL  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4029  SIYPL  4015
             S YPL
Sbjct  400   SLYPL  404


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9046  SDPAY  9060
             SDP Y
Sbjct  150   SDPDY  154


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7109  SNIT  7120
             SNIT
Sbjct  246   SNIT  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  987   VHAGPIAP  1010
             V  GPI P
Sbjct  360   VPEGPIPP  367


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1955  FIKVRQ  1972
             FI V Q
Sbjct  406   FIQVKQ  411


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4124  NGSNFT  4141
             N SN+T
Sbjct  542   NSSNYT  547


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2902  DLPRD  2916
             DLP D
Sbjct  564   DLPQD  568


>gb|AAH33853.1|  IRGC protein [Homo sapiens]
Length=285

 GENE ID: 56269 IRGC | immunity-related GTPase family, cinema [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  8927  PRAASGVLQELLTS  8968
             P AAS  LQELL S
Sbjct  37    PQAAS-HLQELLAS  49


 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1796  FPQVTLW  1816
             FP VTLW
Sbjct  104   FPDVTLW  110


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  3602  LGIIQAQP  3625
             LG+IQA P
Sbjct  274   LGVIQALP  281


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 38/66 (57%)
 Frame = +2

Query  8900  QPPSISSRGPRAASGVLQEL-------LTSSLLQGTFRWGLSREAWPGRDWGVASPQILH  9058
             Q PS    G R A  VLQE        L              REA      GVA P I  
Sbjct  180   QRPS----GFREAA-VLQEIRDHCAERL--------------REA------GVADPRI--  212

Query  9059  ISSCFL  9076
                 FL
Sbjct  213   ----FL  214


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  3462  PA---FPNLVS  3439
             PA   FP LVS
Sbjct  220   PARYDFPTLVS  230


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1480  ILGTKERL  1503
             IL  KERL
Sbjct  17    ILMAKERL  24


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6393  YPLSQFP  6413
             YP  QFP
Sbjct  99    YPHPQFP  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6889  RYNF  6878
             RYNF
Sbjct  133   RYNF  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2690  RTKIEE  2707
             RTK++E
Sbjct  167   RTKVDE  172


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  8883  TLLS------PGHPSHAG  8848
             TL S      P H  HAG
Sbjct  227   TLVSTWEHDLPSHRRHAG  244


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -2

Query  771  PDV-----PFA--PGCSA  739
            PDV     P A  PGC A
Sbjct  105  PDVTLWDLPGAGSPGCPA  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +1

Query  4708  DITM------KALIQE  4737
             DI +      KA+ QE
Sbjct  250   DISLEALQKKKAMLQE  265


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2730  GDLPH  2744
             GDLP+
Sbjct  34    GDLPQ  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +3

Query  4857  KKRY--STQVDPELA  4895
             KK Y   T VD +LA
Sbjct  161   KKFYFVRTKVDEDLA  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8879  SVRVEV  8896
             S+R EV
Sbjct  52    SIRLEV  57


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7430  NLLRAIEAQ  7456
             N LR  EA+
Sbjct  72    NALRGLEAE  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4386  IMSTILSPALYP  4351
             +M T + P  YP
Sbjct  89    VMETTMQPSPYP  100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6695  YGFFFL  6678
             Y FF L
Sbjct  134   YNFFLL  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = +2

Query  4016  SGYIEAEVIPAETGQE  4063
             SG+ EA V      QE
Sbjct  183   SGFREAAVL-----QE  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9009  SLESPQRK  8986
             SLE  Q K
Sbjct  252   SLEALQKK  259


>ref|NP_002223.3|  potassium voltage-gated channel subfamily A member 3 [Homo sapiens]
Length=575

 GENE ID: 3738 KCNA3 | potassium voltage-gated channel, shaker-related
subfamily, member 3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 14/36 (38%)
 Frame = +2

Query  1634  FREDLAFLQGKAREFSSEQTRANSP-TRREL--QVW  1732
             FRED  FL    RE   E+ R   P  RR+   QVW
Sbjct  197   FREDEGFL----RE---EE-R---PLPRRDFQRQVW  221


 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = +3

Query  6144  SVLV*SALI*RMILIPIVV  6200
             SVLV        ILI IV+
Sbjct  240   SVLV--------ILISIVI  250


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3228  SVVIFC  3211
             S+VIFC
Sbjct  247   SIVIFC  252


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  2505  LFILGMV---NAVYF  2470
             LFI G +    AVYF
Sbjct  405   LFI-GVILFSSAVYF  418


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5065  FIFFGVI  5045
             F F GVI
Sbjct  404   FLFIGVI  410


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8640  ALPVP  8626
             ALPVP
Sbjct  473   ALPVP  477


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5099  LCQFRNT  5079
             LCQF  T
Sbjct  122   LCQFPET  128


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4646  MEKF  4657
             MEKF
Sbjct  194   MEKF  197


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2626  VWILF  2612
             VW LF
Sbjct  220   VWLLF  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1656  RKARS  1642
             RKARS
Sbjct  516   RKARS  520


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  9043  ARHSPVPP-RP  9014
             ARH   PP RP
Sbjct  16    ARHRAHPPQRP  26


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4784  YYQS  4773
             YYQS
Sbjct  162   YYQS  165


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1048  ELLVPF  1065
             ELLV F
Sbjct  309   ELLVRF  314


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  3820  IFLMFILGLI  3791
             IF +FI G I
Sbjct  402   IFFLFI-GVI  410


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  815  FYYFY  801
            F YFY
Sbjct  483  FNYFY  487


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6711  GEHLLQ  6728
             G+HLL+
Sbjct  58    GDHLLE  63


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5365  GEQEME  5382
             GE+ ME
Sbjct  190   GEEAME  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/28 (35%), Positives = 10/28 (35%), Gaps = 10/28 (35%)
 Frame = +1

Query  3985  KSYPGSSSCSQWIyrsrsyssrnrAGNS  4068
             K YP S S            S   AGNS
Sbjct  263   KDYPASTS----------QDSFEAAGNS  280


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/16 (37%), Positives = 6/16 (37%), Gaps = 7/16 (43%)
 Frame = -3

Query  3236  LCFLWL-------FFA  3210
             LC  W        FFA
Sbjct  301   LCIIWFSFELLVRFFA  316


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5187  MKLLDI  5204
             M L DI
Sbjct  328   MNLIDI  333


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4398  MSVAIMSTI  4372
             MS AI+  I
Sbjct  358   MSLAILRVI  366


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8434  PTLSAAG  8414
             P L AAG
Sbjct  91    PSLPAAG  97


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3894  VINVS  3908
             VIN+S
Sbjct  107   VINIS  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  174  SSSGARTG  197
            S SG R G
Sbjct  280  STSGSRAG  287


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4966  CPNKA  4952
             CP KA
Sbjct  317   CPSKA  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5815  PPPS  5804
             PPPS
Sbjct  12    PPPS  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4881  DPELAD  4898
             +PE AD
Sbjct  63    EPEVAD  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  7913  LSFQTHLPT  7939
             L F+T+L T
Sbjct  113   LRFETQLKT  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5974  NIMYL  5960
             NIM L
Sbjct  326   NIMNL  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1766  ADRQG  1780
             A+RQG
Sbjct  348   AERQG  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1617  ERQAN  1631
             ERQ N
Sbjct  349   ERQGN  353


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3567  NPESC  3553
             NP SC
Sbjct  561   NPNSC  565


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4278  RLNILR  4295
             RL  LR
Sbjct  4     RLSLLR  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4356  YPPIPPFL  4333
             Y P PP L
Sbjct  86    YEPLPPSL  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2362  FPEVL  2348
             FPE L
Sbjct  125   FPETL  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1869  NRASF  1855
             NR SF
Sbjct  152   NRPSF  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4497  SFAGPF  4480
             SF  PF
Sbjct  290   SFSDPF  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6022  YFLWVGV  6002
             +FL +GV
Sbjct  403   FFLFIGV  409


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6461  KTFNGTGPCT  6490
             KT N T  CT
Sbjct  548   KTGNSTATCT  557


>ref|NP_006010.2|  V-type proton ATPase 116 kDa subunit a isoform 3 isoform a [Homo 
sapiens]
 sp|Q13488.3|VPP3_HUMAN  RecName: Full=V-type proton ATPase 116 kDa subunit a isoform 
3; Short=V-ATPase 116 kDa isoform a3; AltName: Full=Vacuolar 
proton translocating ATPase 116 kDa subunit a isoform 3; AltName: 
Full=Osteoclastic proton pump 116 kDa subunit; Short=OC-116 
kDa; Short=OC116; AltName: Full=T-cell immune regulator 
1; AltName: Full=T-cell immune response cDNA7 protein; Short=TIRC7
 gb|AAH18133.1|  T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal 
V0 subunit A3 [Homo sapiens]
 gb|AAH32465.1|  T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal 
V0 subunit A3 [Homo sapiens]
 gb|EAW74691.1|  T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal 
V0 subunit A3, isoform CRA_c [Homo sapiens]
 gb|EAW74692.1|  T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal 
V0 subunit A3, isoform CRA_c [Homo sapiens]
Length=830

 GENE ID: 10312 TCIRG1 | T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/8 (75%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +2

Query  2315  LVDFRELN  2338
             LV+FR+LN
Sbjct  34    LVEFRDLN  41


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  5266  PSIPISFIDM  5237
             PSI I FI+M
Sbjct  604   PSILIHFINM  613


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5467  CFHCQV  5484
             CFHC+V
Sbjct  238   CFHCHV  243


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1494  RKIVKCFNC  1520
             RKI  CF C
Sbjct  233   RKITDCFHC  241


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  501  LLMFL  487
            LLMFL
Sbjct  411  LLMFL  415


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -3

Query  5108  PSILCQFRNTRQRWLYLF  5055
             PSIL +F N     ++LF
Sbjct  604   PSILIHFIN-----MFLF  616


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  6410  ELAQRIPLDRPV  6375
             EL Q  PL+ PV
Sbjct  200   ELEQ--PLEHPV  209


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
 Frame = +1

Query  8017  ERILGTYLGRSAEPVPLQ-LPP  8079
             ER L   LGR    V LQ LPP
Sbjct  275   ERFLSQVLGR----V-LQLLPP  291


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  7421  QQNNLLRAIEAQQHLLQL  7474
             QQ   LRA   Q H LQL
Sbjct  115   QQA--LRA---QLHQLQL  127


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8670  GYLVF  8656
             GYLVF
Sbjct  582   GYLVF  586


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = -3

Query  6029  PILLLVGWG----LWVHRH  5985
             PILLL   G    L  HRH
Sbjct  645   PILLL---GTPLHL-LHRH  659


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3536  AIYLAL  3553
             A+YLAL
Sbjct  301   AVYLAL  306


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1739  LYPRPE  1722
             LYPR E
Sbjct  625   LYPRQE  630


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4028  EAEVIPAE  4051
             EAE +P E
Sbjct  704   EAELVPSE  711


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  247  PSPASRELLWFPFRFQ  200
            P P  R+LL    R Q
Sbjct  87   PAPPPRDLL----RIQ  98


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8074  PPLERL  8091
             P LERL
Sbjct  180   PALERL  185


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -1

Query  8464  PCFSRSRDAAPTL  8426
             PC    RD  PTL
Sbjct  353   PC----RDMPPTL  361


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3989  VILVAVHVA  4015
             VIL  VH A
Sbjct  539   VILGVVHMA  547


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4512  SPFQRSF  4492
             S FQR F
Sbjct  45    SAFQRRF  51


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 35/62 (56%)
 Frame = +3

Query  5145  HTMNGH*SF*RSLRMKL-LD-----IFLG---FG-----SMA*GN-IS------MKLMGI  5261
             HTM             L LD     +FLG   FG     S+A  N  S      MK+  I
Sbjct  495   HTM-------------LTLDPNVTGVFLGPYPFGIDPIWSLA-ANHLSFLNSFKMKMSVI  540

Query  5262  LG  5267
             LG
Sbjct  541   LG  542


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7587  VVQMSF  7570
             VV+M F
Sbjct  543   VVHMAF  548


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7347  QEALWAQ  7367
             Q+AL AQ
Sbjct  115   QQALRAQ  121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2530  LISNPWC  2510
             LI   WC
Sbjct  318   LIAEAWC  324


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5872  VGHSLL  5889
             VGH LL
Sbjct  407   VGHGLL  412


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3809  VHLGPYLF  3786
             V LGPY F
Sbjct  507   VFLGPYPF  514


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3258  LGVFPHI  3238
             LGVF H+
Sbjct  552   LGVFNHV  558


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  438  VWASR  452
            VWA R
Sbjct  595  VWAAR  599


 Score = 16.8 bits (32),  Expect(2) = 20658
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = -1

Query  3814  LMFILGL--------IY  3788
             L F LGL        IY
Sbjct  574   LTFLLGLFGYLVFLVIY  590


 Score = 15.1 bits (28),  Expect(2) = 20658
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  3745  FIYLFISSNS  3716
             FI +F  S S
Sbjct  610   FINMFLFSHS  619


 Score = 15.9 bits (30),  Expect(2) = 20661
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  233  ERAPL  219
            ER PL
Sbjct  150  ERTPL  154


 Score = 15.9 bits (30),  Expect(2) = 20661
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  190  RAPLLE  173
            R PLL+
Sbjct  151  RTPLLQ  156


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8277  LVELF----ATY  8300
             LV+LF    A Y
Sbjct  12    LVQLFLPTAAAY  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9025  PPRPRLP  9005
             PP  RLP
Sbjct  81    PPKGRLP  87


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  2758  SERTSIPL  2781
             SERT  PL
Sbjct  149   SERT--PL  154


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8461  CFSR  8450
             CFSR
Sbjct  464   CFSR  467


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4398  MSVAIM  4381
             M VAI+
Sbjct  783   MTVAIL  788


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4030  FYISTGY  4010
             FY  TGY
Sbjct  812   FYSGTGY  818


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4516  PFTF  4505
             PFTF
Sbjct  822   PFTF  825


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  87    PAPPP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1807  DLREVKG  1787
             +LR+V G
Sbjct  107   ELRDVRG  113


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2324  FREL  2335
             FREL
Sbjct  198   FREL  201


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  1480  ILGTKERLLS  1509
             +LG  ER LS
Sbjct  270   VLGETERFLS  279


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7842  PPTIIMNN  7819
             PPT I  N
Sbjct  358   PPTLIRTN  365


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  216  FPFAFRSLFG  187
            FPF F  +FG
Sbjct  396  FPFLFAVMFG  405


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6627  TIMVLAL  6607
             T  VLAL
Sbjct  635   TLVVLAL  641


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7350  EALWA  7364
             E LWA
Sbjct  749   EVLWA  753


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6789  LFHFALLM  6766
             +F FAL M
Sbjct  413   MFLFALAM  420


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8643  LALPVPPFLL  8614
             LAL   P LL
Sbjct  639   LALAMVPILL  648


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  980  HSIPFC  963
            H I FC
Sbjct  719  HTIEFC  724


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4619  ASRQDED  4639
             A RQ+E+
Sbjct  668   ADRQEEN  674


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  951  NEEAAE  968
            +EE AE
Sbjct  701  DEEEAE  706


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  2573  ILLVI--LS  2553
             ILLV   LS
Sbjct  787   ILLVMEGLS  795


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6647  LQMCSAVL  6624
             LQ+  AVL
Sbjct  125   LQLHAAVL  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8321  LERIL  8335
             LER L
Sbjct  182   LERLL  186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5220  SQILG  5206
             SQ+LG
Sbjct  279   SQVLG  283


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8886  LTLLSPGH  8863
             L LL PG+
Sbjct  286   LQLLPPGQ  293


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5915  LLPSTQV  5895
             LLP  QV
Sbjct  288   LLPPGQV  294


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3181  SVGTPHSC  3158
             SV T H C
Sbjct  310   SVSTTHKC  317


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4383  MSTIL  4369
             MS IL
Sbjct  537   MSVIL  541


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3029  LLESL  3015
             LLE L
Sbjct  567   LLETL  571


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8640  LIHSQRR  8660
             L H +RR
Sbjct  655   LLHRHRR  661


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1875  VSNRASF  1855
             VSN AS+
Sbjct  728   VSNTASY  734


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6335  TSYKL  6349
             T YKL
Sbjct  816   TGYKL  820


>ref|NP_835488.1|  CUB domain-containing protein 1 isoform 2 [Homo sapiens]
Length=343

 GENE ID: 64866 CDCP1 | CUB domain containing protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  3243  HITMLSV  3223
             HITMLS+
Sbjct  64    HITMLSI  70


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8005  HSISERI  8025
             HSIS RI
Sbjct  161   HSISGRI  167


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3839  MASDFNL  3859
             MA +FNL
Sbjct  305   MAGNFNL  311


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  3698  W-VPAHKGIG  3724
             W V AHK IG
Sbjct  127   WDVKAHKSIG  136


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4364  GERIV  4378
             GERIV
Sbjct  73    GERIV  77


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5809  GVEMGHHAPW  5838
             GV M  H PW
Sbjct  191   GVKMALHLPW  200


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
 Frame = -1

Query  505  QPSDVSNRPGLT-ANRSS  455
            +P +VS   G   ANRSS
Sbjct  202  HPRNVS---GFSIANRSS  216


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6952  STIKQLC  6932
             S IK LC
Sbjct  215   SSIKRLC  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  5107  HL-SSVSF  5087
             HL  SVSF
Sbjct  259   HLRASVSF  266


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2115  VSIGLMG  2095
             VSI L+G
Sbjct  8     VSIALLG  14


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  6475  SI---ERLIITF  6449
             SI   ER + TF
Sbjct  69    SIKSGERIVFTF  80


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8768  LQASTS  8785
             LQ STS
Sbjct  111   LQPSTS  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  973  IECIQ----CMQG  999
            IE IQ    CM G
Sbjct  91   IE-IQKNIDCMSG  102


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  206  LSGPC  192
            +SGPC
Sbjct  100  MSGPC  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1127  SFINF  1113
             SF NF
Sbjct  265   SFLNF  269


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2243  FLKFSL  2226
             FL F L
Sbjct  266   FLNFNL  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3816  NITV  3827
             NITV
Sbjct  39    NITV  42


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  8678  VDL-PHTRLLP  8707
             V L P T LLP
Sbjct  109   VQLQPSTSLLP  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2003  HKAIG  2017
             HK IG
Sbjct  132   HKSIG  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6492  MSAQY  6506
             MSA Y
Sbjct  236   MSANY  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  5871  NFSVALQ  5851
             NF   LQ
Sbjct  308   NFNLSLQ  314


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2369  IELPR  2355
             I LPR
Sbjct  32    IALPR  36


>ref|NP_000878.2|  integrin alpha-X precursor [Homo sapiens]
Length=1163

 GENE ID: 3687 ITGAX | integrin, alpha X (complement component 3 receptor 4
subunit) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -1

Query  6487  TWS--CSIERLI------ITF  6449
             TWS  C I  LI      ITF
Sbjct  858   TWSTSCRINHLIFRGGAQITF  878


 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 12/26 (46%)
 Frame = +3

Query  2766  NLHSFGWVMNSILINGQYSL*CCQKK  2843
             NL SFGWV   IL          QKK
Sbjct  1050  NL-SFGWVRQ-IL----------QKK  1063


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
 Frame = -2

Query  3480  PLLVTYPAFPNLVSLLAA  3427
             PLL    AF NL  +LAA
Sbjct  742   PLL----AFRNLRPMLAA  755


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  2384  DVVFLIE  2364
             D+VFLI+
Sbjct  151   DIVFLID  157


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  3071  IAEIQKQGQ  3097
             +AE QKQGQ
Sbjct  832   VAEGQKQGQ  840


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8053  EPVPLQLPP  8079
             EP+ LQ PP
Sbjct  77    EPIGLQVPP  85


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -2

Query  6489  VHGPVPLNV------LLL  6454
             VH P PL V      LLL
Sbjct  1102  VHNPTPLIVGSSIGGLLL  1119


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6016  LWVGV  6002
             LWVGV
Sbjct  619   LWVGV  623


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  2946  LRSLHNCLT  2920
             LRSLH  LT
Sbjct  841   LRSLH--LT  847


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 13/27 (48%)
 Frame = +3

Query  8127  DAGGGKPSNIGGISYSIGV------RN  8189
             DA G     I  I Y IGV      RN
Sbjct  277   DAAG-----I--IRYAIGVGLAFQNRN  296


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2314  ISRFQR  2331
             IS FQR
Sbjct  178   ISQFQR  183


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3113  DMSIGLAPAS  3084
             +MS GL  AS
Sbjct  89    NMSLGLSLAS  98


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  688  QQLTQD  705
            Q LTQD
Sbjct  592  QDLTQD  597


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3400  RSRNLL  3417
             RS NLL
Sbjct  661   RSKNLL  666


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2660  VGSDLE  2677
             VGS+LE
Sbjct  795   VGSNLE  800


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2381  HPAGL  2395
             HPAGL
Sbjct  823   HPAGL  827


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2912  LGKSDLPNSI  2883
             LG  DLP SI
Sbjct  960   LGQRDLPVSI  969


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +3

Query  7347  QEALW-----AQPQ  7373
             QEA W      +PQ
Sbjct  979   QEAVWMDVEVSHPQ  992


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7104  VHQILQ  7121
             V QILQ
Sbjct  1056  VRQILQ  1061


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1130  PSFINFS  1110
             P FIN S
Sbjct  388   PTFINMS  394


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7190  DMRD  7201
             DMRD
Sbjct  399   DMRD  402


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +3

Query  6351  QVVTPQSLHRPVQ  6389
             QVV  Q L   VQ
Sbjct  642   QVVSEQTL---VQ  651


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5946  LASDAQ  5929
             LA DAQ
Sbjct  753   LAADAQ  758


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6631  AEHIC  6645
             A+HIC
Sbjct  773   ADHIC  777


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8751  LTFGW  8765
             L FGW
Sbjct  1051  LSFGW  1055


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7109  SNITGLLL  7132
             S I GLLL
Sbjct  1112  SSIGGLLL  1119


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2182  KNKSISR  2202
             KN S SR
Sbjct  696   KNRSLSR  702


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1784  VSFNFP  1801
             +SF FP
Sbjct  783   ISFSFP  788


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1598  VSFLSTF  1578
             + FL TF
Sbjct  876   ITFLATF  882


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7919  FQTH  7930
             FQTH
Sbjct  197   FQTH  200


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6471  MEQDHVQM  6494
             M Q+ V M
Sbjct  393   MSQENVDM  400


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1417  LALW  1406
             LALW
Sbjct  411   LALW  414


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1172  YQHSG  1186
             YQH G
Sbjct  427   YQHTG  431


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4162  LLVGGN  4179
             LLVG N
Sbjct  793   LLVGSN  798


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6410  ELAQRIPLDR  6381
             +L QR P  R
Sbjct  133   QLTQRLPVSR  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6582  TTSSS  6568
             TTSSS
Sbjct  341   TTSSS  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  5218  PNPRKMSNSFI  5186
             PN   MS  FI
Sbjct  384   PN---MSPTFI  391


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2540  LPQGW  2554
             LP GW
Sbjct  497   LPRGW  501


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8168  LQYWSQEL  8191
             LQY  Q L
Sbjct  581   LQYFGQAL  588


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5862  QKNCG  5876
             +KNCG
Sbjct  768   EKNCG  772


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3456  FPNLVSLL  3433
             FP L SLL
Sbjct  787   FPGLKSLL  794


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5177  ELKNEAV  5197
             EL  EAV
Sbjct  976   ELNQEAV  982


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  5833  EHGA--PSPP  5810
             E G   PSPP
Sbjct  1151  ENGTQTPSPP  1160


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = -1

Query  4513  FTFPEE  4496
             FTF EE
Sbjct  201   FTF-EE  205


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 11/17 (64%), Gaps = 0/17 (0%)
 Frame = +2

Query  4394  DIQTKELQKQITKIQNF  4444
             DI  K  Q +I K+++F
Sbjct  303   DIASKPSQEHIFKVEDF  319


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7493  QLQARILAVE  7522
             QL   I A+E
Sbjct  328   QLKEKIFAIE  337


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7887  FTIESTAKT  7861
             F IE T  T
Sbjct  334   FAIEGTETT  342


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4039  NFCFYI  4022
             N C YI
Sbjct  653   NICLYI  658


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  138  RSLRP  152
            R LRP
Sbjct  747  RNLRP  751


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7040  INMWQ  7054
             INM Q
Sbjct  391   INMSQ  395


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  8137  VGSPQILVES  8166
             V S Q LV+S
Sbjct  643   VVSEQTLVQS  652


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8442  SRDLE  8456
             SRDL+
Sbjct  668   SRDLQ  672


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5884  LLWGTCVEGS  5913
             LL   CVE S
Sbjct  717   LLLPSCVEDS  726


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  207  AFRSL  193
            AFR L
Sbjct  745  AFRNL  749


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6274  GAERIC  6291
             GA+ IC
Sbjct  772   GADHIC  777


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4945  IAESEKQ  4925
             +AE +KQ
Sbjct  832   VAEGQKQ  838


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2427  WVMHIFQ  2447
             WV +I Q
Sbjct  1055  WVRQILQ  1061


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  5136  CGPWSSGAC  5110
             CG  S GAC
Sbjct  69    CG-YSTGAC  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8671  LICGSTTH  8694
             L CG T H
Sbjct  106   LACGPTVH  113


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8148  RASHPL  8131
             R S PL
Sbjct  208   RSSNPL  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4755  IPLGDA  4772
             IP+ DA
Sbjct  273   IPMADA  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  6788  NTLKQIASKLRE  6823
             + LK I   L E
Sbjct  320   DALKDIQNQLKE  331


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5352  VTRQRR  5369
             V RQ R
Sbjct  439   VSRQWR  444


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3259  FRSLSP  3242
             FR L P
Sbjct  746   FRNLRP  751


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7678  VNFSVP  7661
             +NF VP
Sbjct  969   INFWVP  974


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1297  KVSVI  1283
             KVSV+
Sbjct  1063  KVSVV  1067


>ref|NP_777601.2|  scavenger receptor cysteine-rich type 1 protein M160 precursor 
[Homo sapiens]
Length=1453

 GENE ID: 283316 CD163L1 | CD163 molecule-like 1 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  8870  GERSVRV  8890
             GERSVRV
Sbjct  956   GERSVRV  962


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 1/18 (5%)
 Frame = -3

Query  2603  ALRFLSCYFGILLVILSI  2550
             AL  LS  FG LL +L I
Sbjct  1361  AL-ILSSIFGLLLLVLFI  1377


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6562  SSRRRGS  6582
             S RRRGS
Sbjct  1396  STRRRGS  1402


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6563  LAEEEVV  6583
             LAE EVV
Sbjct  1277  LAEAEVV  1283


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +3

Query  5781  RRNIST-----------CGDGG  5813
             RRNI T           CG+ G
Sbjct  1169  RRNITTAIAGIVCRQLGCGENG  1190


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  9082  TGSLWLD  9102
             TG  WLD
Sbjct  1305  TGTIWLD  1311


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7464  RCCC  7453
             RCCC
Sbjct  14    RCCC  17


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +1

Query  7621  IS---GTDLE  7641
             IS   GTDLE
Sbjct  38    ISSFNGTDLE  47


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8006  IRLVNG  8023
             +RLVNG
Sbjct  900   VRLVNG  905


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1776  CLSAP  1762
             CLSAP
Sbjct  1222  CLSAP  1226


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8009  RLVNG  8023
             RLVNG
Sbjct  49    RLVNG  53


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4079  LKLAGRW  4099
             LK  GRW
Sbjct  277   LKIQGRW  283


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6779  KWNN  6790
             KWNN
Sbjct  290   KWNN  293


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  511  CLQPSDVS  488
            CL+  DVS
Sbjct  351  CLHQNDVS  358


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5479  GNESN  5465
             GNESN
Sbjct  547   GNESN  551


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7183  SRSEDLGLI  7157
             S SED G I
Sbjct  673   SHSEDVGVI  681


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9079  CTGSL  9093
             CTGSL
Sbjct  999   CTGSL  1003


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4174  GNQAGIWN  4197
             GN+  IW+
Sbjct  547   GNESNIWD  554


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5238  CCPKPWSQ  5215
             C  KPW Q
Sbjct  1325  CHAKPWGQ  1332


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8444  RCCSH  8430
             RCC H
Sbjct  14    RCCCH  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9    WLDQI  23
            WLD I
Sbjct  218  WLDDI  222


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9094  WLDQI  9108
             WLD I
Sbjct  218   WLDDI  222


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8652  GSELAL  8635
             G ELAL
Sbjct  226   GNELAL  231


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 13/21 (61%)
 Frame = +1

Query  3154  IC----KNE---------GCP  3177
             IC    KNE         GCP
Sbjct  393   ICDQNWKNEQALVVCKQLGCP  413


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  6267  LMLVL-IL  6247
             L+LVL IL
Sbjct  1371  LLLVLFIL  1378


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6859  LLKDYCFIIS  6830
             LL + CF IS
Sbjct  30    LLLNSCFLIS  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6191  NSSSGRMIMEKGEIK  6235
             NS SGR      E+K
Sbjct  162   NSCSGRV-----EVK  171


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2845  QLDC  2856
             QLDC
Sbjct  623   QLDC  626


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2781  GWVMN  2795
             GW MN
Sbjct  718   GWGMN  722


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1300  NKVSVI  1283
             N VSVI
Sbjct  993   NTVSVI  998


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2810  IYQDG  2796
             IY+DG
Sbjct  1051  IYHDG  1055


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 20/40 (50%)
 Frame = +2

Query  6179  DTNTNSSSGRMIMEKGEIKNCSF-----------NISTSI  6265
             +T T S  GR+     E+    F           NI T I
Sbjct  1146  ETETESCAGRL-----EV----FYNGTWGSVGRRNITTAI  1176


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3628  IWLCL  3614
             IW CL
Sbjct  1219  IWQCL  1223


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4626  DRMRIR  4643
             DR R+R
Sbjct  1244  DRIRVR  1249


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -2

Query  4791  MLLLPI*HPLVGCVLLNLFL  4732
             +LLL         VL  LFL
Sbjct  1370  LLLL---------VLFILFL  1380


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3293  FPMFPF  3276
             F MF F
Sbjct  95    FAMFRF  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8158  VESPTVL  8178
             V SP VL
Sbjct  208   VNSPAVL  214


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8709  QGSSLVC  8689
             +GS L+C
Sbjct  1024  EGSALIC  1030


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2207  CTEME  2221
             CT ME
Sbjct  1105  CTGME  1109


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 2/9 (22%)
 Frame = +2

Query  9014  W--PGRDWG  9034
             W  P R WG
Sbjct  1113  WQCPSRGWG  1121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8428  GWEQH  8442
             GW QH
Sbjct  1119  GWGQH  1123


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7109  SNITGLLL  7132
             S I GLLL
Sbjct  1365  SSIFGLLL  1372


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3154  ICKNEGCP  3177
             +CK  GCP
Sbjct  85    VCKQLGCP  92


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  531  PSLQTGSE  554
            P LQ GS+
Sbjct  315  PHLQSGSD  322


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/17 (35%), Positives = 6/17 (35%), Gaps = 9/17 (52%)
 Frame = +1

Query  3997  GSSSCS---------QW  4020
             GS  CS         QW
Sbjct  374   GSNNCSGRVEVRIHEQW  390


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2099  WENLKCNQSE  2070
             W N  C +SE
Sbjct  667   WGNNDCSHSE  676


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  732  PIVQ  743
            PIVQ
Sbjct  875  PIVQ  878


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3813  RNIT  3824
             RNIT
Sbjct  1170  RNIT  1173


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2472  FLKSSSKGTE  2443
             FL SS  GT+
Sbjct  36    FLISSFNGTD  45


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8009  RLVNG  8023
             RLV+G
Sbjct  156   RLVDG  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  1905  ISSNTVSSAPV  1873
             ISS  V S  V
Sbjct  203   ISSGVVNSPAV  213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  6274  LTSYACADIE  6245
             LT Y   D E
Sbjct  252   LTCYDSSDLE  261


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  303  FGVLTSRR--PS  274
            F V  SRR  PS
Sbjct  414  FSVFGSRRAKPS  425


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1859  EALLD  1873
             E LLD
Sbjct  973   ESLLD  977


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8009  RLVNG  8023
             RLV+G
Sbjct  1037  RLVDG  1041


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8987  KSLVASS  8967
             KSL ASS
Sbjct  1351  KSLNASS  1357


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2663  GSDLE  2677
             G DLE
Sbjct  43    GTDLE  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4121  DNGSNFTGATV  4153
             D+G N T  TV
Sbjct  74    DDGWNTTASTV  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             V LTC
Sbjct  250   VTLTC  254


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2666  SDLE  2677
             SDLE
Sbjct  258   SDLE  261


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7797  QIGCG  7811
             Q GCG
Sbjct  302   QLGCG  306


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  4201  GNSKFLLDSR  4172
             GN  FL D R
Sbjct  333   GNESFLWDCR  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2663  GSDLE  2677
             G DLE
Sbjct  364   GADLE  368


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  5321  QNW  5329
             QNW
Sbjct  396   QNW  398


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6851  FKQSSG  6868
             FK+ SG
Sbjct  531   FKEASG  536


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
 Frame = +1

Query  6631  AEHICRN*LyktqqqykkkNP-YPERT  6708
             AE +CR  L           P + ERT
Sbjct  724   AEVVCRQ-LECGSAIRVSREPHFTERT  749


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7512  WLWKDT  7529
             W WK T
Sbjct  772   WEWKQT  777


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7805  ANLLC  7791
             AN LC
Sbjct  829   ANVLC  833


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5490  ETNLAM  5473
             ET LA+
Sbjct  868   ETHLAL  873


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7207  PIVPH  7193
             PIV H
Sbjct  875   PIVQH  879


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  96    QVVCARLLCDS  128
             +VVC  L C S
Sbjct  1281  EVVCQQLGCGS  1291


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6780  FALLML  6763
             F LL+L
Sbjct  1368  FGLLLL  1373


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7522  FHSQDSCL  7499
             FH  + CL
Sbjct  1408  FHEMETCL  1415


>gb|AAH04887.2|  LANCL2 protein [Homo sapiens]
Length=252

 GENE ID: 55915 LANCL2 | LanC lantibiotic synthetase component C-like 2
(bacterial) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = +2

Query  3908  LKGEAMHGQVDCSPGIWQ  3961
             LK EAM    +CS  IWQ
Sbjct  146   LK-EAM----ECSDVIWQ  158


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  3635  ES---ELVNQIIE  3664
             ES   E VN IIE
Sbjct  23    ESAIKEVVNAIIE  35


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = -2

Query  2508  SLFILGMVNAVYFL  2467
             SLF  GM  A+ FL
Sbjct  218   SLFE-GMAGAIHFL  230


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 5/22 (22%)
 Frame = -3

Query  3695  PDRPFPflltallfd*ltLIHF  3630
             PDRP+              IHF
Sbjct  213   PDRPYSLFEGMAGA-----IHF  229


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7520  ERYLKD  7537
             E YLK+
Sbjct  143   EKYLKE  148


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  438  LYVLIY  421
            LY L Y
Sbjct  6    LYALLY  11


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 6/22 (27%)
 Frame = +2

Query  6989  NTE-GSDTITLPC--RIKQIIN  7045
             NTE G  T+   C   IK+++N
Sbjct  13    NTEIGPGTV---CESAIKEVVN  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1435  IASAKTL  1415
             I S KTL
Sbjct  34    IESGKTL  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2925  GNYVNSL  2945
             GNY  SL
Sbjct  106   GNYPSSL  112


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2405  FSFLTL  2388
             +SFL L
Sbjct  177   YSFLSL  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  694  LTQD  705
            LTQD
Sbjct  185  LTQD  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3976  FRRKSYPGS  4002
             FR   YP S
Sbjct  103   FRSGNYPSS  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1789  GYSSLS  1772
             GYS LS
Sbjct  176   GYSFLS  181


>gb|AAC43024.1|  anti-mucin1 heavy chain variable region [Homo sapiens]
Length=124


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 0/16 (0%)
 Frame = +2

Query  5873  WVTVYYGVPVWKEATT  5920
             WV  YYG  VW + TT
Sbjct  105   WVYYYYGMDVWGQGTT  120


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 7/14 (50%)
 Frame = -1

Query  4561  SWHYFYVTIILYYY  4520
             SW Y       YYY
Sbjct  104   SWVY-------YYY  110


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6628  YYYG  6617
             YYYG
Sbjct  108   YYYG  111


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  70    ISRDNSKNTL  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


>gb|AAA36074.1|  immunoglobulin heavy chain VDJC region [Homo sapiens]
Length=127


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5464  TFYNSNWY  5441
             T+Y SNWY
Sbjct  23    TYYRSNWY  30


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             W+R+SP
Sbjct  8     WIRQSP  13


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + PSKG+E
Sbjct  11    QSPSKGLE  18


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 9/27 (33%)
 Frame = +1

Query  241  DSA---C*SAHGKRRGAATGEYAKNFD  312
            D A   C  A G RR AAT  Y  +FD
Sbjct  63   DTAVYYC--ARG-RRVAAT--YG-DFD  83


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TIN    KN
Sbjct  42    TINPDTSKN  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5107  HLSSV  5093
             HL SV
Sbjct  55    HLTSV  59


>ref|NP_036439.2|  band 4.1-like protein 3 [Homo sapiens]
Length=1087

 GENE ID: 23136 EPB41L3 | erythrocyte membrane protein band 4.1-like 3
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 5/23 (21%)
 Frame = -2

Query  4608  SPAI--CFP*SLMIFAFLLGTTF  4546
             SP    CF   L IF FLL   F
Sbjct  629   SPSLVPCF---LFIFFFLLSASF  648


 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +3

Query  3708  HTKELE----EMNK  3737
             HTKELE    E+ K
Sbjct  259   HTKELEDKVIELHK  272


 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +1

Query  7342  SSRKHY--GRSLNDADGTGQ  7395
             SS K Y   RSL+   GTGQ
Sbjct  433   SSSKRYTMSRSLDGEVGTGQ  452


 Score = 23.1 bits (47),  Expect(2) =   309
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -2

Query  417  FSFPLALTEFFP  382
            FSF L L E FP
Sbjct  586  FSFSLQLPESFP  597


 Score = 17.2 bits (33),  Expect(2) =   309
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  296  YSPVAAPRLLPC  261
            Y P+  P L PC
Sbjct  624  YLPIRSPSLVPC  635


 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 18/35 (51%)
 Frame = -2

Query  459  LAPCLPILYVLIYIF--------------SFPLAL  397
            L PC   L+  I+ F              SFPLAL
Sbjct  632  LVPC--FLF--IFFFLLSASFSVPYALTLSFPLAL  662


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 19/41 (46%)
 Frame = -2

Query  2475  YFLKSSSK------------GTEKYA-----SPTS--STVT  2410
             YF  SSSK            GT  YA     S T    TVT
Sbjct  429   YFERSSSKRYTMSRSLDGEVGTGQYATTKGISQTNLITTVT  469


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  5887  LWGTCVEGSNHH  5922
             LW  CVE   HH
Sbjct  376   LWKVCVE---HH  384


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1918  KMETK  1932
             KMETK
Sbjct  825   KMETK  829


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3233  CFLWLFF  3213
             CFL  FF
Sbjct  635   CFLFIFF  641


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  852  SALSEGA  872
            SAL EGA
Sbjct  895  SALTEGA  901


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7341  EQQEAL  7358
             EQQ+AL
Sbjct  40    EQQQAL  45


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6594  TDLITT  6577
             T+LITT
Sbjct  462   TNLITT  467


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3170  PSFLHIFLF  3144
             P FL IF F
Sbjct  634   PCFLFIFFF  642


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/32 (31%), Positives = 12/32 (37%), Gaps = 18/32 (56%)
 Frame = +1

Query  4996  QDITR*DLYNTWH*QH**HQKR*SHLCLVLRN  5091
             +DITR   Y                LCL LR+
Sbjct  198   EDITR---Y---------------YLCLQLRD  211


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4869  STQVDP  4886
             S QVDP
Sbjct  989   SSQVDP  994


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5092  SFVTL  5078
             SFVTL
Sbjct  221   SFVTL  225


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7627  GTDLE  7641
             GTDLE
Sbjct  995   GTDLE  999


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6002  LWVHRHVWPK  5973
             L + R  WPK
Sbjct  327   LRINRFAWPK  336


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7064  FLLSA  7050
             FLLSA
Sbjct  642   FLLSA  646


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  3251  SFPI-L-LCFL  3225
             SFP  L LC+L
Sbjct  657   SFPLALCLCYL  667


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +3

Query  4452  ITGTAEI-HFGKDQ  4490
             ITG A+I H   DQ
Sbjct  1041  ITGDADIDH---DQ  1051


 Score = 16.8 bits (32),  Expect(2) = 15502
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6680  RKRIRIQR  6703
             R R RI R
Sbjct  324   RDRLRINR  331


 Score = 15.5 bits (29),  Expect(2) = 15502
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  6718  ICYNRKN  6738
             I Y R N
Sbjct  340   ISYKRNN  346


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3977  LEGKVI  3994
             LE KVI
Sbjct  263   LEDKVI  268


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6202  ATTIGIS  6182
             ATT GIS
Sbjct  454   ATTKGIS  460


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 14/25 (56%)
 Frame = -1

Query  4255  FL*FFIHRFY----------YSLTL  4211
             FL  FI  F+          Y LTL
Sbjct  636   FL--FI--FFFLLSASFSVPYALTL  656


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5961  SVSYAL  5944
             SV YAL
Sbjct  649   SVPYAL  654


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6014  QEVVLV  6031
             QE VLV
Sbjct  853   QETVLV  858


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8041  GRSAEPVP  8064
             GR   PVP
Sbjct  27    GRAGAPVP  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 12/32 (37%)
 Frame = +2

Query  2453  LDEDFRKYTAFTIPSINNETPGIRYQYNVLPQ  2548
             LD+D   Y  F  P    ET       N LPQ
Sbjct  600   LDDD--GYLSF--PNLS-ET-------NLLPQ  619


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6486  VQMSAQ  6503
             V MSAQ
Sbjct  1002  VLMSAQ  1007


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3480  EDKKLS  3497
             ED KLS
Sbjct  83    EDDKLS  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  5856  LQIINIPRSM  5827
             L I+  P SM
Sbjct  101   LKIVKKPKSM  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8729  RARGQI  8746
             R RGQ+
Sbjct  129   RSRGQV  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6504  YNVHMELG  6527
             Y V+ ELG
Sbjct  231   YTVQSELG  238


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  181  VAPEQGPESERE  216
            V PE   E ER+
Sbjct  468  VTPEKKAEEERD  479


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2687  HRTKIEEL  2710
             H T I EL
Sbjct  731   HQTNISEL  738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  1697  ANS-PTRRE  1720
             A S P RRE
Sbjct  53    AHSTPVRRE  61


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3767  KVLFLDG  3787
             KV  LDG
Sbjct  113   KVILLDG  119


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5135  VALGLLG  5115
             V L LLG
Sbjct  223   VTLALLG  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4400  QTKELQ  4417
             +TKEL+
Sbjct  259   HTKELE  264


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8249  DRVIE  8263
             D VIE
Sbjct  265   DKVIE  269


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2014  RYSISR  2031
             RY  SR
Sbjct  437   RYTMSR  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2741  TPDKK  2755
             TP+KK
Sbjct  469   TPEKK  473


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1405  AIRQE  1419
             AIR+E
Sbjct  496   AIRHE  500


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3349  YPSLSE  3366
             +P LSE
Sbjct  608   FPNLSE  613


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2414  LLIFSFL  2394
             L IF FL
Sbjct  637   LFIFFFL  643


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2084  TLNFP  2098
             TL FP
Sbjct  655   TLSFP  659


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7277  RRVVQ  7291
             RRVV+
Sbjct  861   RRVVH  865


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  615   IKDTKE  632
             IK+ KE
Sbjct  1057  IKEAKE  1062


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5761  DSGNESE  5781
             +SG +SE
Sbjct  4     ESGSDSE  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6919  EKFPSTI  6899
             E F STI
Sbjct  357   EQFESTI  363


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  286  TGEYA  300
            TG+YA
Sbjct  450  TGQYA  454


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5406  LEASRK  5423
             LE  RK
Sbjct  802   LESARK  807


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4355  YSAGE  4369
             YSAG+
Sbjct  872   YSAGD  876


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6977  EGSNNTEG  7000
             EGS  TEG
Sbjct  893   EGSALTEG  900


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  258  RARQE  272
            R RQE
Sbjct  924  RERQE  928


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3885  TISF  3874
             TISF
Sbjct  955   TISF  958


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1323  CKTIL  1337
             CK IL
Sbjct  112   CKVIL  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5497  KALGISY  5517
             K L ISY
Sbjct  336   KVLKISY  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 6/14 (42%)
 Frame = -2

Query  7308  TALFSLCTTLLFAL  7267
             T LFS      F L
Sbjct  583   TTLFS------FSL  590


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2228  LPFPSL  2211
             L FP L
Sbjct  606   LSFPNL  611


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = -2

Query  1290  LSSNFLPPVKLA  1255
             LS     PV LA
Sbjct  759   LSTS---PVRLA  767


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3389  EPIVGAET  3412
             EP V  ET
Sbjct  777   EPLVPEET  784


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1041  IAGTTST  1061
             I G TST
Sbjct  812   IGGVTST  818


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  155  KGSEGS  138
            KG EGS
Sbjct  890  KGKEGS  895


>gb|AAY57174.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=96


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 6/22 (27%)
 Frame = -3

Query  8795  IWLNWY*LV--APSKG-QWISD  8739
             IW+ W   V  AP KG +W+ +
Sbjct  18    IWMTW---VRQAPGKGLEWVAN  36


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E FYVD
Sbjct  41    GSEKFYVD  48


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5204  FPRIWL  5221
             F RIW+
Sbjct  15    FSRIWM  20


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 36/56 (64%)
 Frame = +3

Query  1188  IRQGP----------KEPFRD-----YVD----RF-----------Y---KTLRAE  1256
             +RQ P          KE   D     YVD    RF           Y     LRAE
Sbjct  23    VRQAPGKGLEWVANIKE---DGSEKFYVDSVKGRFTISRDNAKMSVYLQMNSLRAE  75


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8287  SSTSSLYY  8264
             SSTS  YY
Sbjct  89    SSTSCPYY  96


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3193  TINRGSAK  3216
             TI R  AK
Sbjct  55    TISRDNAK  62


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  19    WMTWVRQ  25


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIK+D
Sbjct  36    NIKED  40


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3940  VYLSM  3926
             VYL M
Sbjct  65    VYLQM  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2701  YFCSMLPY  2678
             Y+C   PY
Sbjct  80    YYCARAPY  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  8     CAASGF  13


>gb|AAY33399.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +3

Query  8715  QNYTPGPGVRYPLTFG  8762
             Q+Y       YPLTFG
Sbjct  90    QDYN------YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  74    TISSLQPEDFATYYCL  89


>gb|AAY16596.1|  immunoglobulin kappa light chain [Homo sapiens]
Length=127


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 14/27 (51%)
 Frame = -1

Query  2176  CQ----WPLFNF-----WAIHS---WL  2132
             CQ    WPLF F     W I S   WL
Sbjct  96    CQQRSNWPLFTFGPGPKW-I-SNELWL  120


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = +1

Query  8056  PVPLQLPPLERLTLDC  8103
             P  L L P ER TL C
Sbjct  8     PATLSLSPGERATLSC  23


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8744  ISTDLWM  8764
             IS +LW+
Sbjct  114   ISNELWL  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5877  SQSIMGYL  5900
             SQS+  YL
Sbjct  26    SQSVSSYL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4436  QNFRVYY  4456
             ++F VYY
Sbjct  81    EDFAVYY  87


 Score = 15.9 bits (30),  Expect(2) = 44142
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  6984  QITLKEVTQSP  7016
             +I L   TQSP
Sbjct  1     EIVL---TQSP  8


 Score = 15.9 bits (30),  Expect(2) = 44142
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7013  TLPCR  7027
             TL CR
Sbjct  20    TLSCR  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4153  NRSTGEIAA  4127
             NR TG I A
Sbjct  53    NRATG-IPA  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  948  WSLLTF  931
            W L TF
Sbjct  102  WPLFTF  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  1872  SNRAS-----FS  1852
             SNRA      FS
Sbjct  52    SNRATGIPARFS  63


>gb|AAU20795.1|  T-cell immune regulator 1 transcript variant 4 [Homo sapiens]
Length=218

 GENE ID: 10312 TCIRG1 | T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/8 (75%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +2

Query  2315  LVDFRELN  2338
             LV+FR+LN
Sbjct  34    LVEFRDLN  41


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  6410  ELAQRIPLDRPV  6375
             EL Q  PL+ PV
Sbjct  200   ELEQ--PLEHPV  209


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  7421  QQNNLLRAIEAQQHLLQL  7474
             QQ   LRA   Q H LQL
Sbjct  115   QQA--LRA---QLHQLQL  127


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  247  PSPASRELLWFPFRFQ  200
            P P  R+LL    R Q
Sbjct  87   PAPPPRDLL----RIQ  98


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8074  PPLERL  8091
             P LERL
Sbjct  180   PALERL  185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4512  SPFQRSF  4492
             S FQR F
Sbjct  45    SAFQRRF  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7347  QEALWAQ  7367
             Q+AL AQ
Sbjct  115   QQALRAQ  121


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8277  LVELF----ATY  8300
             LV+LF    A Y
Sbjct  12    LVQLFLPTAAAY  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9025  PPRPRLP  9005
             PP  RLP
Sbjct  81    PPKGRLP  87


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  2758  SERTSIPL  2781
             SERT  PL
Sbjct  149   SERT--PL  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  87    PAPPP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1807  DLREVKG  1787
             +LR+V G
Sbjct  107   ELRDVRG  113


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2324  FREL  2335
             FREL
Sbjct  198   FREL  201


 Score = 15.9 bits (30),  Expect(2) = 35582
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  233  ERAPL  219
            ER PL
Sbjct  150  ERTPL  154


 Score = 15.9 bits (30),  Expect(2) = 35582
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  190  RAPLLE  173
            R PLL+
Sbjct  151  RTPLLQ  156


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6647  LQMCSAVL  6624
             LQ+  AVL
Sbjct  125   LQLHAAVL  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8321  LERIL  8335
             LER L
Sbjct  182   LERLL  186


>gb|AAS59834.1|  T-cell immune regulator 1 transcript variant 4 [Homo sapiens]
Length=125

 GENE ID: 10312 TCIRG1 | T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/8 (75%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +2

Query  2315  LVDFRELN  2338
             LV+FR+LN
Sbjct  34    LVEFRDLN  41


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  247  PSPASRELLWFPFRFQ  200
            P P  R+LL    R Q
Sbjct  87   PAPPPRDLL----RIQ  98


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4512  SPFQRSF  4492
             S FQR F
Sbjct  45    SAFQRRF  51


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8277  LVELF----ATY  8300
             LV+LF    A Y
Sbjct  12    LVQLFLPTAAAY  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9025  PPRPRLP  9005
             PP  RLP
Sbjct  81    PPKGRLP  87


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  87    PAPPP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1807  DLREVKG  1787
             +LR+V G
Sbjct  107   ELRDVRG  113


>ref|NP_055830.1|  lysine-specific demethylase 4B [Homo sapiens]
Length=1096

 GENE ID: 23030 KDM4B | lysine (K)-specific demethylase 4B [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -3

Query  9047  EGSPLPSPAQATPPWKVPS  8991
             E SPLP P    PP  VPS
Sbjct  498   EESPLPAPLNVVPP-EVPS  515


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +1

Query  940  KRPSMRKLQNGIECIQC  990
            KR  M K   G  CIQC
Sbjct  857  KR--MKKV-SG-ACIQC  869


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7505  RILAVERY  7528
             RIL  ERY
Sbjct  323   RILQPERY  330


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  8225  AIAVAEGTDR---VIE  8263
             AIAV E   R   VIE
Sbjct  821   AIAVPEA--RFLNVIE  834


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +2

Query  6047  FNMWK-------NDM  6070
             F MWK        DM
Sbjct  179   FGMWKTTFAWHTEDM  193


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6276  CRKNM  6290
             CRK+M
Sbjct  309   CRKDM  313


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4903  SWSASSGS  4880
             SWSAS  S
Sbjct  357   SWSASRAS  364


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             P PLNV
Sbjct  503   PAPLNV  508


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7577  ICTTAVP  7597
             IC  AVP
Sbjct  819   ICAIAVP  825


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7347  QEALW  7361
             +EALW
Sbjct  476   EEALW  480


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +1

Query  6001  RPQPTRS  6021
             RP PTRS
Sbjct  617   RP-PTRS  622


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3922  HAWT  3933
             HAWT
Sbjct  791   HAWT  794


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6065  DMVE  6076
             DMVE
Sbjct  159   DMVE  162


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6890  HSFNC  6904
             H FNC
Sbjct  282   HGFNC  286


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1605  SFGVLP  1588
             SFG LP
Sbjct  458   SFGLLP  463


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  4585  IPNDLCFSS  4559
             IP ++CF S
Sbjct  728   IP-EMCFTS  735


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1764  PASEGE  1747
             P SEGE
Sbjct  976   PPSEGE  981


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3632  SESELV  3649
             SE ELV
Sbjct  978   SEGELV  983


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2462  DFRKYTAF  2485
             DF KY A+
Sbjct  27    DFNKYVAY  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5285  IRILQ  5299
             +RILQ
Sbjct  322   VRILQ  326


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5897  PVWKE  5911
             P WKE
Sbjct  559   PTWKE  563


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5496  CYETN  5482
             CYE N
Sbjct  947   CYEVN  951


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -1

Query  4513  FTFPEELCWSFPK  4475
             FT  EEL    PK
Sbjct  1024  FTLEEEL----PK  1032


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6633  SCTIM  6619
             SC IM
Sbjct  12    SCKIM  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2072  ESTDF  2058
             EST+F
Sbjct  288   ESTNF  292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  453  PCLPILYV  430
            P  P LYV
Sbjct  524  PIIPMLYV  531


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7731  KRMNK  7745
             KRM K
Sbjct  857   KRMKK  861


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2642  YMDDLY  2659
             Y D+LY
Sbjct  957   YSDNLY  962


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2096  PISPIE  2113
             P+SP E
Sbjct  564   PVSPME  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7706  LRSVLSL  7686
             LR  LSL
Sbjct  652   LRPLLSL  658


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  5366  PLSSNAY  5346
             PL  N Y
Sbjct  742   PLPANSY  748


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3641  ELVNQ  3655
             ELVN+
Sbjct  777   ELVNE  781


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  2278  KYW  2270
             KYW
Sbjct  121   KYW  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2499  ILGMV  2485
             IL MV
Sbjct  157   ILDMV  161


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5751  KSRRQ  5765
             KSRR+
Sbjct  609   KSRRH  613


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8832  LLHPVSL  8852
             LL  VSL
Sbjct  915   LLRAVSL  921


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5050  VINAAS  5033
             VI AAS
Sbjct  939   VIGAAS  944


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4003  CYQDNF  3986
             CY+ NF
Sbjct  947   CYEVNF  952


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  9028  LGSGEPSDPAY  9060
             L  G P +PA+
Sbjct  1040  LSTGAPQEPAF  1050


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5120  EDQGPQ  5137
             ED+G Q
Sbjct  4     EDHGAQ  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1314  NPDCK  1328
             NP CK
Sbjct  10    NPSCK  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5178  SLRMKLL  5198
             SL  KLL
Sbjct  364   SLKAKLL  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7857  LKPTK  7843
             L PTK
Sbjct  445   LRPTK  449


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/7 (42%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  7476  VSCNRCC  7456
             + C  CC
Sbjct  758   IACGKCC  764


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  229   LSTQDS  246
             L T+DS
Sbjct  1067  LATEDS  1072


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  528   VAVPVFVYSLL  496
             VA   FV SLL
Sbjct  1079  VA---FVESLL  1086


>ref|NP_073753.3|  CUB domain-containing protein 1 isoform 1 [Homo sapiens]
Length=836

 GENE ID: 64866 CDCP1 | CUB domain containing protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  3243  HITMLSV  3223
             HITMLS+
Sbjct  64    HITMLSI  70


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8005  HSISERI  8025
             HSIS RI
Sbjct  161   HSISGRI  167


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3839  MASDFNL  3859
             MA +FNL
Sbjct  305   MAGNFNL  311


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8903  PPSISSRGP  8929
             PP I SR P
Sbjct  776   PPTICSRAP  784


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  4338  FL---L-KLWMN  4315
             FL   L  LWMN
Sbjct  399   FLCDDLTRLWMN  410


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  3698  W-VPAHKGIG  3724
             W V AHK IG
Sbjct  127   WDVKAHKSIG  136


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  7103  CSSNITGLLLT  7135
             CSSN T   LT
Sbjct  383   CSSNLT---LT  390


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4364  GERIV  4378
             GERIV
Sbjct  73    GERIV  77


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  3862  WQVKITSHCSP  3830
             W V I S CSP
Sbjct  637   W-VNI-SNCSP  645


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5809  GVEMGHHAPW  5838
             GV M  H PW
Sbjct  191   GVKMALHLPW  200


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
 Frame = -1

Query  505  QPSDVSNRPGLT-ANRSS  455
            +P +VS   G   ANRSS
Sbjct  202  HPRNVS---GFSIANRSS  216


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6952  STIKQLC  6932
             S IK LC
Sbjct  215   SSIKRLC  221


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  8529  EEEVGFPVTP  8558
             EE V F VTP
Sbjct  543   EEGV-FTVTP  551


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  1671  GNFLQSRPE  1697
             G FLQ  PE
Sbjct  752   GSFLQ--PE  758


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  9025  PPRPRLPGKSPAES  8984
             PPR      SP ES
Sbjct  794   PPR------SPPES  801


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  199  PESERE  216
            PESE E
Sbjct  799  PESESE  804


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  5107  HL-SSVSF  5087
             HL  SVSF
Sbjct  259   HLRASVSF  266


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7586  TAVPWNAS  7609
             T V WN S
Sbjct  572   TSVSWNIS  579


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2115  VSIGLMG  2095
             VSI L+G
Sbjct  8     VSIALLG  14


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  6475  SI---ERLIITF  6449
             SI   ER + TF
Sbjct  69    SIKSGERIVFTF  80


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8768  LQASTS  8785
             LQ STS
Sbjct  111   LQPSTS  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2769  LHSFGW  2786
             LH F W
Sbjct  443   LHDFSW  448


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4500  RSFAGPFQ  4477
             R FA  FQ
Sbjct  518   RTFAPSFQ  525


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  973  IECIQ----CMQG  999
            IE IQ    CM G
Sbjct  91   IE-IQKNIDCMSG  102


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  206  LSGPC  192
            +SGPC
Sbjct  100  MSGPC  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1127  SFINF  1113
             SF NF
Sbjct  265   SFLNF  269


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2243  FLKFSL  2226
             FL F L
Sbjct  266   FLNFNL  271


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3982  RKSY  3993
             RKSY
Sbjct  425   RKSY  428


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5305  QLLQNS  5288
             +LLQ+S
Sbjct  745   HLLQDS  750


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3816  NITV  3827
             NITV
Sbjct  39    NITV  42


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  8678  VDL-PHTRLLP  8707
             V L P T LLP
Sbjct  109   VQLQPSTSLLP  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2003  HKAIG  2017
             HK IG
Sbjct  132   HKSIG  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6492  MSAQY  6506
             MSA Y
Sbjct  236   MSANY  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  5871  NFSVALQ  5851
             NF   LQ
Sbjct  308   NFNLSLQ  314


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6588  DLSISRTM  6611
             DLS  R M
Sbjct  348   DLSNERAM  355


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6778  CSTNVTM  6758
             CS N T+
Sbjct  383   CSSNLTL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -3

Query  8342  LIAKSFPSPVLFF  8304
             L+A   PS  L+F
Sbjct  483   LVASAIPSQDLYF  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7487  IKQLQ  7501
             IKQ Q
Sbjct  504   IKQIQ  508


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5880  VTHNFSVAL  5854
             V +N SV L
Sbjct  509   VKQNISVTL  517


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3804  SWALSIP  3784
             SW  S+P
Sbjct  575   SWNISVP  581


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7899  CLTLF  7885
             CLT F
Sbjct  587   CLTFF  591


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3989  VILVA  4003
             VIL+A
Sbjct  668   VILIA  672


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5821  PSPP  5810
             PSPP
Sbjct  774   PSPP  777


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1770  SAPASEGE  1747
             S P SE E
Sbjct  797   SPPESESE  804


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1576  GNVERKDT  1599
             G+V  KDT
Sbjct  814   GDVSSKDT  821


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7339  QEPKE  7325
             QEP E
Sbjct  829   QEPME  833


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2369  IELPR  2355
             I LPR
Sbjct  32    IALPR  36


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6964  TIKPSTIKQ  6938
             TI P  +KQ
Sbjct  358   TIEPRPVKQ  366


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -3

Query  980  HSIPFCSFLIDGL  942
            H I   SFL D L
Sbjct  395  HKI---SFLCDDL  404


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2678  IGQHRTKIEE  2707
             I ++RT  EE
Sbjct  608   IQEQRTRAEE  617


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1831  DEGSLPK  1811
             DE  LPK
Sbjct  622   DEDVLPK  628


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7784  WFNITN  7801
             W NI N
Sbjct  637   WVNISN  642


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2725  EVGTY  2739
             EV TY
Sbjct  758   EVDTY  762


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4611  SSPAIC  4594
             S P IC
Sbjct  775   SPPTIC  780


>ref|NP_996808.1|  carbonic anhydrase 12 isoform 2 precursor [Homo sapiens]
Length=343

 GENE ID: 771 CA12 | carbonic anhydrase XII [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/10 (80%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -2

Query  6267  LMLVLILKEQ  6238
             L+LV ILKEQ
Sbjct  12    LLLV-ILKEQ  20


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 10/25 (40%)
 Frame = +3

Query  8859  MDDP---E-----REVLEWRFDSRL  8909
             MDDP   E     R+V    FD RL
Sbjct  262   MDDPSPREMINNFRQVQ--KFDERL  284


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -1

Query  5224  ME-PNPRKMSNSF  5189
             M+ P PR M N F
Sbjct  262   MDDPSPREMINNF  274


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3957  HIPGLQS  3937
             HI GLQS
Sbjct  105   HIQGLQS  111


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8346  PSYSKILS  8323
             PSY KI S
Sbjct  181   PSYDKIFS  188


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  870  LLLIMLK  850
            LLL+ LK
Sbjct  12   LLLVILK  18


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2570  LLVIL  2556
             LLVIL
Sbjct  13    LLVIL  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -3

Query  8975  ASSMS---AVLEVL  8943
             AS  S   AVL VL
Sbjct  160   ASNKSEGLAVLAVL  173


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  6830  GNNKTIIFK  6856
             G+NK +I+K
Sbjct  324   GDNKGVIYK  332


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  6002  DPNPQEVVLVNVTENF  6049
             DP P E  ++N   NF
Sbjct  264   DPSPRE--MIN---NF  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2142  IPGFN  2128
             +PGFN
Sbjct  202   VPGFN  206


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  588  LYCVH  602
            LYC H
Sbjct  257  LYCTH  261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7607  SWSNK  7621
             SWS K
Sbjct  42    SWSKK  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3769  FPDSST  3752
             +PD ST
Sbjct  154   YPDAST  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8609  LFKRK  8623
             LF RK
Sbjct  315   LFRRK  319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2420  VLLLI  2406
             VLLL+
Sbjct  11    VLLLV  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4326  ILKE  4337
             ILKE
Sbjct  16    ILKE  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             KQ+ LT
Sbjct  85    KQFLLT  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7843  ASYYHY  7826
             A YY Y
Sbjct  216   AEYYRY  221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  916  CPPTVFSMVF  887
            C PTV   VF
Sbjct  230  CNPTVLWTVF  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4595  VFHNP  4581
             VF NP
Sbjct  238   VFRNP  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6373  YTGLSKGI  6396
             YT  S GI
Sbjct  286   YTSFSQGI  293


>ref|NP_062558.1|  interferon-inducible GTPase 5 [Homo sapiens]
 sp|Q6NXR0.1|IIGP5_HUMAN  RecName: Full=Interferon-inducible GTPase 5; AltName: Full=Immunity-related 
GTPase cinema 1
 gb|AAC34467.1|  R30953_1 [Homo sapiens]
 gb|AAH66939.1|  Immunity-related GTPase family, cinema [Homo sapiens]
 gb|EAW57222.1|  immunity-related GTPase family, cinema, isoform CRA_b [Homo sapiens]
Length=463

 GENE ID: 56269 IRGC | immunity-related GTPase family, cinema [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  8927  PRAASGVLQELLTS  8968
             P AAS  LQELL S
Sbjct  37    PQAAS-HLQELLAS  49


 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1796  FPQVTLW  1816
             FP VTLW
Sbjct  104   FPDVTLW  110


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  3602  LGIIQAQP  3625
             LG+IQA P
Sbjct  274   LGVIQALP  281


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +3

Query  5802  GDGGGDGAP  5828
             G+GGG+ AP
Sbjct  429   GEGGGEEAP  437


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 38/66 (57%)
 Frame = +2

Query  8900  QPPSISSRGPRAASGVLQEL-------LTSSLLQGTFRWGLSREAWPGRDWGVASPQILH  9058
             Q PS    G R A  VLQE        L              REA      GVA P I  
Sbjct  180   QRPS----GFREAA-VLQEIRDHCAERL--------------REA------GVADPRI--  212

Query  9059  ISSCFL  9076
                 FL
Sbjct  213   ----FL  214


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  3462  PA---FPNLVS  3439
             PA   FP LVS
Sbjct  220   PARYDFPTLVS  230


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1480  ILGTKERL  1503
             IL  KERL
Sbjct  17    ILMAKERL  24


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 11/21 (52%)
 Frame = +3

Query  2097  PLA-------LLRLYQ*N*SQ  2138
             PLA        LRLY    SQ
Sbjct  333   PLANEVSPETVLRLY----SQ  349


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6393  YPLSQFP  6413
             YP  QFP
Sbjct  99    YPHPQFP  105


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2690  RTKIEE  2707
             RTK++E
Sbjct  167   RTKVDE  172


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  280  PLASCR  263
            PL  CR
Sbjct  437  PLSTCR  442


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  8883  TLLS------PGHPSHAG  8848
             TL S      P H  HAG
Sbjct  227   TLVSTWEHDLPSHRRHAG  244


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -2

Query  771  PDV-----PFA--PGCSA  739
            PDV     P A  PGC A
Sbjct  105  PDVTLWDLPGAGSPGCPA  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +1

Query  4708  DITM------KALIQE  4737
             DI +      KA+ QE
Sbjct  250   DISLEALQKKKAMLQE  265


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2730  GDLPH  2744
             GDLP+
Sbjct  34    GDLPQ  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +3

Query  4857  KKRY--STQVDPELA  4895
             KK Y   T VD +LA
Sbjct  161   KKFYFVRTKVDEDLA  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5120  EDQGPQRE  5143
             ED  PQ E
Sbjct  405   EDDEPQPE  412


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8879  SVRVEV  8896
             S+R EV
Sbjct  52    SIRLEV  57


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7430  NLLRAIEAQ  7456
             N LR  EA+
Sbjct  72    NALRGLEAE  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4386  IMSTILSPALYP  4351
             +M T + P  YP
Sbjct  89    VMETTMQPSPYP  100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6695  YGFFFL  6678
             Y FF L
Sbjct  134   YDFFLL  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = +2

Query  4016  SGYIEAEVIPAETGQE  4063
             SG+ EA V      QE
Sbjct  183   SGFREAAVL-----QE  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9009  SLESPQRK  8986
             SLE  Q K
Sbjct  252   SLEALQKK  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8045  DLRS  8056
             DLRS
Sbjct  325   DLRS  328


>ref|NP_077288.2|  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta 
precursor [Homo sapiens]
 sp|Q3T906.1|GNPTA_HUMAN  RecName: Full=N-acetylglucosamine-1-phosphotransferase subunits 
alpha/beta; AltName: Full=GlcNAc-1-phosphotransferase subunits 
alpha/beta; AltName: Full=Stealth protein GNPTAB; AltName: 
Full=UDP-N-acetylglucosamine-1-phosphotransferase subunits 
alpha/beta; Contains: RecName: Full=N-acetylglucosamine-1-phosphotransferase 
subunit alpha; Contains: RecName: Full=N-acetylglucosamine-1-phosphotransferase 
subunit beta; Flags: 
Precursor
Length=1256

 GENE ID: 79158 GNPTAB | N-acetylglucosamine-1-phosphate transferase, alpha and
beta subunits [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2321  DFRELNKRT  2347
             DF ELNK T
Sbjct  276   DFQELNKQT  284


 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  3680  EKVYLAW-VP  3706
             +KVYL W VP
Sbjct  427   QKVYLTWPVP  436


 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = +2

Query  3854  NLPPVVAKEIVASC----DK  3901
             NLPP V K  V  C    DK
Sbjct  1082  NLPP-VTKSLVTNCKPVTDK  1100


 Score = 21.0 bits (42),  Expect(2) =  1152
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 8/22 (36%)
 Frame = -1

Query  2353  VLSSLIKFSEIY*FSPFSTVFF  2288
             VL  LI F  I  FS     FF
Sbjct  1215  VLATLIMFT-I--FS-----FF  1228


 Score = 16.8 bits (32),  Expect(2) =  1152
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = -3

Query  2390  LRD---VVFLI----ELPR  2355
             LRD     F I    ELPR
Sbjct  1168  LRDFYESMFPIPSQFELPR  1186


 Score = 19.7 bits (39),  Expect(2) =  1773
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2647  HVLIDNY  2627
             HVL D Y
Sbjct  50    HVLFDSY  56


 Score = 17.2 bits (33),  Expect(2) =  1773
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2757  CFLSGVV  2737
             CFL  VV
Sbjct  23    CFLGVVV  29


 Score = 19.3 bits (38),  Expect(3) =  2327
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4622  SRQDED  4639
             S QDED
Sbjct  312   SKQDED  317


 Score = 17.6 bits (34),  Expect(3) =  2327
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  4394  DIQTKELQKQITK  4432
             D Q  EL KQ TK
Sbjct  276   DFQ--ELNKQ-TK  285


 Score = 16.8 bits (32),  Expect(3) =  2327
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4487  PAKLLW  4504
             PA LLW
Sbjct  299   PAYLLW  304


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  5162  LELLEELKNEAVR  5200
             LELL EL  + VR
Sbjct  87    LELLKEL--QQVR  97


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5949  HMIQRYIM  5972
             HMI R +M
Sbjct  959   HMIDRIVM  966


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  1640  EDLAFLQG  1663
             +DLAFL G
Sbjct  225   QDLAFLSG  232


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7621  ISGTDLE  7641
             + GTDLE
Sbjct  82    VNGTDLE  88


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 10/25 (40%)
 Frame = -1

Query  3949  WTTVYLSMHG--------FSF*LTF  3899
             W T+ L MH         F   LTF
Sbjct  595   WKTIHLIMHSGMNATTIHFN--LTF  617


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +1

Query  3268  AHTKGNMGNMVDRV  3309
             AH    M  M+DR+
Sbjct  955   AH----MPHMIDRI  964


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 14/31 (45%)
 Frame = -3

Query  3332  QESR--------W----LANTLSTMFPMFPF  3276
             QE R        W    LA TL  MF  F F
Sbjct  1199  QEWRAYRDKLKFWTHCVLA-TL-IMFTIFSF  1227


 Score = 17.2 bits (33),  Expect(2) =  5897
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6165  VHFKLT  6148
             +HF LT
Sbjct  611   IHFNLT  616


 Score = 17.2 bits (33),  Expect(2) =  5897
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6045  FSVTFTNT  6022
             F  TF NT
Sbjct  613   FNLTFQNT  620


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6482  PCTNVSTV  6505
             P TNVS V
Sbjct  176   PSTNVSVV  183


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7459  LLRLNSP  7439
             LL LN P
Sbjct  268   LLKLNNP  274


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6041  LSHLP  6027
             LSHLP
Sbjct  377   LSHLP  381


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 5/21 (23%)
 Frame = +3

Query  2106  LLRLYQ*N*SQEWMA-QKLNN  2165
             LL LY    S+   A  KLNN
Sbjct  257   LLQLY----SEASVALLKLNN  273


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5827  HAPW  5838
             HAPW
Sbjct  339   HAPW  342


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7394  WPVP  7383
             WPVP
Sbjct  433   WPVP  436


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1185  DIRQGPK  1205
             D R+GPK
Sbjct  634   DTREGPK  640


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4149  VAPVKLLP  4126
             V P+ LLP
Sbjct  653   VSPITLLP  660


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 12/27 (44%)
 Frame = -2

Query  4962  LIRPFL*QSLKNSQ----SN----TDE  4906
             L R F    L NSQ     N    TDE
Sbjct  735   LLRSF----LMNSQHAKIKNQAIITDE  757


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7893  LGRDIHHY  7916
             LGR  +HY
Sbjct  877   LGRKLQHY  884


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3047  YYDP  3058
             YYDP
Sbjct  1078  YYDP  1081


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  179   QWRPNRD-LK  205
             +WR  RD LK
Sbjct  1200  EWRAYRDKLK  1209


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3039  MECIMTH  3059
             +EC +TH
Sbjct  126   LECLLTH  132


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7900  LPNSIHY  7880
             LPN  HY
Sbjct  549   LPNQTHY  555


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  565  HYII  576
            HYII
Sbjct  554  HYII  557


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4847  RMEE  4858
             RMEE
Sbjct  861   RMEE  864


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2032  TYTC  2043
             TYTC
Sbjct  10    TYTC  13


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  224  PLVSLSL  204
            PLV  SL
Sbjct  696  PLVNISL  702


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  1502  NLSLVPKIASL  1470
             N SL PK A L
Sbjct  699   NISLLPKDAQL  709


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8834  QAGVLS  8817
             Q GVLS
Sbjct  1021  QSGVLS  1026


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4365  PALYP  4351
             P LYP
Sbjct  155   PSLYP  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1592  FLSTFP  1575
             FLS FP
Sbjct  229   FLSGFP  234


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2427  WVMHIF  2444
             WV  IF
Sbjct  342   WVRNIF  347


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6981  GQITLK  6998
             G ITLK
Sbjct  721   GDITLK  726


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4507  FPEE  4496
             FPEE
Sbjct  973   FPEE  976


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  205   SERETRGALST  237
             S+RE R  L T
Sbjct  1026  SDREIR-TLAT  1035


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3619  CLND  3608
             CLND
Sbjct  1149  CLND  1152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3684  FSFF  3673
             FSFF
Sbjct  1225  FSFF  1228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5908  LPHRY  5894
             L HRY
Sbjct  14    LSHRY  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1442  SNKFSYHND  1468
             S KF Y ND
Sbjct  399   SQKFIYLND  407


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8305  SRYVA  8291
             SRY+A
Sbjct  475   SRYIA  479


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  6566  AEEEVVIRSVN  6598
             A+EEV I  VN
Sbjct  689   AQEEVKIPLVN  699


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4591  SIIPNDL  4571
             SI PN L
Sbjct  773   SILPNSL  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7846  QASYY  7832
             Q SYY
Sbjct  1075  QESYY  1079


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5296  QNSYY  5282
             Q SYY
Sbjct  1075  QESYY  1079


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7168  DLQTWR  7185
             +LQ WR
Sbjct  1197  ELQEWR  1202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6987  ITLKE  7001
             ITLK+
Sbjct  149   ITLKD  153


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7733  FLAGF  7719
             FL GF
Sbjct  229   FLSGF  233


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 4/16 (25%)
 Frame = -1

Query  2359  PEVLSSLIK----FSE  2324
             PE LSS +K    +SE
Sbjct  248   PENLSSKVKLLQLYSE  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3048  IMTHQ  3062
             I THQ
Sbjct  367   IVTHQ  371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  669  YFCFA  655
            YF FA
Sbjct  565  YFSFA  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  9139  SL-VSQRAPRL  9110
             SL VS+R  RL
Sbjct  778   SLGVSERLQRL  788


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  54   SL-VSQRAPRL  25
            SL VS+R  RL
Sbjct  778  SLGVSERLQRL  788


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3996  RITFP  3982
             R TFP
Sbjct  787   RLTFP  791


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  289  QSPPL  275
            Q PPL
Sbjct  804  QNPPL  808


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6232  YLSFL  6218
             YL FL
Sbjct  888   YLGFL  892


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7544  AVDPLGI  7524
             AV PL I
Sbjct  1004  AVQPLNI  1010


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1215  RDYVDRF  1235
             R+Y +RF
Sbjct  1186  REYRNRF  1192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4386  IMSTILS  4366
             IM TI S
Sbjct  1220  IMFTIFS  1226


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4865  SLFPPF  4848
             SL+P F
Sbjct  156   SLYPSF  161


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3900  LSQLATIS  3877
             LS+L T S
Sbjct  377   LSHLPTFS  384


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7050  HMFIIC  7033
             HM I C
Sbjct  1052  HMLINC  1057


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2462  LHLREL  2445
             LH+ EL
Sbjct  1193  LHMHEL  1198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1718  ELQVW  1732
             ELQ W
Sbjct  1197  ELQEW  1201


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7113  FDEHLI  7096
             F E+LI
Sbjct  1228  FAEQLI  1233


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  5698  RKILRQRKI  5724
             RKI   R I
Sbjct  1237  RKIFPRRRI  1245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2663  GSDLE  2677
             G DLE
Sbjct  84    GTDLE  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +2

Query  5024  ILGTSSINNTKK  5059
             ILG      TKK
Sbjct  110   ILGKNTTEPTKK  121


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3690  IWHGY  3704
             +W GY
Sbjct  207   VWRGY  211


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6095  LYPHASV  6075
             LY  ASV
Sbjct  260   LYSEASV  266


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8213  LNATAI  8230
             +NAT I
Sbjct  606   MNATTI  611


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2213  EMEKEGKI  2236
             +M KE KI
Sbjct  845   QMTKEKKI  852


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             EL++M
Sbjct  968   ELQDM  972


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2366  ELPRSLE  2346
             ELP SL+
Sbjct  1039  ELPLSLQ  1045


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8831  LVTPCEP  8851
             LVT C P
Sbjct  1090  LVTNCKP  1096


>sp|P60507.1|EFC1_HUMAN  RecName: Full=HERV-F(c)1_Xq21.33 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein; AltName: Full=Fc1env; 
AltName: Full=HERV-Fc1env; Contains: RecName: Full=Surface 
protein; Short=SU; Contains: RecName: Full=Transmembrane 
protein; Short=TM; Flags: Precursor
Length=584


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = +2

Query  2765  EPPFLWMGYELHPDKWT  2815
             EPPF W  Y LH + WT
Sbjct  28    EPPFRWRFY-LH-ETWT  42


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1948  WRFY  1959
             WRFY
Sbjct  33    WRFY  36


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4611  SSPAICF  4591
             S P ICF
Sbjct  81    SNPTICF  87


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  4412  LQKQIT---KI--QN  4441
             LQ QIT   K+  QN
Sbjct  437   LQRQITSVAKVAMQN  451


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4790  CCYY  4779
             CCYY
Sbjct  473   CCYY  476


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2773  WRFFL  2759
             WRF+L
Sbjct  33    WRFYL  37


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  384  PIDLILPRLIL  352
            PI L+ PRL L
Sbjct  356  PISLV-PRLTL  365


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5776  SEGEISALV  5802
             SE E S LV
Sbjct  367   SEAELSSLV  375


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = -1

Query  7213  TSPIVPHISSSRSEDL  7166
             T  IV  ISS  S+DL
Sbjct  406   TGAIVHFISS--SQDL  419


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 20/38 (52%)
 Frame = -1

Query  7504  CLELLDAPDCELQ---------------QMLL----RL  7448
             CL LL AP C L                QMLL    RL
Sbjct  530   CLLLLIAP-CVLKFIKNRISEVSRVTVNQMLLHPYSRL  566


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9084  WVSLVR  9101
             W+ LVR
Sbjct  229   WITLVR  234


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7292  REKRAV  7309
             R+KRAV
Sbjct  380   RQKRAV  385


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1814  WQRPLVT  1834
             WQ PL T
Sbjct  511   WQSPLTT  517


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4847  YGDSLTQ  4827
             Y D LTQ
Sbjct  573   YDDALTQ  579


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8886  LTLLSP  8869
             LTLL P
Sbjct  13    LTLLTP  18


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2359  PEVLSSL  2339
             P+VLS L
Sbjct  183   PQVLSNL  189


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLL LL
Sbjct  11    LLLTLL  16


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8747  ISDPW  8733
             I DPW
Sbjct  143   IPDPW  147


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  3958  PYSWTTVYLSMHG  3920
             P+SW T  L  HG
Sbjct  226   PFSWIT--LVRHG  236


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  7796  LC*TNSTNLPIYLIP  7752
             LC      LPI L+P
Sbjct  353   LC------LPISLVP  361


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1775  QGTVSFNF  1798
             Q  V FNF
Sbjct  63    QAQVTFNF  70


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -3

Query  1511  TLN-NL----SLVP  1485
             TL  NL    SLVP
Sbjct  348   TLSRNLCLPISLVP  361


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6423  VPRLVL  6440
             VPRL L
Sbjct  360   VPRLTL  365


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8367  YFLT  8356
             YFLT
Sbjct  139   YFLT  142


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  7583  TTAVPWNASWSN  7618
             TT  P N SW N
Sbjct  305   TT--P-NSSWCN  313


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1773  LSAPA  1759
             LSAPA
Sbjct  323   LSAPA  327


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  1425  AEAMS----QVTNSATIMMQ  1472
             AE +     Q+T  A + MQ
Sbjct  431   AESLASLQRQITSVAKVAMQ  450


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5065  SHLCLVL  5085
             S LCL L
Sbjct  5     SPLCLLL  11


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3114  KFIK  3125
             KFIK
Sbjct  541   KFIK  544


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = +2

Query  4094  RWPVKTIHTD  4123
             RWP     TD
Sbjct  161   RWP-----TD  165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7795  YVKPIPQ  7775
             Y+  IPQ
Sbjct  178   YIRVIPQ  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/16 (37%), Positives = 6/16 (37%), Gaps = 7/16 (43%)
 Frame = -2

Query  3753  LTNLST-------CSF  3727
             L NLS        C F
Sbjct  320   LSNLSAPAGGYFWCNF  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5838  PRSMVPHL  5815
             P S+VP L
Sbjct  356   PISLVPRL  363


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQ RA
Sbjct  380   RQKRA  384


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -1

Query  6790  VIPFCSTNVTMCL  6752
             +IPF S     CL
Sbjct  519   IIPFISPILIICL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8404  DELSQQQ  8424
             D L QQ+
Sbjct  575   DALTQQE  581


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  4323  WMNTAIC  4303
             W N  IC
Sbjct  80    WSNPTIC  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  962  CRM  970
            CRM
Sbjct  112  CRM  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7568  QSNPK  7554
             QS PK
Sbjct  208   QSHPK  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1811  LWQRPLVTI  1837
             L Q PLV +
Sbjct  257   LSQPPLVAV  265


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2660  HTNHP  2646
             HT HP
Sbjct  277   HTAHP  281


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  4777  NLASPSG  4757
             NL  P G
Sbjct  322   NLSAPAG  328


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  140  SLVTRVT  120
            SLV R T
Sbjct  358  SLVPRLT  364


>emb|CAD88761.1|  immunoglobulin heavy chain [Homo sapiens]
Length=112


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8030  ALIWDD  8047
             ALIWDD
Sbjct  49    ALIWDD  54


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1451  FSYH  1462
             FSYH
Sbjct  29    FSYH  32


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  3952  SWTTVYLSM  3926
             S  T YL M
Sbjct  75    SRNTLYLQM  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  105  CARLLC  122
            CAR LC
Sbjct  96   CARDLC  101


>sp|P42830.1|CXCL5_HUMAN  RecName: Full=C-X-C motif chemokine 5; AltName: Full=Small-inducible 
cytokine B5; AltName: Full=Epithelial-derived neutrophil-activating 
protein 78; AltName: Full=Neutrophil-activating 
peptide ENA-78; AltName: Full=ENA-78(1-78); Contains: RecName: 
Full=ENA-78(8-78); Contains: RecName: Full=ENA-78(9-78); 
Flags: Precursor
Length=114

 GENE ID: 6374 CXCL5 | chemokine (C-X-C motif) ligand 5 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
 Frame = +2

Query  8900  QPPSISSRGPRAASGVLQEL  8959
             QP  I S GP AA  VL EL
Sbjct  30    QPGPIASAGPAAA--VLREL  47


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = -3

Query  2270  EYCMDFQAQFLK  2235
             E C+D +A FLK
Sbjct  89    EICLDPEAPFLK  100


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1539  LCALL  1525
             LCALL
Sbjct  18    LCALL  22


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 12/30 (40%)
 Frame = -2

Query  4842  RLPDPNASL-FLLYADPNMLLL------PI  4774
             R P P  SL  LL      LLL      PI
Sbjct  10    RVPGPSSSLCALL-----VLLLLLTQPGPI  34


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -2

Query  6285  SFCTLPLMLVLIL  6247
             S C L   LVL L
Sbjct  17    SLCAL---LVLLL  26


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1006  AIGPAC  989
             AIGP C
Sbjct  70    AIGPQC  75


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  514  ICLQP  500
            ICL P
Sbjct  90   ICLDP  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6765  LQCACL  6748
             L C CL
Sbjct  47    LRCVCL  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8045  DLRSLCL  8065
             +LR  CL
Sbjct  46    ELRCVCL  52


>ref|NP_005932.2|  matrix metalloproteinase-16 isoform 1 preproprotein [Homo sapiens]
Length=607

 GENE ID: 4325 MMP16 | matrix metallopeptidase 16 (membrane-inserted)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 18/30 (60%)
 Frame = +2

Query  2594  ILEPFRKQNPDIVIYQYM---------DDL  2656
             I+ PF         YQYM         DDL
Sbjct  263   IMAPF---------YQYMETDNFKLPNDDL  283


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  6844  NNL*AILRR  6870
             N L AILRR
Sbjct  348   NTL-AILRR  355


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4313  VFIHNFKRKG  4342
             VF   FKRKG
Sbjct  584   VF--QFKRKG  591


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7465  VATHSLGH  7488
             VA H LGH
Sbjct  243   VAVHELGH  250


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4174  RPPTG  4160
             RPPTG
Sbjct  327   RPPTG  331


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3995  LVAVH  4009
             LVAVH
Sbjct  242   LVAVH  246


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1689  RPEPTAPP  1712
             RP PT PP
Sbjct  301   RPLPTVPP  308


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  5696  YS--MITMD  5676
             YS  M TMD
Sbjct  462   YSEEMKTMD  470


 Score = 17.2 bits (33),  Expect(2) = 13559
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +3

Query  4302  YK----WQYSSTILK  4334
             YK    W +   ILK
Sbjct  502   YKGKEYWKFNNQILK  516


 Score = 15.9 bits (30),  Expect(2) = 13559
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4193  GIPYNPQ  4213
             GIP  PQ
Sbjct  482   GIPESPQ  488


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2423  DVGDAYF  2443
             DVG  YF
Sbjct  447   DVGKTYF  453


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2138  LALILLV  2118
             LAL LLV
Sbjct  573   LALCLLV  579


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6900  IVEGNFST  6923
             I +GNF T
Sbjct  342   ICDGNFNT  349


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4854  RKKRY  4868
             R KRY
Sbjct  116   RRKRY  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7886  NRVRQGY  7906
             NRV  GY
Sbjct  371   NRVMDGY  377


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5071  GGFIFF  5054
             G F+FF
Sbjct  401   GNFVFF  406


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  815  FYYFY  801
            F YFY
Sbjct  498  FTYFY  502


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3283  NMGNMVDR  3306
             NM   VDR
Sbjct  83    NMTGKVDR  90


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7057  FLPHVY  7040
             FL H Y
Sbjct  205   FLAHAY  210


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7327  PWVLG  7341
             PW LG
Sbjct  227   PWTLG  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = -3

Query  8030  PR-I----RSLIEWI  8001
             PR I    RS+ EW+
Sbjct  593   PRHILYCKRSMQEWV  607


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5383  PVDPRL  5400
             P DPR+
Sbjct  55    PTDPRM  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3979  RRKSY  3993
             RRK Y
Sbjct  116   RRKRY  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6663  DPTTI  6677
             DPT I
Sbjct  259   DPTAI  263


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9096  PERPSTG  9076
             P RP TG
Sbjct  325   PPRPPTG  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6456  IIRRSM  6473
             I RR M
Sbjct  352   ILRREM  357


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4665  VLLNFS  4648
             +LL FS
Sbjct  2     ILLTFS  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF L  LL
Sbjct  20    VFFLQTLL  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  1712  RRELQVW  1732
             RR   VW
Sbjct  153   RRAFDVW  159


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2619  FCFLKGSK  2596
             F F KG K
Sbjct  403   FVFFKGNK  410


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2954  KALTEVIP  2977
             KA   VIP
Sbjct  563   KAIAIVIP  570


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2620  ILFSKR  2603
             IL+ KR
Sbjct  596   ILYCKR  601


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  2136  QEW  2144
             QEW
Sbjct  604   QEW  606


>ref|NP_996890.1|  chemokine (C-C motif) ligand 4-like 2 precursor [Homo sapiens]
 ref|NP_001001435.1|  C-C motif chemokine 4-like precursor [Homo sapiens]
Length=92

 GENE ID: 388372 CCL4L2 | chemokine (C-C motif) ligand 4-like 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 12/32 (37%)
 Frame = -2

Query  6900  LKLCVTISGSPPEDCLKIIVLL--FPNCSLNL  6811
             +KLCVT+        L   VL   F  CSL L
Sbjct  1     MKLCVTV--------LSLLVLVAAF--CSLAL  22


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6745  YETSTL  6762
             YETS L
Sbjct  52    YETSSL  57


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = +1

Query  5419  GSQPKTACTNCYCKKCCF  5472
             GS P TA        CCF
Sbjct  27    GSDPPTA--------CCF  36


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  221  LV----SLSLSGP  195
            LV    SL LS P
Sbjct  13   LVAAFCSLALSAP  25


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -1

Query  1060  VLVVP----AMSLPLGS  1022
             VLV      A+S P+GS
Sbjct  12    VLVAAFCSLALSAPMGS  28


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -3

Query  5150  CVAPSVALGLLGLV  5109
             CV   V L LL LV
Sbjct  4     CV--TV-LSLLVLV  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6282  FCTLPL  6265
             FC L L
Sbjct  17    FCSLAL  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  331  ERWVRE  348
            E WV E
Sbjct  79   ESWVQE  84


>sp|P57075.1|UBS3A_HUMAN  RecName: Full=Ubiquitin-associated and SH3 domain-containing 
protein A; AltName: Full=Suppressor of T-cell receptor signaling 
2; Short=STS-2; AltName: Full=Cbl-interacting protein 4; 
Short=CLIP4; AltName: Full=T-cell ubiquitin ligand; Short=TULA
Length=661

 GENE ID: 53347 UBASH3A | ubiquitin associated and SH3 domain containing A
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  4644  TWKSLVKHHMY  4676
             TW   VKH MY
Sbjct  344   TW---VKHRMY  351


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  3252  VFPHITM  3232
             VFPH+T+
Sbjct  107   VFPHVTL  113


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  3335  WEFVNTPPLVK  3367
             WE VN PP VK
Sbjct  634   WELVN-PP-VK  642


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 11/24 (45%)
 Frame = +2

Query  5153  EWT----------LELLEELKNEA  5194
             EWT          L  LEELK EA
Sbjct  513   EWTKWEAGKTTPTLMSLEELK-EA  535


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  1230  RF--YKTLRA  1253
             RF  Y TLRA
Sbjct  274   RFVHYQTLRA  283


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  5144  PHNEWTLELL  5173
             PH + TLE L
Sbjct  243   PHHQRTLEQL  252


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1796  FPQVTL  1813
             FP+VTL
Sbjct  108   FPHVTL  113


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  283  PPLASC  266
            PPL SC
Sbjct  451  PPLSSC  456


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6070  HVIFPHV  6050
             H +FPHV
Sbjct  105   HEVFPHV  111


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5171  LEELKNE  5191
             LEELK E
Sbjct  494   LEELKLE  500


 Score = 18.5 bits (36),  Expect(2) =  7397
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1859  EALLDTG  1879
             +ALLD G
Sbjct  466   DALLDSG  472


 Score = 15.9 bits (30),  Expect(2) =  7397
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  1812  FGNDP--SS  1832
             F NDP  SS
Sbjct  447   FENDPPLSS  455


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  310  QNFWR  296
            Q FWR
Sbjct  89   QEFWR  93


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 11/26 (42%)
 Frame = +1

Query  3964  RLYTF-------RRKSYPG--SSSCS  4014
             R+YTF        RK   G  SS CS
Sbjct  349   RMYTFSLATDLNSRKD--GEASSRCS  372


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 2/17 (11%)
 Frame = +2

Query  6209  MIMEKGEIKNCSFNIST  6259
             M +E  E K   FNI T
Sbjct  527   MSLE--ELKEANFNIDT  541


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3112  SNLSRA  3129
             SNL RA
Sbjct  207   SNLTRA  212


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  6113  SLKPCVK---LT  6139
             S KPC K   LT
Sbjct  225   SVKPCTKQLHLT  236


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 6/24 (25%)
 Frame = -1

Query  7639  PNL-FQRFITPTSIPRHSSGANEF  7571
             P+L F     P S PR S G  +F
Sbjct  429   PDLNF-----PCSLPRRSRGIKDF  447


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2050  YVDRC  2036
             Y DRC
Sbjct  561   YMDRC  565


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  565  HYIIQ  579
            HYI Q
Sbjct  217  HYILQ  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = -2

Query  1671  LAFPC---RKAR  1645
             L FPC   R  R
Sbjct  431   LNFPCSLPRRSR  442


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3174  PTLM  3185
             PTLM
Sbjct  524   PTLM  527


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1648  GLPTRE  1665
             GLP RE
Sbjct  601   GLPPRE  606


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7816  YIPQPICYVKP  7784
             YI Q  C VKP
Sbjct  218   YILQKYCSVKP  228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8911  ARRLSNLH  8888
             AR LS L+
Sbjct  380   ARSLSSLQ  387


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5389  LLAPFLAL  5366
             LL P LA+
Sbjct  24    LLEPLLAM  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8667  YLVFFGS  8647
             YL FF S
Sbjct  156   YLGFFVS  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1800  LRSLF  1814
             LR LF
Sbjct  281   LRALF  285


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2053  NYVDR  2039
             NY DR
Sbjct  334   NYTDR  338


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  325  EGERWVRERQY  357
            E + WV  R Y
Sbjct  341  ESDTWVKHRMY  351


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6902  CGGEF  6916
             C GEF
Sbjct  371   CSGEF  375


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6284  EYAFF  6298
             EYA F
Sbjct  73    EYALF  77


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5856  VLQKNC  5873
             +LQK C
Sbjct  219   ILQKYC  224


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1074  FVPEGY  1057
             F PE Y
Sbjct  330   FLPENY  335


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4979  RANYVS  4962
             RA +VS
Sbjct  211   RASFVS  216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1253  RASF  1264
             RASF
Sbjct  211   RASF  214


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5288  RILQQL  5305
             R L+QL
Sbjct  247   RTLEQL  252


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2607  LENKI  2621
             LE KI
Sbjct  499   LEKKI  503


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  4054  CFC  4046
             CFC
Sbjct  623   CFC  625


>ref|NP_001209.1|  carbonic anhydrase 12 isoform 1 precursor [Homo sapiens]
 7 more sequence titles
 gb|AAC39789.1|  carbonic anhydrase XII precursor [Homo sapiens]
Length=354

 GENE ID: 771 CA12 | carbonic anhydrase XII [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/10 (80%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = -2

Query  6267  LMLVLILKEQ  6238
             L+LV ILKEQ
Sbjct  12    LLLV-ILKEQ  20


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 10/25 (40%)
 Frame = +3

Query  8859  MDDP---E-----REVLEWRFDSRL  8909
             MDDP   E     R+V    FD RL
Sbjct  262   MDDPSPREMINNFRQVQ--KFDERL  284


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -1

Query  5224  ME-PNPRKMSNSF  5189
             M+ P PR M N F
Sbjct  262   MDDPSPREMINNF  274


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3957  HIPGLQS  3937
             HI GLQS
Sbjct  105   HIQGLQS  111


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8346  PSYSKILS  8323
             PSY KI S
Sbjct  181   PSYDKIFS  188


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  870  LLLIMLK  850
            LLL+ LK
Sbjct  12   LLLVILK  18


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2570  LLVIL  2556
             LLVIL
Sbjct  13    LLVIL  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -3

Query  8975  ASSMS---AVLEVL  8943
             AS  S   AVL VL
Sbjct  160   ASNKSEGLAVLAVL  173


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  6830  GNNKTIIFK  6856
             G+NK +I+K
Sbjct  335   GDNKGVIYK  343


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  6002  DPNPQEVVLVNVTENF  6049
             DP P E  ++N   NF
Sbjct  264   DPSPRE--MIN---NF  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2142  IPGFN  2128
             +PGFN
Sbjct  202   VPGFN  206


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  588  LYCVH  602
            LYC H
Sbjct  257  LYCTH  261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7607  SWSNK  7621
             SWS K
Sbjct  42    SWSKK  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3769  FPDSST  3752
             +PD ST
Sbjct  154   YPDAST  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8609  LFKRK  8623
             LF RK
Sbjct  326   LFRRK  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2420  VLLLI  2406
             VLLL+
Sbjct  11    VLLLV  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4326  ILKE  4337
             ILKE
Sbjct  16    ILKE  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             KQ+ LT
Sbjct  85    KQFLLT  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7843  ASYYHY  7826
             A YY Y
Sbjct  216   AEYYRY  221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  916  CPPTVFSMVF  887
            C PTV   VF
Sbjct  230  CNPTVLWTVF  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4595  VFHNP  4581
             VF NP
Sbjct  238   VFRNP  242


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4219  LTLGIV  4202
             L LGI+
Sbjct  300   LSLGII  305


>ref|NP_003766.1|  sphingosine 1-phosphate receptor 4 precursor [Homo sapiens]
Length=384

 GENE ID: 8698 S1PR4 | sphingosine-1-phosphate receptor 4 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8521  HKRRRRWVF  8547
             H R RRWV+
Sbjct  74    HMRSRRWVY  82


 Score = 22.3 bits (45),  Expect =   731
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 17/36 (47%)
 Frame = -2

Query  7506  LAWSCLMPQTVSC--NRCCCASIAL---SK---LFC  7423
             L W CL      C  +R  C S  L   SK   LFC
Sbjct  182   LGWNCL------CAFDR--CSSL-LPLYSKRYILFC  208


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3200  LIVLH  3186
             LIVLH
Sbjct  24    LIVLH  28


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1703  CWLWSAL  1683
             CWL  AL
Sbjct  169   CWLLAAL  175


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5961  RYIMF  5975
             RYI+F
Sbjct  203   RYILF  207


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  6094  YILMHLFYHVIF  6059
             YIL   F  VIF
Sbjct  204   YIL---FCLVIF  212


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = +1

Query  8335  AI-RWV-ASGQK  8364
             AI R V ASGQK
Sbjct  225   AIFRLVQASGQK  236


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = -2

Query  4581  LMIFAFLLGTTFMSL  4537
             L IFA  L  T M L
Sbjct  209   LVIFAGVL-ATIMGL  222


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8428  LSAAGSARLI  8399
             L A G  RLI
Sbjct  16    LAAGGHSRLI  25


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3035  LVLLESL  3015
             LV LE L
Sbjct  59    LVVLENL  65


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  452  GARTIR  469
            GART R
Sbjct  107  GARTFR  112


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8133  LRPRSS  8116
             LRPR S
Sbjct  355   LRPRDS  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3564  PESC  3553
             PESC
Sbjct  10    PESC  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8311  YSSRYV  8294
             YS RY+
Sbjct  200   YSKRYI  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1656  RKARSSLK  1633
             RKAR  LK
Sbjct  244   RKARRLLK  251


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  7433  LLRAIEAQ  7456
             L RA+EA+
Sbjct  338   LARAVEAH  345


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -3

Query  2594  FLSCY---FGILL  2565
             FL C    FG LL
Sbjct  260   FLVCWGPLFGLLL  272


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4355  YSAGER  4372
             + AGER
Sbjct  138   FTAGER  143


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1223  CRPVL  1237
             CR VL
Sbjct  315   CRAVL  319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2546  VEAH  2535
             VEAH
Sbjct  342   VEAH  345


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2666  ILHTNH  2649
             +LH NH
Sbjct  26    VLHYNH  31


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1561  LGALQFLAV  1535
             LGAL  L V
Sbjct  46    LGALRGLSV  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8600  IYSCLV  8583
             +Y CLV
Sbjct  81    VYYCLV  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1631  FFREDLAF  1654
             F RE L F
Sbjct  119   FLREGLLF  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5548  LFVAVSAS  5525
             LF A  AS
Sbjct  125   LFTALAAS  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1610  IFHLV  1596
             IF LV
Sbjct  226   IFRLV  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4559  RRKA  4570
             RRKA
Sbjct  243   RRKA  246


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4474  WISAVPVIN  4448
             WI A  V N
Sbjct  291   WILALAVLN  299


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6618  VLALSV  6601
             +LAL V
Sbjct  292   ILALAV  297


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8825  VLSF  8814
             VLSF
Sbjct  318   VLSF  321


>sp|Q9BZM6.1|N2DL1_HUMAN  RecName: Full=NKG2D ligand 1; Short=NKG2DL1; Short=N2DL-1; AltName: 
Full=UL16-binding protein 1; AltName: Full=ALCAN-beta; 
AltName: Full=Retinoic acid early transcript 1I; Flags: Precursor
Length=244

 GENE ID: 80329 ULBP1 | UL16 binding protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -3

Query  2393  TLRDVV-FL  2370
             TLRDVV FL
Sbjct  93    TLRDVVDFL  101


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7857  LKPTKPP  7837
             L PTKPP
Sbjct  205   LDPTKPP  211


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  485  QARINCE  465
            QAR  CE
Sbjct  122  QARMSCE  128


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2808  LSGWS  2794
             LSGWS
Sbjct  19    LSGWS  23


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4383  MSTILSP  4363
             M T LSP
Sbjct  223   MATTLSP  229


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  3823  VIFLMFIL  3800
             +IFL FIL
Sbjct  234   IIFLCFIL  241


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6223  FLHY  6212
             FLHY
Sbjct  61    FLHY  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8775  LVPVEP  8792
             L+P+EP
Sbjct  113   LIPIEP  118


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -2

Query  621  LLSLSFDAHNR  589
            LL   FD  NR
Sbjct  149  LL---FDSNNR  156


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TP SRP
Sbjct  40    TPKSRP  45


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7379  LTVQAR  7396
             LT QAR
Sbjct  119   LTLQAR  124


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1939  RGNWRF  1956
             RG W F
Sbjct  136   RGSWQF  141


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  55  THCL  66
           THCL
Sbjct  30  THCL  33


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  9140  THCL  9151
             THCL
Sbjct  30    THCL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8077  PLERLTL  8097
             P E LTL
Sbjct  115   PIEPLTL  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8232  AMAVALS  8212
             AMA  LS
Sbjct  222   AMATTLS  228


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  396  LRPGGKK  416
            L PG KK
Sbjct  161  LHPGAKK  167


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8340  KMGGKWSK  8363
             KM  KW K
Sbjct  167   KMTEKWEK  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3242  ILLCF  3228
             I LCF
Sbjct  235   IFLCF  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8168  LQYWSQ  8185
             L YW Q
Sbjct  198   LMYWEQ  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4210  PKSR  4221
             PKSR
Sbjct  41    PKSR  44


>ref|NP_004075.1|  neutrophil defensin 1 preproprotein [Homo sapiens]
Length=94

 GENE ID: 1667 DEFA1 | defensin, alpha 1 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 5/22 (22%)
 Frame = +2

Query  6074  EQMHEDI----ISL-WDQSLKP  6124
             EQ   DI    +SL WD+SL P
Sbjct  34    EQIAADIPEVVVSLAWDESLAP  55


 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
 Frame = +1

Query  5398  LEPWKHPGSQPKTACTNCYC  5457
             L P KHPGS    A   CYC
Sbjct  53    LAP-KHPGSRKNMA---CYC  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6279  RKNM  6290
             RKNM
Sbjct  61    RKNM  64


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  584  CYCII  570
            CYC I
Sbjct  66   CYCRI  70


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2554  ERITSNIP  2577
             E I  +IP
Sbjct  34    EQIAADIP  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5348  RRYST  5362
             RRY T
Sbjct  78    RRYGT  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2494  RYGKC  2480
             RYG C
Sbjct  79    RYGTC  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +3

Query  8514  LEAQEE------EEV  8540
             L+AQ E      +EV
Sbjct  15    LQAQAEPLQARADEV  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7417  AAAEQFA  7437
             AA EQ A
Sbjct  31    AAPEQIA  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4389  AIMSTIL  4369
             AI+  IL
Sbjct  5     AILAAIL  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4385  IATDI  4399
             IA DI
Sbjct  36    IAADI  40


>ref|NP_110403.2|  Z-DNA-binding protein 1 isoform a [Homo sapiens]
Length=429

 GENE ID: 81030 ZBP1 | Z-DNA binding protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEWTLE  5167
             M QAP D G  RE H    LE
Sbjct  1     MAQAPADPG--REGH----LE  15


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 9/25 (36%)
 Frame = -1

Query  5842  HPKE---HGAPS------PPPSPQV  5795
             H  E   HG PS      PP SP V
Sbjct  268   HSNEMRLHGVPSEGPAHIPPGSPPV  292


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1269  PVKLARL  1249
             PVKLA L
Sbjct  28    PVKLAQL  34


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4235  MNKELK  4252
             M KELK
Sbjct  52    MKKELK  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6687  ESVSRED  6707
             + VSRED
Sbjct  217   QTVSRED  223


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  8998  SPAESPL*QARCQQ  8957
             SPAE P      QQ
Sbjct  85    SPAERP------QQ  92


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5752  RAEDSG  5769
             R EDSG
Sbjct  166   RPEDSG  171


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2294  DSTKWRKLVD  2323
             DS  W  LVD
Sbjct  238   DSSTWGTLVD  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = -1

Query  1405  PGPPTP*HAVIISSSVAAGPNA  1340
             PG P P   V   S  AAGP A
Sbjct  287   PGSP-P---V---SATAAGPEA  301


 Score = 16.3 bits (31),  Expect(2) = 32467
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LLD  EQ
Sbjct  152   LLDMDEQ  158


 Score = 15.1 bits (28),  Expect(2) = 32467
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5363  EESKKW  5380
             E+SK W
Sbjct  157   EQSKAW  162


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7523  RYLKD  7537
             R+LKD
Sbjct  115   RFLKD  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6507  NVHME  6521
             ++HME
Sbjct  253   DIHME  257


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/24 (41%), Positives = 10/24 (41%), Gaps = 8/24 (33%)
 Frame = -1

Query  7486  APDCELQQMLLR--------LNSP  7439
             AP  EL Q L R        L SP
Sbjct  40    APKRELNQVLYRMKKELKVSLTSP  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  3147  VFRFL--NG  3127
             ++RFL  NG
Sbjct  113   IYRFLKDNG  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6962  STWST  6976
             STW T
Sbjct  240   STWGT  244


 Score = 15.5 bits (29),  Expect(2) = 46233
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1419  VLAEAMSQV  1445
             VL EA S V
Sbjct  21    VLTEAGSPV  29


 Score = 15.1 bits (28),  Expect(2) = 46233
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  1531  GTQPEIAGP  1557
             GT PE  GP
Sbjct  70    GTDPEGEGP  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7195  EGQLE  7209
             EG+LE
Sbjct  11    EGHLE  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2716  LSQLLY  2699
             L Q LY
Sbjct  45    LNQVLY  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7386  YRPDN  7400
             YRP++
Sbjct  165   YRPED  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4607  HLPS  4596
             HLPS
Sbjct  230   HLPS  233


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8428  GWEQHLE  8448
             G E HLE
Sbjct  9     GREGHLE  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +1

Query  1546  IAGPLGKRAVGNVER  1590
             IA  LG R   +V R
Sbjct  128   IAQALGMRTAKDVNR  142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  284  AAPRLLP  264
            A PR LP
Sbjct  226  AGPRHLP  232


>ref|NP_112477.1|  C-C chemokine receptor type 9 isoform A [Homo sapiens]
Length=369

 GENE ID: 10803 CCR9 | chemokine (C-C motif) receptor 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = -1

Query  6685  FSCIVVGS-CTINFYRCVQL  6629
             F C VV S    NFY CV L
Sbjct  117   FMCKVVNSMYKMNFYSCVLL  136


 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6399  LSQFPY  6416
             LSQFPY
Sbjct  265   LSQFPY  270


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = -3

Query  1343  CF*NSLTIWV  1314
             CF    TIWV
Sbjct  169   CF----TIWV  174


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7682  YTSLIHSLI  7708
             YT  IH LI
Sbjct  234   YTIIIHTLI  242


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  450  CL-PILYV  430
            CL P+LYV
Sbjct  311  CLNPVLYV  318


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  4761  LGDARLVITTYW  4796
             LG+  LVI  YW
Sbjct  64    LGNS-LVILVYW  74


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = +3

Query  4623  VDR-------MRIRTW  4649
             VDR       MR  TW
Sbjct  142   VDRYIAIAQAMRAHTW  157


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1284  SNFLPP  1267
             S FLPP
Sbjct  48    SHFLPP  53


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2653  IIHVLI  2636
             IIH LI
Sbjct  237   IIHTLI  242


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2129  ILLVQ  2115
             ILLVQ
Sbjct  273   ILLVQ  277


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -2

Query  3603  NAYCESVTMFTSN  3565
             +AY     MF SN
Sbjct  280   DAY----AMFISN  288


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4073  FLLKLA  4090
             FLL LA
Sbjct  86    FLLNLA  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7631  VPEIYYS  7611
             +PEI YS
Sbjct  181   IPEILYS  187


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 11/29 (37%)
 Frame = -1

Query  5203  MSNSFILK-----LL*KL*CPFIVWLPLW  5132
             M + F L      LL      F V LP W
Sbjct  82    MTDMFLLNLAIADLL------FLVTLPFW  104


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 6/12 (50%)
 Frame = -3

Query  4337  FF*NCG*ILPFV  4302
             FF      LPFV
Sbjct  223   FF------LPFV  228


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  108  HTLLEALKAS  79
            HTL +A K S
Sbjct  239  HTLIQAKKSS  248


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1784  VSFNF  1798
             V FNF
Sbjct  29    VNFNF  33


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2133  FNFT  2122
             FNFT
Sbjct  31    FNFT  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6226  RDKKLLF  6246
             R+K LL+
Sbjct  158   REKRLLY  164


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4311  AICTAV  4294
             AICT V
Sbjct  196   AICTMV  201


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8087  DLLLIVT  8107
             DLL  VT
Sbjct  94    DLLFLVT  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VV SM K
Sbjct  121   VVNSMYK  127


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4178  IKQEFGI  4198
             IK+E GI
Sbjct  189   IKEESGI  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = -2

Query  6804  ICFKV-----LFH  6781
             ICF V      FH
Sbjct  297   ICFQVTQTIAFFH  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  4666  CFTKLFHVLI  4637
             C+T   H LI
Sbjct  233   CYTIIIHTLI  242


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -2

Query  1050  FLLCHFP----LVLSSGLVQ  1003
             F L +FP    L     LVQ
Sbjct  263   FVLSQFPYNCIL-----LVQ  277


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  949  MVSFNI  932
            MV F I
Sbjct  167  MVCFTI  172


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4621  CHTII  4607
             C TII
Sbjct  233   CYTII  237


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4371  LSPALY  4354
             L P LY
Sbjct  312   LNPVLY  317


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5755  AEDSGNES  5778
             A+D G ES
Sbjct  14    ADDYGSES  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1296  LLVQ  1307
             LLVQ
Sbjct  274   LLVQ  277


>ref|NP_006632.2|  C-C chemokine receptor type 9 isoform B [Homo sapiens]
Length=357

 GENE ID: 10803 CCR9 | chemokine (C-C motif) receptor 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
 Frame = -1

Query  6685  FSCIVVGS-CTINFYRCVQL  6629
             F C VV S    NFY CV L
Sbjct  105   FMCKVVNSMYKMNFYSCVLL  124


 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6399  LSQFPY  6416
             LSQFPY
Sbjct  253   LSQFPY  258


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = -3

Query  1343  CF*NSLTIWV  1314
             CF    TIWV
Sbjct  157   CF----TIWV  162


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7682  YTSLIHSLI  7708
             YT  IH LI
Sbjct  222   YTIIIHTLI  230


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  450  CL-PILYV  430
            CL P+LYV
Sbjct  299  CLNPVLYV  306


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  4761  LGDARLVITTYW  4796
             LG+  LVI  YW
Sbjct  52    LGNS-LVILVYW  62


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = +3

Query  4623  VDR-------MRIRTW  4649
             VDR       MR  TW
Sbjct  130   VDRYIAIAQAMRAHTW  145


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1284  SNFLPP  1267
             S FLPP
Sbjct  36    SHFLPP  41


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2653  IIHVLI  2636
             IIH LI
Sbjct  225   IIHTLI  230


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2129  ILLVQ  2115
             ILLVQ
Sbjct  261   ILLVQ  265


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -2

Query  3603  NAYCESVTMFTSN  3565
             +AY     MF SN
Sbjct  268   DAY----AMFISN  276


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4073  FLLKLA  4090
             FLL LA
Sbjct  74    FLLNLA  79


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7631  VPEIYYS  7611
             +PEI YS
Sbjct  169   IPEILYS  175


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 11/29 (37%)
 Frame = -1

Query  5203  MSNSFILK-----LL*KL*CPFIVWLPLW  5132
             M + F L      LL      F V LP W
Sbjct  70    MTDMFLLNLAIADLL------FLVTLPFW  92


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 6/12 (50%)
 Frame = -3

Query  4337  FF*NCG*ILPFV  4302
             FF      LPFV
Sbjct  211   FF------LPFV  216


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  108  HTLLEALKAS  79
            HTL +A K S
Sbjct  227  HTLIQAKKSS  236


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1784  VSFNF  1798
             V FNF
Sbjct  17    VNFNF  21


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2133  FNFT  2122
             FNFT
Sbjct  19    FNFT  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6226  RDKKLLF  6246
             R+K LL+
Sbjct  146   REKRLLY  152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4311  AICTAV  4294
             AICT V
Sbjct  184   AICTMV  189


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8087  DLLLIVT  8107
             DLL  VT
Sbjct  82    DLLFLVT  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VV SM K
Sbjct  109   VVNSMYK  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4178  IKQEFGI  4198
             IK+E GI
Sbjct  177   IKEESGI  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = -2

Query  6804  ICFKV-----LFH  6781
             ICF V      FH
Sbjct  285   ICFQVTQTIAFFH  297


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  4666  CFTKLFHVLI  4637
             C+T   H LI
Sbjct  221   CYTIIIHTLI  230


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -2

Query  1050  FLLCHFP----LVLSSGLVQ  1003
             F L +FP    L     LVQ
Sbjct  251   FVLSQFPYNCIL-----LVQ  265


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  949  MVSFNI  932
            MV F I
Sbjct  155  MVCFTI  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4621  CHTII  4607
             C TII
Sbjct  221   CYTII  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4371  LSPALY  4354
             L P LY
Sbjct  300   LNPVLY  305


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5755  AEDSGNES  5778
             A+D G ES
Sbjct  2     ADDYGSES  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1296  LLVQ  1307
             LLVQ
Sbjct  262   LLVQ  265


>ref|NP_005726.1|  beta-centractin [Homo sapiens]
Length=376

 GENE ID: 10120 ACTR1B | ARP1 actin-related protein 1 homolog B, centractin beta
(yeast) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8806  RPIKERTPACY  8838
             R IKER  ACY
Sbjct  215   RTIKER--ACY  223


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = -2

Query  3786  PSKNS---------TFLIPAL  3751
             PSKN          TF +PAL
Sbjct  117   PSKNREKAAEVFFETFNVPAL  137


 Score = 18.0 bits (35),  Expect(2) =  3839
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  537  LQTGSEE  557
            LQT SEE
Sbjct  99   LQTFSEE  105


 Score = 18.0 bits (35),  Expect(2) =  3839
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = +2

Query  584  NPLLCASKDRDK  619
            NP    SK+R+K
Sbjct  116  NP----SKNREK  123


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2426  HPVLL  2412
             HPVLL
Sbjct  106   HPVLL  110


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1598  PNERLY  1615
             P ERLY
Sbjct  333   PQERLY  338


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5767  GNESEG  5784
             G+ESEG
Sbjct  269   GDESEG  274


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2822  AVLSIY  2805
             AVLS Y
Sbjct  143   AVLSLY  148


 Score = 16.8 bits (32),  Expect(2) = 16177
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2617  KSRHSYLSI  2643
             K R  YLSI
Sbjct  218   KERACYLSI  226


 Score = 16.3 bits (31),  Expect(2) = 16177
 Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 14/33 (42%)
 Frame = +2

Query  2417  VLDVGD----AYFSVPLDEDFRKYTAFTIP-SI  2500
             VLD GD    A   VP       Y  F  P SI
Sbjct  157   VLDSGDGVTHA---VPI------YEGFAMPHSI  180


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1190  YVQNAGRAIH  1161
             Y ++  RAIH
Sbjct  363   YEEDGSRAIH  372


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8452  WKNME  8466
             W +ME
Sbjct  83    WNDME  87


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8969  SMSAVL  8952
             SM AVL
Sbjct  140   SMQAVL  145


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3240  YGERLL  3257
             +G+RLL
Sbjct  310   FGDRLL  315


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1650  PSYKGRP  1670
             P Y GRP
Sbjct  36    PNYVGRP  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  734  YSAEHP  751
            +S EHP
Sbjct  102  FSEEHP  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2053  NYVDR  2039
             NYV R
Sbjct  37    NYVGR  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1803  RSLFGN  1820
             R LF N
Sbjct  292   RTLFAN  297


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5839  PKEHG  5825
             P EHG
Sbjct  74    PMEHG  78


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4587  MENRWQ  4604
             ME  WQ
Sbjct  86    MERIWQ  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5342  QNRRYST  5362
             Q R YST
Sbjct  334   QERLYST  340


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7030  YSAWEG  7013
             YS W G
Sbjct  338   YSTWIG  343


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8443  LETWKNM  8463
             L+T K M
Sbjct  350   LDTFKKM  356


>ref|NP_004933.1|  beta-defensin 4A precursor [Homo sapiens]
Length=64

 GENE ID: 1673 DEFB4A | defensin, beta 4A [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 4/21 (19%)
 Frame = -3

Query  2420  VLLLIFSFLTLRDVVFLIELP  2358
             VL L FSFL     +FL  LP
Sbjct  3     VLYLLFSFL----FIFLMPLP  19


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  3167  SFLHIFLFSDF*MAL  3123
             SFL IFL     M L
Sbjct  9     SFLFIFL-----MPL  18


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7074  MPLPSV  7091
             MPLP V
Sbjct  16    MPLPGV  21


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1289  CHPIF  1275
             CHP+F
Sbjct  38    CHPVF  42


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4873  VLYLFF  4856
             VLYL F
Sbjct  3     VLYLLF  8


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 18/40 (45%)
 Frame = +2

Query  1904  MSLPGRWKPKMIGGIG--------GFI--KV---RQYDQI  1984
             M LPG       GGIG        G I   V   R Y QI
Sbjct  16    MPLPG-----VFGGIGDPVTCLKSGAICHPVFCPRRYKQI  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/10 (40%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  1167  YTFLLFYLIP  1138
             + FL  +L P
Sbjct  8     FSFLFIFLMP  17


>ref|NP_061167.1|  lanC-like protein 2 [Homo sapiens]
Length=450

 GENE ID: 55915 LANCL2 | LanC lantibiotic synthetase component C-like 2
(bacterial) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = +2

Query  3908  LKGEAMHGQVDCSPGIWQ  3961
             LK EAM    +CS  IWQ
Sbjct  344   LK-EAM----ECSDVIWQ  356


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  3635  ES---ELVNQIIE  3664
             ES   E VN IIE
Sbjct  221   ESAIKEVVNAIIE  233


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = -2

Query  2508  SLFILGMVNAVYFL  2467
             SLF  GM  A+ FL
Sbjct  416   SLFE-GMAGAIHFL  428


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5365  GEQEME  5382
             GE EME
Sbjct  15    GEAEME  20


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2541  FHRDGK  2558
             FH DGK
Sbjct  63    FHQDGK  68


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 5/22 (22%)
 Frame = -3

Query  3695  PDRPFPflltallfd*ltLIHF  3630
             PDRP+              IHF
Sbjct  411   PDRPYSLFEGMAGA-----IHF  427


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8072  YHRLR  8086
             YH LR
Sbjct  162   YHKLR  166


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7520  ERYLKD  7537
             E YLK+
Sbjct  341   EKYLKE  346


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  813  EEKAF  827
            EE AF
Sbjct  20   EERAF  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1209  PFRDY  1223
             PF DY
Sbjct  27    PFPDY  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  438  LYVLIY  421
            LY L Y
Sbjct  204  LYALLY  209


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 6/22 (27%)
 Frame = +2

Query  6989  NTE-GSDTITLPC--RIKQIIN  7045
             NTE G  T+   C   IK+++N
Sbjct  211   NTEIGPGTV---CESAIKEVVN  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1435  IASAKTL  1415
             I S KTL
Sbjct  232   IESGKTL  238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2925  GNYVNSL  2945
             GNY  SL
Sbjct  304   GNYPSSL  310


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2405  FSFLTL  2388
             +SFL L
Sbjct  375   YSFLSL  380


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4503  QRSFAGPF  4480
             +R F  PF
Sbjct  21    ERAFVNPF  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  1862  ALLDTG-ADDT  1891
             ALL  G A++T
Sbjct  37    ALLASGAAEET  47


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  694  LTQD  705
            LTQD
Sbjct  383  LTQD  386


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8675  IKDIL  8661
             IKD L
Sbjct  81    IKDLL  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3976  FRRKSYPGS  4002
             FR   YP S
Sbjct  301   FRSGNYPSS  309


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1789  GYSSLS  1772
             GYS LS
Sbjct  374   GYSFLS  379


>ref|NP_001174.2|  V-type proton ATPase subunit S1 precursor [Homo sapiens]
Length=470

 GENE ID: 537 ATP6AP1 | ATPase, H+ transporting, lysosomal accessory protein 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 6/24 (25%)
 Frame = -3

Query  2462  LH-----LRELKNMHHPHPVLLLI  2406
             LH     LRELK +    P LLLI
Sbjct  157   LHVDLATLRELK-LNASLPALLLI  179


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = +2

Query  3938  DC----SPGIW  3958
             DC    SPGIW
Sbjct  417   DCASFFSPGIW  427


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4436  QNFRVYYRD  4462
             QNF V Y D
Sbjct  272   QNFSVAYKD  280


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4848  LWRLP  4834
             LWR+P
Sbjct  20    LWRMP  24


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5874  HNFSVA  5857
             +NFSVA
Sbjct  272   QNFSVA  277


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2031  DLHLST  2048
             DL+LST
Sbjct  71    DLQLST  76


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  3774  STFLIPAL  3751
             ST+L PAL
Sbjct  75    STYLDPAL  82


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7417  AAAEQ  7431
             AAAEQ
Sbjct  39    AAAEQ  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            L PSSL
Sbjct  126  LAPSSL  131


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  9104  WSNQRD  9087
             WS  RD
Sbjct  50    WSSDRD  55


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  19  WSNQRD  2
           WS  RD
Sbjct  50  WSSDRD  55


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8295  TYLEE  8309
             TYL+E
Sbjct  146   TYLQE  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1924  PSSWQ  1910
             PS WQ
Sbjct  390   PSPWQ  394


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  516  VFVYSLLMFL  487
            +F Y L M L
Sbjct  439  IFTYGLHMIL  448


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +2

Query  8738  GQISTDLWMVLQAST  8782
             G+I  D    LQ ST
Sbjct  66    GHITSD----LQLST  76


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4383  MSTILSPAL  4357
             +ST L PAL
Sbjct  74    LSTYLDPAL  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4821  SLFLLY  4804
             SLF+L+
Sbjct  433   SLFMLF  438


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2310  LHLVLS  2293
             LH++LS
Sbjct  444   LHMILS  449


 Score = 15.9 bits (30),  Expect(2) = 37286
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -3

Query  290  PVA----APRLL  267
            PV     APR L
Sbjct  257  PVSYNDTAPRIL  268


 Score = 15.1 bits (28),  Expect(2) = 37286
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  294  LTSRRPS  274
            LT  RPS
Sbjct  221  LTAVRPS  227


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +1

Query  8026  LGTYLGRSAEPVPLQLPP  8079
             L TYL    +P  L+L P
Sbjct  74    LSTYL----DP-ALELGP  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3459  QDMLLIEE  3482
             QD L IE+
Sbjct  94    QDKLSIED  101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  728  LPYSA  742
            LPY A
Sbjct  181  LPYTA  185


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  7518  TA-RILAW  7498
             TA RIL W
Sbjct  263   TAPRILFW  270


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1781  TVSFNF  1798
             TV F F
Sbjct  320   TVTFKF  325


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  799  HAFKVLGD  776
            +AF V+G+
Sbjct  403  QAFNVMGE  410


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8471  DCSMFF  8454
             DC  FF
Sbjct  417   DCASFF  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  3459  AFPNLVSLLA-APS  3421
             AF NL   L  APS
Sbjct  116   AFSNLENALDLAPS  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  976  LSHSAASSLM  947
            L   A S LM
Sbjct  181  LPYTASSGLM  190


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5305  QLLQ  5294
             QLLQ
Sbjct  243   QLLQ  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  9082  TGSLWLD  9102
             TGS W D
Sbjct  298   TGSFWND  304


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3955  MATRLY  3972
             +A RLY
Sbjct  327   LANRLY  332


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2931  YVNSL  2945
             YV SL
Sbjct  373   YVSSL  377


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  415  FFPPG  401
            FF PG
Sbjct  421  FFSPG  425


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8208  LTALF  8194
             LT LF
Sbjct  431   LTSLF  435


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8956  TADIELAT  8979
             T D +L T
Sbjct  69    TSDLQLST  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -1

Query  2356  EVLSSLIKFSE  2324
             +VLS L K SE
Sbjct  205   QVLSTL-K-SE  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  1718  LFW  1710
             LFW
Sbjct  268   LFW  270


>ref|NP_055679.1|  glycosaminoglycan xylosylkinase precursor [Homo sapiens]
Length=409

 GENE ID: 9917 FAM20B | family with sequence similarity 20, member B
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.4 bits (50),  Expect =   168
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4707  RHHYES  4724
             RHHYES
Sbjct  290   RHHYES  295


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
 Frame = -3

Query  2420  VLLLIFSFLTLRDVVFLIE  2364
             +LL IF F      VFLI+
Sbjct  12    ILLVIFIFTK----VFLID  26


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +2

Query  4355  YSAGERIVDIIAT  4393
             Y  G R  DII T
Sbjct  266   YDSGPRLLDIIDT  278


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4125  MA--AISPVL  4148
             MA   ISPVL
Sbjct  358   MAHDPISPVL  367


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8193  RIVLLA  8210
             R+VLLA
Sbjct  6     RVVLLA  11


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2573  ILLVI  2559
             ILLVI
Sbjct  12    ILLVI  16


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6521  IRPVVSTQLL  6550
             I PV   QLL
Sbjct  176   IKPVATEQLL  185


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  959  FLIDGL  942
            FLID L
Sbjct  23   FLIDNL  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  759  MVHQAISP  782
            M H  ISP
Sbjct  358  MAHDPISP  365


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1495  ERLLSV  1512
             +RLLSV
Sbjct  377   QRLLSV  382


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = -2

Query  495  MFLTGQD*LRIVLAP  451
            M +TG   LR+ LAP
Sbjct  44   M-MTG---LRVELAP  54


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8356  GQKVV  8370
             GQKVV
Sbjct  117   GQKVV  121


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  366  GELDRWE  386
            G L RWE
Sbjct  245  GKLARWE  251


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7651  LDGVGQR  7671
             LD V QR
Sbjct  372   LDAVDQR  378


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8922  VARELHPE  8945
             V RE  PE
Sbjct  72    VPREVYPE  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5193  LLDI  5204
             LLDI
Sbjct  272   LLDI  275


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  6557  HLTAVELILL  6528
             HL AV+  LL
Sbjct  371   HLDAVDQRLL  380


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2573  ILLVIL  2556
             +LL IL
Sbjct  8     VLLAIL  13


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4957  KAFLI  4943
             K FLI
Sbjct  21    KVFLI  25


>ref|NP_008978.2|  butyrophilin subfamily 3 member A2 precursor [Homo sapiens]
Length=334

 GENE ID: 11118 BTN3A2 | butyrophilin, subfamily 3, member A2 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.8 bits (44),  Expect(2) =   186
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6032  LPILLL  6015
             LPILLL
Sbjct  256   LPILLL  261


 Score = 19.7 bits (39),  Expect(2) =   186
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6022  YFLW  6011
             YFLW
Sbjct  268   YFLW  271


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  1810  SDLR-EVKGY  1784
             S+L  EVKGY
Sbjct  148   SNLHVEVKGY  157


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = -3

Query  3110  MSIGLAPASVFLLL----SLLM  3057
             M   LA    FLLL    SLL+
Sbjct  3     MASSLA----FLLLNFHVSLLL  20


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8828  QLVTPC  8845
             QL TPC
Sbjct  22    QLLTPC  27


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  1412  LMAGSSYSL  1386
             L+AG SY L
Sbjct  262   LLAGASYFL  270


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3368  ISLRE  3354
             ISLRE
Sbjct  302   ISLRE  306


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4603  CHLF  4592
             CHLF
Sbjct  52    CHLF  55


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2189  KALVE  2203
             KALVE
Sbjct  136   KALVE  140


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4944  IRKALLG  4964
             IR  LLG
Sbjct  222   IRNSLLG  228


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5368  EQEM  5379
             EQEM
Sbjct  287   EQEM  290


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5319  KWINSS  5302
             KW+ SS
Sbjct  66    KWVSSS  71


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8271  KELVEL  8288
             K LVEL
Sbjct  136   KALVEL  141


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6276  TLPLMLVL  6253
             TLP +L L
Sbjct  255   TLPILLLL  262


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  4229  ESMNKEL--KKI  4258
             ES+  EL  KKI
Sbjct  306   ESLQEELKRKKI  317


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 19/38 (50%)
 Frame = -3

Query  6086  HASVL------PC--HFSTC*NFLSHL----PILLLVG  6009
             H S L      PC  +FS        L    PIL +VG
Sbjct  15    HVSLLLVQLLTPCSAQFSV-------LGPSGPILAMVG  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  1608  LSFGVLPFHIS  1576
             L F  L FH+S
Sbjct  7     LAFLLLNFHVS  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2499  ILGMV  2485
             IL MV
Sbjct  40    ILAMV  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2423  PVLLL  2409
             P+LLL
Sbjct  257   PILLL  261


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  277  LASCRARFS  251
            L  C A FS
Sbjct  24   LTPCSAQFS  32


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  462  VLAPCLPIL  436
            VL P  PIL
Sbjct  33   VLGPSGPIL  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2203  NLYRDGK  2223
             N Y DGK
Sbjct  77    NVYADGK  83


>sp|Q13191.2|CBLB_HUMAN  RecName: Full=E3 ubiquitin-protein ligase CBL-B; AltName: Full=Signal 
transduction protein CBL-B; AltName: Full=SH3-binding 
protein CBL-B; AltName: Full=Casitas B-lineage lymphoma proto-oncogene 
b; AltName: Full=RING finger protein 56
Length=982

 GENE ID: 868 CBLB | Cas-Br-M (murine) ecotropic retroviral transforming
sequence b [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   196
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  8639  ANSLPKKTR  8665
             ANSL  KTR
Sbjct  691   ANSLSEKTR  699


 Score = 19.7 bits (39),  Expect(2) =   196
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 13/28 (46%)
 Frame = +3

Query  8781  PVEPD----KIEEANKGENTSLLHPVSL  8852
             PVE D    KI         S  HPVSL
Sbjct  701   PVEEDDDEYKIP-------SS--HPVSL  719


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  3618  HNQIKVNQ  3641
             H++IKV Q
Sbjct  350   HDHIKVTQ  357


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  9031  PVPPRPRLPG  9002
             P PP  RLPG
Sbjct  868   PLPPARRLPG  877


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9031  PVPPR  9017
             PVPPR
Sbjct  506   PVPPR  510


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5334  RHSRIG  5351
             RHSR+G
Sbjct  628   RHSRVG  633


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 3/12 (25%)
 Frame = +1

Query  8047  SA-EPVPLQLPP  8079
             SA +PVP  LPP
Sbjct  771   SASDPVP--LPP  780


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5831  AWCP  5820
             AWCP
Sbjct  592   AWCP  595


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1143  IPGLSIF  1123
             IP LSI+
Sbjct  757   IPDLSIY  763


 Score = 16.8 bits (32),  Expect(2) = 11299
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  545   PAPPP  549


 Score = 16.3 bits (31),  Expect(2) = 11299
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5815  PPPSPQ  5798
             PPP P+
Sbjct  555   PPPPPE  560


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1611  CTERQ  1625
             CT+RQ
Sbjct  470   CTDRQ  474


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7893  LGRDIHH  7913
             L R IHH
Sbjct  571   LSRHIHH  577


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  559  SSSDPV  542
            S SDPV
Sbjct  771  SASDPV  776


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 15/45 (33%)
 Frame = -1

Query  7666  VPLHPGRVIPNLFQRFITPTS-IPRHSSGANEFSRATPNPQELLI  7535
             VPL P R  P        PT   P H S  N   R TP   +LLI
Sbjct  776   VPLPPAR--P--------PTRDNPKHGSSLN---R-TPSDYDLLI  806


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5789  YQHL  5800
             YQHL
Sbjct  82    YQHL  85


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3317  LANTLS  3300
             LAN LS
Sbjct  690   LANSLS  695


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  5700  ENIKTKKNRQ  5729
             EN+KT    Q
Sbjct  878   ENVKTNRTSQ  887


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2739  VSPHLN  2722
             VSP LN
Sbjct  976   VSPRLN  981


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3602  LGIIQA  3619
             LGII A
Sbjct  23    LGIIDA  28


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  7788  NQFHKLAHL  7762
             NQ  KLA+L
Sbjct  95    NQ--KLAQL  101


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4663  FTKLFH  4646
             FT LF+
Sbjct  236   FTRLFQ  241


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8362  FDHLPP  8345
             FD LPP
Sbjct  814   FDALPP  819


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  5821  PS--PPPSP  5801
             PS  PPP P
Sbjct  819   PSLPPPPPP  827


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4818  LFLLYADP  4795
             LFLL  DP
Sbjct  851   LFLLPSDP  858


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5383  PVDPRLE  5403
             PV PRL+
Sbjct  506   PVPPRLD  512


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7666  VPLHPGR  7646
             VPL P R
Sbjct  867   VPLPPAR  873


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1347  GPAATLE  1367
             GP A LE
Sbjct  924   GPEAALE  930


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6450  FRIAK  6436
             FRI K
Sbjct  171   FRITK  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1895  LEEMSL  1912
             LE M L
Sbjct  211   LEAMAL  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3581  VTDSQYAL  3604
             VT  QY L
Sbjct  355   VTQEQYEL  362


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3785  HLKIVLS  3765
             HL  +LS
Sbjct  84    HLRLILS  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +1

Query  1417  EFW  1425
             EFW
Sbjct  180   EFW  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1671  GNFLQSRP  1694
             GN LQ  P
Sbjct  304   GNILQTIP  311


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4654  LFHVLI  4637
             LF+ LI
Sbjct  316   LFQALI  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2833  QHYRLYC  2813
             ++Y LYC
Sbjct  358   EQYELYC  364


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 8/19 (42%)
 Frame = -1

Query  9034  SPVPPRPRLPGKSPAESPL  8978
             SPV         SP  SPL
Sbjct  476   SPV--------TSPGSSPL  486


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2893  PIQFPH  2876
             P Q PH
Sbjct  496   PLQIPH  501


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  554   PPPPP  558


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  554   PPPPP  558


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  555   PPPPP  559


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP  PP P
Sbjct  901   APARPPKP  908


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8327  FPSPV  8313
             FP PV
Sbjct  972   FPPPV  976


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8186  ELKNS  8200
             +LKNS
Sbjct  66    QLKNS  70


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6733  KNRKYE  6750
             K R YE
Sbjct  129   KERMYE  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  544  QDQKNL  561
            QD  NL
Sbjct  138  QDRRNL  143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +3

Query  7626  WNRF-GITRPG  7655
             WN F  +T PG
Sbjct  250   WN-FLAVTHPG  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  8364  FLTTCHPSY  8338
             FL   HP Y
Sbjct  252   FLAVTHPGY  260


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 20/35 (57%)
 Frame = -1

Query  5992  TGMCGP----NI--------MY--------LCIIC  5948
             TG+C P     I        +Y        LC IC
Sbjct  342   TGLCEPTPHDHIKVTQEQYELYCEMGSTFQLCKIC  376


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4168  PTGGPNRS  4145
             PTG P  S
Sbjct  526   PTGSPKSS  533


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8637  LPVPP  8623
             LP PP
Sbjct  544   LPAPP  548


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6152  SLKCT  6166
             S KCT
Sbjct  683   SIKCT  687


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -2

Query  9117  PGSDLV*PERPSTG  9076
             PGS      RPS G
Sbjct  839   PGS----SSRPSSG  848


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  5113  LFHLSSVSFVTL  5078
             LF L S  FV L
Sbjct  851   LFLLPSDPFVDL  862


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7888  IHYRK  7874
             IH RK
Sbjct  917   IHHRK  921


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2672  LEIGQ  2686
             LEI Q
Sbjct  953   LEIAQ  957


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9031  PVPPR  9017
             PV PR
Sbjct  975   PVSPR  979


>ref|NP_001075042.1|  GRB2-associated-binding protein 3 isoform 1 [Homo sapiens]
Length=587

 GENE ID: 139716 GAB3 | GRB2-associated binding protein 3 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   216
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 15/34 (44%)
 Frame = -2

Query  9033  PQ--SRP------------GHASLESPQRKVPCS  8974
             PQ  SRP             HASL    R VPCS
Sbjct  445   PQRKSRPPPLDLRNLSIIREHASL-TRTRTVPCS  477


 Score = 18.0 bits (35),  Expect(2) =   216
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -3

Query  9053  GSEGSPLPS-PAQATPP  9006
             GS  SPLP  PA   PP
Sbjct  421   GSISSPLPELPANLEPP  437


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 11/28 (39%)
 Frame = +3

Query  1077  GWMTNNPPIPVGE----IY---KRWIIL  1139
             GW+   PP    E     Y   KRW +L
Sbjct  10    GWLVKSPP----ERKLQRYAWRKRWFVL  33


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +1

Query  3589  LTICIRNHSSTTR  3627
             L I IR H S TR
Sbjct  459   LSI-IREHASLTR  470


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7661  WDREIN  7678
             W REIN
Sbjct  259   WSREIN  264


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5016  SLQYLAL  5036
             SL YLAL
Sbjct  531   SLDYLAL  537


 Score = 18.9 bits (37),  Expect(2) =  2727
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  992  MH-WMHSI  972
            M+ W HSI
Sbjct  105  MQVWVHSI  112


 Score = 17.6 bits (34),  Expect(2) =  2727
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  970  HSAASSL  950
            H A SSL
Sbjct  151  HAASSSL  157


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6074  LPCHFS  6057
             LPC FS
Sbjct  375   LPCRFS  380


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  191  NRDLK  205
            NRDLK
Sbjct  440  NRDLK  444


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6693  VSREDQ  6710
             VSRED+
Sbjct  499   VSREDE  504


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1718  ELQVW  1732
             E+QVW
Sbjct  104   EMQVW  108


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  4626  DRMRIRTWK  4652
             D MR  TWK
Sbjct  350   DNMR--TWK  356


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1248  LEFYR  1234
             LE+YR
Sbjct  45    LEYYR  49


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3632  SESEL  3646
             SESEL
Sbjct  174   SESEL  178


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2809  FIRMEF  2792
             F+R EF
Sbjct  75    FVRKEF  80


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5286  IMASTP  5269
             IM  TP
Sbjct  303   IMSNTP  308


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8297  IPRRI  8311
             +PRRI
Sbjct  340   VPRRI  344


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3100  PMDISNLS  3123
             P+D  NLS
Sbjct  453   PLDLRNLS  460


 Score = 17.2 bits (33),  Expect(2) = 19919
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  940  KRPSMRKLQ  966
            K P  RKLQ
Sbjct  14   KSPPERKLQ  22


 Score = 15.1 bits (28),  Expect(2) = 19919
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  1077  GWMTNNP  1097
             G M  NP
Sbjct  36    GRMSGNP  42


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1083  MTNNPP  1100
             M N PP
Sbjct  304   MSNTPP  309


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8649  SQRRQD  8666
             S+RRQ+
Sbjct  319   SERRQE  324


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7016  LPCR  7027
             LPCR
Sbjct  375   LPCR  378


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4622  SRQDED  4639
             SR+DE+
Sbjct  500   SREDEE  505


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4000  YQDNFSF  3980
             +Q+NF F
Sbjct  80    FQNNFVF  86


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8002  IHSISE  8019
             +HSIS+
Sbjct  109   VHSISQ  114


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
 Frame = -1

Query  8323  QALSY--SSRYVANSSTSSL  8270
             + LSY  SS     SS SSL
Sbjct  130   ESLSYTPSS--LQPSSASSL  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  967  SAASSLM  947
            S ASSL+
Sbjct  142  SSASSLL  148


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4636  LILSTCHT  4613
             L+LS C T
Sbjct  185   LVLSNCET  192


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1727  VWGRDNNSP  1753
             +W R+ N P
Sbjct  258   IWSREINGP  266


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6973  TPSTIKPS  6950
             TPS   PS
Sbjct  135   TPSSLQPS  142


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5012  YLVMS  4998
             YLV+S
Sbjct  184   YLVLS  188


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6465  RSMEQ  6479
             RS+EQ
Sbjct  212   RSLEQ  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +3

Query  6468  SMEQDHVQMSAQ  6503
             S E   V MS Q
Sbjct  389   SIEDSYVPMSPQ  400


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2366  ELPRSLE  2346
             ELP  LE
Sbjct  429   ELPANLE  435


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  7486  APDCELQQMLL  7454
             AP   +QQ LL
Sbjct  545   AP---MQQKLL  552


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7018  PMQNK  7032
             PMQ K
Sbjct  546   PMQQK  550


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3568  RSKHS  3582
             R KHS
Sbjct  49    RNKHS  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8198  SAVSLLNA  8221
             SA SLL A
Sbjct  143   SASSLLTA  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7932  SQPRGDP  7952
             S PR DP
Sbjct  156   SLPRDDP  162


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4900  WSASSGS  4880
             WS  SGS
Sbjct  326   WSTHSGS  332


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6226  RDKKL  6240
             RDK L
Sbjct  367   RDKRL  371


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6097  DYILM  6083
             DYI M
Sbjct  414   DYIPM  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7479  TVSCNR  7462
             TV C R
Sbjct  473   TVPCSR  478


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7824  NNFIY  7810
             NNF++
Sbjct  82    NNFVF  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6176  NDTNTN  6193
             +D NTN
Sbjct  160   DDPNTN  165


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  308   PPPRP  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  247  PSPASREL  224
            P P  R+L
Sbjct  436  PPPVNRDL  443


>ref|NP_542179.1|  GRB2-associated-binding protein 3 isoform 2 [Homo sapiens]
Length=586

 GENE ID: 139716 GAB3 | GRB2-associated binding protein 3 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   216
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 15/34 (44%)
 Frame = -2

Query  9033  PQ--SRP------------GHASLESPQRKVPCS  8974
             PQ  SRP             HASL    R VPCS
Sbjct  444   PQRKSRPPPLDLRNLSIIREHASL-TRTRTVPCS  476


 Score = 18.0 bits (35),  Expect(2) =   216
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -3

Query  9053  GSEGSPLPS-PAQATPP  9006
             GS  SPLP  PA   PP
Sbjct  420   GSISSPLPELPANLEPP  436


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 11/28 (39%)
 Frame = +3

Query  1077  GWMTNNPPIPVGE----IY---KRWIIL  1139
             GW+   PP    E     Y   KRW +L
Sbjct  10    GWLVKSPP----ERKLQRYAWRKRWFVL  33


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +1

Query  3589  LTICIRNHSSTTR  3627
             L I IR H S TR
Sbjct  458   LSI-IREHASLTR  469


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7661  WDREIN  7678
             W REIN
Sbjct  258   WSREIN  263


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5016  SLQYLAL  5036
             SL YLAL
Sbjct  530   SLDYLAL  536


 Score = 18.9 bits (37),  Expect(2) =  2728
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  992  MH-WMHSI  972
            M+ W HSI
Sbjct  105  MQVWVHSI  112


 Score = 17.6 bits (34),  Expect(2) =  2728
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  970  HSAASSL  950
            H A SSL
Sbjct  150  HAASSSL  156


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6074  LPCHFS  6057
             LPC FS
Sbjct  374   LPCRFS  379


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  191  NRDLK  205
            NRDLK
Sbjct  439  NRDLK  443


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6693  VSREDQ  6710
             VSRED+
Sbjct  498   VSREDE  503


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1718  ELQVW  1732
             E+QVW
Sbjct  104   EMQVW  108


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  4626  DRMRIRTWK  4652
             D MR  TWK
Sbjct  349   DNMR--TWK  355


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1248  LEFYR  1234
             LE+YR
Sbjct  45    LEYYR  49


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3632  SESEL  3646
             SESEL
Sbjct  173   SESEL  177


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2809  FIRMEF  2792
             F+R EF
Sbjct  75    FVRKEF  80


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5286  IMASTP  5269
             IM  TP
Sbjct  302   IMSNTP  307


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8297  IPRRI  8311
             +PRRI
Sbjct  339   VPRRI  343


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3100  PMDISNLS  3123
             P+D  NLS
Sbjct  452   PLDLRNLS  459


 Score = 17.2 bits (33),  Expect(2) = 19933
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  940  KRPSMRKLQ  966
            K P  RKLQ
Sbjct  14   KSPPERKLQ  22


 Score = 15.1 bits (28),  Expect(2) = 19933
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  1077  GWMTNNP  1097
             G M  NP
Sbjct  36    GRMSGNP  42


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1083  MTNNPP  1100
             M N PP
Sbjct  303   MSNTPP  308


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8649  SQRRQD  8666
             S+RRQ+
Sbjct  318   SERRQE  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7016  LPCR  7027
             LPCR
Sbjct  374   LPCR  377


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4622  SRQDED  4639
             SR+DE+
Sbjct  499   SREDEE  504


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4000  YQDNFSF  3980
             +Q+NF F
Sbjct  80    FQNNFVF  86


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8002  IHSISE  8019
             +HSIS+
Sbjct  109   VHSISQ  114


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 4/20 (20%)
 Frame = -1

Query  8323  QALSY--SSRYVANSSTSSL  8270
             + LSY  SS     SS SSL
Sbjct  129   ESLSYTPSS--LQPSSASSL  146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  967  SAASSLM  947
            S ASSL+
Sbjct  141  SSASSLL  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4636  LILSTCHT  4613
             L+LS C T
Sbjct  184   LVLSNCET  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1727  VWGRDNNSP  1753
             +W R+ N P
Sbjct  257   IWSREINGP  265


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6973  TPSTIKPS  6950
             TPS   PS
Sbjct  134   TPSSLQPS  141


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5012  YLVMS  4998
             YLV+S
Sbjct  183   YLVLS  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6465  RSMEQ  6479
             RS+EQ
Sbjct  211   RSLEQ  215


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +3

Query  6468  SMEQDHVQMSAQ  6503
             S E   V MS Q
Sbjct  388   SIEDSYVPMSPQ  399


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2366  ELPRSLE  2346
             ELP  LE
Sbjct  428   ELPANLE  434


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  7486  APDCELQQMLL  7454
             AP   +QQ LL
Sbjct  544   AP---MQQKLL  551


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7018  PMQNK  7032
             PMQ K
Sbjct  545   PMQQK  549


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3568  RSKHS  3582
             R KHS
Sbjct  49    RNKHS  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8198  SAVSLLNA  8221
             SA SLL A
Sbjct  142   SASSLLTA  149


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7932  SQPRGDP  7952
             S PR DP
Sbjct  155   SLPRDDP  161


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4900  WSASSGS  4880
             WS  SGS
Sbjct  325   WSTHSGS  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6226  RDKKL  6240
             RDK L
Sbjct  366   RDKRL  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6097  DYILM  6083
             DYI M
Sbjct  413   DYIPM  417


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7479  TVSCNR  7462
             TV C R
Sbjct  472   TVPCSR  477


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7824  NNFIY  7810
             NNF++
Sbjct  82    NNFVF  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6176  NDTNTN  6193
             +D NTN
Sbjct  159   DDPNTN  164


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  307   PPPRP  311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  247  PSPASREL  224
            P P  R+L
Sbjct  435  PPPVNRDL  442


>pdb|2RCJ|C  Chain C, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|D  Chain D, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|G  Chain G, Solution Structure Of Human Immunoglobulin M
 7 more sequence titles
 pdb|2RCJ|H  Chain H, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|K  Chain K, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|L  Chain L, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|O  Chain O, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|P  Chain P, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|S  Chain S, Solution Structure Of Human Immunoglobulin M
 pdb|2RCJ|T  Chain T, Solution Structure Of Human Immunoglobulin M
Length=523


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   220
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  501   NVFSCSVM  508


 Score = 18.0 bits (35),  Expect(2) =   220
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  484   FFLY  487


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  1731  GVETTTPPQKQ  1763
             GVETT P  KQ
Sbjct  160   GVETTKPS-KQ  169


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  484   FFLYSK  489


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  275   GLYSLSSV--VT  284


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  467   PENNYKTTPPV  477


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             YSC V H
Sbjct  193   YSCQVTH  199


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWY Q
Sbjct  33    NWYQQ  37


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2029  RTYTCQ  2046
             R Y CQ
Sbjct  191   RSYSCQ  196


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATLYC  596
            PS    SEEL    N  ATL C
Sbjct  122  PS----SEELQA--NK-ATLVC  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  375   QYNSTYRVVSVLTVLHQNW  393


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 7/24 (29%)
 Frame = +2

Query  749  PGANGTSGH---IT*NFKCMGKSS  811
            P A GT G+   I     C G SS
Sbjct  8    PSASGTPGQRVTIS----CTGTSS  27


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7816  YIPQPI  7799
             Y PQP+
Sbjct  246   YFPQPV  251


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4588  WKTDG  4602
             WK DG
Sbjct  150   WKADG  154


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  268   PAVLQSS  274


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7935  QPRGDPT  7955
             QP  +PT
Sbjct  110   QPKANPT  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  267   FPAVLQSS  274


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  286   PSSSLGTQTYICNV  299


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  287   SSSLGTQTY  295


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  354   KFNWYV  359


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  358   YVDG  361


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  426   PQVYTL  431


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  484   FFLYS  488


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2829  TIGCT  2815
             TI CT
Sbjct  19    TISCT  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  271   LQSSGL  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9094  RETQY  9080
             RE QY
Sbjct  372   REQQY  376


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  386   LTVLHQ  391


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  476   PVLDSDGSFF  485


>pdb|1HZH|H  Chain H, Crystal Structure Of The Intact Human Igg B12 With Broad 
And Potent Activity Against Primary Hiv-1 Isolates: A Template 
For Hiv Vaccine Design
 pdb|1HZH|K  Chain K, Crystal Structure Of The Intact Human Igg B12 With Broad 
And Potent Activity Against Primary Hiv-1 Isolates: A Template 
For Hiv Vaccine Design
Length=457


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   225
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  431   NVFSCSVM  438


 Score = 18.0 bits (35),  Expect(2) =   225
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  414   FFLY  417


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +1

Query  8329  DFAIRWV--ASGQ  8361
             +F I WV  A GQ
Sbjct  31    NFVIHWVRQAPGQ  43


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 13/31 (41%)
 Frame = +1

Query  7282  SGAERKK----------SSGNR--SFV-PWV  7335
             SGAE KK           SG R   FV  WV
Sbjct  7     SGAEVKKPGASVKVSCQASGYRFSNFVIHWV  37


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  414   FFLYSK  419


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  188   GLYSLSSV--VT  197


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  397   PENNYKTTPPV  407


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  1378  VIISSSVAAGPNAF  1337
             VI+SS    GP  F
Sbjct  123   VIVSSASTKGPSVF  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  305   QYNSTYRVVSVLTVLHQDW  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  181   PAVLQSS  187


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  293   EVHN  296


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  180   FPAVLQSS  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  199   PSSSLGTQTYICNV  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  200   SSSLGTQTY  208


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  284   KFNWYV  289


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  288   YVDG  291


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  356   PQVYTL  361


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  414   FFLYS  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  2780  WMG  2788
             WMG
Sbjct  47    WMG  49


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4046  AETGQETAY  4072
             A+T   TAY
Sbjct  72    ADTSANTAY  80


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  184   LQSSGL  189


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  316   LTVLHQ  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  406   PVLDSDGSFF  415


>pdb|3L5H|A  Chain A, Crystal Structure Of The Full Ectodomain Of Human Gp130: 
New Into The Molecular Assembly Of Receptor Complexes
Length=589


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +2

Query  2468  RKYTAF--TIPSINNET  2512
             R YT F  TI  I NET
Sbjct  529   RNYTIFYRTI--IGNET  543


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6042  SVTFTNTTS  6016
             SVTFT+  S
Sbjct  65    SVTFTDIAS  73


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  5874  GS-QSIMGYLCGRKQPP  5921
             GS +SI  YL   KQ P
Sbjct  482   GSPESIKAYL---KQAP  495


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8428  GWEQHLET  8451
             G E HLET
Sbjct  126   GRETHLET  133


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/18 (38%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = -1

Query  2305  FSTVFFLYGKYWSI-VWI  2255
             +STV+F       I VW+
Sbjct  163   YSTVYFV-----NIEVWV  175


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6882  ISGSPPE  6862
             ISG PPE
Sbjct  98    ISGLPPE  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  633  LPWCLLS  613
            L WC LS
Sbjct  432  LEWCVLS  438


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 1/13 (7%)
 Frame = +3

Query  951  NEEAAEWDRVHPV  989
            NE   EWD   PV
Sbjct  510  NEAVLEWDQL-PV  521


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +1

Query  3028  RT---STWS  3045
             RT   STWS
Sbjct  239   RTKDASTWS  247


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = -1

Query  9106  SGLTRETQYRQKAAAY  9059
             S LT +T Y    AAY
Sbjct  557   SSLTSDTLYMVRMAAY  572


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4549  FYVTII  4532
             FY TII
Sbjct  534   FYRTII  539


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  5345  NRRYSTEESKKWSQ  5386
             N  Y T +   WSQ
Sbjct  235   NIQYRTKDASTWSQ  248


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8925  PRDEML  8908
             P D ML
Sbjct  411   PKDNML  416


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4433  IQNFRVYYR  4459
             I N+ ++YR
Sbjct  528   IRNYTIFYR  536


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1074  IGWMTNNPPIP  1106
             I W TN   IP
Sbjct  42    IVWKTNHFTIP  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1639  PKKLAC  1622
             PK L C
Sbjct  106   PKNLSC  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5860  YRKIVG  5877
             YR I+G
Sbjct  535   YRTIIG  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2243  IGPENP  2260
             I PE P
Sbjct  8     ISPESP  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1209  PFRDYV  1226
             PF +YV
Sbjct  268   PFTEYV  273


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7489  QAAPGKNP  7512
             QA P K P
Sbjct  493   QAPPSKGP  500


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1978  IILSY  1964
             IIL Y
Sbjct  230   IILKY  234


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6293  FFYKLD  6310
             F YK D
Sbjct  309   FWYKID  314


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +3

Query  5085  TKLT----EDR  5105
             TKLT     DR
Sbjct  362   TKLTVNLTNDR  372


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6609  LSVKLTD  6589
             L V LT+
Sbjct  364   LTVNLTN  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  761  HLPLDV  744
            +LP DV
Sbjct  518  QLPVDV  523


>pdb|3L5J|A  Chain A, Crystal Structure Of Fniii Domains Of Human Gp130 (Domains 
4
 pdb|3L5J|B  Chain B, Crystal Structure Of Fniii Domains Of Human Gp130 (Domains 
4
Length=288


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +2

Query  2468  RKYTAF--TIPSINNET  2512
             R YT F  TI  I NET
Sbjct  230   RNYTIFYRTI--IGNET  244


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  5874  GS-QSIMGYLCGRKQPP  5921
             GS +SI  YL   KQ P
Sbjct  183   GSPESIKAYL---KQAP  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  633  LPWCLLS  613
            L WC LS
Sbjct  133  LEWCVLS  139


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 1/13 (7%)
 Frame = +3

Query  951  NEEAAEWDRVHPV  989
            NE   EWD   PV
Sbjct  211  NEAVLEWDQL-PV  222


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = -1

Query  9106  SGLTRETQYRQKAAAY  9059
             S LT +T Y    AAY
Sbjct  258   SSLTSDTLYMVRMAAY  273


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4549  FYVTII  4532
             FY TII
Sbjct  235   FYRTII  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8925  PRDEML  8908
             P D ML
Sbjct  112   PKDNML  117


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4433  IQNFRVYYR  4459
             I N+ ++YR
Sbjct  229   IRNYTIFYR  237


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5860  YRKIVG  5877
             YR I+G
Sbjct  236   YRTIIG  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7489  QAAPGKNP  7512
             QA P K P
Sbjct  194   QAPPSKGP  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6293  FFYKLD  6310
             F YK D
Sbjct  10    FWYKID  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +3

Query  5085  TKLT----EDR  5105
             TKLT     DR
Sbjct  63    TKLTVNLTNDR  73


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6609  LSVKLTD  6589
             L V LT+
Sbjct  65    LTVNLTN  71


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  761  HLPLDV  744
            +LP DV
Sbjct  219  QLPVDV  224


>pdb|3L5I|A  Chain A, Crystal Structure Of Fniii Domains Of Human Gp130 (Domains 
4
Length=290


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +2

Query  2468  RKYTAF--TIPSINNET  2512
             R YT F  TI  I NET
Sbjct  230   RNYTIFYRTI--IGNET  244


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = -1

Query  9106  SGLTRETQYRQKAAAY  9059
             S LT +T Y    AAY
Sbjct  258   SSLTSDTLYXVRXAAY  273


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  5874  GS-QSIMGYLCGRKQPP  5921
             GS +SI  YL   KQ P
Sbjct  183   GSPESIKAYL---KQAP  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  633  LPWCLLS  613
            L WC LS
Sbjct  133  LEWCVLS  139


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 1/13 (7%)
 Frame = +3

Query  951  NEEAAEWDRVHPV  989
            NE   EWD   PV
Sbjct  211  NEAVLEWDQL-PV  222


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4549  FYVTII  4532
             FY TII
Sbjct  235   FYRTII  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4433  IQNFRVYYR  4459
             I N+ ++YR
Sbjct  229   IRNYTIFYR  237


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  4248  NSLFIDSTTP  4219
             N L ++ TTP
Sbjct  115   NXLWVEWTTP  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5860  YRKIVG  5877
             YR I+G
Sbjct  236   YRTIIG  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7489  QAAPGKNP  7512
             QA P K P
Sbjct  194   QAPPSKGP  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6293  FFYKLD  6310
             F YK D
Sbjct  10    FWYKID  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +3

Query  5085  TKLT----EDR  5105
             TKLT     DR
Sbjct  63    TKLTVNLTNDR  73


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6609  LSVKLTD  6589
             L V LT+
Sbjct  65    LTVNLTN  71


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  761  HLPLDV  744
            +LP DV
Sbjct  219  QLPVDV  224


>ref|NP_742011.2|  tumor necrosis factor ligand superfamily member 14 isoform 2 
[Homo sapiens]
Length=204

 GENE ID: 8740 TNFSF14 | tumor necrosis factor (ligand) superfamily, member 14
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
 Frame = -3

Query  1208  FLWSLSY------VQNAGRAIHSYYFI  1146
             FL  LSY      V  AG     YY+I
Sbjct  86    FLRGLSYHDGALVVTKAG-----YYYI  107


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2357  WEVQLG  2374
             WE QLG
Sbjct  78    WETQLG  83


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  2754  FLSGVVSPHL  2725
             FL GVV  HL
Sbjct  166   FLGGVV--HL  173


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8884  NTSLSGS  8864
             N SL GS
Sbjct  66    NSSLTGS  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1316  VRILDQ  1299
             VR+LD+
Sbjct  181   VRVLDE  186


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8681  DLPHTRL  8701
             D P TRL
Sbjct  18    DIPFTRL  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8649  SQRRQ  8663
             S+RRQ
Sbjct  27    SHRRQ  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3913  RRSH  3924
             RRSH
Sbjct  51    RRSH  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5884  LLWGT  5898
             LLW T
Sbjct  76    LLWET  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2371  RNTTSRRV  2394
             R T S RV
Sbjct  153   RATSSSRV  160


>pdb|3LXW|A  Chain A, Crystal Structure Of Human Gtpase Imap Family Member 
1
 pdb|3LXW|B  Chain B, Crystal Structure Of Human Gtpase Imap Family Member 
1
Length=247


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +3

Query  8394  ERMRR-AEPAADRV  8432
             ER+RR AE  A RV
Sbjct  232   ERLRRVAERVAARV  245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6422  NNVWELAQ  6399
             N V ELAQ
Sbjct  216   NEVYELAQ  223


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8644  FTPKED  8661
             FT KED
Sbjct  145   FTRKED  150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2506  IVYTR  2492
             IV+TR
Sbjct  143   IVFTR  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/21 (33%), Positives = 7/21 (33%), Gaps = 13/21 (61%)
 Frame = -2

Query  2496  LGMV-------------NAVY  2473
             LGMV             N VY
Sbjct  199   LGMVEGLVLEHKGAHYSNEVY  219


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2679  ISKSDP  2662
             +SK DP
Sbjct  85    VSKTDP  90


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6702  EDQGEHLL  6725
             E Q E+LL
Sbjct  192   EAQVEQLL  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7538  QQLLG  7552
             +QLLG
Sbjct  196   EQLLG  200


>ref|NP_001164632.1|  sialic acid-binding Ig-like lectin 10 isoform 7 precursor [Homo 
sapiens]
Length=454

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4943  YKKGLIRT  4966
             YKKGLI T
Sbjct  296   YKKGLIST  303


 Score = 21.8 bits (44),  Expect =   981
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -3

Query  239  CVERAPL----VSLSLS  201
            C  R PL    VSLSLS
Sbjct  277  CHARHPLGSQHVSLSLS  293


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  7906  ISLPNSIHYRK  7874
             +SL  S+HY K
Sbjct  288   VSLSLSVHYKK  298


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  411   QAPESQESQ------------EEL  422


 Score = 17.2 bits (33),  Expect(2) = 12480
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  433  RPRPEAR  439


 Score = 16.3 bits (31),  Expect(2) = 12480
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  404  PEPKSSTQAPESQ  416


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  166   VSAQRTVRLR  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  166  VSAQRTVRLR  175


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  251   LSPSQPS  257


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  288   VSLSLS  293


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  339   ETPRPRFS  346


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  175   RVAYAPRDL  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  251   LSPSQPSDP  259


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  335  RTQTETP-----RPRFSRHS  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  341   PRPR  344


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  169   QRTVRLRV  176


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  7570  SRA-TPNPQE  7544
             SR  TP+P E
Sbjct  188   SRDNTPDPPE  197


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  229   CLVCVTHSSP  238


 Score = 15.5 bits (29),  Expect(2) = 45190
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  300   LISTAF  305


 Score = 15.1 bits (28),  Expect(2) = 45190
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5912  LPSTQVPH  5889
             LP  QV H
Sbjct  264   LPRVQVEH  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  216   NGTSLPV  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4737  FLDEGF  4720
             F+++GF
Sbjct  130   FMNDGF  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6855  LKIIVLLF  6832
             LK+ VL F
Sbjct  137   LKVTVLSF  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  232   CVTHS  236


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  258  DPGVLE  263


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  372   ATPN  375


>ref|NP_001164631.1|  sialic acid-binding Ig-like lectin 10 isoform 6 precursor [Homo 
sapiens]
Length=519

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4943  YKKGLIRT  4966
             YKKGLI T
Sbjct  361   YKKGLIST  368


 Score = 21.8 bits (44),  Expect =   981
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -3

Query  239  CVERAPL----VSLSLS  201
            C  R PL    VSLSLS
Sbjct  342  CHARHPLGSQHVSLSLS  358


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  7906  ISLPNSIHYRK  7874
             +SL  S+HY K
Sbjct  353   VSLSLSVHYKK  363


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             QKTV +RV
Sbjct  144   QKTVRLRV  151


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  476   QAPESQESQ------------EEL  487


 Score = 17.2 bits (33),  Expect(2) = 11839
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  498  RPRPEAR  504


 Score = 16.3 bits (31),  Expect(2) = 11839
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  469  PEPKSSTQAPESQ  481


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  8473  VIAPCFSRSRDAAPTL  8426
             VI    S SRD  P L
Sbjct  159   VI----SISRDNTPAL  170


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  316   LSPSQPS  322


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  353   VSLSLS  358


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  404   ETPRPRFS  411


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  188   FLRLLC  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  150   RVAYAPRDL  158


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  316   LSPSQPSDP  324


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  400  RTQTETP-----RPRFSRHS  414


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  406   PRPR  409


 Score = 15.5 bits (29),  Expect(2) = 42637
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  365   LISTAF  370


 Score = 15.1 bits (28),  Expect(2) = 42637
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5912  LPSTQVPH  5889
             LP  QV H
Sbjct  329   LPRVQVEH  336


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  294   CLVCVTHSSP  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  5379  HFLLSSVE*RLFCYVDTQ  5326
             +FL      RL C  D Q
Sbjct  187   QFL------RLLCAADSQ  198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  191   LLCAADSQPP  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVL S
Sbjct  209   NRVLSS  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  281   NGTSLPV  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4737  FLDEGF  4720
             F+++GF
Sbjct  130   FMNDGF  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3731  HFLQFLC  3711
             +FL  LC
Sbjct  187   QFLRLLC  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  211   VLSSSH  216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  297   CVTHS  301


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  323  DPGVLE  328


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  437   ATPN  440


>ref|NP_001164629.1|  sialic acid-binding Ig-like lectin 10 isoform 4 precursor [Homo 
sapiens]
Length=554

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4943  YKKGLIRT  4966
             YKKGLI T
Sbjct  396   YKKGLIST  403


 Score = 21.8 bits (44),  Expect =   981
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -3

Query  239  CVERAPL----VSLSLS  201
            C  R PL    VSLSLS
Sbjct  377  CHARHPLGSQHVSLSLS  393


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  7906  ISLPNSIHYRK  7874
             +SL  S+HY K
Sbjct  388   VSLSLSVHYKK  398


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  511   QAPESQESQ------------EEL  522


 Score = 17.2 bits (33),  Expect(2) = 11593
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  533  RPRPEAR  539


 Score = 16.3 bits (31),  Expect(2) = 11593
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  504  PEPKSSTQAPESQ  516


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  176   VSAQRTVRLR  185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  176  VSAQRTVRLR  185


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  8473  VIAPCFSRSRDAAPTL  8426
             VI    S SRD  P L
Sbjct  194   VI----SISRDNTPAL  205


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  351   LSPSQPS  357


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  388   VSLSLS  393


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  439   ETPRPRFS  446


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  223   FLRLLC  228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  185   RVAYAPRDL  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  351   LSPSQPSDP  359


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  435  RTQTETP-----RPRFSRHS  449


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  441   PRPR  444


 Score = 15.5 bits (29),  Expect(2) = 41309
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  400   LISTAF  405


 Score = 15.1 bits (28),  Expect(2) = 41309
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5912  LPSTQVPH  5889
             LP  QV H
Sbjct  364   LPRVQVEH  371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  179   QRTVRLRV  186


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  329   CLVCVTHSSP  338


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  5379  HFLLSSVE*RLFCYVDTQ  5326
             +FL      RL C  D Q
Sbjct  222   QFL------RLLCAADSQ  233


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  226   LLCAADSQPP  235


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVL S
Sbjct  244   NRVLSS  249


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  316   NGTSLPV  322


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4737  FLDEGF  4720
             F+++GF
Sbjct  130   FMNDGF  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8825  VLSF  8814
             VLSF
Sbjct  151   VLSF  154


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3731  HFLQFLC  3711
             +FL  LC
Sbjct  222   QFLRLLC  228


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  246   VLSSSH  251


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  332   CVTHS  336


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  358  DPGVLE  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  472   ATPN  475


>pdb|3G3N|A  Chain A, Pde7a Catalytic Domain In Complex With 3-(2,6- Difluorophenyl)-2-(Methylthio)quinazolin-4(3h)-One
Length=318


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  6502  CADIC----TW  6482
             CADIC    TW
Sbjct  222   CADICNPCRTW  232


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query  6149  HRVGLILHMAL  6117
             HR  L+L+MAL
Sbjct  211   HRH-LVLQMAL  220


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8365  LFDHLP  8348
             LF HLP
Sbjct  160   LFSHLP  165


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4382  IIATDI  4399
             I ATDI
Sbjct  180   ILATDI  185


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1071  QIGWMT  1088
             QIG MT
Sbjct  275   QIGFMT  280


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3651  LTNSDSL  3631
             LTN +SL
Sbjct  26    LTNGNSL  32


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3155  IFLF  3144
             IFLF
Sbjct  20    IFLF  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  7468  ATHSLGHQAAPG  7503
             ATH L H   PG
Sbjct  112   ATHDLDH---PG  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  743  EHPGAN  760
            +HPG N
Sbjct  117  DHPGVN  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 7/19 (36%)
 Frame = -2

Query  4341  PFLLK-------LWMNTAI  4306
             PFL K       L  NT +
Sbjct  124   PFLIKTNHYLATLYKNTSV  142


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8198  SAVSLL  8215
             SAV LL
Sbjct  150   SAVGLL  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7626  RDLLLQLA  7603
             R L LQ+A
Sbjct  212   RHLVLQMA  219


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6155  LKCTD  6169
             LKC D
Sbjct  220   LKCAD  224


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3809  HEKYHS  3826
             +E YHS
Sbjct  64    QEDYHS  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8625  PFLLK  8611
             PFL K
Sbjct  124   PFLIK  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6038  SHLP  6027
             SHLP
Sbjct  162   SHLP  165


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8365  LFDHL  8351
             LFD L
Sbjct  22    LFDRL  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8704  SLISRTTH  8727
             SLI   TH
Sbjct  107   SLIAAATH  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6035  VTENF  6049
             VTE F
Sbjct  242   VTEEF  246


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  262  ARFS  251
            ARFS
Sbjct  291  ARFS  294


>pdb|3FXI|C  Chain C, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli 
Lps Ra Complex
 pdb|3FXI|D  Chain D, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli 
Lps Ra Complex
Length=142


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 6/23 (26%)
 Frame = -2

Query  6891  CV--TISGSPPED---CLKIIVL  6838
             CV   ISGS PE+   CL  ++L
Sbjct  115   CVVEAISGS-PEEMLFCLEFVIL  136


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  6745  ISYFSYCNK  6719
             ISY  YC+K
Sbjct  14    ISY-TYCDK  21


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6088  LMHLFY  6071
             L+H FY
Sbjct  42    LLHIFY  47


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6288  YSFC  6277
             YSFC
Sbjct  84    YSFC  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2627  CLDFV  2613
             CL+FV
Sbjct  130   CLEFV  134


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5856  LQIINIPR  5833
             L+I  IPR
Sbjct  43    LHIFYIPR  50


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  430  FNLY  419
            FNLY
Sbjct  58   FNLY  61


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1781  TVSFNF  1798
             T+SF F
Sbjct  98    TISFSF  103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             Y YCD
Sbjct  16    YTYCD  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7803  QFVMLNQ  7783
             +FV L Q
Sbjct  132   EFVILHQ  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3885  TISF  3874
             TISF
Sbjct  98    TISF  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4805  MQTPI  4791
             MQ PI
Sbjct  22    MQYPI  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  845  HVFSIIRR  868
            H+F I RR
Sbjct  44   HIFYIPRR  51


>pdb|3FFC|D  Chain D, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR
 pdb|3FFC|I  Chain I, Crystal Structure Of Cf34 Tcr In Complex With Hla-B8FLR
Length=202


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -1

Query  2713  SQL----LYFCSM  2687
             SQL    +YFC M
Sbjct  80    SQLGDSAMYFCAM  92


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  115   QNPDPAVYQ  123


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6675  IQEKESV  6695
             +QEKE V
Sbjct  11    VQEKEAV  17


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  177   WSNKS  181


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 2/19 (10%)
 Frame = +2

Query  2477  TAFT-IPSINNETPGIRYQ  2530
             T  T IP I N  P + YQ
Sbjct  106   TSLTVIPNIQNPDPAV-YQ  123


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4591  SIIPND  4574
             SIIP D
Sbjct  192   SIIPED  197


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4804  IQEKE  4818
             +QEKE
Sbjct  11    VQEKE  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8092  TLDC  8103
             TLDC
Sbjct  18    TLDC  21


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 10/28 (35%)
 Frame = +3

Query  8682  IYHTQG-YFPD*Q-NYTPGPGVRYPLTF  8759
             IY  QG Y  D Q N T G   RY L F
Sbjct  47    IY--QGSY--D-QGNATEG---RYSLNF  66


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7849  YQASY  7835
             YQ SY
Sbjct  48    YQGSY  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 12/31 (38%)
 Frame = +2

Query  6149  VSLKCTDLKNDTNTNS---------SSGRMI  6214
             V L CT    DT   S         SSG MI
Sbjct  17    VTLDCT---YDTSDPSYGLFWYKQPSSGEMI  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5758  EDSGNE  5775
             ED GN+
Sbjct  94    EDTGNQ  99


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  133   SVCLF  137


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3608  IIQAQP  3625
             I Q QP
Sbjct  2     ITQTQP  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5761  DSGNESEG  5784
             D GN  EG
Sbjct  53    DQGNATEG  60


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  123   QLRDSKSSD  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  178   SNKSDFAC  185


>pdb|3FCS|A  Chain A, Structure Of Complete Ectodomain Of Integrin Aiibb3
 pdb|3FCS|C  Chain C, Structure Of Complete Ectodomain Of Integrin Aiibb3
Length=959


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -2

Query  7497  SCLMPQT---VSC  7468
             SC +PQT   VSC
Sbjct  472   SCVLPQTKTPVSC  484


 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +1

Query  172  SLAVAPEQGPESERE  216
            SL VA E+G   ERE
Sbjct  758  SLVVAAEEG---ERE  769


 Score = 23.1 bits (47),  Expect =   406
 Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 12/40 (30%)
 Frame = +1

Query  8086  RLTLDCNED--CG------TSGTQGVGSPQILVESPTVLE  8181
             R  LDC ED  C        S T   GSP  LV    VLE
Sbjct  597   RIVLDCGEDDVCVPQLQLTASVT---GSP-LLVGADNVLE  632


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 13/27 (48%)
 Frame = -1

Query  7513  QD----SCLELLD-AP----DCELQQM  7460
             QD    SC    D AP     C+LQ+M
Sbjct  873   QDPVLVSC----DSAPCTVVQCDLQEM  895


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  6906  PQLKLCVTISGSP  6868
             PQL L   + GSP
Sbjct  610   PQLQLTASVTGSP  622


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/29 (31%), Positives = 10/29 (34%), Gaps = 17/29 (58%)
 Frame = -1

Query  3889  GYYF------------FCYYR-----WQV  3854
             GYYF            F  YR     W+V
Sbjct  188   GYYFLGLLAQAPVADIFSSYRPGILLWHV  216


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  615  SLSFDAHN  592
            SLSFD  N
Sbjct  220  SLSFDSSN  227


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3801  WALSIPS  3781
             W L IPS
Sbjct  839   WGLPIPS  845


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6999  PSVLFD  6982
             PS LFD
Sbjct  66    PSLLFD  71


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6365  SVITQA  6382
             SV+TQA
Sbjct  173   SVVTQA  178


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +3

Query  8895  FDSRLAFHHVARELHPEYF  8951
             FDS            PEYF
Sbjct  223   FDSS----------NPEYF  231


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +1

Query  4156  GR--LLVGGNQAG  4188
             GR  LL G  QAG
Sbjct  518   GRRVLLLGSQQAG  530


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  199  VPVRA  185
            VPVRA
Sbjct  740  VPVRA  744


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +3

Query  7068  QCMPLPSVDKLDV  7106
             QC P P V+ L V
Sbjct  825   QCFPQPPVNPLKV  837


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3565  IRSKHS  3582
             IRSK S
Sbjct  723   IRSKNS  728


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/39 (28%), Positives = 11/39 (28%), Gaps = 25/39 (64%)
 Frame = -2

Query  939  LTFAWL-------LD------------------VPPLCL  898
            L F WL       LD                  VPPL L
Sbjct  906  LAFLWLPSLYQRPLDQFVLQSHAWFNVSSLPYAVPPLSL  944


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1051  VPAMSLP  1031
             VP +SLP
Sbjct  939   VPPLSLP  945


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8793  DKIEEANK  8816
             +K EEA K
Sbjct  117   EKTEEAEK  124


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5761  DSGNESEG  5784
             D  NE EG
Sbjct  636   DAANEGEG  643


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  7354  HYGRSLNDADG  7386
             HY R L + +G
Sbjct  658   HYMRALSNVEG  668


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7602  MLVGVINL  7625
             MLV V NL
Sbjct  703   MLVSVGNL  710


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3527  QSSDLL  3510
             Q SDLL
Sbjct  808   QPSDLL  813


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7290  CTTLLFAL  7267
             C  LLF L
Sbjct  65    CPSLLFDL  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6573  SSARLPFNSS  6544
             SS  L F+SS
Sbjct  217   SSQSLSFDSS  226


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4514  GAVVIQDN  4537
             GAV I DN
Sbjct  423   GAVDIDDN  430


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1567  RAVGNVE  1587
             RA  NVE
Sbjct  661   RALSNVE  667


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7639  PNLFQR  7622
             P L+QR
Sbjct  912   PSLYQR  917


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  9065  SCFL  9076
             SCFL
Sbjct  129   SCFL  132


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = +3

Query  5817  DGAPCSLGC**SVV---LQ  5864
             D APC       VV   LQ
Sbjct  881   DSAPC------TVVQCDLQ  893


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 19/34 (55%)
 Frame = +3

Query  4860  KRYS--------TQVDPELADQLIHL-----YYF  4922
             KRY         TQ     A +L+ L     YYF
Sbjct  164   KRYCEAGFSSVVTQ-----AGELV-LGAPGGYYF  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  1921  METKNDR  1941
             ME   DR
Sbjct  314   MESRADR  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2269  SSICH  2283
             S ICH
Sbjct  542   SPICH  546


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2532  TMCFHRD  2552
             TM F RD
Sbjct  548   TMAFLRD  554


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6618  VLALSVKL  6595
             VL L V L
Sbjct  566   VLSLNVSL  573


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6434  GFAILKCNNK  6463
             GF  L CN K
Sbjct  668   GFERLICNQK  677


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7107  EHLIC  7093
             E LIC
Sbjct  670   ERLIC  674


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3512  LCQLG  3498
             LC+LG
Sbjct  686   LCELG  690


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  4364  LHCTPQSP  4341
             L+C PQ P
Sbjct  824   LQCFPQPP  831


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1817  QRPLVTI  1837
             QR +VT+
Sbjct  899   QRAMVTV  905


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5920  GGCFL  5906
             G CFL
Sbjct  128   GSCFL  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6012  GLGSVGTQA  5986
             G  SV TQA
Sbjct  170   GFSSVVTQA  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4744  ELILG  4730
             EL+LG
Sbjct  180   ELVLG  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -1

Query  4183  LDSRP-PTG  4160
             LDS P PTG
Sbjct  407   LDS-PFPTG  414


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  5467  CFHCQVC  5487
             CF  Q C
Sbjct  484   CFNIQMC  490


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -3

Query  128  RV----TQQTGT  105
            RV     QQ GT
Sbjct  520  RVLLLGSQQAGT  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1131  IILGLN  1148
             I+L LN
Sbjct  565   IVLSLN  570


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1739  LYPRP  1725
             LY RP
Sbjct  914   LYQRP  918


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9116  QAQIW  9102
             +AQ+W
Sbjct  948   EAQVW  952


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  31   QAQIW  17
            +AQ+W
Sbjct  948  EAQVW  952


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4806  YADPN  4792
             YA PN
Sbjct  11    YAGPN  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6903  VEGNFS  6920
             VE +FS
Sbjct  156   VENDFS  161


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2583  LLWNI  2569
             LLW +
Sbjct  212   LLWHV  216


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8133  LRPRSSTIL  8107
             LR R S +L
Sbjct  399   LRSRPSQVL  407


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6651  LIVQD  6665
             L VQD
Sbjct  460   LLVQD  464


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  608  DRDKRHQG  631
            DR K  QG
Sbjct  511  DRQKPRQG  518


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             P PSP
Sbjct  842   PIPSP  846


>emb|CAR62967.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  2502  FILGMVNAVYF  2470
             F LGM   VYF
Sbjct  102   FKLGMLSGVYF  112


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2014  RYSISR  2031
             R+SISR
Sbjct  69    RFSISR  74


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  7061  GKAMYAPPISG  7093
             G A Y PP  G
Sbjct  58    GTAVYSPPLRG  68


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 7/23 (30%)
 Frame = -1

Query  3943  TVYLSMHGFSF*LTFI--TAGYY  3881
             T+YL M      L  I  TA YY
Sbjct  80    TIYLQMNS----LK-IEDTAVYY  97


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7623  LWNRFGITR  7649
             L  RF I R
Sbjct  66    LRGRFSISR  74


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMTWVRQ  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6690  SVSRED  6707
             S+SR+D
Sbjct  71    SISRDD  76


>emb|CAR62765.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=111


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 10/28 (35%)
 Frame = -3

Query  8819  SFIGLFYLIWLNWY*LV--APSKG-QWI  8745
             SF G +YLIW      +   P KG +WI
Sbjct  28    SFSG-YYLIW------IRQPPGKGLEWI  48


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = -2

Query  5457  TIAIGTS----SFRLTS  5419
             TI I TS    S  L S
Sbjct  68    TISIDTSKNQFSLKLSS  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3229  FCGYFL  3212
             F GY+L
Sbjct  29    FSGYYL  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6025  YYFLWV  6008
             YY  W+
Sbjct  32    YYLIWI  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6589  SNYYL  6575
             S YYL
Sbjct  30    SGYYL  34


>ref|NP_002964.3|  ataxin-2 [Homo sapiens]
Length=1313

 GENE ID: 6311 ATXN2 | ataxin 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +3

Query  4713  HYESPHPRISSEVHIPLGDARL  4778
             HY+S HP + S V I  G+AR+
Sbjct  1057  HYQSQHPHVYSPV-IQ-GNARM  1076


 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 0/17 (0%)
 Frame = +3

Query  1731  GVETTTPPQKQEPIDKE  1781
             GV+T  P  KQE  DKE
Sbjct  884   GVQTSSPACKQEKDDKE  900


 Score = 21.4 bits (43),  Expect(2) =   737
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  4192  WNSLQSPKSRSSR  4230
             W SLQ P  RS R
Sbjct  28    WRSLQRPARRSGR  40


 Score = 17.2 bits (33),  Expect(2) =   737
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4088  AGRWP  4102
             A RWP
Sbjct  22    AARWP  26


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  671  EKSTASSS  694
            EKST SSS
Sbjct  310  EKSTESSS  317


 Score = 20.2 bits (40),  Expect(2) =  1139
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5821  PSPPPSPQ  5798
             P PPPS Q
Sbjct  60    PGPPPSRQ  67


 Score = 17.6 bits (34),  Expect(2) =  1139
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP PPP P
Sbjct  54    AP-PPPGP  60


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5842  HPKEHGAPSP  5813
             HP  HG P P
Sbjct  598   HPSAHGSPAP  607


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  722   PKLPYSAE  745
             PKLPY  E
Sbjct  1108  PKLPYNKE  1115


 Score = 18.5 bits (36),  Expect(2) =  2655
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -1

Query  5845  QHPKEHGAPSPPPSP  5801
             Q+  +HG   P PSP
Sbjct  1156  QQQSQHGGSHPAPSP  1170


 Score = 17.6 bits (34),  Expect(2) =  2655
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = -1

Query  5824  APSPP---P-----SPQ  5798
             AP PP   P     SPQ
Sbjct  1199  APTPPSMTPASNTQSPQ  1215


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8941  RSTSRTAD  8964
             RSTS T D
Sbjct  527   RSTSHTSD  534


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1693  QSQQPH  1710
             QSQ+PH
Sbjct  1059  QSQHPH  1064


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4923  DCFSDSAI  4946
             D F DSAI
Sbjct  351   DAFTDSAI  358


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3108  VHWPCPC  3088
             V WP PC
Sbjct  550   VPWPSPC  556


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6518  GIRPVVS  6538
             GI PVVS
Sbjct  782   GISPVVS  788


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8311  YSSRYVANS  8285
             YS  YVA S
Sbjct  1034  YSTQYVAYS  1042


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -1

Query  247  PSPASRELLWFPFRFQ  200
            PSP SR     P R+Q
Sbjct  557  PSPSSRP----PSRYQ  568


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7456  LRLNSPQQ  7433
             L L SPQQ
Sbjct  1182  LHLASPQQ  1189


 Score = 18.5 bits (36),  Expect(2) =  6995
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7560  VALEN  7574
             VALEN
Sbjct  458   VALEN  462


 Score = 15.5 bits (29),  Expect(2) =  6995
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7586  TAVPWNAS  7609
             TAV  N S
Sbjct  472   TAVQRNSS  479


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  856   HYQKEPPH  879
             HYQ + PH
Sbjct  1057  HYQSQHPH  1064


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             PSP PSP
Sbjct  553   PSPCPSP  559


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5977  PNIMY  5963
             PN MY
Sbjct  966   PNMMY  970


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  302  LAYSPVAAP  276
            LA SP AAP
Sbjct  205  LA-SPAAAP  212


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9172  KASFIE  9155
             K SFIE
Sbjct  841   KDSFIE  846


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  87   KASFIE  70
            K SFIE
Sbjct  841  KDSFIE  846


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1302  VQNANPDCK  1328
             VQ   P CK
Sbjct  885   VQTSSPACK  893


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +3

Query  915   HQAAMQM  935
             HQ AM M
Sbjct  1012  HQSAM-M  1017


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8730  LVCSSANQ  8707
             LV SSA Q
Sbjct  1087  LVSSSATQ  1094


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -1

Query  4030  FY--ISTG  4013
             FY  ISTG
Sbjct  1120  FYFAISTG  1127


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6369  SLHRPVQR  6392
             SL+RP  R
Sbjct  30    SLQRPARR  37


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2    VSLVRP  19
            VSL RP
Sbjct  138  VSLARP  143


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9087  VSLVRP  9104
             VSL RP
Sbjct  138   VSLARP  143


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1745  NSPSEA  1762
             N PSEA
Sbjct  653   NPPSEA  658


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1878  PVSNRA  1861
             P SNRA
Sbjct  734   PASNRA  739


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  856  AENMGI  839
            AEN GI
Sbjct  778  AENKGI  783


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8034  SAKDPF  8017
             SAKD F
Sbjct  839   SAKDSF  844


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2704  LYFCSMLPY  2678
             +Y C  LPY
Sbjct  1104  MYACPKLPY  1112


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5822  PISTPISTSA  5793
             PI  P+ST A
Sbjct  1288  PI--PVSTTA  1295


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2433  SPTSSTV  2413
             SP SS V
Sbjct  213   SPSSSSV  219


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/23 (34%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  1733  GRDNNS--PSEAGADRQGTVSFN  1795
             GR+ N   P       Q T+SF+
Sbjct  245   GRNSNKGLP-------QSTISFD  260


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  3900  LSQLATISF  3874
             L Q  TISF
Sbjct  252   LPQ-STISF  259


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8778  VPVEPDKIEE  8807
             VP E D  EE
Sbjct  424   VPLERDNSEE  433


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  861  SEGATP  878
            SE ATP
Sbjct  656  SEAATP  661


 Score = 15.5 bits (29),  Expect(2) = 28463
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4134  ISPV  4145
             ISPV
Sbjct  783   ISPV  786


 Score = 15.1 bits (28),  Expect(2) = 28463
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4229  ESMNKELKK  4255
             ESM+  L K
Sbjct  813   ESMDQLLNK  821


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -2

Query  1902  SSNTVSS----AP  1876
             SS  VSS    AP
Sbjct  215   SSSSVSSSSATAP  227


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2787  VMNSIL  2804
             +M SIL
Sbjct  324   IMESIL  329


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             PS PPS
Sbjct  585   PSRPPS  590


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -3

Query  5360  SSNAYSAMSTPNS  5322
             SSN  S  S PNS
Sbjct  849   SSNCTSGSSKPNS  861


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 14/32 (43%)
 Frame = +2

Query  8906  PSISS---------RGPRAAS-GVLQELLTSS  8971
             PSIS          RGP   S GV Q   TSS
Sbjct  862   PSISPSILSNTEHKRGPEVTSQGV-Q---TSS  889


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = +2

Query  7043  NMWQKVGKAMYAPPIS  7090
             NM       MY  P+S
Sbjct  967   NM-------MYPVPVS  975


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -3

Query  4862  LFP-PFYGDSLTQMPV  4818
             L+P P     +T MPV
Sbjct  981   LYPIP-----MTPMPV  991


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 10/18 (55%)
 Frame = +3

Query  1056  STLQEQIGWMTNNPPIPV  1109
             S LQ          PIPV
Sbjct  1284  SALQ----------PIPV  1291


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7172  FRPG  7183
             FRPG
Sbjct  87    FRPG  90


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4712  MSIKP  4698
             MS KP
Sbjct  161   MSLKP  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5359  DRGEQE  5376
             DR E+E
Sbjct  464   DRSEEE  469


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7851  PTKPP  7837
             PT PP
Sbjct  581   PTRPP  585


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8903  PPSISSRGP  8929
             PPS  SR P
Sbjct  588   PPSRPSRPP  596


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2684  QHRTKIEEL  2710
             +HR  I++L
Sbjct  789   EHRKQIDDL  797


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7572  FPEQP  7558
             FP QP
Sbjct  1046  FPNQP  1050


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3303  VHHVSH  3286
             V+HV H
Sbjct  1052  VQHVPH  1057


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1562  PRGPAI  1545
             PR PA+
Sbjct  8     PRSPAV  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5824  APSPPPS  5804
             APSP  S
Sbjct  211   APSPSSS  217


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4386  IMSTIL  4369
             IM  IL
Sbjct  324   IMESIL  329


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6599  FTDNA  6613
             FTD A
Sbjct  353   FTDSA  357


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8627  GTGRANS  8647
             G GR NS
Sbjct  507   GSGRQNS  513


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7391  PVPSAS  7374
             P+P AS
Sbjct  723   PIPAAS  728


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7807  QPICY  7793
             QP+C+
Sbjct  960   QPVCF  964


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  2295  SFFFMANTGVL  2263
             SF+F   TG L
Sbjct  1119  SFYFAISTGSL  1129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4788  LLLP  4777
             LLLP
Sbjct  107   LLLP  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  4539  LLSCITTAPSP  4507
             LL     APSP
Sbjct  204   LLASPAAAPSP  214


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -2

Query  3438  LLAAPST*KVSAP  3400
             LLA P      AP
Sbjct  204   LLASPA----AAP  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3877  RNSSQ  3891
             RNSS+
Sbjct  476   RNSSE  480


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5116  PRRPR  5130
             PR PR
Sbjct  690   PRSPR  694


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9042  LATPQ  9028
             LA PQ
Sbjct  707   LASPQ  711


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7852  FKNSF  7866
             FKN F
Sbjct  800   FKNDF  804


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3868  SSKRNS  3885
             SSK NS
Sbjct  856   SSKPNS  861


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4801  CIQEKE  4818
             C QEK+
Sbjct  892   CKQEKD  897


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             PT P PQ
Sbjct  935   PTSPRPQ  941


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4830  PNASL  4816
             PNA L
Sbjct  1136  PNATL  1140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1083  MTNNPP  1100
             MT  PP
Sbjct  1269  MTTQPP  1274


>pdb|2Z65|C  Chain C, Crystal Structure Of The Human Tlr4 Tv3 Hybrid-Md-2-Eritoran 
Complex
 pdb|2Z65|D  Chain D, Crystal Structure Of The Human Tlr4 Tv3 Hybrid-Md-2-Eritoran 
Complex
Length=140


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 6/23 (26%)
 Frame = -2

Query  6891  CV--TISGSPPED---CLKIIVL  6838
             CV   ISGS PE+   CL  ++L
Sbjct  115   CVVEAISGS-PEEMLFCLEFVIL  136


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  6745  ISYFSYCNK  6719
             ISY  YC+K
Sbjct  14    ISY-TYCDK  21


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6088  LMHLFY  6071
             L+H FY
Sbjct  42    LLHIFY  47


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6288  YSFC  6277
             YSFC
Sbjct  84    YSFC  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2627  CLDFV  2613
             CL+FV
Sbjct  130   CLEFV  134


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5856  LQIINIPR  5833
             L+I  IPR
Sbjct  43    LHIFYIPR  50


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  430  FNLY  419
            FNLY
Sbjct  58   FNLY  61


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1781  TVSFNF  1798
             T+SF F
Sbjct  98    TISFSF  103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             Y YCD
Sbjct  16    YTYCD  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7803  QFVMLNQ  7783
             +FV L Q
Sbjct  132   EFVILHQ  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3885  TISF  3874
             TISF
Sbjct  98    TISF  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4805  MQTPI  4791
             MQ PI
Sbjct  22    MQYPI  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  845  HVFSIIRR  868
            H+F I RR
Sbjct  44   HIFYIPRR  51


>pdb|2PYF|A  Chain A, Crystal Structures Of High Affinity Human T-Cell Receptors 
Bound To Pmhc Revealnative Diagonal Binding Geometry 
Unbound Tcr Clone 5-1
Length=205


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  7092  PLMGGAYIAFPTF  7054
             PL+ G YI  PTF
Sbjct  94    PLLDGTYI--PTF  104


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  117   QNPDPAVYQ  125


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  179   WSNKS  183


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  4923  DC-FSDSAI  4946
             +C F DSAI
Sbjct  22    NCSFTDSAI  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  635  FRQDRG  652
            FRQD G
Sbjct  36   FRQDPG  41


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4880  YLCAI  4866
             YLCA+
Sbjct  88    YLCAV  92


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8784  LVLACS  8767
             LVL CS
Sbjct  19    LVLNCS  24


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -3

Query  3560  NPAK-LDKLLVTQSS  3519
             +P K L  LL  QSS
Sbjct  39    DPGKGLTSLLLIQSS  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5342  AMSTPNSEN  5316
             A+S P  EN
Sbjct  10    ALSVPEGEN  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6599  FTDNA  6613
             FTD A
Sbjct  25    FTDSA  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5458  YNSNWYKQ  5435
             YN  W+ Q
Sbjct  31    YNLQWFRQ  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2126  LLVQS  2112
             LL+QS
Sbjct  48    LLIQS  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  135   SVCLF  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  685  KQQLTQ  702
            KQ+ TQ
Sbjct  1    KQEVTQ  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  125   QLRDSKSSD  133


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  180   SNKSDFAC  187


>pdb|2PYE|D  Chain D, Crystal Structures Of High Affinity Human T-Cell Receptors 
Bound To Pmhc Revealnative Diagonal Binding Geometry 
Tcr Clone C5c1 Complexed With Mhc
Length=195


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  7092  PLMGGAYIAFPTF  7054
             PL+ G YI  PTF
Sbjct  95    PLLDGTYI--PTF  105


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  118   QNPDPAVYQ  126


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  180   WSNKS  184


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  4923  DC-FSDSAI  4946
             +C F DSAI
Sbjct  23    NCSFTDSAI  31


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  635  FRQDRG  652
            FRQD G
Sbjct  37   FRQDPG  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4880  YLCAI  4866
             YLCA+
Sbjct  89    YLCAV  93


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8784  LVLACS  8767
             LVL CS
Sbjct  20    LVLNCS  25


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -3

Query  3560  NPAK-LDKLLVTQSS  3519
             +P K L  LL  QSS
Sbjct  40    DPGKGLTSLLLIQSS  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5342  AMSTPNSEN  5316
             A+S P  EN
Sbjct  11    ALSVPEGEN  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6599  FTDNA  6613
             FTD A
Sbjct  26    FTDSA  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5458  YNSNWYKQ  5435
             YN  W+ Q
Sbjct  32    YNLQWFRQ  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2126  LLVQS  2112
             LL+QS
Sbjct  49    LLIQS  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  136   SVCLF  140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  685  KQQLTQ  702
            KQ+ TQ
Sbjct  2    KQEVTQ  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  126   QLRDSKSSD  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  181   SNKSDFAC  188


>pdb|2P5W|D  Chain D, Crystal Structures Of High Affinity Human T-Cell Receptors 
Bound To Pmhc Reveal Native Diagonal Binding Geometry
Length=192


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  7092  PLMGGAYIAFPTF  7054
             PL+ G YI  PTF
Sbjct  94    PLLDGTYI--PTF  104


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  117   QNPDPAVYQ  125


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  179   WSNKS  183


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  4923  DC-FSDSAI  4946
             +C F DSAI
Sbjct  22    NCSFTDSAI  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  685  KQQLTQ  702
            KQQ TQ
Sbjct  1    KQQVTQ  6


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  635  FRQDRG  652
            FRQD G
Sbjct  36   FRQDPG  41


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4880  YLCAI  4866
             YLCA+
Sbjct  88    YLCAV  92


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8784  LVLACS  8767
             LVL CS
Sbjct  19    LVLNCS  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7266  PRQREE  7283
             P QRE+
Sbjct  52    PWQREQ  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5342  AMSTPNSEN  5316
             A+S P  EN
Sbjct  10    ALSVPEGEN  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6599  FTDNA  6613
             FTD A
Sbjct  25    FTDSA  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5458  YNSNWYKQ  5435
             YN  W+ Q
Sbjct  31    YNLQWFRQ  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  135   SVCLF  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  125   QLRDSKSSD  133


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  180   SNKSDFAC  187


>pdb|2P5E|D  Chain D, Crystal Structures Of High Affinity Human T-Cell Receptors 
Bound To Pmhc Reveal Native Diagonal Binding Geometry
Length=195


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  7092  PLMGGAYIAFPTF  7054
             PL+ G YI  PTF
Sbjct  95    PLLDGTYI--PTF  105


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  118   QNPDPAVYQ  126


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  180   WSNKS  184


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  4923  DC-FSDSAI  4946
             +C F DSAI
Sbjct  23    NCSFTDSAI  31


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  635  FRQDRG  652
            FRQD G
Sbjct  37   FRQDPG  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4880  YLCAI  4866
             YLCA+
Sbjct  89    YLCAV  93


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8784  LVLACS  8767
             LVL CS
Sbjct  20    LVLNCS  25


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7266  PRQREE  7283
             P QRE+
Sbjct  53    PWQREQ  58


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5342  AMSTPNSEN  5316
             A+S P  EN
Sbjct  11    ALSVPEGEN  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6599  FTDNA  6613
             FTD A
Sbjct  26    FTDSA  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5458  YNSNWYKQ  5435
             YN  W+ Q
Sbjct  32    YNLQWFRQ  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  136   SVCLF  140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  685  KQQLTQ  702
            KQ+ TQ
Sbjct  2    KQEVTQ  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  126   QLRDSKSSD  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  181   SNKSDFAC  188


>pdb|2OZ4|A  Chain A, Structural Plasticity In Igsf Domain 4 Of Icam-1 Mediates 
Cell Surface Dimerization
Length=265


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4743  SE--VHIPLGDARL---VITTY  4793
             SE  VH  LGD RL   V  TY
Sbjct  34    SEAQVHLALGDQRLNPTV--TY  53


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4887  ELADQLIH  4910
             E A QLIH
Sbjct  164   EVAGQLIH  171


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5575  LDESDC  5558
             LDE DC
Sbjct  186   LDERDC  191


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6867  EGTQKL  6884
             EGTQ L
Sbjct  71    EGTQRL  76


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1027  QGEVT  1041
             QGEVT
Sbjct  251   QGEVT  255


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5120  EDQGPQR  5140
             ED+G QR
Sbjct  69    EDEGTQR  75


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  555  ELRSLY  572
            ELR LY
Sbjct  177  ELRVLY  182


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  909  PLCLAW  892
            P+C AW
Sbjct  205  PMCQAW  210


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  987  LDALYPI  967
            LD L+P+
Sbjct  27   LDGLFPV  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1098  PIPVGE  1115
             P P+GE
Sbjct  226   PLPIGE  231


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  768  QAISPRTL  791
            Q +SPR L
Sbjct  8    QLVSPRVL  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8234  VAEGTD  8251
             V EGT+
Sbjct  110   VSEGTE  115


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4400  QTKEL  4414
             QT EL
Sbjct  174   QTREL  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1525  LPQLK  1511
             LP+LK
Sbjct  214   LPELK  218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6690  SVSREDQG  6713
             SV  ED+G
Sbjct  65    SVTAEDEG  72


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6542  QLLL  6553
             QLLL
Sbjct  143   QLLL  146


>ref|NP_056179.2|  lymphocyte antigen 96 precursor [Homo sapiens]
 sp|Q9Y6Y9.2|LY96_HUMAN  RecName: Full=Lymphocyte antigen 96; Short=Ly-96; AltName: Full=Protein 
MD-2; AltName: Full=ESOP-1; Flags: Precursor
Length=160

 GENE ID: 23643 LY96 | lymphocyte antigen 96 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 6/23 (26%)
 Frame = -2

Query  6891  CV--TISGSPPED---CLKIIVL  6838
             CV   ISGS PE+   CL  ++L
Sbjct  133   CVVEAISGS-PEEMLFCLEFVIL  154


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  6745  ISYFSYCNK  6719
             ISY  YC+K
Sbjct  32    ISY-TYCDK  39


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  4263  PIIFFNSLF  4237
             P  FF  LF
Sbjct  3     PFLFFSTLF  11


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6088  LMHLFY  6071
             L+H FY
Sbjct  60    LLHIFY  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6288  YSFC  6277
             YSFC
Sbjct  102   YSFC  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2627  CLDFV  2613
             CL+FV
Sbjct  148   CLEFV  152


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5856  LQIINIPR  5833
             L+I  IPR
Sbjct  61    LHIFYIPR  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  430  FNLY  419
            FNLY
Sbjct  76   FNLY  79


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1781  TVSFNF  1798
             T+SF F
Sbjct  116   TISFSF  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2440  FFSSL  2454
             FFS L
Sbjct  6     FFSTL  10


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             Y YCD
Sbjct  34    YTYCD  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7803  QFVMLNQ  7783
             +FV L Q
Sbjct  150   EFVILHQ  156


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3885  TISF  3874
             TISF
Sbjct  116   TISF  119


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4805  MQTPI  4791
             MQ PI
Sbjct  40    MQYPI  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  845  HVFSIIRR  868
            H+F I RR
Sbjct  62   HIFYIPRR  69


>ref|NP_001164630.1|  sialic acid-binding Ig-like lectin 10 isoform 5 precursor [Homo 
sapiens]
Length=544

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4943  YKKGLIRT  4966
             YKKGLI T
Sbjct  386   YKKGLIST  393


 Score = 21.8 bits (44),  Expect =   981
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -3

Query  239  CVERAPL----VSLSLS  201
            C  R PL    VSLSLS
Sbjct  367  CHARHPLGSQHVSLSLS  383


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  7906  ISLPNSIHYRK  7874
             +SL  S+HY K
Sbjct  378   VSLSLSVHYKK  388


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  501   QAPESQESQ------------EEL  512


 Score = 17.2 bits (33),  Expect(2) = 11663
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  523  RPRPEAR  529


 Score = 16.3 bits (31),  Expect(2) = 11663
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  494  PEPKSSTQAPESQ  506


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  166   VSAQRTVRLR  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  166  VSAQRTVRLR  175


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  8473  VIAPCFSRSRDAAPTL  8426
             VI    S SRD  P L
Sbjct  184   VI----SISRDNTPAL  195


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  341   LSPSQPS  347


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  378   VSLSLS  383


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  429   ETPRPRFS  436


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  213   FLRLLC  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  175   RVAYAPRDL  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  341   LSPSQPSDP  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  425  RTQTETP-----RPRFSRHS  439


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  431   PRPR  434


 Score = 15.5 bits (29),  Expect(2) = 41670
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  390   LISTAF  395


 Score = 15.1 bits (28),  Expect(2) = 41670
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5912  LPSTQVPH  5889
             LP  QV H
Sbjct  354   LPRVQVEH  361


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  169   QRTVRLRV  176


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  319   CLVCVTHSSP  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  5379  HFLLSSVE*RLFCYVDTQ  5326
             +FL      RL C  D Q
Sbjct  212   QFL------RLLCAADSQ  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  216   LLCAADSQPP  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVL S
Sbjct  234   NRVLSS  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  306   NGTSLPV  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4737  FLDEGF  4720
             F+++GF
Sbjct  130   FMNDGF  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6855  LKIIVLLF  6832
             LK+ VL F
Sbjct  137   LKVTVLSF  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3731  HFLQFLC  3711
             +FL  LC
Sbjct  212   QFLRLLC  218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  236   VLSSSH  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  322   CVTHS  326


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  348  DPGVLE  353


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  462   ATPN  465


>ref|NP_001164627.1|  sialic acid-binding Ig-like lectin 10 isoform 2 precursor [Homo 
sapiens]
Length=639

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +3

Query  2466  SGSILHLP  2489
             SGSIL+LP
Sbjct  473   SGSILQLP  480


 Score = 23.1 bits (47),  Expect =   406
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 13/30 (43%)
 Frame = -3

Query  239  CVERAPL----VSLSLS--------GP-CS  189
            C  R PL    VSLSLS        GP CS
Sbjct  367  CHARHPLGSQHVSLSLSVHYSPKLLGPSCS  396


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4946  KKGLIRT  4966
             KKGLI T
Sbjct  482   KKGLIST  488


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  969  ILQLP  955
            ILQLP
Sbjct  476  ILQLP  480


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  596   QAPESQESQ------------EEL  607


 Score = 17.2 bits (33),  Expect(2) = 11035
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  618  RPRPEAR  624


 Score = 16.3 bits (31),  Expect(2) = 11035
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  589  PEPKSSTQAPESQ  601


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  166   VSAQRTVRLR  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  166  VSAQRTVRLR  175


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  8473  VIAPCFSRSRDAAPTL  8426
             VI    S SRD  P L
Sbjct  184   VI----SISRDNTPAL  195


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  341   LSPSQPS  347


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  378   VSLSLS  383


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  524   ETPRPRFS  531


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  213   FLRLLC  218


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7906  ISLPNSIHY  7880
             +SL  S+HY
Sbjct  378   VSLSLSVHY  386


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  175   RVAYAPRDL  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  341   LSPSQPSDP  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  3948  GLQSTCPCMASP  3913
             GL+  C   ASP
Sbjct  401   GLHCSCSSQASP  412


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  520  RTQTETP-----RPRFSRHS  534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  526   PRPR  529


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  169   QRTVRLRV  176


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  319   CLVCVTHSSP  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  5379  HFLLSSVE*RLFCYVDTQ  5326
             +FL      RL C  D Q
Sbjct  212   QFL------RLLCAADSQ  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  216   LLCAADSQPP  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVL S
Sbjct  234   NRVLSS  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  306   NGTSLPV  312


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4737  FLDEGF  4720
             F+++GF
Sbjct  130   FMNDGF  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6855  LKIIVLLF  6832
             LK+ VL F
Sbjct  137   LKVTVLSF  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3731  HFLQFLC  3711
             +FL  LC
Sbjct  212   QFLRLLC  218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  236   VLSSSH  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  322   CVTHS  326


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  348  DPGVLE  353


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  485   LISTAF  490


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  557   ATPN  560


>ref|NP_037456.5|  cytokine-inducible SH2-containing protein isoform 1 [Homo sapiens]
Length=275

 GENE ID: 1154 CISH | cytokine inducible SH2-containing protein [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1085  HPSYLF  1068
             HPSYLF
Sbjct  128   HPSYLF  133


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  3459  AFPNLVSL  3436
             AFP+ VSL
Sbjct  169   AFPDVVSL  176


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -1

Query  5839  PKEHGAPS------PPP  5807
             PKE  APS      PPP
Sbjct  204   PKE-DAPSDPALPAPPP  219


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7511  LAVER  7525
             LAVER
Sbjct  29    LAVER  33


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7448  EAQQHL  7465
             EA QHL
Sbjct  108   EARQHL  113


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9043  PSDPA  9057
             PSDPA
Sbjct  209   PSDPA  213


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  8649  SELALPVPP  8623
             S+ ALP PP
Sbjct  210   SDPALPAPP  218


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3623  PDQSESE  3643
             P Q ESE
Sbjct  68    PAQTESE  74


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7071  CMPLP  7085
             C+PLP
Sbjct  257   CLPLP  261


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7407  DNNCL  7393
             D NCL
Sbjct  158   DSNCL  162


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2368  LNFPEVLS  2345
             L FP+V S
Sbjct  168   LAFPDVVS  175


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  4556  PRRKAKIIRDY  4588
             PRR A   R Y
Sbjct  261   PRRMADYLRQY  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6165  VHFKLTQ  6145
             VH KL Q
Sbjct  223   VHLKLVQ  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1691  TRANSP  1708
             TR +SP
Sbjct  188   TRSDSP  193


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3379  VRERTH  3396
             VR+ TH
Sbjct  123   VRDSTH  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5218  PNPRKMSN  5195
             P PR M +
Sbjct  259   PLPRRMAD  266


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8154  YLRAS  8140
             YLR S
Sbjct  93    YLRES  97


>sp|Q8TCG1.2|CIP2A_HUMAN  RecName: Full=Protein CIP2A; AltName: Full=Cancerous inhibitor 
of PP2A; AltName: Full=p90 autoantigen
Length=905

 GENE ID: 57650 KIAA1524 | KIAA1524 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +2

Query  2177  EEKIKALVEICTEMEKEGK  2233
             EEKIK L     + E E K
Sbjct  812   EEKIKTL-----QKEREDK  825


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  9056  HISSCFLPVLGL  9091
             H SSC   VLGL
Sbjct  276   HFSSCLHQVLGL  287


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/13 (53%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = -2

Query  1146  LIPGLSI-FYKFL  1111
             L+PG+ + FYK L
Sbjct  492   LVPGMEVSFYKIL  504


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 11/34 (32%)
 Frame = +3

Query  3453  EKQDMLLIEE--D---KKLSP*LTQQIRR-LSYK  3536
             E +D    EE  D   K LS   T+QIR  LS K
Sbjct  821   EREDK---EETIDILRKELSR--TEQIRKELSIK  849


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R+EEKE
Sbjct  863   RLEEKE  868


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = -1

Query  8413  SARLILSLTVGHPITLL  8363
             SA LILS      I LL
Sbjct  69    SASLILSI-----IGLL  80


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8761  PKVSGYLT  8738
             PK+  YLT
Sbjct  265   PKIADYLT  272


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  4479  GKDQQSSSGKV  4511
             GKD  SSS KV
Sbjct  290   GKDPDSSS-KV  299


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  1758  KQEPID---KEL  1784
             K+E ID   KEL
Sbjct  825   KEETIDILRKEL  836


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2799  ILING  2813
             ILING
Sbjct  241   ILING  245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  7214  HFSNCPSYLLLQV  7176
             HFS C    L QV
Sbjct  276   HFSSC----LHQV  284


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
 Frame = -2

Query  5970  LCTSVSYALASDAQNR  5923
             L T   +AL SD  NR
Sbjct  509   LITPLAFALTSD--NR  522


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7436  ANCSAA  7419
             ANCS A
Sbjct  377   ANCSSA  382


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +3

Query  483  LLETSEGCRQILGQLQ  530
            LL T      IL QLQ
Sbjct  389  LLPT------ILDQLQ  398


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 21/37 (56%)
 Frame = +3

Query  738  VQNIQGQMV---------HQAISPRTLNAWVKVVEEK  821
            VQN   Q+V         HQ     T     KV EEK
Sbjct  790  VQN---QLVDREHKLANLHQ----KT-----KVQEEK  814


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7779  HKLAHL  7762
             HKLA L
Sbjct  799   HKLANL  804


 Score = 17.6 bits (34),  Expect(2) = 11666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8374  ITLLFDH  8354
             IT L DH
Sbjct  144   ITFLIDH  150


 Score = 15.5 bits (29),  Expect(2) = 11666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8328  LSKPCLILL  8302
             L  PCL LL
Sbjct  158   LKMPCLGLL  166


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5320  SELGVDI  5340
             S+L VDI
Sbjct  81    SQLAVDI  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  5555  RTVRLIKLLYQSS  5593
             RT  LI LL +SS
Sbjct  191   RT--LITLLAHSS  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8078  RLRDLL  8095
             RL DLL
Sbjct  639   RLQDLL  644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6613  SIVREIDRSN  6584
             S  RE++R N
Sbjct  677   SMLREVERKN  686


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = -1

Query  7198  PHISSSRSEDLGLIVAI  7148
             P IS S      LI  I
Sbjct  66    PNISAS------LILSI  76


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8825  VLSFIGL  8805
             +LS IGL
Sbjct  73    ILSIIGL  79


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -2

Query  3240  ITMLS-----VVIF  3214
             IT+L      VV+F
Sbjct  194   ITLLAHSSLTVVVF  207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  945  TINEEAAE  968
            T NEE  E
Sbjct  216  TLNEEVGE  223


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1150  LFNPRIIH  1127
             LF  R IH
Sbjct  225   LFHARNIH  232


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/16 (37%), Positives = 6/16 (37%), Gaps = 8/16 (50%)
 Frame = +1

Query  4084  ISRKMASKNNTY*QWQ  4131
             I RKM         WQ
Sbjct  564   IPRKMP--------WQ  571


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  517  WDSYNHPF  540
            W S NH F
Sbjct  570  WQSSNHSF  577


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 21/47 (44%)
 Frame = +2

Query  4226  VESMNKE----LKKIIGQV---RDQA--EHLKTAVQMAVFIHNFKRK  4339
             VE  N E    LK    QV   R Q   EHL        F HN  RK
Sbjct  682   VERKNEELSVLLK--AQQVESERAQSDIEHL--------FQHN--RK  716


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/35 (28%), Positives = 12/35 (34%), Gaps = 13/35 (37%)
 Frame = +2

Query  4373  IVDIIATDIQTKELQKQI-------------TKIQ  4438
             I   I  + Q KE Q Q              TK+Q
Sbjct  777   IAQLIEKEEQRKEVQNQLVDREHKLANLHQKTKVQ  811


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  3429  QLTGRLN*EKQ  3461
             QL GRL  EK+
Sbjct  859   QLEGRLE-EKE  868


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -1

Query  4222  SLTLGIVGNSKFLL  4181
             SL L I+G    LL
Sbjct  71    SLILSIIG----LL  80


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1233  FYKTL  1247
             FY TL
Sbjct  189   FYRTL  193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7439  SANCSAAAL  7413
             S NCS  AL
Sbjct  355   SENCSVLAL  363


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5165  ELLEE  5179
             ELLE+
Sbjct  61    ELLED  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4077  RKYAV  4063
             RKY V
Sbjct  251   RKYSV  255


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6765  TLVEQ  6779
             TL+EQ
Sbjct  447   TLIEQ  451


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6913  FPSTIK  6896
             FP  IK
Sbjct  577   FPTSIK  582


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1582  VERKD  1596
             VERK+
Sbjct  682   VERKN  686


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +3

Query  7272  QREEWCREKKEQ  7307
             Q E   RE KE+
Sbjct  819   QKE---REDKEE  827


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6052  VKIF  6041
             VKIF
Sbjct  131   VKIF  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3035  LVLLESLC  3012
             L LL  LC
Sbjct  163   LGLLANLC  170


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1233  FYKTL  1247
             FYK L
Sbjct  500   FYKIL  504


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5841  IPRSM  5827
             IPR M
Sbjct  564   IPRKM  568


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1143  IPGLSI  1126
             +PGL I
Sbjct  592   VPGLNI  597


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8951  EVLRMQLS  8928
             ++LR +LS
Sbjct  830   DILRKELS  837


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5690  MITMDH  5673
             MI M H
Sbjct  884   MIAMIH  889


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7226  YKVVKIE  7246
             YK VK E
Sbjct  17    YKAVKSE  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6926  NSTQL  6940
             N TQL
Sbjct  25    NATQL  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 9/21 (42%)
 Frame = -1

Query  5050  VINAA---SAKYCRDP--TLL  5003
             VI+AA   SA    D   TLL
Sbjct  373   VIDAANCSSA----DRFVTLL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1679  KIPWPS  1662
             K PW S
Sbjct  567   KMPWQS  572


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8601  DLQLPCKS  8578
             DLQ  C S
Sbjct  747   DLQITCDS  754


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6678  QEKES  6692
             +EKES
Sbjct  865   EEKES  869


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  451  LLAH  440
            LLAH
Sbjct  196  LLAH  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1830  TRGRCQRV  1807
             TR  C+R+
Sbjct  409   TRKKCERI  416


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  302  KILT  313
            KILT
Sbjct  438  KILT  441


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  1323  CK----TILKAL  1346
             CK     ILK L
Sbjct  472   CKLAADVILKTL  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1484  KIASLHH  1464
             K A LH+
Sbjct  800   KLANLHQ  806


>ref|NP_004466.2|  flotillin-2 [Homo sapiens]
Length=428

 GENE ID: 2319 FLOT2 | flotillin 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 22/40 (55%)
 Frame = -3

Query  8714  LIREVALCVVDPQ------------IKDI------LSSLG  8649
             L+REVA     P             IKD+      LSSLG
Sbjct  133   LVREVA----APDVGRMGIEILSFTIKDVYDKVDYLSSLG  168


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1098  VDYLSS  1081
             VDYLSS
Sbjct  161   VDYLSS  166


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5540  DEELIRTVR  5566
             D ELI TVR
Sbjct  279   DKELIATVR  287


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4945  IAESEK  4928
             IAE EK
Sbjct  300   IAEGEK  305


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 7/25 (28%)
 Frame = +2

Query  2180  EKIKA--LVEICTEMEKEGKISKIG  2248
             EK+K   L +   E EK   I KIG
Sbjct  304   EKVKQVLLAQ--AEAEK---IRKIG  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = -3

Query  7715  ILQ-----LRSVL  7692
             +LQ     LRS+L
Sbjct  103   VLQTLEGHLRSIL  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -3

Query  2777  GMEVLS----DVF  2751
             G E+LS    DV+
Sbjct  146   GIEILSFTIKDVY  158


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             V+E M K
Sbjct  329   VIEAMGK  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  2900  DLPNSISPLTSV  2865
             +LP S+  LT V
Sbjct  401   ELPASVHALTGV  412


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6401  QRIPLD  6384
             QRI L+
Sbjct  43    QRISLE  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7442  AIEAQQ  7459
             A+EAQ+
Sbjct  269   AVEAQE  274


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2298  VLNGEN  2315
             VL G+N
Sbjct  383   VLSGDN  388


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3531  YKQFI  3545
             YKQ++
Sbjct  24    YKQYV  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  7149  IATMSPRSSDLE  7184
             I T+ PR  D E
Sbjct  49    IMTLQPRCEDVE  60


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  489  ETSEG  503
            ET EG
Sbjct  60   ETAEG  64


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5853  VVLQ  5864
             VVLQ
Sbjct  102   VVLQ  105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3668  LIKK  3679
             LIKK
Sbjct  419   LIKK  422


>ref|NP_055856.1|  clusterin-associated protein 1 isoform 1 [Homo sapiens]
Length=413

 GENE ID: 23059 CLUAP1 | clusterin associated protein 1 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 6/22 (27%)
 Frame = +2

Query  3077  EIQKQGQGQWTYQIYQEPFKNL  3142
             E QKQ      Y  Y E F NL
Sbjct  251   ELQKQ------YDTYLEKFQNL  266


 Score = 24.0 bits (49),  Expect =   225
 Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 33/65 (50%)
 Frame = +2

Query  7133  TRDGGNSNN-----ESEIFRPGGGDMRDNWRSELYKYKVVKI---------EPLGVAPTK  7270
             T  GG+S++     ESEI      DM D+                      E     PTK
Sbjct  355   TMQGGDSDDNEDSEESEI------DMEDD-------------DDEDDDLEDESISLSPTK  395

Query  7271  AKRRV  7285
               RRV
Sbjct  396   PNRRV  400


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = +1

Query  3082  TEAGARPMDI  3111
             TEA ARP++I
Sbjct  169   TEAIARPLEI  178


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  918  QAAMQML  938
            Q AM+ML
Sbjct  337  QTAMEML  343


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4663  NTICMFQGKL  4692
             NT C+ Q KL
Sbjct  289   NTLCLIQNKL  298


 Score = 20.2 bits (40),  Expect(2) =  1933
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +2

Query  3611  IQAQPDQSESEL  3646
             IQ   D+S+SEL
Sbjct  318   IQED-DESDSEL  328


 Score = 17.2 bits (33),  Expect(2) =  1933
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3471  LIEEDKKL  3494
             L EE+K L
Sbjct  298   LKEEEKRL  305


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  5300  VAEFLLWL  5277
             V E LLWL
Sbjct  35    VSEVLLWL  42


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 19/42 (45%)
 Frame = +2

Query  1853  LKEA---LLDTGADD-------------TVLEEMSLPGRWKP  1930
             LKE    LL  G +D               LEE  LP   KP
Sbjct  298   LKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLP---KP  336


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6635  SAVLLW  6618
             S VLLW
Sbjct  36    SEVLLW  41


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 7/21 (33%)
 Frame = +3

Query  606  RIEIKD-------TKEALDKI  647
            RI IK+       TK+ L+ +
Sbjct  186  RIAIKEILTQVQKTKDLLNNV  206


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  7151  SNNESEI  7171
             SN++S+I
Sbjct  310   SNDDSDI  316


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  586  VATVLYN  566
            +  VLYN
Sbjct  100  ITSVLYN  106


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2780  KGME  2769
             KGME
Sbjct  111   KGME  114


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8675  IKDIL  8661
             IK+IL
Sbjct  189   IKEIL  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5783  EKYQHL  5800
             EK+Q L
Sbjct  261   EKFQNL  266


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4532  DNSDI  4546
             D+SDI
Sbjct  312   DDSDI  316


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  5516  MAGRSGDSDE  5545
             M G  GDSD+
Sbjct  356   MQG--GDSDD  363


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  552  EELRSLYNT  578
            EEL   Y+T
Sbjct  250  EELQKQYDT  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  8397  RMRRAEP  8417
             R R  EP
Sbjct  399   RVRKSEP  405


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4860  KRYSTQVD  4883
             KRY  Q D
Sbjct  44    KRYEPQTD  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5348  YSAMST  5331
             Y AM T
Sbjct  105   YNAMKT  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6110  QSLKPC  6127
             QS  PC
Sbjct  235   QSVRPC  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2232  KFQKL  2246
             KFQ L
Sbjct  262   KFQNL  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8326  FQALSY  8309
             FQ L Y
Sbjct  263   FQNLTY  268


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8802  LSYLAQ  8785
             L YL Q
Sbjct  266   LTYLEQ  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2386  RRVKK  2400
             RRV K
Sbjct  398   RRVRK  402


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6474  EQDHV  6488
             EQD V
Sbjct  59    EQDRV  63


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4241  KELKKI  4258
             KEL KI
Sbjct  95    KELLKI  100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2274  TGVLY  2260
             T VLY
Sbjct  101   TSVLY  105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2746  RQKTSERTS  2772
             RQ  SE TS
Sbjct  141   RQLASEITS  149


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  3945  LQSTCPC-M  3922
             LQS  PC M
Sbjct  234   LQSVRPCFM  242


>gb|AAT80894.1|  placenta cross-immune reaction antigen [Homo sapiens]
Length=113


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +2

Query  7271  AKRRVV----QREK-RA  7306
             A RRV     QREK RA
Sbjct  38    ARRRVLSLENQREKHRA  54


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7486  HQAAPG  7503
             H AAPG
Sbjct  52    HRAAPG  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7703  RSVLSL  7686
             R VLSL
Sbjct  40    RRVLSL  45


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +1

Query  8029  GTYLGRSAEPVP  8064
             G YL R   P P
Sbjct  21    GSYLSR---PTP  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  297  VLTSRR  280
            VL  RR
Sbjct  35   VLSARR  40


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -1

Query  8443  DAAPTLSAAGSAR  8405
             DAA    AA  AR
Sbjct  87    DAAAAVAAA--AR  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3728  FLQFL  3714
             FL FL
Sbjct  8     FLPFL  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3901  MSAKRR  3918
             +SA RR
Sbjct  36    LSARRR  41


>ref|NP_067081.2|  interleukin-22 receptor subunit alpha-1 precursor [Homo sapiens]
 sp|Q8N6P7.1|I22R1_HUMAN  RecName: Full=Interleukin-22 receptor subunit alpha-1; Short=IL-22 
receptor subunit alpha-1; Short=IL-22R-alpha-1; Short=IL-22RA1; 
AltName: Full=Cytokine receptor family 2 member 9; 
Short=CRF2-9; AltName: Full=Cytokine receptor class-II member 
9; AltName: Full=ZcytoR11; Flags: Precursor
Length=574

 GENE ID: 58985 IL22RA1 | interleukin 22 receptor, alpha 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 10/29 (34%)
 Frame = +2

Query  5117  PEDQGPQREPHNEWTLELLEEL---KNEA  5194
             P DQGP       W   LLE L   K+EA
Sbjct  522   PSDQGP-----SPW--GLLESLVCPKDEA  543


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +3

Query  4788  TYWGLHTGERDW  4823
             TY     GERDW
Sbjct  59    TY-----GERDW  65


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  6269  GKVQKEYAFF  6298
             GK Q EY FF
Sbjct  181   GK-QREYEFF  189


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -1

Query  517  SICLQPSDV  491
            SI LQPS+V
Sbjct  333  SI-LQPSNV  340


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = -2

Query  8724  CSSANQGS-------SLVC  8689
             CS  +QG        SLVC
Sbjct  520   CSPSDQGPSPWGLLESLVC  538


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = -3

Query  335  LSPSSLR*SKFLAYSPVAAP  276
            LSP        L Y P AAP
Sbjct  346  LSP--------LSYAPNAAP  357


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2731  PPQQMLSQLLY  2699
             PP Q LS L Y
Sbjct  341   PPPQILSPLSY  351


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3377  QLEKEP  3394
             QL+KEP
Sbjct  430   QLQKEP  435


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1042  MSLPL  1028
             MSLPL
Sbjct  509   MSLPL  513


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = +2

Query  9077  PVLGLSG*TRSEPGSSLA  9130
             PV  LSG     P SSLA
Sbjct  285   PVFDLSG-----P-SSLA  296


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  770  LMYHLPLDV  744
            L YHL L V
Sbjct  163  LFYHLELQV  171


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7819  FYIPQPI  7799
             FY PQ I
Sbjct  376   FYAPQAI  382


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6079  LFYH  6068
             LFYH
Sbjct  163   LFYH  166


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3355  SLSEI  3369
             SLSEI
Sbjct  320   SLSEI  324


 Score = 16.3 bits (31),  Expect(2) = 16724
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5111  QAPED  5125
             +APED
Sbjct  16    HAPED  20


 Score = 16.3 bits (31),  Expect(2) = 16724
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5243  YETYGD  5260
             Y TYG+
Sbjct  57    YKTYGE  62


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8461  MEQSQ  8475
             ME+SQ
Sbjct  455   MEESQ  459


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5373  LLSSVE  5356
             LLSSV+
Sbjct  498   LLSSVQ  503


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -2

Query  7584  VQ-----MSFPEQPQIP-RSC  7540
             VQ     MS P QP  P R C
Sbjct  502   VQIEGHPMSLPLQP--PSRPC  520


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5914  CFLPHRY  5894
             C+L  RY
Sbjct  247   CYLSYRY  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1196  LSYVQNA  1176
             LSY  NA
Sbjct  349   LSYAPNA  355


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5893  GTCVEGS  5913
             G C EGS
Sbjct  404   GVCMEGS  410


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1625  LSLSTIFH  1602
             L L  IFH
Sbjct  154   LTLEDIFH  161


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  4497  SFAGPFQ-S-GFL  4465
             SF G F  S GFL
Sbjct  230   SFSGAFLFSMGFL  242


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = -2

Query  2226  SFSISVQISTNAFIFS  2179
             SFS        AF FS
Sbjct  230   SFS-------GAFLFS  238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4374  ILSPALYPP  4348
             ILSP  Y P
Sbjct  345   ILSPLSYAP  353


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9039  ATPQSRP  9019
             ATP S P
Sbjct  394   ATPDSWP  400


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5411  SIQEV-SL  5431
             S QEV SL
Sbjct  446   SLQEVTSL  453


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5487  TNLAM  5473
             T LAM
Sbjct  451   TSLAM  455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  901  FSMVF  887
            FSM F
Sbjct  237  FSMGF  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4800  DPNML  4786
             DPN L
Sbjct  477   DPNVL  481


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  7526  YLKDQ-QLL  7549
             YLK Q  LL
Sbjct  491   YLKGQLPLL  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7173  SDLEE  7187
             SDLE+
Sbjct  551   SDLEQ  555


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3368  LWYQLE  3385
             L Y+LE
Sbjct  163   LFYHLE  168


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6387  QRYPLSQFPY  6416
             QR  LS+  Y
Sbjct  317   QRHSLSEITY  326


>ref|NP_149121.2|  sialic acid-binding Ig-like lectin 10 isoform 1 precursor [Homo 
sapiens]
 sp|Q96LC7.3|SIG10_HUMAN  RecName: Full=Sialic acid-binding Ig-like lectin 10; Short=Siglec-10; 
AltName: Full=Siglec-like protein 2; Flags: Precursor
 gb|AAM83254.1|AF301007_1  sialic acid-binding immunoglobin-like lectin 10 [Homo sapiens]
Length=697

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +3

Query  2466  SGSILHLP  2489
             SGSIL+LP
Sbjct  531   SGSILQLP  538


 Score = 23.1 bits (47),  Expect =   406
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 13/30 (43%)
 Frame = -3

Query  239  CVERAPL----VSLSLS--------GP-CS  189
            C  R PL    VSLSLS        GP CS
Sbjct  425  CHARHPLGSQHVSLSLSVHYSPKLLGPSCS  454


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4946  KKGLIRT  4966
             KKGLI T
Sbjct  540   KKGLIST  546


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  969  ILQLP  955
            ILQLP
Sbjct  534  ILQLP  538


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  654   QAPESQESQ------------EEL  665


 Score = 17.2 bits (33),  Expect(2) = 10688
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  676  RPRPEAR  682


 Score = 16.3 bits (31),  Expect(2) = 10688
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  647  PEPKSSTQAPESQ  659


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  224   VSAQRTVRLR  233


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  224  VSAQRTVRLR  233


 Score = 17.2 bits (33),  Expect(2) = 15511
 Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 11/24 (45%)
 Frame = -2

Query  4737  FLDEGF---------HSDVYKTIP  4693
             F+++GF           DVY  IP
Sbjct  130   FMNDGFFLKVTALTQKPDVY--IP  151


 Score = 15.5 bits (29),  Expect(2) = 15511
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4700  PSPSF  4686
             P PSF
Sbjct  174   PPPSF  178


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  8473  VIAPCFSRSRDAAPTL  8426
             VI    S SRD  P L
Sbjct  242   VI----SISRDNTPAL  253


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  399   LSPSQPS  405


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  436   VSLSLS  441


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  582   ETPRPRFS  589


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  271   FLRLLC  276


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7906  ISLPNSIHY  7880
             +SL  S+HY
Sbjct  436   VSLSLSVHY  444


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  233   RVAYAPRDL  241


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  399   LSPSQPSDP  407


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  3948  GLQSTCPCMASP  3913
             GL+  C   ASP
Sbjct  459   GLHCSCSSQASP  470


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  578  RTQTETP-----RPRFSRHS  592


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  584   PRPR  587


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  227   QRTVRLRV  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  377   CLVCVTHSSP  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  5379  HFLLSSVE*RLFCYVDTQ  5326
             +FL      RL C  D Q
Sbjct  270   QFL------RLLCAADSQ  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  274   LLCAADSQPP  283


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVL S
Sbjct  292   NRVLSS  297


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  364   NGTSLPV  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8825  VLSF  8814
             VLSF
Sbjct  199   VLSF  202


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3731  HFLQFLC  3711
             +FL  LC
Sbjct  270   QFLRLLC  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  294   VLSSSH  299


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  380   CVTHS  384


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  406  DPGVLE  411


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  543   LISTAF  548


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  615   ATPN  618


>ref|NP_002595.1|  high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A 
isoform b [Homo sapiens]
Length=424

 GENE ID: 5150 PDE7A | phosphodiesterase 7A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  6502  CADIC----TW  6482
             CADIC    TW
Sbjct  360   CADICNPCRTW  370


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  488  RNIRRL  505
            RNIRRL
Sbjct  106  RNIRRL  111


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6392  PLDRPV  6375
             PLDRPV
Sbjct  11    PLDRPV  16


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -2

Query  8169  RR---FHQYLRAS  8140
             RR   F+ YLR S
Sbjct  109   RRLLSFQRYLRSS  121


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query  6149  HRVGLILHMAL  6117
             HR  L+L+MAL
Sbjct  349   HRH-LVLQMAL  358


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8365  LFDHLP  8348
             LF HLP
Sbjct  298   LFSHLP  303


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4382  IIATDI  4399
             I ATDI
Sbjct  318   ILATDI  323


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3651  LTNSDSL  3631
             LTN +SL
Sbjct  164   LTNGNSL  170


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7602  FQGTAV  7585
             F GTAV
Sbjct  124   FRGTAV  129


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3155  IFLF  3144
             IFLF
Sbjct  158   IFLF  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  7468  ATHSLGHQAAPG  7503
             ATH L H   PG
Sbjct  250   ATHDLDH---PG  258


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PVP  VL
Sbjct  15    PVPQHVL  21


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7505  RILAVERYL  7531
             R L  +RYL
Sbjct  110   RLLSFQRYL  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  3355  SLSEIMVPVRER  3390
             S SEI V V  R
Sbjct  95    SQSEIEVSVSAR  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  743  EHPGAN  760
            +HPG N
Sbjct  255  DHPGVN  260


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 7/19 (36%)
 Frame = -2

Query  4341  PFLLK-------LWMNTAI  4306
             PFL K       L  NT +
Sbjct  262   PFLIKTNHYLATLYKNTSV  280


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8198  SAVSLL  8215
             SAV LL
Sbjct  288   SAVGLL  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7626  RDLLLQLA  7603
             R L LQ+A
Sbjct  350   RHLVLQMA  357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6155  LKCTD  6169
             LKC D
Sbjct  358   LKCAD  362


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3809  HEKYHS  3826
             +E YHS
Sbjct  202   QEDYHS  207


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8625  PFLLK  8611
             PFL K
Sbjct  262   PFLIK  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6038  SHLP  6027
             SHLP
Sbjct  300   SHLP  303


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2728  PQQMLS  2711
             PQ+ LS
Sbjct  17    PQHVLS  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2651  HPCID  2637
             HP ID
Sbjct  85    HPYID  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8365  LFDHL  8351
             LFD L
Sbjct  160   LFDRL  164


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8704  SLISRTTH  8727
             SLI   TH
Sbjct  245   SLIAAATH  252


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6035  VTENF  6049
             VTE F
Sbjct  380   VTEEF  384


>sp|Q9NQ38.2|ISK5_HUMAN  RecName: Full=Serine protease inhibitor Kazal-type 5; AltName: 
Full=Lympho-epithelial Kazal-type-related inhibitor; Short=LEKTI; 
Contains: RecName: Full=Hemofiltrate peptide HF6478; 
Contains: RecName: Full=Hemofiltrate peptide HF7665; Flags: 
Precursor
Length=1064

 GENE ID: 11005 SPINK5 | serine peptidase inhibitor, Kazal type 5 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 13/32 (40%)
 Frame = +2

Query  1640  EDLAFLQGKAREFSSEQ-------TRANSPTR  1714
             EDL       REF S Q       TR N P R
Sbjct  846   EDLC------REFRSMQRNGKLICTRENNPVR  871


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7568  GKLICT  7585
             GKLICT
Sbjct  784   GKLICT  789


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7568  GKLICT  7585
             GKLICT
Sbjct  859   GKLICT  864


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 10/24 (41%)
 Frame = +2

Query  5885  YYGVPVWKEATTTLFCASDAKAYD  5956
             YY      EA     C  D K YD
Sbjct  114   YY------EAV----CGTDGKTYD  127


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2328  ENLIRE  2345
             ENLIR+
Sbjct  1030  ENLIRQ  1035


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +1

Query  2200  RNLYRDGK---GREN  2235
             R L R+GK    REN
Sbjct  371   RKLVRNGKLACTREN  385


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  2730  HLNRCCLSSSIF  2695
             H N C +  SIF
Sbjct  878   HINKCAMCQSIF  889


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  3014  REILKEPVHG  3043
             RE   +PVHG
Sbjct  932   RE--NDPVHG  939


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6209  MIMEK  6223
             MI+EK
Sbjct  68    MILEK  72


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  255  KRARQEAR  278
            KRAR+ AR
Sbjct  78   KRARHLAR  85


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7568  GKLICT  7585
             GKL CT
Sbjct  642   GKLFCT  647


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = -3

Query  6203  Ryyywy*YHSSNQCTL  6156
             R      Y   NQCT+
Sbjct  729   RDADGKSYN--NQCTM  742


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +2

Query  5927  FCASDAKAYDTEVHN  5971
             FC    K Y+ +V N
Sbjct  224   FC----KEYEKQVRN  234


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1244  SKSRASF  1264
             SKS ASF
Sbjct  427   SKSTASF  433


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 10/26 (38%)
 Frame = +1

Query  7273  KEK---SGAERKK-------SSGNRS  7320
             KEK     AE KK         G RS
Sbjct  811   KEKLEREAAEKKKKEDEDRSNTGERS  836


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4205  CREFQ  4191
             C EFQ
Sbjct  30    CHEFQ  34


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6459  IRRSMEQD  6482
             IRR  E D
Sbjct  216   IRRNAEKD  223


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6848  IFKQ  6859
             IFKQ
Sbjct  264   IFKQ  267


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7568  GKLICT  7585
             GKL CT
Sbjct  377   GKLACT  382


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8517  EAQEEE  8534
             +A+EEE
Sbjct  408   QAEEEE  413


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1198  DQRN  1209
             DQRN
Sbjct  686   DQRN  689


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7579  NEFSR  7565
             NE+SR
Sbjct  755   NEYSR  759


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -3

Query  2378  VFLIELPRSLE  2346
             VFL E    LE
Sbjct  955   VFLTE---ALE  962


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1691  TRANSPTR  1714
             TR N P R
Sbjct  312   TRENDPIR  319


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3595  ICIRNH  3612
             IC R H
Sbjct  509   ICTREH  514


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  202  ESERET  219
            E E ET
Sbjct  626  EAEKET  631


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1212  FRDYV  1226
             FR+Y+
Sbjct  919   FRNYI  923


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1486  LKLPLCII  1463
             L L LC I
Sbjct  10    LPLALCLI  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5361  QRRAR  5375
             Q RAR
Sbjct  77    QKRAR  81


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7882  YRKYSKN  7862
             YRK  KN
Sbjct  440   YRKSRKN  446


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8628  GLEGLIH  8648
             GL+G IH
Sbjct  590   GLDGKIH  596


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5302  LLQN  5291
             LLQN
Sbjct  638   LLQN  641


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1691  TRANSPTR  1714
             TR N P R
Sbjct  647   TRENDPVR  654


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = -1

Query  4972  TMCPNKA  4952
             TMC  KA
Sbjct  741   TMC--KA  745


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2216  MEKEGK  2233
             +EKE K
Sbjct  70    LEKEAK  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4472  DFCCP  4458
             DF CP
Sbjct  108   DFICP  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  2724  NRCCLSSSIF  2695
             N C L   IF
Sbjct  256   NKCALCAEIF  265


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5351  RYSTEESK  5374
             R+S E SK
Sbjct  268   RFSEENSK  275


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  2177  EEKIKALV--EI  2206
             EEK K  V  EI
Sbjct  284   EEKTK--VKREI  293


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3014  REILK  3028
             REI K
Sbjct  291   REIVK  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5087  RNTRQ  5073
             RN RQ
Sbjct  422   RNKRQ  426


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2747  DKKHQKE  2767
             +KK  KE
Sbjct  542   EKKNDKE  548


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7339  QEPKE  7325
             QE KE
Sbjct  609   QEAKE  613


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            A VKR+
Sbjct  621  AKVKRE  626


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4557  QEEKQR  4574
             +EE QR
Sbjct  683   EEEDQR  688


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4806  TGER  4817
             TGER
Sbjct  832   TGER  835


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4806  TGER  4817
             TGER
Sbjct  838   TGER  841


>gb|AAH08965.2|  BAZ2A protein [Homo sapiens]
Length=837

 GENE ID: 11176 BAZ2A | bromodomain adjacent to zinc finger domain, 2A
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/8 (75%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = +1

Query  5377  MEPVDPRL  5400
             +EPV+PRL
Sbjct  751   LEPVNPRL  758


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1692  PEPTAPPEE  1718
             P P  PPEE
Sbjct  235   PAPSQPPEE  243


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 9/18 (50%)
 Frame = -1

Query  5824  APSPP---------PSPQ  5798
             AP PP         PSPQ
Sbjct  271   APTPPPAVSEDQPTPSPQ  288


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  8530  RRR-WVFQSHLRYL  8568
             RRR WV    L YL
Sbjct  58    RRRYWV----LPYL  67


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 4/23 (17%)
 Frame = +2

Query  4364  GERIVDIIATDIQTKELQKQITK  4432
             GE  VD  A  I   EL+ QI K
Sbjct  10    GE--VDATASSIP--ELERQIEK  28


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5946  KHMIQRY  5966
             K+M QRY
Sbjct  352   KQMEQRY  358


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5493  YETNLA  5476
             YET+LA
Sbjct  443   YETDLA  448


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7561  TPNPQEL  7541
             TP PQ+L
Sbjct  284   TPSPQQL  290


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  734  RVILADL  714
            RVI+ DL
Sbjct  459  RVIMSDL  465


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1637  REDLAF  1654
             REDLA+
Sbjct  479   REDLAY  484


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3662  EQLIKKE----KV  3688
             E+ IKKE    KV
Sbjct  82    EEVIKKETDSLKV  94


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7784  WFNI  7795
             WFNI
Sbjct  259   WFNI  262


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4312  CHLYC  4298
             CH YC
Sbjct  633   CHIYC  637


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8495  QCCLCL  8512
             Q CLCL
Sbjct  588   QVCLCL  593


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 13/27 (48%)
 Frame = -2

Query  1899  SNTVSSAPVSNRASFSCPPIFIVTRGR  1819
             SNT  S P   RA           RGR
Sbjct  114   SNTTASSPA--RA-----------RGR  127


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9047  EGSPL  9033
             EGSPL
Sbjct  187   EGSPL  191


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  152  GSEGSLV  132
            G EG LV
Sbjct  74   GTEGNLV  80


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  4366  PCTVPPNPP  4340
             PC   P PP
Sbjct  267   PCNAAPTPP  275


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4466  RNPLW  4480
             R PLW
Sbjct  535   REPLW  539


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5824  APSPPP  5807
             APS PP
Sbjct  236   APSQPP  241


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5817  LHPHLHK  5797
             LH HL K
Sbjct  397   LHKHLNK  403


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  6413  W--ELAQRI  6393
             W  EL QR+
Sbjct  452   WVEELEQRV  460


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4524  TTAPSP  4507
             TTA SP
Sbjct  116   TTASSP  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3620  QPDQSES  3640
             +PD+ ES
Sbjct  245   EPDEAES  251


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  2223  FSISVQISTNA  2191
             F IS Q   NA
Sbjct  260   FNISAQMPCNA  270


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  992   CRAYCTRP  1015
             C  YC RP
Sbjct  633   CHIYCHRP  640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -1

Query  9049  LRARHSPVP-PR  9017
             LR R SP   PR
Sbjct  697   LRGRESPAAGPR  708


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  293  SPVAAPR  273
            SP A PR
Sbjct  702  SPAAGPR  708


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = +3

Query  8385  TVRERMRR------AEPAAD  8426
             T RER+ R       E AAD
Sbjct  774   TMRERLLRGGYTSSEEFAAD  793


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6557  GSLAEEEVV  6583
             G L  EEV+
Sbjct  77    GNLVPEEVI  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  522  QLQP  533
            QLQP
Sbjct  156  QLQP  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  9037  HSPVPPRPRL  9008
             H P  P P L
Sbjct  164   HAPAQPQPQL  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +1

Query  166  GKSLAVAPEQGPESERE  216
            GK L  AP Q PE E E
Sbjct  231  GK-LDPAPSQPPE-EPE  245


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7558  PNPQEL  7541
             P+PQ L
Sbjct  253   PDPQAL  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6245  FNIS  6256
             FNIS
Sbjct  260   FNIS  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8455  KNMEQ  8469
             K MEQ
Sbjct  352   KQMEQ  356


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8796  YLAQL  8782
             YL QL
Sbjct  358   YLTQL  362


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  514  ICLQPS  497
            +CL PS
Sbjct  411  VCLRPS  416


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8997  PQRK  8986
             PQRK
Sbjct  507   PQRK  510


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2053  WKKSVD  2070
             W KSV+
Sbjct  602   WEKSVN  607


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3100  PMDIS  3114
             PMD S
Sbjct  769   PMDFS  773


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4371  LSPALY  4354
             L PAL+
Sbjct  100   LNPALF  105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6582  TTSSSAR  6562
             T SS AR
Sbjct  117   TASSPAR  123


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  3602  LGIIQAQPDQSES  3640
             LG  Q Q D S+S
Sbjct  193   LG--QSQHDLSQS  203


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  7272  ALVGATPNG  7246
             AL   TPNG
Sbjct  549   ALL-STPNG  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5339  MSTPN  5325
             +STPN
Sbjct  551   LSTPN  555


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4232  SMNKEL  4249
             SM  EL
Sbjct  106   SMKMEL  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2347  SRLLGSSI  2370
             S LL SS+
Sbjct  216   SSLLSSSV  223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7921  SDPPPNPE  7944
             S PP  PE
Sbjct  238   SQPPEEPE  245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             PT PP
Sbjct  272   PTPPP  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6852  LSNPQE  6869
             LS+ QE
Sbjct  488   LSDSQE  493


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1065  QEQIGW  1082
             QE I W
Sbjct  492   QEDITW  497


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5105  MEQAPE  5122
             ME  PE
Sbjct  642   MEAVPE  647


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8634  EGLIHSQRR  8660
             EGL  S RR
Sbjct  712   EGLSPSKRR  720


>ref|NP_001171744.1|  carcinoembryonic antigen-related cell adhesion molecule 1 isoform 
3 precursor [Homo sapiens]
Length=461

 GENE ID: 634 CEACAM1 | carcinoembryonic antigen-related cell adhesion molecule
1 (biliary glycoprotein) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8957  LLTSSLLQGTFRW  8995
             LLT SLL  TF W
Sbjct  19    LLTASLL--TF-W  28


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8889  TLTLLS  8872
             TLTLLS
Sbjct  199   TLTLLS  204


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  7904  YSPLSFQTHLPT  7939
             YS L F+ + PT
Sbjct  428   YSTLNFEAQQPT  439


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6614  KTIIV  6628
             KTIIV
Sbjct  314   KTIIV  318


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1430  SNEPSNK  1450
             SN+P NK
Sbjct  416   SNDPPNK  422


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4043  PAETGQETAY  4072
             PA  G ET Y
Sbjct  93    PANSGRETIY  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6092  YPHASVL  6072
             YP AS L
Sbjct  102   YPNASLL  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -1

Query  520  PSICLQPSDVSNRPGLTAN  464
            P I   PSD   RPG  AN
Sbjct  240  PTIS--PSDTYYRPG--AN  254


 Score = 17.6 bits (34),  Expect(2) = 18159
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7462  MLLRLNS  7442
             ML RL+S
Sbjct  326   MLPRLDS  332


 Score = 15.1 bits (28),  Expect(2) = 18159
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7549  QELLI  7535
             QEL I
Sbjct  282   QELFI  286


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7669  SVPLHPGRV  7643
             S PLH  RV
Sbjct  5     SAPLHRVRV  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             PV LNV
Sbjct  228   PVTLNV  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4147  STGEIAAIV  4121
             S G IA IV
Sbjct  361   SPGAIAGIV  369


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1296  LLVQN  1310
             LL+QN
Sbjct  107   LLIQN  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  948  INEEA  962
            +NEEA
Sbjct  130  VNEEA  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6554  LTAVELI  6534
             LTA E I
Sbjct  448   LTATEII  454


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3638  SELVNQ  3655
             S+LVN+
Sbjct  127   SDLVNE  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3792  SIPSKNS  3772
             SI S NS
Sbjct  148   SISSNNS  154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND G Y C
Sbjct  208   NDTGPYEC  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8688  GRSTDQ  8671
             GR  DQ
Sbjct  393   GRASDQ  398


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  403   EHKPS  407


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7448  EAQQ  7459
             EAQQ
Sbjct  434   EAQQ  437


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2077  NLSQQ  2063
             NL QQ
Sbjct  57    NLPQQ  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6935  QLFNSTWF  6958
             QLF   W+
Sbjct  61    QLFGYSWY  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2534  NVLPQ  2548
             N LPQ
Sbjct  352   NALPQ  356


>ref|NP_001164628.1|  sialic acid-binding Ig-like lectin 10 isoform 3 precursor [Homo 
sapiens]
Length=602

 GENE ID: 89790 SIGLEC10 | sialic acid binding Ig-like lectin 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4943  YKKGLIRT  4966
             YKKGLI T
Sbjct  444   YKKGLIST  451


 Score = 21.8 bits (44),  Expect =   981
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = -3

Query  239  CVERAPL----VSLSLS  201
            C  R PL    VSLSLS
Sbjct  425  CHARHPLGSQHVSLSLS  441


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  7906  ISLPNSIHYRK  7874
             +SL  S+HY K
Sbjct  436   VSLSLSVHYKK  446


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4273  SYLSYNFL  4250
             SY  YNF+
Sbjct  124   SYVRYNFM  131


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +2

Query  5111  QAPEDQGPQREPHNEWTLELLEEL  5182
             QAPE Q  Q            EEL
Sbjct  559   QAPESQESQ------------EEL  570


 Score = 17.2 bits (33),  Expect(2) = 11271
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  258  RARQEAR  278
            R R EAR
Sbjct  581  RPRPEAR  587


 Score = 16.3 bits (31),  Expect(2) = 11271
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +1

Query  187  PE-----QGPESE  210
            PE     Q PES+
Sbjct  552  PEPKSSTQAPESQ  564


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +1

Query  8950  SRTADIELATRDFPLGTFQ  9006
             SR  ++E+ TR    G FQ
Sbjct  79    SR--EVEMSTR----GRFQ  91


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  224   VSAQRTVRLR  233


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  224  VSAQRTVRLR  233


 Score = 17.2 bits (33),  Expect(2) = 16422
 Identities = 8/24 (33%), Positives = 11/24 (45%), Gaps = 11/24 (45%)
 Frame = -2

Query  4737  FLDEGF---------HSDVYKTIP  4693
             F+++GF           DVY  IP
Sbjct  130   FMNDGFFLKVTALTQKPDVY--IP  151


 Score = 15.5 bits (29),  Expect(2) = 16422
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4700  PSPSF  4686
             P PSF
Sbjct  174   PPPSF  178


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL   PL LSS
Sbjct  2     LL---PLLLSS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  8473  VIAPCFSRSRDAAPTL  8426
             VI    S SRD  P L
Sbjct  242   VI----SISRDNTPAL  253


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8877  LSPGHPS  8857
             LSP +PS
Sbjct  399   LSPSQPS  405


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  436   VSLSLS  441


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4719  ESPHPRIS  4742
             E P PR S
Sbjct  487   ETPRPRFS  494


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3077  LLLSLLMG  3054
             LLLS L+G
Sbjct  5     LLLSSLLG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  271   FLRLLC  276


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2630  VIYQYMDD  2653
             V Y +M+D
Sbjct  126   VRYNFMND  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             M + F LK
Sbjct  131   MNDGFFLK  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8427  RVGAASRDL  8453
             RV  A RDL
Sbjct  233   RVAYAPRDL  241


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             L   +PSDP
Sbjct  399   LSPSQPSDP  407


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -1

Query  298  RTH-QSPPLASCRARFSKPS  242
            RT+ + P     R RFS  S
Sbjct  483  RTQTETP-----RPRFSRHS  497


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9022  PRPR  9011
             PRPR
Sbjct  489   PRPR  492


 Score = 15.5 bits (29),  Expect(2) = 39748
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI T F
Sbjct  448   LISTAF  453


 Score = 15.1 bits (28),  Expect(2) = 39748
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5912  LPSTQVPH  5889
             LP  QV H
Sbjct  412   LPRVQVEH  419


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5139  GSHTMNG  5159
             GS+ M+G
Sbjct  13    GSQAMDG  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  227   QRTVRLRV  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  4629  CLL-ATQSSP  4603
             CL   T+SSP
Sbjct  377   CLVCVTHSSP  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -2

Query  5379  HFLLSSVE*RLFCYVDTQ  5326
             +FL      RL C  D Q
Sbjct  270   QFL------RLLCAADSQ  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  274   LLCAADSQPP  283


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVL S
Sbjct  292   NRVLSS  297


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  364   NGTSLPV  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6415  YGNWLK  6398
             YG W K
Sbjct  57    YGYWFK  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8825  VLSF  8814
             VLSF
Sbjct  199   VLSF  202


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3731  HFLQFLC  3711
             +FL  LC
Sbjct  270   QFLRLLC  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  294   VLSSSH  299


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  380   CVTHS  384


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  406  DPGVLE  411


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7564  ATPN  7553
             ATPN
Sbjct  520   ATPN  523


>ref|NP_338599.1|  three prime repair exonuclease 1 isoform b [Homo sapiens]
Length=314

 GENE ID: 11277 TREX1 | three prime repair exonuclease 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 11/26 (42%)
 Frame = -1

Query  9028  VPPRPRL---------PGK--SPAES  8984
             VPP PR          PGK  SPA S
Sbjct  57    VPPPPRVVDKLSLCVAPGKACSPAAS  82


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  630  PWCLLSLSFDAHN  592
            PWCL      AHN
Sbjct  118  PWCLV-----AHN  125


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2518  PWCLI  2504
             PWCL+
Sbjct  118   PWCLV  122


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  579  VATLY  593
            VATLY
Sbjct  301  VATLY  305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  7103  CS---SNITGL  7126
             CS   S ITGL
Sbjct  77    CSPAASEITGL  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1329  SYNLGS  1312
             SY LGS
Sbjct  176   SYSLGS  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8591  CLVSH  8577
             CLV H
Sbjct  120   CLVAH  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1483  KLPLCI  1466
             KL LC+
Sbjct  66    KLSLCV  71


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7269  RQREEWC  7289
             RQ + WC
Sbjct  114   RQPQPWC  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  2570  LLVILSIPV  2544
             LL IL   V
Sbjct  293   LLAILTLAV  301


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  5821  PSP--PPSPQV  5795
             P P  PP P V
Sbjct  53    PPPTVPPPPRV  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5496  CYETNLA  5476
             C++ NLA
Sbjct  99    CFDDNLA  105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  428  KTYSMG  445
            K YS+G
Sbjct  175  KSYSLG  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6542  ELILLA  6525
             EL LLA
Sbjct  33    ELCLLA  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  8313  LILLGMWRIALQAP  8272
             L LL   R AL+ P
Sbjct  34    LCLLAVHRCALESP  47


>ref|NP_005548.2|  keratin, type I cytoskeletal 16 [Homo sapiens]
Length=473

 GENE ID: 3868 KRT16 | keratin 16 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
 Frame = -1

Query  8314  SYSSRYVANSSTSS  8273
             SYSSR V  SS SS
Sbjct  437   SYSSREVFTSSSSS  450


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +1

Query  3286  MGNMVDRVLASHLD  3327
             M N+ DR LAS LD
Sbjct  121   MQNLNDR-LASYLD  133


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = -3

Query  1532  PFFATIETLNNLSLVPKI  1479
             P+F TIE L N     KI
Sbjct  166   PYFKTIEDLRN-----KI  178


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2937  NSLEEPK  2957
             NSLEE K
Sbjct  359   NSLEETK  365


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  1379  SMSGSRRTRP  1408
             S S SR TRP
Sbjct  448   SSSSSRQTRP  457


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  8589  AA--VDLSHFLKE  8621
             AA  VDLS  L E
Sbjct  276   AAPGVDLSRILNE  288


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  8303  RRIRQGLE  8326
             RR+ QGLE
Sbjct  337   RRVLQGLE  344


 Score = 18.9 bits (37),  Expect(2) =  4440
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8782  QLSQI  8796
             QLSQI
Sbjct  371   QLSQI  375


 Score = 16.8 bits (32),  Expect(2) =  4440
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8750  TDLWMVLQ  8773
             T+L  VLQ
Sbjct  334   TELRRVLQ  341


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5481  LAMKATL  5461
             L MKA L
Sbjct  351   LSMKASL  357


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  7955  CRVPSGLGGG  7926
             CR PS  GGG
Sbjct  40    CRAPSTYGGG  49


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +2

Query  3542  YL----ALQDSG--LEVNI  3580
             YL    AL++    LEV I
Sbjct  131   YLDKVRALEEANADLEVKI  149


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             EQ SQE
Sbjct  394   EQQSQE  399


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2699  IEELR  2713
             IE+LR
Sbjct  171   IEDLR  175


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8238  LRGQIG  8255
             LRGQ G
Sbjct  262   LRGQTG  267


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  351  SVLSGG  368
            SVL GG
Sbjct  33   SVLAGG  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1640  EDLAFL  1657
             E+LA+L
Sbjct  246   EELAYL  251


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = -3

Query  2273  LE-----YCM  2259
             LE     YCM
Sbjct  361   LEETKGRYCM  370


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6182  TNTNSSSGR  6208
             T   SSS R
Sbjct  445   TSSSSSSSR  453


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1410  KARVLAEA  1433
             K R L EA
Sbjct  134   KVRALEEA  141


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1798  EVKGYS  1781
             E+K YS
Sbjct  160   EIKDYS  165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8782  QLSQIR  8799
             QL Q R
Sbjct  385   QLAQLR  390


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4482  KDQQSSS  4502
             K+Q SSS
Sbjct  460   KEQSSSS  466


>ref|NP_001171745.1|  carcinoembryonic antigen-related cell adhesion molecule 1 isoform 
5 precursor [Homo sapiens]
Length=368

 GENE ID: 634 CEACAM1 | carcinoembryonic antigen-related cell adhesion molecule
1 (biliary glycoprotein) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8957  LLTSSLLQGTFRW  8995
             LLT SLL  TF W
Sbjct  19    LLTASLL--TF-W  28


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8889  TLTLLS  8872
             TLTLLS
Sbjct  199   TLTLLS  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7909  TIIVSD  7926
             TIIV D
Sbjct  315   TIIVTD  320


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6614  KTIIV  6628
             KTIIV
Sbjct  314   KTIIV  318


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4043  PAETGQETAY  4072
             PA  G ET Y
Sbjct  93    PANSGRETIY  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6092  YPHASVL  6072
             YP AS L
Sbjct  102   YPNASLL  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -1

Query  520  PSICLQPSDVSNRPGLTAN  464
            P I   PSD   RPG  AN
Sbjct  240  PTIS--PSDTYYRPG--AN  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7669  SVPLHPGRV  7643
             S PLH  RV
Sbjct  5     SAPLHRVRV  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             PV LNV
Sbjct  228   PVTLNV  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4147  STGEIAAIV  4121
             S G IA IV
Sbjct  330   SPGAIAGIV  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1296  LLVQN  1310
             LL+QN
Sbjct  107   LLIQN  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  948  INEEA  962
            +NEEA
Sbjct  130  VNEEA  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3638  SELVNQ  3655
             S+LVN+
Sbjct  127   SDLVNE  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3792  SIPSKNS  3772
             SI S NS
Sbjct  148   SISSNNS  154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND G Y C
Sbjct  208   NDTGPYEC  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2077  NLSQQ  2063
             NL QQ
Sbjct  57    NLPQQ  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6935  QLFNSTWF  6958
             QLF   W+
Sbjct  61    QLFGYSWY  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2534  NVLPQ  2548
             N LPQ
Sbjct  321   NALPQ  325


>ref|NP_003798.2|  tumor necrosis factor ligand superfamily member 14 isoform 1 
precursor [Homo sapiens]
Length=240

 GENE ID: 8740 TNFSF14 | tumor necrosis factor (ligand) superfamily, member 14
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
 Frame = -3

Query  1208  FLWSLSY------VQNAGRAIHSYYFI  1146
             FL  LSY      V  AG     YY+I
Sbjct  122   FLRGLSYHDGALVVTKAG-----YYYI  143


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2357  WEVQLG  2374
             WE QLG
Sbjct  114   WETQLG  119


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  2754  FLSGVVSPHL  2725
             FL GVV  HL
Sbjct  202   FLGGVV--HL  209


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -3

Query  5138  SVA---LGLL  5118
             SVA   LGLL
Sbjct  34    SVARVGLGLL  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8884  NTSLSGS  8864
             N SL GS
Sbjct  102   NSSLTGS  108


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1316  VRILDQ  1299
             VR+LD+
Sbjct  217   VRVLDE  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8681  DLPHTRL  8701
             D P TRL
Sbjct  18    DIPFTRL  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8649  SQRRQ  8663
             S+RRQ
Sbjct  27    SHRRQ  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3913  RRSH  3924
             RRSH
Sbjct  87    RRSH  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5884  LLWGT  5898
             LLW T
Sbjct  112   LLWET  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2371  RNTTSRRV  2394
             R T S RV
Sbjct  189   RATSSSRV  196


>gb|AAK26160.1|  delta transmembrane LIGHT [Homo sapiens]
Length=204

 GENE ID: 8740 TNFSF14 | tumor necrosis factor (ligand) superfamily, member 14
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
 Frame = -3

Query  1208  FLWSLSY------VQNAGRAIHSYYFI  1146
             FL  LSY      V  AG     YY+I
Sbjct  86    FLRGLSYHDGALVVTKAG-----YYYI  107


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6566  AEEEVVIR  6589
             A EEVV+R
Sbjct  175   AGEEVVVR  182


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2357  WEVQLG  2374
             WE QLG
Sbjct  78    WETQLG  83


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  2754  FLSGVVSPHL  2725
             FL GVV  HL
Sbjct  166   FLGGVV--HL  173


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8884  NTSLSGS  8864
             N SL GS
Sbjct  66    NSSLTGS  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1316  VRILDQ  1299
             VR+LD+
Sbjct  181   VRVLDE  186


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8681  DLPHTRL  8701
             D P TRL
Sbjct  18    DIPFTRL  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8649  SQRRQ  8663
             S+RRQ
Sbjct  27    SHRRQ  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3913  RRSH  3924
             RRSH
Sbjct  51    RRSH  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5884  LLWGT  5898
             LLW T
Sbjct  76    LLWET  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2371  RNTTSRRV  2394
             R T S RV
Sbjct  153   RATSSSRV  160


>ref|NP_938023.1|  transmembrane protein 173 [Homo sapiens]
 sp|Q86WV6.1|TM173_HUMAN  RecName: Full=Transmembrane protein 173; AltName: Full=Stimulator 
of interferon genes protein; Short=hSTING; AltName: Full=Mediator 
of IRF3 activation; Short=hMITA
Length=379

 GENE ID: 340061 TMEM173 | transmembrane protein 173 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  4508  LSRGALLVLS  4479
             L RGALL LS
Sbjct  93    LRRGALLLLS  102


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2768  PPFLWM  2785
             PPF WM
Sbjct  115   PPFTWM  120


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7493  QLQARI  7510
             +LQARI
Sbjct  174   ELQARI  179


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7427  NNLLR  7441
             NNLLR
Sbjct  187   NNLLR  191


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = -1

Query  8899  SNLHSNTSLSGSSIPC  8852
             S LH        SIPC
Sbjct  4     SSLHP-------SIPC  12


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  9036  WRALRSC  9056
             WR  R C
Sbjct  82    WRTVRAC  88


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7984  STFFFYSFGP--VGSP  7943
             S +F+YS  P  VG P
Sbjct  102   SIYFYYSL-PNAVGPP  116


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R EEKE
Sbjct  334   RQEEKE  339


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5254  ISFIDMLP  5231
             I F D LP
Sbjct  219   IRFLDKLP  226


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/26 (30%), Positives = 8/26 (30%), Gaps = 14/26 (53%)
 Frame = -3

Query  3059  MGHNTLH--------------VLVLL  3024
             M H  LH               LVLL
Sbjct  1     MPHSSLHPSIPCPRGHGAQKAALVLL  26


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -3

Query  6137  LILHMA---LG  6114
             L+LH+A   LG
Sbjct  47    LVLHLASLQLG  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  669  YFCFALP  649
            YF + LP
Sbjct  104  YFYYSLP  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5129  LGLLGL  5112
             L LLGL
Sbjct  121   LALLGL  126


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             EISA  E G
Sbjct  143   EISAVCEKG  151


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  6777  ALLMLQCACLI  6745
             AL +L  ACL+
Sbjct  22    ALVLL-SACLV  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8379  WPTVR  8393
             W TVR
Sbjct  82    WRTVR  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6471  LNVLL  6457
             LN+LL
Sbjct  130   LNILL  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  5129  LGLLGLVP  5106
             LGL GL P
Sbjct  134   LGLKGLAP  141


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1335  LKALGPA  1355
             LK L PA
Sbjct  136   LKGLAPA  142


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8189  LKNSAV  8206
             LK SAV
Sbjct  346   LKTSAV  351


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1763  LLLRGSCCL  1737
             LLL G C L
Sbjct  58    LLLNGVCSL  66


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  79  ACLEC  93
           ACL C
Sbjct  87  ACLGC  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9164  ACLEC  9178
             ACL C
Sbjct  87    ACLGC  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8275  SLYYFY  8258
             S Y++Y
Sbjct  102   SIYFYY  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5105  MEQAPE  5122
             M Q PE
Sbjct  357   MSQEPE  362


>ref|NP_001020083.1|  carcinoembryonic antigen-related cell adhesion molecule 1 isoform 
2 precursor [Homo sapiens]
Length=464

 GENE ID: 634 CEACAM1 | carcinoembryonic antigen-related cell adhesion molecule
1 (biliary glycoprotein) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8957  LLTSSLLQGTFRW  8995
             LLT SLL  TF W
Sbjct  19    LLTASLL--TF-W  28


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +2

Query  3857  LPPVVAK-EIVAS  3892
             L PVVAK +I AS
Sbjct  321   LSPVVAKPQIKAS  333


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8889  TLTLLS  8872
             TLTLLS
Sbjct  199   TLTLLS  204


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             VNLTC
Sbjct  344   VNLTC  348


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2531  YNVLPQ  2548
             YN LPQ
Sbjct  416   YNALPQ  421


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6614  KTIIV  6628
             KTIIV
Sbjct  314   KTIIV  318


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4043  PAETGQETAY  4072
             PA  G ET Y
Sbjct  93    PANSGRETIY  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6092  YPHASVL  6072
             YP AS L
Sbjct  102   YPNASLL  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -1

Query  520  PSICLQPSDVSNRPGLTAN  464
            P I   PSD   RPG  AN
Sbjct  240  PTIS--PSDTYYRPG--AN  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7669  SVPLHPGRV  7643
             S PLH  RV
Sbjct  5     SAPLHRVRV  13


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5828  WCPISTPIS  5802
             WC +  PIS
Sbjct  395   WCEVFNPIS  403


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             PV LNV
Sbjct  228   PVTLNV  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4147  STGEIAAIV  4121
             S G IA IV
Sbjct  426   SPGAIAGIV  434


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1296  LLVQN  1310
             LL+QN
Sbjct  107   LLIQN  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  948  INEEA  962
            +NEEA
Sbjct  130  VNEEA  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8690  VVDPQIK  8670
             V  PQIK
Sbjct  325   VAKPQIK  331


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3638  SELVNQ  3655
             S+LVN+
Sbjct  127   SDLVNE  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3792  SIPSKNS  3772
             SI S NS
Sbjct  148   SISSNNS  154


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9098  NQRDPV  9081
             NQ DP+
Sbjct  405   NQSDPI  410


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND G Y C
Sbjct  208   NDTGPYEC  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7103  CSSNITG  7123
             CS N TG
Sbjct  348   CSTNDTG  354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2077  NLSQQ  2063
             NL QQ
Sbjct  57    NLPQQ  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6935  QLFNSTWF  6958
             QLF   W+
Sbjct  61    QLFGYSWY  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  8902  LSNLHSNTSLS  8870
             LS  + NT LS
Sbjct  374   LS--QGNTTLS  382


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4800  DPNML  4786
             DP ML
Sbjct  408   DPIML  412


>gb|AAB20493.1|  T-cell V beta 17, TCR Vbeta17 [human, 1013-1 synovial T cells, 
Peptide Partial, 18 aa]
Length=18


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  593  LCASKDRD  616
            LCASK RD
Sbjct  2    LCASKGRD  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  7818  FIYHSQF  7798
             F Y  QF
Sbjct  12    FFYNEQF  18


>ref|NP_008840.1|  ras-specific guanine nucleotide-releasing factor 2 [Homo sapiens]
Length=1237

 GENE ID: 5924 RASGRF2 | Ras protein-specific guanine nucleotide-releasing
factor 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  2748  TKNIRKNL  2771
             T NIRKNL
Sbjct  433   TENIRKNL  440


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  8767  HHPKVSGYL  8741
             H+PKV  YL
Sbjct  1204  HQPKVAQYL  1212


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  1296  RFLSSNFL  1273
             RFLS +FL
Sbjct  655   RFLSIDFL  662


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6898  KTVRYN  6881
             K VRYN
Sbjct  3     KSVRYN  8


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  206  AKGKPEELS  232
            AK K EELS
Sbjct  415  AKSKLEELS  423


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  8282  RAIRHIPRRIRQ  8317
             R I HI R IRQ
Sbjct  1183  RMISHIIREIRQ  1194


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2816  LSIYQDGVHN  2787
             L IYQ+ V N
Sbjct  333   LNIYQEFVRN  342


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1449  NSATIM  1466
             NS TIM
Sbjct  295   NSETIM  300


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4280  PDLLP  4266
             PDLLP
Sbjct  954   PDLLP  958


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -2

Query  3243  HITMLSVVIF  3214
             +IT+L  VIF
Sbjct  1009  QITLLDHVIF  1018


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2600  LRFLS  2586
             LRFLS
Sbjct  654   LRFLS  658


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -2

Query  6591  DLITTSSS  6568
             DL TTSSS
Sbjct  759   DL-TTSSS  765


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/15 (40%), Positives = 10/15 (66%), Gaps = 0/15 (0%)
 Frame = +2

Query  3374  YQLEKEPIVGAETFY  3418
             Y L+K+ I+  +T Y
Sbjct  1211  YLLDKDLIIDEDTLY  1225


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  4394  DIQTKELQKQITKIQNF  4444
             DI      K I K+Q F
Sbjct  205   DI------KKIKKVQSF  215


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3939  TVVQEY  3956
             T+VQ+Y
Sbjct  227   TIVQDY  232


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7748  ILVHSFL  7728
             ILV  FL
Sbjct  264   ILVNGFL  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  728  ILADL  714
            ILADL
Sbjct  321  ILADL  325


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2579  FGILLVILSI  2550
             F ILL  L I
Sbjct  326   FDILLPMLNI  335


 Score = 18.0 bits (35),  Expect(2) = 10315
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8394  ERMR  8405
             ERMR
Sbjct  190   ERMR  193


 Score = 15.1 bits (28),  Expect(2) = 10315
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QE+E+
Sbjct  199   QEDED  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  3858  RLKSLAIAL  3832
             RLKS  IAL
Sbjct  177   RLKSEIIAL  185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6472  IERLII  6455
             IER+I+
Sbjct  442   IERMIV  447


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 12/24 (50%)
 Frame = -1

Query  6496  DIC---TW-SC--------SIERL  6461
             DIC   T  SC        S+ERL
Sbjct  624   DICFSKTLNSCKVPQIRYASVERL  647


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5722  IDRLIDRL  5745
             ++RL +RL
Sbjct  644   VERLLERL  651


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5101  IDGTSPR  5121
             +DG SPR
Sbjct  714   VDGKSPR  720


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6755  AHCNISRA  6778
             AHC +S A
Sbjct  872   AHCSVSPA  879


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             L LLEE
Sbjct  944   LNLLEE  949


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  904  VFSMV  890
            VF MV
Sbjct  248  VFTMV  252


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  1226  YIVSKGFLWSL  1194
             YI   GFL  L
Sbjct  263   YILVNGFLRPL  273


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6206  RMIME  6220
             RMI E
Sbjct  444   RMIVE  448


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5734  IDRLIER  5754
             ++RL ER
Sbjct  644   VERLLER  650


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = -2

Query  8235  TAMAVALSKLTALF---FSS  8185
             TA AV L KL   +   F S
Sbjct  674   TA-AVVLGKLSDIYKRPFTS  692


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8957  VLEVLR  8940
             VL VLR
Sbjct  918   VLNVLR  923


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  4281  LNILRQQYKW  4310
             LN+LR+   W
Sbjct  919   LNVLRH---W  925


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1599  QMKDC  1613
             QM DC
Sbjct  988   QMTDC  992


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  1514  ETLNNLSLVPKI  1479
             +TL  LSL  KI
Sbjct  1222  DTLYELSL--KI  1231


 Score = 15.9 bits (30),  Expect(2) = 24449
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7450  LNSPQQ  7433
             L SP+Q
Sbjct  792   LSSPEQ  797


 Score = 15.5 bits (29),  Expect(2) = 24449
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3468  TYPAF  3454
             TYP F
Sbjct  382   TYPMF  386


 Score = 15.5 bits (29),  Expect(2) = 24449
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3371  IISLRE  3354
             II L E
Sbjct  392   IITLHE  397


 Score = 15.1 bits (28),  Expect(2) = 24449
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7377  VIEAAP  7360
             V E AP
Sbjct  825   VLESAP  830


 Score = 15.5 bits (29),  Expect(2) = 24453
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7005  TQSP  7016
             TQSP
Sbjct  770   TQSP  773


 Score = 15.5 bits (29),  Expect(2) = 24453
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7079  PPISGQI  7099
             PP  GQI
Sbjct  778   PPHTGQI  784


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6232  YLSFL  6218
             YL FL
Sbjct  14    YLAFL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5175  RSLRM  5189
             R LRM
Sbjct  271   RPLRM  275


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 2/8 (25%)
 Frame = +3

Query  5952  MIQ--RYI  5969
             M Q  RYI
Sbjct  385   MFQIPRYI  392


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1065  QEQIGWMTN  1091
             QE   WM +
Sbjct  574   QEKAAWMSD  582


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1592  FLSTF  1578
             FL TF
Sbjct  661   FLNTF  665


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  885  LNTMLNT  905
            LNT L T
Sbjct  662  LNTFLHT  668


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6696  SREDQGEHL  6722
             S  + GEHL
Sbjct  705   SQNNRGEHL  713


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8998  SPAESP  8981
             SPA SP
Sbjct  772   SPAASP  777


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1192  DKDQRNP  1212
             DK++R P
Sbjct  1035  DKNERTP  1041


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3468  LLIEED  3485
             L I+ED
Sbjct  1217  LIIDED  1222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3629  QSESELVNQ  3655
             + ESE V Q
Sbjct  253   EAESEYVHQ  261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -2

Query  4761  VGCVLLN----LFLDEGFH  4717
             V  + LN    +FL E FH
Sbjct  289   VSSIFLNSETIMFLHEIFH  307


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1339  FKIV  1328
             FKIV
Sbjct  552   FKIV  555


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2008  FMSTDF  1991
             F+S DF
Sbjct  656   FLSIDF  661


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +3

Query  1704  APPEESFRSGVE  1739
             AP +   R GVE
Sbjct  829   APAD---RAGVE  837


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  8250  SVPSATAMAVA  8218
             SV  A A A+A
Sbjct  875   SVSPASAFAIA  885


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3131  FKNL  3142
             FKNL
Sbjct  1136  FKNL  1139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9031  PVPPR  9017
             P PPR
Sbjct  77    PAPPR  81


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3625  WLC  3617
             WLC
Sbjct  219   WLC  221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2176  RRKNKSI  2196
             RRK K I
Sbjct  222   RRKWKTI  228


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -1

Query  8371  TL----LFDHLPPIL  8339
             TL    LFD L P L
Sbjct  319   TLILADLFDILLPML  333


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  1296  LLVQ-NANPDC  1325
             LL Q  ANP C
Sbjct  362   LLKQYEANPAC  372


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8948  LQELL  8962
             L+ELL
Sbjct  395   LHELL  399


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2354  SLEF  2343
             SLEF
Sbjct  411   SLEF  414


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  483  LLETSE  500
            LL+TS+
Sbjct  453  LLDTSQ  458


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7641  FQICSR  7624
             F IC R
Sbjct  502   FLICTR  507


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3164  FLHIFL  3147
             FL  FL
Sbjct  661   FLNTFL  666


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  187  PEQGP  201
            PEQ P
Sbjct  795  PEQSP  799


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2917  NPWVNL  2900
             NP V+L
Sbjct  808   NPRVDL  813


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  8412  EPA-ADRVGAAS  8444
             E A ADR G  S
Sbjct  827   ESAPADRAGVES  838


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8326  KDFAIRWVA  8352
             K+F IR  A
Sbjct  906   KEFIIRRTA  914


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4235  MNKELK  4252
             +N ELK
Sbjct  935   LNNELK  940


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 17/42 (40%)
 Frame = +3

Query  1296  LLVQN----ANPDCKTILKALGPAA------TLEEM--MTAC  1385
             LL Q     AN     IL AL           LE+   MT C
Sbjct  956   LLPQERKAAAN-----ILRALSQDDQDDIHLKLEDIIQMTDC  992


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4409  ELQKQIT  4429
             EL  QIT
Sbjct  1005  ELAEQIT  1011


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -1

Query  496   DVSNRPGLTAN  464
             DVS R    AN
Sbjct  1066  DVSSR----AN  1072


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  5300  VAEFLL  5283
             VA++LL
Sbjct  1208  VAQYLL  1213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6792  VLFHF  6778
             VLF F
Sbjct  50    VLFYF  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4945  IAESEK  4928
             I E EK
Sbjct  153   IVETEK  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  8854  M-GWMTRR  8874
             M GW+ RR
Sbjct  216   MRGWLCRR  223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  340  VRERQY  357
            VR  QY
Sbjct  340  VRNHQY  345


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  975  YPILQLP  955
            YP  Q P
Sbjct  383  YPMFQIP  389


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2696  KIEEL  2710
             K EEL
Sbjct  418   KLEEL  422


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3881  IVASCD  3898
             IV  CD
Sbjct  446   IVEGCD  451


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3044  LHVLVLLE  3021
             + VL LLE
Sbjct  941   MNVLNLLE  948


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2943  RSLHN  2929
             R LHN
Sbjct  1085  RCLHN  1089


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = -2

Query  4662  LLNFS-M  4645
             L NFS M
Sbjct  1176  LVNFSKM  1182


>ref|NP_002594.1|  high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A 
isoform a [Homo sapiens]
Length=456

 GENE ID: 5150 PDE7A | phosphodiesterase 7A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  6502  CADIC----TW  6482
             CADIC    TW
Sbjct  334   CADICNPCRTW  344


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  488  RNIRRL  505
            RNIRRL
Sbjct  80   RNIRRL  85


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 7/20 (35%)
 Frame = -2

Query  900  LAWCLNLVGWLLLIMLKTWV  841
            L WCL LV    LI    W+
Sbjct  5    LIWCLALV----LIK---WI  17


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -2

Query  8169  RR---FHQYLRAS  8140
             RR   F+ YLR S
Sbjct  83    RRLLSFQRYLRSS  95


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  6550  VKWQSSRRRG  6579
             +KW  S RRG
Sbjct  14    IKWITSKRRG  23


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -3

Query  6149  HRVGLILHMAL  6117
             HR  L+L+MAL
Sbjct  323   HRH-LVLQMAL  332


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8365  LFDHLP  8348
             LF HLP
Sbjct  272   LFSHLP  277


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4382  IIATDI  4399
             I ATDI
Sbjct  292   ILATDI  297


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1071  QIGWMT  1088
             QIG MT
Sbjct  387   QIGFMT  392


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  268  KRRGA  282
            KRRGA
Sbjct  20   KRRGA  24


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3651  LTNSDSL  3631
             LTN +SL
Sbjct  138   LTNGNSL  144


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7602  FQGTAV  7585
             F GTAV
Sbjct  98    FRGTAV  103


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3155  IFLF  3144
             IFLF
Sbjct  132   IFLF  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  7468  ATHSLGHQAAPG  7503
             ATH L H   PG
Sbjct  224   ATHDLDH---PG  232


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7505  RILAVERYL  7531
             R L  +RYL
Sbjct  84    RLLSFQRYL  92


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  3355  SLSEIMVPVRER  3390
             S SEI V V  R
Sbjct  69    SQSEIEVSVSAR  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  743  EHPGAN  760
            +HPG N
Sbjct  229  DHPGVN  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 7/19 (36%)
 Frame = -2

Query  4341  PFLLK-------LWMNTAI  4306
             PFL K       L  NT +
Sbjct  236   PFLIKTNHYLATLYKNTSV  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8198  SAVSLL  8215
             SAV LL
Sbjct  262   SAVGLL  267


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7626  RDLLLQLA  7603
             R L LQ+A
Sbjct  324   RHLVLQMA  331


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6155  LKCTD  6169
             LKC D
Sbjct  332   LKCAD  336


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3809  HEKYHS  3826
             +E YHS
Sbjct  176   QEDYHS  181


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8625  PFLLK  8611
             PFL K
Sbjct  236   PFLIK  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6038  SHLP  6027
             SHLP
Sbjct  274   SHLP  277


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2651  HPCID  2637
             HP ID
Sbjct  59    HPYID  63


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8365  LFDHL  8351
             LFD L
Sbjct  134   LFDRL  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8704  SLISRTTH  8727
             SLI   TH
Sbjct  219   SLIAAATH  226


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6035  VTENF  6049
             VTE F
Sbjct  354   VTEEF  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  262  ARFS  251
            ARFS
Sbjct  403  ARFS  406


>sp|Q5H9R7.2|SAPS3_HUMAN  RecName: Full=Serine/threonine-protein phosphatase 6 regulatory 
subunit 3; AltName: Full=SAPS domain family member 3; AltName: 
Full=Sporulation-induced transcript 4-associated protein 
SAPL
Length=873

 GENE ID: 55291 PPP6R3 | protein phosphatase 6, regulatory subunit 3
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = +2

Query  2165  WPLTEEK-IKALVEI  2206
             W L EEK I  LVEI
Sbjct  185   W-LNEEKIIQRLVEI  198


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = +2

Query  3653  QIIEQLIK----KEK  3685
             +IIEQL      KEK
Sbjct  246   EIIEQLLSNIFHKEK  260


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8237  AEGTDRVIEVV  8269
             AE TD V E V
Sbjct  783   AESTDKVTETV  793


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  8652  QRRQDILDLW  8681
             Q RQD+L+ W
Sbjct  177   QPRQDVLN-W  185


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  5507  PKAFVMKQTW  5478
             PK  VMK TW
Sbjct  324   PKKSVMKTTW  333


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  229  LST-QDSAC  252
            LST QD AC
Sbjct  822  LSTSQDAAC  830


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  5015  ISTIL--GTSSIN  5047
             IS  L   TSSIN
Sbjct  351   ISSLLQTNTSSIN  363


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  2068  QQISSNYVD  2042
             QQ  SN++D
Sbjct  552   QQMTSNFID  560


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  1257  QASQEVKNWMTE  1292
             Q  Q+V NW+ E
Sbjct  177   QPRQDVLNWLNE  188


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  8244  PSATAMAV  8221
             PSA A+AV
Sbjct  756   PSAAALAV  763


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +3

Query  6756  HIVTLVEQNGITL  6794
             HI TL E   +TL
Sbjct  12    HIDTLLEREDVTL  24


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +1

Query  5374  EME----PVDP  5394
             EME    P DP
Sbjct  743   EMETSTEPMDP  753


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  8449  TWKNMEQSQVAI  8484
             TW N  + QV I
Sbjct  383   TWNNFLHTQVEI  394


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -2

Query  6591  DLITT----SSS  6568
             DL+TT    SSS
Sbjct  514   DLVTTCHIHSSS  525


 Score = 18.0 bits (35),  Expect(2) = 11830
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +1

Query  7171  LQTWRRRYEGQLE  7209
             L+T R  +EG+ E
Sbjct  276   LETRRPTFEGHIE  288


 Score = 15.1 bits (28),  Expect(2) = 11830
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7157  NESEI  7171
             NES I
Sbjct  261   NESAI  265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4708  DITMKALIQE  4737
             D+T+K L  E
Sbjct  21    DVTLKELMDE  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2309  RKLVDF  2326
             RKL++F
Sbjct  42    RKLIEF  47


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8922  RDEML  8908
             RD+ML
Sbjct  223   RDQML  227


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4186  LLDSRPPT  4163
             LL+ R PT
Sbjct  275   LLETRRPT  282


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 0/18 (0%)
 Frame = +1

Query  139  DPSDPFSQCGKSLAVAPE  192
            +P DP       LAV PE
Sbjct  749  EPMDPLTPSAAALAVQPE  766


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -1

Query  4174  RPPTGGPNRSTGE  4136
             RPP   P   TG+
Sbjct  848   RPPSSSPEQRTGQ  860


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3643  VSQSNNR  3663
             VSQ N+R
Sbjct  89    VSQMNDR  95


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7623  DLLLQL  7606
             DLLL L
Sbjct  164   DLLLRL  169


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  5719  KIDRLIDRLIE  5751
             KI   I RL+E
Sbjct  190   KI---IQRLVE  197


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             C+VHS
Sbjct  467   CIVHS  471


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2731  PPQQM  2717
             PPQ M
Sbjct  65    PPQDM  69


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8763  IQRSVDI  8743
             IQR V+I
Sbjct  192   IQRLVEI  198


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7629  SRDLLLQ  7609
             SRD +LQ
Sbjct  222   SRDQMLQ  228


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4152  LGPPVG  4169
             L PPVG
Sbjct  336   LDPPVG  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  4758  PLGDARL-VI  4784
             P G+ RL VI
Sbjct  339   PVGNTRLNVI  348


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -3

Query  6158  LN*HRVGLILHM  6123
             LN   +G IL M
Sbjct  369   LN--SIGVILNM  378


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6352  CQLI  6341
             CQLI
Sbjct  431   CQLI  434


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 13/26 (50%)
 Frame = -1

Query  4945  IA---ESEKQSK*YR*ISWSASSGST  4877
             IA   ES+  S          SSGST
Sbjct  628   IAFTPESQRRS----------SSGST  643


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7105  TSNLST  7088
             TS LST
Sbjct  727   TSSLST  732


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  936  LKETINEE  959
            LKE  +EE
Sbjct  24   LKELMDEE  31


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -2

Query  8340  YSKILSKPCLIL  8305
             +SK+LS    IL
Sbjct  124   FSKVLS----IL  131


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4539  LLSCI  4525
             LL CI
Sbjct  169   LLTCI  173


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2269  SSICHKEK  2292
             S I HKEK
Sbjct  253   SNIFHKEK  260


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3037  TWSVL  3051
             TW VL
Sbjct  332   TWGVL  336


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6632  LNTSVEI  6652
             L T VEI
Sbjct  388   LHTQVEI  394


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  3638  SELVNQIIEQLIK  3676
             S LV Q    LIK
Sbjct  478   SALVQQ----LIK  486


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3216  FCTAS  3202
             FCT S
Sbjct  499   FCTSS  503


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6987  ITLKE  7001
             +TLKE
Sbjct  22    VTLKE  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4719  ESPHPR  4736
             E P+PR
Sbjct  174   EPPQPR  179


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4752  VLLNLF  4735
             V LN+F
Sbjct  374   VILNMF  379


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  229  LSTQDS  246
            LST DS
Sbjct  730  LSTKDS  735


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5824  APSPPPS  5804
             AP PP S
Sbjct  846   APRPPSS  852


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1359  TLEEMM  1376
             TL E+M
Sbjct  23    TLKELM  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8817  GENTSLL  8837
             GE+ SLL
Sbjct  97    GEDESLL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5178  SLRMKL  5195
             SL MKL
Sbjct  101   SLLMKL  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3924  MASPF  3910
             +ASPF
Sbjct  400   LASPF  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7665  TEKLTIT  7685
             TE  TIT
Sbjct  407   TENATIT  413


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  783  RTLNAW  800
            R L AW
Sbjct  436  RILEAW  441


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7170  SSDLEEE  7190
             S D EEE
Sbjct  648   STDSEEE  654


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5475  MKATL  5461
             MK TL
Sbjct  798   MKETL  802


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5896  YPIIDCD  5876
             YP I C+
Sbjct  77    YPNISCE  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4367  ERIVD  4381
             E IVD
Sbjct  137   EQIVD  141


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2600  LRFLSC  2583
             LR L C
Sbjct  167   LRLLTC  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7675  NFSVPL  7658
             NF VP+
Sbjct  686   NFDVPM  691


>ref|NP_998767.1|  sialic acid-binding Ig-like lectin 15 precursor [Homo sapiens]
 sp|Q6ZMC9.1|SIG15_HUMAN  RecName: Full=Sialic acid-binding Ig-like lectin 15; Short=Siglec-15; 
AltName: Full=CD33 antigen-like 3; Flags: Precursor
Length=328

 GENE ID: 284266 SIGLEC15 | sialic acid binding Ig-like lectin 15 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 14/35 (40%)
 Frame = -3

Query  9035  LPSPAQA-----T----PP----WKVPS-GKSLVA  8973
             LPSPA+A     T    PP    W  P  G SL A
Sbjct  176   LPSPAHAFRALCTAEGEPPPALAWSGPALGNSLAA  210


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  927  WLLDVPPLCLAWCL  886
            WLL     CLAW L
Sbjct  6    WLLA----CLAWVL  15


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6083  ASVLPCHF  6060
             A VLPC F
Sbjct  59    AAVLPCTF  66


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7811  TTANLL  7794
             TT NLL
Sbjct  27    TTENLL  32


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5954  DTEVH  5968
             +TEVH
Sbjct  33    NTEVH  37


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7158  MSPRS  7172
             M PRS
Sbjct  316   MNPRS  320


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  9038  ASPQILHIS  9064
             A P I  IS
Sbjct  166   AAPRIVNIS  174


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3953  IWQLDC  3970
             IW L C
Sbjct  5     IWLLAC  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  1642  RSGLPTREGQG  1674
             RS  P REG+G
Sbjct  212   RS--P-REGHG  219


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  6217  HYHSPATTI  6191
             HY  P T I
Sbjct  72    HYDGPLTAI  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8083  ERLTL  8097
             ERL L
Sbjct  130   ERLAL  134


>sp|Q8N8S7.2|ENAH_HUMAN  RecName: Full=Protein enabled homolog
Length=591

 GENE ID: 55740 ENAH | enabled homolog (Drosophila) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 9/22 (40%)
 Frame = +3

Query  7269  RQREEWCREKKEQ-------WE  7313
             R+R+E  RE  EQ       WE
Sbjct  240   RERQE--RERQEQLEREQLEWE  259


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8871  EREVLEW  8891
             ERE LEW
Sbjct  252   EREQLEW  258


 Score = 21.4 bits (43),  Expect(2) =   896
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -3

Query  9038  PLPS-PAQAT---PP  9006
             PLP  PAQA    PP
Sbjct  318   PLPPGPAQASVALPP  332


 Score = 17.2 bits (33),  Expect(2) =   896
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  9031  PVPPRPRLP  9005
             P PP P LP
Sbjct  349   PPPPPPPLP  357


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  319  RLEGERWVRER  351
            RLE ER  RER
Sbjct  170  RLERERLERER  180


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  319  RLEGERWVRER  351
            RLE ER  RER
Sbjct  175  RLERERLERER  185


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  319  RLEGERWVRERQ  354
            RLE E   RERQ
Sbjct  185  RLEQEQLERERQ  196


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -1

Query  5827  GAPSPPPSP----QV  5795
             G P PPP P    QV
Sbjct  346   GPPPPPPPPPLPNQV  360


 Score = 19.3 bits (38),  Expect(2) =  2204
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  364   PPPPPAP  370


 Score = 18.5 bits (36),  Expect(2) =  2204
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5824  APSPPP  5807
             AP PPP
Sbjct  312   APPPPP  317


 Score = 18.5 bits (36),  Expect(2) =  2204
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  334   PGPPPPP  340


 Score = 17.6 bits (34),  Expect(2) =  2204
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5827  GAPSPPP  5807
             G P PPP
Sbjct  335   GPPPPPP  341


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7655  MEWDRE  7672
             +EW+RE
Sbjct  256   LEWERE  261


 Score = 19.3 bits (38),  Expect(2) =  4177
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  8975  ASSMSAVLEVL  8943
             AS M   LEVL
Sbjct  101   ASAMMHALEVL  111


 Score = 16.3 bits (31),  Expect(2) =  4177
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8954  LEVLRMQL  8931
             LE+ R QL
Sbjct  140   LEIQRRQL  147


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8661  QDILD  8675
             QDILD
Sbjct  560   QDILD  564


 Score = 17.6 bits (34),  Expect(2) =  5100
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  4195  NSLQSPKS  4218
             +SL+ PKS
Sbjct  530   DSLHRPKS  537


 Score = 17.6 bits (34),  Expect(2) =  5100
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  4217  QGVVESMNKELKK  4255
             Q + + M KEL K
Sbjct  560   QDILDEMRKELTK  572


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1405  AIRQE  1419
             AIRQE
Sbjct  580   AIRQE  584


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/26 (34%), Positives = 9/26 (34%), Gaps = 15/26 (57%)
 Frame = +1

Query  319  RLEGER---------------WVRER  351
            RLE ER               W RER
Sbjct  237  RLERERQERERQEQLEREQLEWERER  262


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  319  RLEGERWVRER  351
            R+E ER  RER
Sbjct  165  RMERERLERER  175


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +2

Query  608  DRDKRHQGSFRQDRGR  655
            DR+ R++   RQ+R R
Sbjct  223  DRE-RQE---RQERER  234


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  361   PPPPPPP  367


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  362   PPPPPPP  368


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4861  FFLHSM  4844
             FFL SM
Sbjct  377   FFLASM  382


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +3

Query  8343  MGGKWSKSSVI  8375
             M G  SKS VI
Sbjct  503   MNG--SKSPVI  511


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1405  PGPPTP  1388
             PGPP P
Sbjct  334   PGPPPP  339


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1853  LKEALLD  1873
             LKE L D
Sbjct  573   LKEELID  579


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4394  DIQTKELQKQ  4423
             +IQ  +LQ Q
Sbjct  141   EIQRRQLQEQ  150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  8871  EREVLEWRFDSRL  8909
             ERE LE     RL
Sbjct  231   ERERLE-----RL  238


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  9025  PPRPRLPGKSP  8993
             PP P LP   P
Sbjct  337   PPPPPLPSTGP  347


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5758  EDSGNESE  5781
             ED G +SE
Sbjct  471   EDKGEDSE  478


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             ERE LE
Sbjct  157   ERERLE  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             ERE LE
Sbjct  167   ERERLE  172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             ERE LE
Sbjct  172   ERERLE  177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             ERE LE
Sbjct  177   ERERLE  182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  1884  SAPVSNRAS  1858
             S PV   AS
Sbjct  477   SEPVTSKAS  485


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  382  HRSNSPPL  359
            HR  S PL
Sbjct  533  HRPKSTPL  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  638  RQDRGR  655
            RQ+R R
Sbjct  195  RQERER  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  638  RQDRGR  655
            RQ+R R
Sbjct  242  RQERER  247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  258  RARQE  272
            R RQE
Sbjct  245  RERQE  249


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  313   PPPPP  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  332   PPPGP  336


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  337   PPPPP  341


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  5053  GVINAASAK  5027
             GV N AS K
Sbjct  420   GV-NSASSK  427


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8131  ASQKFH  8114
             A Q FH
Sbjct  73    ATQTFH  78


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5093  QFRNTRQ  5073
             Q R+ RQ
Sbjct  79    QWRDARQ  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1614  YNLSFG  1597
             Y L FG
Sbjct  87    YGLNFG  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1947  LEVL  1958
             LEVL
Sbjct  108   LEVL  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8056  PVPLQLPP  8079
             P P Q PP
Sbjct  355   PLPNQVPP  362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3092  PASVFLLLSL  3063
             PAS F L S+
Sbjct  373   PASGFFLASM  382


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4808  RRKRLA  4825
             RR R A
Sbjct  454   RRRRIA  459


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             L+EM K
Sbjct  563   LDEMRK  568


>emb|CAD89242.1|  immunoglobulin heavy chain [Homo sapiens]
Length=113


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  6730  YCNKCSP--W  6707
             YC KCSP  W
Sbjct  95    YCAKCSPSLW  104


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  70    ISRDNSKNTL  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5452  YCKKC  5466
             YC KC
Sbjct  95    YCAKC  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


>ref|NP_060496.2|  phosphofurin acidic cluster sorting protein 1 [Homo sapiens]
Length=963

 GENE ID: 55690 PACS1 | phosphofurin acidic cluster sorting protein 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -2

Query  1092  YLSSIL--FV  1069
             YLSSIL  FV
Sbjct  634   YLSSILRFFV  643


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/11 (54%), Positives = 9/11 (81%), Gaps = 0/11 (0%)
 Frame = +2

Query  6011  PQEVVLVNVTE  6043
             P+ V+LVN T+
Sbjct  563   PENVILVNTTD  573


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  5812  VEMGHHAPWDVD  5847
             V+M   A W+VD
Sbjct  99    VQMNLYATWEVD  110


 Score = 18.9 bits (37),  Expect(2) =  5346
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8235  TAMAVA  8218
             T MAVA
Sbjct  74    TSMAVA  79


 Score = 15.9 bits (30),  Expect(2) =  5346
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8293  ANSSTSS  8273
             A SS SS
Sbjct  65    ASSSSSS  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +1

Query  3376  PVRERTHS----RSRNL  3414
             P  ERT S    RS +L
Sbjct  521   PLSERTNSSDSERSPDL  537


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  3562  GIRSKHSNR  3588
             GI SK S+R
Sbjct  262   GIKSKLSDR  270


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3416  YVDGAA  3433
             YV+GAA
Sbjct  713   YVNGAA  718


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/20 (55%), Positives = 11/20 (55%), Gaps = 5/20 (25%)
 Frame = +1

Query  6538  NS--TAVKWQSSRR--RGSN  6585
             NS   AVK Q S R  R SN
Sbjct  139   NSVVIAVKLQGSKRILR-SN  157


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1461  IMMQR  1475
             IM+QR
Sbjct  192   IMLQR  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2456  DEDFRK  2473
             DED RK
Sbjct  305   DEDLRK  310


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  4450  LLQGQQK------STLE  4482
             LLQ Q K      ST E
Sbjct  582   LLQDQRKPVVCTCSTVE  598


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5014  DLYNTW  5031
             +LY TW
Sbjct  102   NLYATW  107


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +2

Query  7664  DR--EINNY  7684
             DR  +I+NY
Sbjct  269   DRSPDIDNY  277


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8579  DLQGS  8593
             DLQGS
Sbjct  489   DLQGS  493


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8996  GLSREA  9013
             GLSR+A
Sbjct  787   GLSRDA  792


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  904  QWGDIK  921
            +W DIK
Sbjct  932  EWSDIK  937


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1713  EESFRS  1730
             EESF S
Sbjct  282   EESFSS  287


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5955  IQRY  5966
             IQRY
Sbjct  610   IQRY  613


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9026  PAQATPP  9006
             P Q TPP
Sbjct  42    PQQPTPP  48


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4854  RKKRY  4868
             R KRY
Sbjct  196   RRKRY  200


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  813  EEKAFSPE  836
            EE  FS E
Sbjct  281  EEESFSSE  288


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2731  PPQQ  2720
             PPQQ
Sbjct  33    PPQQ  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6601  EIDRS  6587
             E+DRS
Sbjct  108   EVDRS  112


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/23 (39%), Positives = 12/23 (52%), Gaps = 4/23 (17%)
 Frame = +2

Query  8213  LNATAIAV-AEGTDRVI---EVV  8269
             LN   IAV  +G  R+    E+V
Sbjct  138   LNSVVIAVKLQGSKRILRSNEIV  160


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  425  IKTYSMGKQ  451
            IK YS+  Q
Sbjct  248  IKIYSLSSQ  256


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7557  QIPR  7546
             QIPR
Sbjct  542   QIPR  545


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -2

Query  2142  IPGFNFTGTVSIGL  2101
             IP   F G V +GL
Sbjct  746   IP---FIGVVKVGL  756


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  1785  TVPCLSAPASEG  1750
             TVP  S P S G
Sbjct  776   TVPSTSPPSSSG  787


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4001  AVHVASG  4021
             AV VASG
Sbjct  77    AVAVASG  83


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1101  IPVGEI  1118
             +PV EI
Sbjct  243   VPVAEI  248


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3521  KTELQ  3535
             KT+LQ
Sbjct  487   KTDLQ  491


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1198  DQRNP  1212
             DQR P
Sbjct  585   DQRKP  589


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6084  CICST  6070
             C CST
Sbjct  592   CTCST  596


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8214  SMPQP  8228
             SMP P
Sbjct  619   SMPRP  623


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7946  PSGLGGGS  7923
             P G GGGS
Sbjct  11    PGGAGGGS  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1749  PPQKQE  1766
             PPQ Q+
Sbjct  33    PPQQQQ  38


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2850  QLSFS  2836
             QL FS
Sbjct  172   QLTFS  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2058  LPIML  2044
             L IML
Sbjct  190   LQIML  194


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 8/22 (36%)
 Frame = +3

Query  2211  QRWKRKGKFQKLGLKIHTILQY  2276
             QR KR         K  TIL Y
Sbjct  195   QRRKR--------YKNRTILGY  208


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  987  LDALY  973
            LD LY
Sbjct  366  LDELY  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 15/43 (34%), Positives = 16/43 (37%), Gaps = 17/43 (39%)
 Frame = +1

Query  1474  EAILGT-KERL------LSVSIVAKKGTQPEIA-----GPLGK  1566
             E IL T K  L      +S S       Q EI      G LGK
Sbjct  389   ESILSTPKPKLKPFFEGMSQS-----SSQTEIGSLNSKGSLGK  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             ST K  LKP
Sbjct  393   STPKPKLKP  401


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2801  DGVHNP  2784
             +GVH P
Sbjct  500   EGVHTP  505


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8357  PLATHLIAK  8331
             PL  H +AK
Sbjct  663   PLGSHPVAK  671


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8259  ITLSVPS  8239
             + L VPS
Sbjct  773   VSLTVPS  779


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7260  HPPRQ  7274
             H PRQ
Sbjct  503   HTPRQ  507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1705  PHQKR  1719
             P QKR
Sbjct  505   PRQKR  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7529  LKDQQL  7546
             LK+ QL
Sbjct  513   LKERQL  518


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  3408  SAPTMGS  3388
             S P M S
Sbjct  798   SSPSMSS  804


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  1459  VAEFVTWLIASAK  1421
             V E +  LI SAK
Sbjct  906   VIEGISRLICSAK  918


>emb|CAD88710.1|  immunoglobulin lambda light chain variable region [Homo sapiens]
Length=87


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
 Frame = -1

Query  5479  GNESN--TFYNSNWYKQF  5432
             GN SN    Y+  WY QF
Sbjct  8     GNSSNIGAHYDVHWYQQF  25


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6498  AQYNVH  6515
             A+Y+VH
Sbjct  15    AHYDVH  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8139  GKPSNIG  8159
             G  SNIG
Sbjct  8     GNSSNIG  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2829  TIGCT  2815
             TI CT
Sbjct  3     TISCT  7


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8168  GDSTNI  8151
             G+S NI
Sbjct  8     GNSSNI  13


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  702  GHSN  713
            GHSN
Sbjct  36   GHSN  39


>emb|CAD88726.1|  immunoglobulin lambda light chain variable region [Homo sapiens]
Length=93


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
 Frame = -1

Query  5479  GNESN--TFYNSNWYKQF  5432
             GN SN    Y+  WY QF
Sbjct  14    GNSSNIGAHYDVHWYQQF  31


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6498  AQYNVH  6515
             A+Y+VH
Sbjct  21    AHYDVH  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8139  GKPSNIG  8159
             G  SNIG
Sbjct  14    GNSSNIG  20


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2829  TIGCT  2815
             TI CT
Sbjct  9     TISCT  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8168  GDSTNI  8151
             G+S NI
Sbjct  14    GNSSNI  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  702  GHSN  713
            GHSN
Sbjct  42   GHSN  45


>sp|Q9NW08.2|RPC2_HUMAN  RecName: Full=DNA-directed RNA polymerase III subunit RPC2; Short=RNA 
polymerase III subunit C2; AltName: Full=DNA-directed 
RNA polymerase III subunit B; AltName: Full=DNA-directed 
RNA polymerase III 127.6 kDa polypeptide; AltName: Full=C128
Length=1133

 GENE ID: 55703 POLR3B | polymerase (RNA) III (DNA directed) polypeptide B
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  5919  PLYFVHQMLKHMI  5957
             P Y+  Q LKHM+
Sbjct  1006  PVYY--QKLKHMV  1016


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +2

Query  2693  TKIEELRQHLL  2725
             TKIEE R+ LL
Sbjct  304   TKIEEARE-LL  313


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = +2

Query  6845  IIFK----QSSGGDPEIV  6886
             IIFK    +S   D EIV
Sbjct  238   IIFKAMGVES---DQEIV  252


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  4238  NKELKKIIGQV  4270
             N E+KKI  QV
Sbjct  381   NSEMKKIADQV  391


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = +3

Query  6453  VIIRRSM----EQDHVQM  6494
             VII   M    +Q+ VQM
Sbjct  237   VIIFKAMGVESDQEIVQM  254


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = -3

Query  1322  IWVR--ILDQQGFCHP  1281
             IW R  ILD  G C P
Sbjct  803   IW-RHEILDADGICSP  817


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2493  GMVNAV  2476
             GMVNA+
Sbjct  414   GMVNAI  419


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8574  PMTYKAAVD  8600
             P TYK A D
Sbjct  855   PITYKGATD  863


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 5/22 (22%)
 Frame = +3

Query  1083  MTNNPPIPVGEI-YKR---WII  1136
             MT   PI V +I Y R    II
Sbjct  107   MTYSAPITV-DIEYTRGSQRII  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  9010  LPGKSPAE  8987
             L GK PAE
Sbjct  147   LTGKTPAE  154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2062  ISSNYVDRC  2036
             IS N  DRC
Sbjct  574   ISTNLTDRC  582


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  431  TY--SMGKQ  451
            TY   MGKQ
Sbjct  684  TYQCAMGKQ  692


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +2

Query  8921  RGPRAASGVL  8950
             RGPRA   VL
Sbjct  1025  RGPRA---VL  1031


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  44    LTREPT  61
             LTR+PT
Sbjct  1031  LTRQPT  1036


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  9129  LTREPT  9146
             LTR+PT
Sbjct  1031  LTRQPT  1036


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8720  LHTRARG  8740
             +H RARG
Sbjct  1020  MHARARG  1026


 Score = 18.0 bits (35),  Expect(2) =  8903
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +2

Query  5270  GVEAIIRILQQL  5305
             GVE +I I +QL
Sbjct  173   GVEKVILIQEQL  184


 Score = 15.5 bits (29),  Expect(2) =  8903
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5409  EASRKSA  5429
             EA RK A
Sbjct  192   EADRKGA  198


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4650  KSLVKHH  4670
             K LVK+H
Sbjct  37    KGLVKQH  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  423   KLKHIV  440
             KLKH V
Sbjct  1011  KLKHMV  1016


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  5828  MLLGMLMICS  5857
             +LL  LMI S
Sbjct  1063  LLLERLMISS  1072


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2058  LPIML  2044
             +PIML
Sbjct  136   MPIML  140


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  5320  KMDKQ---QLL  5297
             KMD Q   Q L
Sbjct  430   KMDRQGVTQVL  440


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3507  TQQIRRLSY  3533
             TQ   RLSY
Sbjct  437   TQVLSRLSY  445


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4704  YRHHYESP  4727
             Y HH +SP
Sbjct  674   YPHHNQSP  681


 Score = 17.2 bits (33),  Expect(2) = 15235
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4887  ELADQL  4904
             ELA QL
Sbjct  363   ELAGQL  368


 Score = 15.1 bits (28),  Expect(2) = 15235
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4893  ADQLI  4907
             ADQ I
Sbjct  388   ADQVI  392


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4781  NNNILG  4798
             N NILG
Sbjct  542   NGNILG  547


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1346  GTSGYTRRN  1372
             GT GY  RN
Sbjct  695   GTIGYNQRN  703


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5921  WWLLP  5907
             W LLP
Sbjct  27    WRLLP  31


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8954  ELLTSSLL  8977
             ELL S  L
Sbjct  311   ELLASTIL  318


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1268  GGKKLDDRN  1294
             G  K DDR+
Sbjct  347   GDNKVDDRD  355


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3832  PITVIF  3815
             PI +IF
Sbjct  235   PIVIIF  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6724  YNRKNR  6741
             YN  NR
Sbjct  699   YNQRNR  704


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4392  VAIMS  4378
             VA+MS
Sbjct  741   VAVMS  745


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7892  VRQGY  7906
             VR+GY
Sbjct  977   VRHGY  981


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3465  MLLIE  3479
             MLL E
Sbjct  1062  MLLLE  1066


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1052  SSCYVTS  1032
             SSC V S
Sbjct  1097  SSCHVSS  1103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1766  ADRQGTV  1786
             ADR G V
Sbjct  193   ADRKGAV  199


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2573  FQSSMTKI  2596
             F S M KI
Sbjct  380   FNSEMKKI  387


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7073  TLLFLL  7056
             TL++LL
Sbjct  707   TLMYLL  712


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5994  YPQTP  6008
             YPQ P
Sbjct  714   YPQKP  718


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
 Frame = -1

Query  1252  ALRVL*NRST*SL-KGSFGPCL  1190
             AL VL N    SL  G FG CL
Sbjct  754   AL-VL-NKA--SLDRG-FGRCL  770


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5849  ICSATEK  5869
             ICS  EK
Sbjct  814   ICSPGEK  820


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2205  ISTNAF  2188
             IS +AF
Sbjct  1070  ISSDAF  1075


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3717  ELEEMN  3734
             EL+ MN
Sbjct  1116  ELQSMN  1121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7388  QARQLL  7405
             +AR+LL
Sbjct  308   EARELL  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5946  KHMIQ  5960
             KHM Q
Sbjct  404   KHMRQ  408


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4463  CPCNKPE  4443
             CP + PE
Sbjct  480   CPSDTPE  486


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3749  LIYLL  3735
             L YLL
Sbjct  708   LMYLL  712


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8452  RSRD  8441
             RSRD
Sbjct  1039  RSRD  1042


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6469  ERLII  6455
             ERL I
Sbjct  1066  ERLMI  1070


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4244  ELKKI  4258
             E KKI
Sbjct  54    EIKKI  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2154  FGPS  2143
             FGPS
Sbjct  265   FGPS  268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = +3

Query  4320  STIL-----KE  4337
             STIL     KE
Sbjct  315   STILTHVPVKE  325


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4835  LTQMPV  4818
             LT+ PV
Sbjct  318   LTHVPV  323


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4734  RISSE  4748
             RISS+
Sbjct  454   RISSQ  458


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  508  LQPS  497
            LQPS
Sbjct  471  LQPS  474


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
 Frame = +1

Query  5284  NKNSATT--AVYPFSELGV  5334
             NK+  TT   + PF  LGV
Sbjct  651   NKD--TTHLEIEPFTLLGV  667


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6528  GLIP  6517
             GLIP
Sbjct  670   GLIP  673


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1908  LISSN  1894
             +ISSN
Sbjct  870   MISSN  874


>sp|Q8TF05.1|PP4R1_HUMAN  RecName: Full=Serine/threonine-protein phosphatase 4 regulatory 
subunit 1
Length=950

 GENE ID: 9989 PPP4R1 | protein phosphatase 4, regulatory subunit 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3714  KELEEM  3731
             KELEEM
Sbjct  505   KELEEM  510


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +3

Query  4887  ELADQLIHL  4913
             ELA+QLI L
Sbjct  761   ELAEQLILL  769


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8474  CDCSMF  8457
             CDC MF
Sbjct  222   CDCRMF  227


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  76   KACLECF  96
            KAC ECF
Sbjct  270  KACAECF  276


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9161  KACLECF  9181
             KAC ECF
Sbjct  270   KACAECF  276


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6297  FINLI  6311
             FINLI
Sbjct  296   FINLI  300


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  375  LILPR  361
            LILPR
Sbjct  212  LILPR  216


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  334  RWVRE  348
            RWVR+
Sbjct  305  RWVRQ  309


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +1

Query  187  PEQGPESERE  216
            PE GPE E E
Sbjct  482  PE-GPEEESE  490


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6183  LIPIVV  6200
             L PIVV
Sbjct  132   LLPIVV  137


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = +3

Query  453  EL-ERFAVN----PGLLE  491
            EL ERF V     P L E
Sbjct  162  ELIERFDVETKVCPVLIE  179


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8211  KLTALF  8194
             KL ALF
Sbjct  291   KLSALF  296


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3147  QENMQE  3164
             QE++QE
Sbjct  8     QEDLQE  13


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7517  VERYLKDQ  7540
             V RYL DQ
Sbjct  136   VVRYLADQ  143


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8919  DEML  8908
             DEML
Sbjct  42    DEML  45


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  906  VGGHQAAMQML  938
            V G+QA  +ML
Sbjct  243  VVGQQATEEML  253


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  2214  RWKRKGKFQKLG  2249
             RW R   FQ LG
Sbjct  305   RWVRQAAFQSLG  316


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3246  PHITM  3232
             P ITM
Sbjct  497   PNITM  501


 Score = 16.3 bits (31),  Expect(2) = 19528
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1709  TRRELQ  1726
             TR EL+
Sbjct  503   TRKELE  508


 Score = 15.5 bits (29),  Expect(2) = 19528
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1692  PEPTAPPEES  1721
             P P  P EES
Sbjct  480   PSPEGPEEES  489


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  193  VRAPLLE  173
            VRA L+E
Sbjct  102  VRAELME  108


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5162  LELLE-EL  5182
             L LLE EL
Sbjct  156   LALLEQEL  163


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4392  VAIM  4381
             VAIM
Sbjct  194   VAIM  197


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5803  EMGVE  5817
             EM VE
Sbjct  341   EMSVE  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8514  LEAQEE  8531
             L+A+EE
Sbjct  539   LDAHEE  544


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6058  PHVKIFCH  6035
             PH+  FC+
Sbjct  111   PHIALFCQ  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3257  KFKLPI  3274
             KF LPI
Sbjct  130   KFLLPI  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +2

Query  3839  MASDFNLPPVVAKEI  3883
             MA      P V K+I
Sbjct  200   MA------PMVGKDI  208


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6469  ERLI  6458
             ERLI
Sbjct  210   ERLI  213


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  4208  DCREFQI  4188
             DCR F++
Sbjct  223   DCRMFHV  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6650  FLQMCS  6633
             F Q+CS
Sbjct  257   FFQLCS  262


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3358  LSEIMVP  3378
             L EI VP
Sbjct  395   LGEISVP  401


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2770  SIPLD  2784
             S+PLD
Sbjct  399   SVPLD  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6083  HEDIIS  6100
             HE+ IS
Sbjct  542   HEETIS  547


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  140  IPQTLL  157
            +PQ LL
Sbjct  617  VPQALL  622


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +3

Query  4887  ELA----DQL  4904
             ELA    DQL
Sbjct  689   ELAVILGDQL  698


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3968  NLVAIF  3951
             +LV IF
Sbjct  702   DLVPIF  707


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8769  YKLV  8780
             YKLV
Sbjct  802   YKLV  805


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2475  YFLKSSS  2455
             YFL S S
Sbjct  898   YFLASAS  904


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  677  STASS  691
            STASS
Sbjct  944  STASS  948


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8407  RLIL  8396
             RLIL
Sbjct  211   RLIL  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = -1

Query  8335  QNPFQALS-YSSRYVANSSTSSLYY  8264
             Q  FQ L  + S + AN S S  Y+
Sbjct  309   QAAFQSLGPFISTF-ANPSSSGQYF  332


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1592  FLSTF  1578
             F STF
Sbjct  318   FISTF  322


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4170  HQQAA  4156
             HQ+AA
Sbjct  415   HQEAA  419


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -2

Query  2526  YLIPGVSLFILG  2491
             Y  PGV L  LG
Sbjct  647   YSLPGVAL-TLG  657


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1634  FREDLA  1651
             FR +LA
Sbjct  758   FRAELA  763


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2735  LTTPD  2749
             LT PD
Sbjct  180   LTAPD  184


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  250  KPSP  239
            KPSP
Sbjct  479  KPSP  482


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2710  ETTSVE  2727
             ET S+E
Sbjct  544   ETISIE  549


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1872  SNRASFS  1852
             SN  SFS
Sbjct  598   SNNSSFS  604


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  7816  KIIHNDSRR  7842
             K  H D RR
Sbjct  730   KLLHIDKRR  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6560  CHLTAVE  6540
             CH  AVE
Sbjct  905   CHQEAVE  911


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5085  TKLTED  5102
             TK  ED
Sbjct  936   TKISED  941


>ref|NP_065071.1|  zinc finger MIZ domain-containing protein 1 [Homo sapiens]
Length=1067

 GENE ID: 57178 ZMIZ1 | zinc finger, MIZ-type containing 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -1

Query  5827  GAPSPPPS------PQ  5798
             GAP PPPS      PQ
Sbjct  980   GAPPPPPSQPPRQPPQ  995


 Score = 21.8 bits (44),  Expect(2) =   496
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1769  RLLLLR  1752
             RLLLLR
Sbjct  105   RLLLLR  110


 Score = 17.6 bits (34),  Expect(2) =   496
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1778  LVYRLL  1761
             L YRLL
Sbjct  73    LGYRLL  78


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4275  SLTCPIIF  4252
             SL CPI F
Sbjct  739   SLKCPITF  746


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2594  ILEPFR  2611
             +LEPFR
Sbjct  573   VLEPFR  578


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 13/26 (50%)
 Frame = -1

Query  7555  NPQELLIL*VSFHSQDSCLELLDAPD  7478
             NP ELL    S+         LD PD
Sbjct  1039  NPDELL----SY---------LDPPD  1051


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2908  VNLTCPIQF  2882
             V L CPI F
Sbjct  738   VSLKCPITF  746


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  5141  EPHNEWTLELLEELKN  5188
             EP     L+LL EL N
Sbjct  1028  EP----SLDLLPELTN  1039


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  7812  YHSQFVMLNQ  7783
             Y SQF M NQ
Sbjct  326   YNSQF-M-NQ  333


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6149  VSLKC  6163
             VSLKC
Sbjct  738   VSLKC  742


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8805  LLSYL  8791
             LLSYL
Sbjct  1043  LLSYL  1047


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  4515  PSPFQRSFAGPF-QS  4474
             P  FQR    PF QS
Sbjct  42    PRAFQR----PFEQS  52


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  979  TLSHSAAS  956
            TLSHS  S
Sbjct  138  TLSHSDGS  145


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7205  WRSEL  7219
             WRS+L
Sbjct  602   WRSDL  606


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4779  VITTYWG  4799
             V+TT WG
Sbjct  166   VVTTVWG  172


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2295  TVLNGEN  2315
             T LNGE+
Sbjct  723   TTLNGED  729


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  7369  LNDADGTGQTII  7404
             LN  DG  QT I
Sbjct  725   LNGEDGVEQTAI  736


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1936  DRGNWR  1953
             +RG WR
Sbjct  775   ERGTWR  780


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1403  GSSYS  1389
             GSSYS
Sbjct  484   GSSYS  488


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = -2

Query  4353  PP------IPPFL  4333
             PP      IPP+L
Sbjct  518   PPMTPGSSIPPYL  530


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 0/16 (0%)
 Frame = +3

Query  831  PEVIPMFSALSEGATP  878
            P V  M  AL  G  P
Sbjct  856  PNVMEMIAALGPGPSP  871


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -3

Query  9044  GSPLPSPAQATPP  9006
             G P P P Q  PP
Sbjct  980   GAPPPPPSQ--PP  990


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3765  LIPALTN  3745
             L P LTN
Sbjct  1033  LLPELTN  1039


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5880  QSIMGYL  5900
             QS MG L
Sbjct  51    QSLMGCL  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3738  TCSFPPIP  3715
             TCS  P+P
Sbjct  819   TCSWRPVP  826


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  4725  PHPRISSEVHIP  4760
             PHP I    H+P
Sbjct  955   PHPSIQQGLHVP  966


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7260  HPPRQ  7274
             +PPRQ
Sbjct  988   QPPRQ  992


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7453  ATASVA  7470
             ATA VA
Sbjct  299   ATATVA  304


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4519  CPFTF  4505
             CP TF
Sbjct  742   CPITF  746


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4765  PSGM  4754
             PSGM
Sbjct  357   PSGM  360


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  5824  APSPP-P--SP  5801
             AP PP P  SP
Sbjct  433   APNPPRPLTSP  443


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2894  PNSISPLTS  2868
             PN   PLTS
Sbjct  434   PNPPRPLTS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4894  ASSGST  4877
             ASSG T
Sbjct  718   ASSGNT  723


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  9007  PGKSPAESPL  8978
             PGK P + PL
Sbjct  120   PGKLPMQPPL  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5475  MKATL  5461
             MK TL
Sbjct  135   MKPTL  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4319  IHNFKR  4336
             I+N KR
Sbjct  400   IQNIKR  405


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1263  SQEVK  1277
             SQ+VK
Sbjct  533   SQDVK  537


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7354  ASCCSQ  7337
             A CCS+
Sbjct  670   ACCCSH  675


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4285  FSLISYL  4265
             F L SYL
Sbjct  764   FDLESYL  770


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  6399  LSQ----FPYIIVP  6428
             LS+    FPY  VP
Sbjct  139   LSHSDGSFPYDSVP  152


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  1727  VWGRDNNSPSE  1759
             VWG  N S S+
Sbjct  170   VWGVTNTSQSQ  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5220  SQILG  5206
             SQ+LG
Sbjct  179   SQVLG  183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2240  KIGPENPY  2263
             K GP  PY
Sbjct  226   KAGPAQPY  233


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2391  PAGCGIP  2371
             PAG GIP
Sbjct  261   PAGMGIP  267


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             N Q NT
Sbjct  476   NGQNNT  481


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6458  NKTFNG  6475
             N TF G
Sbjct  479   NNTFSG  484


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1382  CCHHFF  1365
             CC H F
Sbjct  672   CCSHLF  677


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8850  LHGMDDPE  8873
             LH  DDP+
Sbjct  831   LHIKDDPD  838


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1696  SQQPH  1710
             S QPH
Sbjct  952   SDQPH  956


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2438  MHHPHP  2421
             +H PHP
Sbjct  963   LHVPHP  968


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5413  HPGSQ  5427
             HP SQ
Sbjct  967   HPSSQ  971


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6822  SLNLL  6808
             SL+LL
Sbjct  1030  SLDLL  1034


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6852  LSNPQE  6869
             L NP E
Sbjct  1037  LTNPDE  1042


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             L SYL
Sbjct  1043  LLSYL  1047


>ref|NP_057224.2|  tubulin polymerization-promoting protein family member 3 [Homo 
sapiens]
 ref|NP_057048.2|  tubulin polymerization-promoting protein family member 3 [Homo 
sapiens]
Length=176

 GENE ID: 51673 TPPP3 | tubulin polymerization-promoting protein family member 3
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 24/44 (54%)
 Frame = +3

Query  8592  AVD-L--------SHFLKE------KG-GLEGLIHSQRRQDILD  8675
             AVD L        SH  KE      KG G  G      RQDILD
Sbjct  121   AVDRLTDTSRYTGSH--KERFDESGKGKGIAG------RQDILD  156


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  2453  LDEDFRKYTAFTI  2491
             L+E FRK   F I
Sbjct  10    LEESFRK---FAI  19


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1713  EESFR  1727
             EESFR
Sbjct  11    EESFR  15


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6352  CQLIAG  6335
             CQL+AG
Sbjct  100   CQLVAG  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = +2

Query  2405  KSVTVLDVGDAYFS  2446
             KSVT  DV D  FS
Sbjct  48    KSVTGTDV-DIVFS  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5722  IDRLID  5739
             +DRL D
Sbjct  122   VDRLTD  127


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3714  KELEEM  3731
             K LEE+
Sbjct  77    KALEEL  82


>ref|NP_001026854.1|  splicing factor, arginine/serine-rich 7 [Homo sapiens]
Length=238

 GENE ID: 6432 SRSF7 | serine/arginine-rich splicing factor 7 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  3382  RERTHSRSR  3408
             R R HSRSR
Sbjct  131   RSRSHSRSR  139


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  4177  SRPPTGGPNRS  4145
             SR P G P RS
Sbjct  221   SRSPSGSPRRS  231


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +3

Query  5358  RQRRARNGASRS  5393
             R RR R   SRS
Sbjct  124   RRRRSR---SRS  132


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3977  LEGKVI  3994
             L+GKVI
Sbjct  67    LDGKVI  72


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +3

Query  1488  NQRKIVKCFNCGKEGHTARNC  1550
             N R    C+ CG  GH A +C
Sbjct  103   NDR----CYECGEKGHYAYDC  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5113  SPRRPR  5130
             SPRR R
Sbjct  159   SPRRSR  164


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = -1

Query  9034  SPVPPRPRLPGKSPAESP  8981
             SP P R R    SP  SP
Sbjct  215   SPSPKRSR----SPSGSP  228


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3388  RTHSRSR  3408
             R  SRSR
Sbjct  127   RSRSRSR  133


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3388  RTHSRSR  3408
             R  SRSR
Sbjct  195   RSRSRSR  201


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2542  STGMER  2559
             STGM R
Sbjct  82    STGMPR  87


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2014  RYSISR  2031
             RYS SR
Sbjct  142   RYSRSR  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8452  RSRDAAP  8432
             RSR A P
Sbjct  154   RSRSASP  160


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +3

Query  5364  RRARNGA---SR  5390
             RR R G    SR
Sbjct  177   RRSRSGSIKGSR  188


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  3376  PVRERTHSRS  3405
             P R R  SRS
Sbjct  193   PSRSRSRSRS  202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  2176  RRKNKSISR  2202
             RR   S SR
Sbjct  125   RRRSRSRSR  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8723  HTRARG  8740
             H R RG
Sbjct  135   HSRSRG  140


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8882  VRVE  8893
             VRVE
Sbjct  77    VRVE  80


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3382  RERTHSRS  3405
             R R  SRS
Sbjct  127   RSRSRSRS  134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3382  RERTHSRSR  3408
             R R  SR R
Sbjct  145   RSRSRSRGR  153


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +2

Query  4727  SSKNKFRSTHPTR  4765
             SS  K RS  P R
Sbjct  208   SSRSKSRSPSPKR  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8909  SISSRGPRAAS  8941
             SIS R  R AS
Sbjct  165   SISLRRSRSAS  175


>ref|NP_003356.2|  cytochrome b-c1 complex subunit 1, mitochondrial precursor [Homo 
sapiens]
Length=480

 GENE ID: 7384 UQCRC1 | ubiquinol-cytochrome c reductase core protein I
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 7/22 (31%)
 Frame = +2

Query  2024  LV----GPTPV--NIIGRNLLT  2071
             LV    G TPV  +I GR LLT
Sbjct  399   LVSHLDGTTPVCEDI-GRSLLT  419


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  9049  LRARHSP  9029
             LRAR SP
Sbjct  18    LRARRSP  24


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2390  LRDVVF  2373
             +RDVVF
Sbjct  179   MRDVVF  184


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6613  SIVREI  6596
             S+VREI
Sbjct  439   SVVREI  444


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8857  PCRLTG  8840
             PCR TG
Sbjct  267   PCRFTG  272


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  292  HQSPPLAS  269
            H S PLAS
Sbjct  323  HLSSPLAS  330


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3310  LASHLD  3327
             L SHLD
Sbjct  399   LVSHLD  404


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8605  LRSTA  8591
             LRSTA
Sbjct  32    LRSTA  36


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  1245  LR--AEQASQ  1268
             LR   EQ SQ
Sbjct  57    LRVASEQSSQ  66


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8443  DAAPTL  8426
             DA PTL
Sbjct  260   DAVPTL  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7611  QLAFQGT  7591
             +LAF GT
Sbjct  95    HLAFKGT  101


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7397  QLLSGIVQ  7420
             +LL  IVQ
Sbjct  145   ELLGDIVQ  152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5862  VALQIIN  5842
             VALQ+ N
Sbjct  302   VALQVAN  308


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 10/18 (55%)
 Frame = +1

Query  5065  SHLCLVLRN*QRIDGTSP  5118
             SHL          DGT P
Sbjct  401   SHL----------DGTTP  408


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -2

Query  5394  RI----YWLHF  5374
             RI    +WL F
Sbjct  470   RIRSGMFWLRF  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6426  PRLVL  6440
             PR+VL
Sbjct  227   PRMVL  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1320  LGSHF  1306
             LG HF
Sbjct  354   LGAHF  358


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2160  LTFGPSIP  2137
             LT+G  IP
Sbjct  418   LTYGRRIP  425


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6398  RIPL  6387
             RIPL
Sbjct  423   RIPL  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1370  NDDSM  1384
             ND SM
Sbjct  175   NDASM  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2632  YLSIH  2646
             YLS H
Sbjct  219   YLSTH  223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9124  RAPRLRS  9104
             R P LRS
Sbjct  28    RTPALRS  34


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  39  RAPRLRS  19
           R P LRS
Sbjct  28  RTPALRS  34


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  707  QQSGQP  724
            +QS QP
Sbjct  62   EQSSQP  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7389  CTVSV  7375
             CTV V
Sbjct  69    CTVGV  73


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7454  QQHLLQL  7474
             +Q+LL L
Sbjct  239   HQQLLDL  245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8907  LAFHHVA  8927
             L F HVA
Sbjct  282   LPFAHVA  288


>ref|NP_542782.1|  scavenger receptor cysteine-rich domain-containing group B protein 
precursor [Homo sapiens]
Length=575

 GENE ID: 136853 SRCRB4D | scavenger receptor cysteine rich domain containing,
group B (4 domains) [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +2

Query  5783  EKYQHLWRWGWR  5818
             EK     RWGWR
Sbjct  15    EK-----RWGWR  21


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 10/20 (50%)
 Frame = -2

Query  8643  LALPVP----------PFLL  8614
             LALPVP          P LL
Sbjct  103   LALPVPRPLAFGQGRGPILL  122


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/31 (38%), Positives = 12/31 (38%), Gaps = 15/31 (48%)
 Frame = -2

Query  4845  WRLPDPNAS-------L-FLLYADPNMLLLP  4777
             WRL D  A        L FLL       LLP
Sbjct  20    WRLGDGSAAPPFLPQALSFLL-------LLP  43


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5291  FLLWLPL  5271
             FLL LPL
Sbjct  38    FLLLLPL  44


 Score = 18.0 bits (35),  Expect(2) =  6356
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7851  PTKPPT  7834
             PT PPT
Sbjct  162   PTQPPT  167


 Score = 16.8 bits (32),  Expect(2) =  6356
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  7951  GSPRGWEV  7928
             GS RGW V
Sbjct  138   GS-RGWGV  144


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8009  RLVNG  8023
             RLVNG
Sbjct  474   RLVNG  478


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 6/22 (27%)
 Frame = -2

Query  2061  FLPI------MLTGVGPTNTVP  2014
             FLP       MLT   P  T P
Sbjct  160   FLPTQPPTRKMLTSRAPPTTLP  181


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  247  PSPASRE  227
            PS A RE
Sbjct  300  PSSATRE  306


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +1

Query  196  GPESERETRGAL  231
            GP+  RET  AL
Sbjct  320  GPQPSRET--AL  329


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2647  HVLIDN  2630
             H+L DN
Sbjct  250   HILLDN  255


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9038  PLPSPAQATP  9009
             PL S  Q TP
Sbjct  43    PLASALQPTP  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2765  LSDVFCLVW  2739
             LSD F L W
Sbjct  420   LSDCFHLGW  428


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8428  GWEQH  8442
             GW QH
Sbjct  427   GWGQH  431


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7910  PLSFQ  7924
             PL FQ
Sbjct  52    PLPFQ  56


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8342  DGWQVV  8359
             D W VV
Sbjct  85    DDWDVV  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2199  TNAF  2188
             TNAF
Sbjct  240   TNAF  243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5344  LLCRH  5330
             LLC H
Sbjct  550   LLCSH  554


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  284  AAPRLLPCALQQA  246
            AAP  LP    QA
Sbjct  27   AAPPFLP----QA  35


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7797  QIGCG  7811
             Q GCG
Sbjct  98    QLGCG  102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  111  GHTLLE  94
            GH LL+
Sbjct  249  GHILLD  254


>ref|NP_000192.2|  intercellular adhesion molecule 1 precursor [Homo sapiens]
Length=532

 GENE ID: 3383 ICAM1 | intercellular adhesion molecule 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4743  SE--VHIPLGDARL---VITTY  4793
             SE  VH  LGD RL   V  TY
Sbjct  246   SEAQVHLALGDQRLNPTV--TY  265


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  935  VKRDHQ*G---SCR  967
            V RDH+ G   SCR
Sbjct  175  VRRDHH-GANFSCR  187


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4887  ELADQLIH  4910
             E A QLIH
Sbjct  376   EVAGQLIH  383


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = +1

Query  8146  PQILVESPTVLE  8181
             PQ LV SP VLE
Sbjct  219   PQ-LV-SPRVLE  228


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  7878  ESTAKTIL  7855
             +STAKT L
Sbjct  100   QSTAKTFL  107


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -3

Query  9044  GSPL-PSPAQATPP  9006
             G P+ P   QATPP
Sbjct  520   GTPMKPN-TQATPP  532


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5575  LDESDC  5558
             LDE DC
Sbjct  398   LDERDC  403


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6852  LSNPQEGTQ  6878
             LSN QE  Q
Sbjct  81    LSNVQEDSQ  89


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6867  EGTQKL  6884
             EGTQ L
Sbjct  283   EGTQRL  288


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1027  QGEVT  1041
             QGEVT
Sbjct  463   QGEVT  467


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3212  ALPLLIVL  3189
             ALP L VL
Sbjct  9     ALPALLVL  16


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8127  PRSSTILVT  8101
             PR   +LVT
Sbjct  39    PRGGSVLVT  47


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7807  QPICY  7793
             QP CY
Sbjct  89    QPMCY  93


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7049  WQKVGK  7066
             WQ VGK
Sbjct  124   WQPVGK  129


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5120  EDQGPQR  5140
             ED+G QR
Sbjct  281   EDEGTQR  287


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7211  FSNCP  7197
             +SNCP
Sbjct  93    YSNCP  97


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2939  LLRGTKAL  2962
             LLRG K L
Sbjct  150   LLRGEKEL  157


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  555  ELRSLY  572
            ELR LY
Sbjct  389  ELRVLY  394


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  909  PLCLAW  892
            P+C AW
Sbjct  417  PMCQAW  422


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9022  PRPRLP  9005
             PRP LP
Sbjct  6     PRPALP  11


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  987  LDALYPI  967
            LD L+P+
Sbjct  239  LDGLFPV  245


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             LP +LVL
Sbjct  10    LPALLVL  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1863  ASFSC  1849
             A FSC
Sbjct  182   ANFSC  186


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1098  PIPVGE  1115
             P P+GE
Sbjct  438   PLPIGE  443


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  768  QAISPRTL  791
            Q +SPR L
Sbjct  220  QLVSPRVL  227


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8234  VAEGTD  8251
             V EGT+
Sbjct  322   VSEGTE  327


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4400  QTKEL  4414
             QT EL
Sbjct  386   QTREL  390


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1525  LPQLK  1511
             LP+LK
Sbjct  426   LPELK  430


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9075  KKQLL  9061
             KK+LL
Sbjct  66    KKELL  70


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4241  KELK  4252
             KELK
Sbjct  155   KELK  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6690  SVSREDQG  6713
             SV  ED+G
Sbjct  277   SVTAEDEG  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6542  QLLL  6553
             QLLL
Sbjct  355   QLLL  358


>ref|NP_000949.1|  prostaglandin E2 receptor EP4 subtype [Homo sapiens]
Length=488

 GENE ID: 5734 PTGER4 | prostaglandin E receptor 4 (subtype EP4) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 7/24 (29%)
 Frame = -2

Query  1191  LCPECW*GY-TF-LLFYLIPGLSI  1126
             LC E    Y TF LLF+   GLSI
Sbjct  91    LC-E----YSTFILLFFSLSGLSI  109


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8667  ILDLWIY  8687
             ILD WIY
Sbjct  323   ILDPWIY  329


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5386  VDPRLEPW  5409
             V+P L+PW
Sbjct  320   VNPILDPW  327


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7511  LAVERYL  7531
             + VERYL
Sbjct  113   MSVERYL  119


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  8909  SISSRGPRAAS  8941
             S+ SRG  AAS
Sbjct  235   SVASRGHPAAS  245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6282  FCTLPLM  6262
             FC LP M
Sbjct  150   FCALPNM  156


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -2

Query  5784  SFTLI-ATVFC  5755
             SF LI ATV C
Sbjct  193   SF-LILATVLC  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  968  FCSFLI  951
            F SFLI
Sbjct  191  FSSFLI  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4416  CNSLVC  4399
             CN LVC
Sbjct  202   CNVLVC  207


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8624  GGTGRANSLPK  8656
             GG GRA   PK
Sbjct  458   GGSGRAGPAPK  468


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  2015  GTVLVGPTPVNI  2050
             GT LV   PV I
Sbjct  68    GTLLV--SPVTI  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/43 (27%), Positives = 14/43 (32%), Gaps = 25/43 (58%)
 Frame = -1

Query  4693  LAFPETYIWCF----TKL---------------FHVLILILST  4622
             L +P+T  WCF    T                 F    LIL T
Sbjct  163   LQYPDT--WCFIDWTTNVTAHAAYSYMYAGFSSF----LILAT  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +3

Query  5307  CLSIFRIGCRHSRIGVTRQRRARNG  5381
             CL  F   CR   IG  R  R R G
Sbjct  346   CL--F---CR---IGGSR--RERSG  360


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6767  ISRAKWNNTLKQIAS  6811
             ISR      LK+I S
Sbjct  381   ISRE-----LKEISS  390


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1794  TSLRSL  1811
             TSLR L
Sbjct  429   TSLRTL  434


 Score = 16.3 bits (31),  Expect(2) = 21443
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8093  LLIVTRIVEL  8122
             LLI T  V L
Sbjct  273   LLIATSLVVL  282


 Score = 15.9 bits (30),  Expect(2) = 21443
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8199  VLLACSMP  8222
             V L CS P
Sbjct  280   VVLICSIP  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2767  FFLMFF  2750
             F L+FF
Sbjct  97    FILLFF  102


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  2014  YSFMSTDFYEYLI  1976
             YS+M   F  +LI
Sbjct  184   YSYMYAGFSSFLI  196


 Score = 16.3 bits (31),  Expect(2) = 30812
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2056  SNYVD  2042
             S YVD
Sbjct  128   SHYVD  132


 Score = 15.1 bits (28),  Expect(2) = 30812
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2070  VNRFLPI  2050
             V R+L I
Sbjct  115   VERYLAI  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5252  YGDTW  5266
             Y DTW
Sbjct  165   YPDTW  169


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3843  LVILTC  3860
             LV+L C
Sbjct  279   LVVLIC  284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  1889  TVLEEMSLP  1915
             T L ++SLP
Sbjct  394   TLLPDLSLP  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  958  SSLMVSF  938
            SSL V F
Sbjct  470  SSLQVTF  476


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R E+KE
Sbjct  46    RKEQKE  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1047  LLCHFPLV  1024
             L C  PLV
Sbjct  282   LICSIPLV  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9063  LICRI  9049
             LIC I
Sbjct  282   LICSI  286


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  841  ITSGLKAFSST  809
            I   LK  SST
Sbjct  381  ISRELKEISST  391


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  1540  AVCPSLPQL  1514
             A  P LP L
Sbjct  243   AASPALPRL  251


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5579  LYQSS  5593
             LYQ S
Sbjct  297   LYQPS  301


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1051  VPAMSL  1034
             VP M L
Sbjct  418   VPGMGL  423


>ref|NP_079058.1|  non-homologous end-joining factor 1 [Homo sapiens]
Length=299

 GENE ID: 79840 NHEJ1 | nonhomologous end-joining factor 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  7107  EHLICPLMG  7081
             +HLI PLMG
Sbjct  133   QHLIRPLMG  141


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTLSA
Sbjct  264   APTLSA  269


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2330  ELNKR  2344
             ELNKR
Sbjct  60    ELNKR  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3792  IRPKMNM  3812
             IRP M M
Sbjct  136   IRPLMGM  142


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9139  SLVSQ  9125
             SLVSQ
Sbjct  129   SLVSQ  133


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  54   SLVSQ  40
            SLVSQ
Sbjct  129  SLVSQ  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7427  NNLLR  7441
             +NLLR
Sbjct  77    DNLLR  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7715  ILQLRSVLS  7689
             IL  RS LS
Sbjct  105   ILRVRSELS  113


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5504  KAFVM  5490
             K FVM
Sbjct  208   KPFVM  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7625  LEQIW  7639
             L+Q+W
Sbjct  41    LQQVW  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3731  EQVD  3742
             EQVD
Sbjct  47    EQVD  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2714  QHLLR  2728
             QHL R
Sbjct  133   QHLIR  137


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2479  SILPEVFI  2456
             S L  VFI
Sbjct  22    SLLAKVFI  29


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6044  FLSHLPILL  6018
             FL HL  LL
Sbjct  72    FLCHLDNLL  80


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5374  LALLCRV  5354
             LAL C V
Sbjct  144   LALQCQV  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9096  PERPSTG  9076
             PE  STG
Sbjct  270   PEKESTG  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1042  MSLPL  1028
             MSL L
Sbjct  142   MSLAL  146


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3708  HTKELE  3725
             H K+LE
Sbjct  158   HMKDLE  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1438  LIASAKTL  1415
             L+ SA TL
Sbjct  260   LVSSAPTL  267


>ref|NP_079069.1|  clusterin-associated protein 1 isoform 2 [Homo sapiens]
Length=247

 GENE ID: 23059 CLUAP1 | clusterin associated protein 1 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 6/22 (27%)
 Frame = +2

Query  3077  EIQKQGQGQWTYQIYQEPFKNL  3142
             E QKQ      Y  Y E F NL
Sbjct  85    ELQKQ------YDTYLEKFQNL  100


 Score = 24.0 bits (49),  Expect =   225
 Identities = 18/65 (27%), Positives = 22/65 (33%), Gaps = 33/65 (50%)
 Frame = +2

Query  7133  TRDGGNSNN-----ESEIFRPGGGDMRDNWRSELYKYKVVKI---------EPLGVAPTK  7270
             T  GG+S++     ESEI      DM D+                      E     PTK
Sbjct  189   TMQGGDSDDNEDSEESEI------DMEDD-------------DDEDDDLEDESISLSPTK  229

Query  7271  AKRRV  7285
               RRV
Sbjct  230   PNRRV  234


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = +1

Query  3082  TEAGARPMDI  3111
             TEA ARP++I
Sbjct  3     TEAIARPLEI  12


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  918  QAAMQML  938
            Q AM+ML
Sbjct  171  QTAMEML  177


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4663  NTICMFQGKL  4692
             NT C+ Q KL
Sbjct  123   NTLCLIQNKL  132


 Score = 20.2 bits (40),  Expect(2) =  2181
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +2

Query  3611  IQAQPDQSESEL  3646
             IQ   D+S+SEL
Sbjct  152   IQED-DESDSEL  162


 Score = 17.2 bits (33),  Expect(2) =  2181
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3471  LIEEDKKL  3494
             L EE+K L
Sbjct  132   LKEEEKRL  139


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 19/42 (45%)
 Frame = +2

Query  1853  LKEA---LLDTGADD-------------TVLEEMSLPGRWKP  1930
             LKE    LL  G +D               LEE  LP   KP
Sbjct  132   LKEEEKRLLKSGSNDDSDIDIQEDDESDSELEERRLP---KP  170


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 7/21 (33%)
 Frame = +3

Query  606  RIEIKD-------TKEALDKI  647
            RI IK+       TK+ L+ +
Sbjct  20   RIAIKEILTQVQKTKDLLNNV  40


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  7151  SNNESEI  7171
             SN++S+I
Sbjct  144   SNDDSDI  150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8675  IKDIL  8661
             IK+IL
Sbjct  23    IKEIL  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5783  EKYQHL  5800
             EK+Q L
Sbjct  95    EKFQNL  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4532  DNSDI  4546
             D+SDI
Sbjct  146   DDSDI  150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  5516  MAGRSGDSDE  5545
             M G  GDSD+
Sbjct  190   MQG--GDSDD  197


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  552  EELRSLYNT  578
            EEL   Y+T
Sbjct  84   EELQKQYDT  92


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  8397  RMRRAEP  8417
             R R  EP
Sbjct  233   RVRKSEP  239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6110  QSLKPC  6127
             QS  PC
Sbjct  69    QSVRPC  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2232  KFQKL  2246
             KFQ L
Sbjct  96    KFQNL  100


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8326  FQALSY  8309
             FQ L Y
Sbjct  97    FQNLTY  102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8802  LSYLAQ  8785
             L YL Q
Sbjct  100   LTYLEQ  105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2386  RRVKK  2400
             RRV K
Sbjct  232   RRVRK  236


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  3945  LQSTCPC-M  3922
             LQS  PC M
Sbjct  68    LQSVRPCFM  76


>ref|NP_002021.3|  N-formyl peptide receptor 3 [Homo sapiens]
Length=353

 GENE ID: 2359 FPR3 | formyl peptide receptor 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 4/16 (25%)
 Frame = +2

Query  3503  TDTTN----QKTELQA  3538
             TDTT     + TELQA
Sbjct  337   TDTTSASPPEETELQA  352


 Score = 23.5 bits (48),  Expect =   302
 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 16/34 (47%)
 Frame = -2

Query  450  CL-PILYV---------LIYIFSFP--L--ALTE  391
            CL PILYV         L  I S P  L  ALTE
Sbjct  296  CLNPILYVFMGRNFQERL--IRSLPTSLERALTE  327


 Score = 21.8 bits (44),  Expect =   981
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F+CW+P
Sbjct  251   FICWFP  256


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  2441  FSVPLDE  2461
             FS+PL+E
Sbjct  5     FSIPLNE  11


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -2

Query  4875  VCYI-------SFSSIL  4846
             +CY        SFS IL
Sbjct  62    ICYLNLALADFSFSAIL  78


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  7775  NL--PIYLIPII  7746
             NL   +YLI II
Sbjct  108   NLFVSVYLITII  119


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -1

Query  1339  FKIVLQ-SGFAFWT  1301
             F IVL    F FWT
Sbjct  152   FTIVLTLPNFIFWT  165


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             T S SPPE+
Sbjct  339   TTSASPPEE  347


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7675  NFSVPL  7658
             NFS+PL
Sbjct  4     NFSIPL  9


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = -2

Query  6471  LNV--------LLLHFRI  6442
             LNV        L LHF I
Sbjct  191   LNVFITMAKVFLILHFII  208


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1334  NSLTIWV  1314
             N L IWV
Sbjct  44    NGLVIWV  50


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  7681  IVNFSVPL  7658
             I+ FSVP+
Sbjct  207   IIGFSVPM  214


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  5925  RV---VVASF  5905
             RV   VVASF
Sbjct  241   RVFAAVVASF  250


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1315  FAFW  1304
             FAFW
Sbjct  180   FAFW  183


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 19/39 (48%)
 Frame = +2

Query  2477  TAFTIPSINNETPGIRYQYNVLPQGWKGSPA------IF  2575
             T F IP   NET        VLP+     PA      IF
Sbjct  3     TNFSIP--LNETE------EVLPE-----PAGHTVLWIF  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +2

Query  5765  VAMRVKEK  5788
             VAMR  EK
Sbjct  85    VAMR--EK  90


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = -1

Query  2650  IHVLID-NYVWILF  2612
             +HV+ID N    LF
Sbjct  101   VHVMIDIN----LF  110


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6137  LILHMALGF  6111
             LILH   GF
Sbjct  202   LILHFIIGF  210


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1451  ICYL  1440
             ICYL
Sbjct  62    ICYL  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2957  ALTEV  2971
             ALTEV
Sbjct  324   ALTEV  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2653  IIHVLID  2633
             II VLI+
Sbjct  279   IILVLIN  285


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5875  GHSLLW  5892
             GH  LW
Sbjct  21    GHTVLW  26


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7193  MRDNW  7207
             MR+ W
Sbjct  87    MREKW  91


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1853  LKEALLD  1873
             LKE LL+
Sbjct  268   LKEMLLN  274


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1026  VLSSGLV  1006
             VL  GLV
Sbjct  41    VLGNGLV  47


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1118  NFSYW  1104
             NF +W
Sbjct  179   NFAFW  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5868  FSVALQII  5845
             FSV + II
Sbjct  210   FSVPMSII  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1279  FFTSC  1265
             FF SC
Sbjct  292   FFNSC  296


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1707  PPEE  1718
             PPEE
Sbjct  344   PPEE  347


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3089  ASVFLLL  3069
             A VFL L
Sbjct  198   AKVFLIL  204


 Score = 15.1 bits (28),  Expect(2) = 60084
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7113  FDEHLI  7096
             F E LI
Sbjct  309   FQERLI  314


 Score = 15.1 bits (28),  Expect(2) = 60084
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7017  RVIVSLPSVL  6988
             R I SLP  L
Sbjct  312   RLIRSLPTSL  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5548  LFVAV  5534
             LFV V
Sbjct  109   LFVSV  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5876  VTVYYGV  5896
             +TV YG+
Sbjct  217   ITVCYGI  223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5676  VHSNHRI  5696
             +H NH I
Sbjct  228   IHRNHMI  234


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  5831  LLGMLM  5848
             L G LM
Sbjct  259   LIGILM  264


>sp|O43557.1|TNF14_HUMAN  RecName: Full=Tumor necrosis factor ligand superfamily member 
14; AltName: Full=Herpes virus entry mediator ligand; Short=Herpesvirus 
entry mediator ligand; Short=HVEM-L; AltName: CD_antigen=CD258; 
Contains: RecName: Full=Tumor necrosis factor 
ligand superfamily member 14, membrane form; Contains: RecName: 
Full=Tumor necrosis factor ligand superfamily member 
14, soluble form
Length=240

 GENE ID: 8740 TNFSF14 | tumor necrosis factor (ligand) superfamily, member 14
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/27 (40%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
 Frame = -3

Query  1208  FLWSLSY------VQNAGRAIHSYYFI  1146
             FL  LSY      V  AG     YY+I
Sbjct  122   FLRGLSYHDGALVVTKAG-----YYYI  143


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6566  AEEEVVIR  6589
             A EEVV+R
Sbjct  211   AGEEVVVR  218


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2357  WEVQLG  2374
             WE QLG
Sbjct  114   WETQLG  119


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  2754  FLSGVVSPHL  2725
             FL GVV  HL
Sbjct  202   FLGGVV--HL  209


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -3

Query  5138  SVA---LGLL  5118
             SVA   LGLL
Sbjct  34    SVARVGLGLL  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8884  NTSLSGS  8864
             N SL GS
Sbjct  102   NSSLTGS  108


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1316  VRILDQ  1299
             VR+LD+
Sbjct  217   VRVLDE  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8681  DLPHTRL  8701
             D P TRL
Sbjct  18    DIPFTRL  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8649  SQRRQ  8663
             S+RRQ
Sbjct  27    SHRRQ  31


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3913  RRSH  3924
             RRSH
Sbjct  87    RRSH  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5884  LLWGT  5898
             LLW T
Sbjct  112   LLWET  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2371  RNTTSRRV  2394
             R T S RV
Sbjct  189   RATSSSRV  196


>ref|NP_001703.2|  carcinoembryonic antigen-related cell adhesion molecule 1 isoform 
1 precursor [Homo sapiens]
Length=526

 GENE ID: 634 CEACAM1 | carcinoembryonic antigen-related cell adhesion molecule
1 (biliary glycoprotein) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8957  LLTSSLLQGTFRW  8995
             LLT SLL  TF W
Sbjct  19    LLTASLL--TF-W  28


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/13 (69%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = +2

Query  3857  LPPVVAK-EIVAS  3892
             L PVVAK +I AS
Sbjct  321   LSPVVAKPQIKAS  333


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8889  TLTLLS  8872
             TLTLLS
Sbjct  199   TLTLLS  204


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             VNLTC
Sbjct  344   VNLTC  348


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2531  YNVLPQ  2548
             YN LPQ
Sbjct  416   YNALPQ  421


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  7904  YSPLSFQTHLPT  7939
             YS L F+ + PT
Sbjct  493   YSTLNFEAQQPT  504


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6614  KTIIV  6628
             KTIIV
Sbjct  314   KTIIV  318


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1430  SNEPSNK  1450
             SN+P NK
Sbjct  481   SNDPPNK  487


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4043  PAETGQETAY  4072
             PA  G ET Y
Sbjct  93    PANSGRETIY  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6092  YPHASVL  6072
             YP AS L
Sbjct  102   YPNASLL  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -1

Query  520  PSICLQPSDVSNRPGLTAN  464
            P I   PSD   RPG  AN
Sbjct  240  PTIS--PSDTYYRPG--AN  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7669  SVPLHPGRV  7643
             S PLH  RV
Sbjct  5     SAPLHRVRV  13


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  5828  WCPISTPIS  5802
             WC +  PIS
Sbjct  395   WCEVFNPIS  403


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             PV LNV
Sbjct  228   PVTLNV  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4147  STGEIAAIV  4121
             S G IA IV
Sbjct  426   SPGAIAGIV  434


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1296  LLVQN  1310
             LL+QN
Sbjct  107   LLIQN  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  948  INEEA  962
            +NEEA
Sbjct  130  VNEEA  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8690  VVDPQIK  8670
             V  PQIK
Sbjct  325   VAKPQIK  331


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6554  LTAVELI  6534
             LTA E I
Sbjct  513   LTATEII  519


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3638  SELVNQ  3655
             S+LVN+
Sbjct  127   SDLVNE  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3792  SIPSKNS  3772
             SI S NS
Sbjct  148   SISSNNS  154


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9098  NQRDPV  9081
             NQ DP+
Sbjct  405   NQSDPI  410


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND G Y C
Sbjct  208   NDTGPYEC  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7103  CSSNITG  7123
             CS N TG
Sbjct  348   CSTNDTG  354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8688  GRSTDQ  8671
             GR  DQ
Sbjct  458   GRASDQ  463


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  468   EHKPS  472


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7448  EAQQ  7459
             EAQQ
Sbjct  499   EAQQ  502


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2077  NLSQQ  2063
             NL QQ
Sbjct  57    NLPQQ  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6935  QLFNSTWF  6958
             QLF   W+
Sbjct  61    QLFGYSWY  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  8902  LSNLHSNTSLS  8870
             LS  + NT LS
Sbjct  374   LS--QGNTTLS  382


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4800  DPNML  4786
             DP ML
Sbjct  408   DPIML  412


>ref|NP_057465.1|  three prime repair exonuclease 1 isoform a [Homo sapiens]
Length=369

 GENE ID: 11277 TREX1 | three prime repair exonuclease 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 11/26 (42%)
 Frame = -1

Query  9028  VPPRPRL---------PGK--SPAES  8984
             VPP PR          PGK  SPA S
Sbjct  112   VPPPPRVVDKLSLCVAPGKACSPAAS  137


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  630  PWCLLSLSFDAHN  592
            PWCL      AHN
Sbjct  173  PWCLV-----AHN  180


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2518  PWCLI  2504
             PWCL+
Sbjct  173   PWCLV  177


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +1

Query  8056  PVPLQLPPLERLTL  8097
             P PL  PPL  LTL
Sbjct  24    PTPL--PPLRILTL  35


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  579  VATLY  593
            VATLY
Sbjct  356  VATLY  360


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  7103  CS---SNITGL  7126
             CS   S ITGL
Sbjct  132   CSPAASEITGL  142


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1329  SYNLGS  1312
             SY LGS
Sbjct  231   SYSLGS  236


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8591  CLVSH  8577
             CLV H
Sbjct  175   CLVAH  179


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  22    PPPTP  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1483  KLPLCI  1466
             KL LC+
Sbjct  121   KLSLCV  126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7269  RQREEWC  7289
             RQ + WC
Sbjct  169   RQPQPWC  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  2570  LLVILSIPV  2544
             LL IL   V
Sbjct  348   LLAILTLAV  356


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  5821  PSP--PPSPQV  5795
             P P  PP P V
Sbjct  108   PPPTVPPPPRV  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5496  CYETNLA  5476
             C++ NLA
Sbjct  154   CFDDNLA  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  428  KTYSMG  445
            K YS+G
Sbjct  230  KSYSLG  235


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6542  ELILLA  6525
             EL LLA
Sbjct  88    ELCLLA  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  8313  LILLGMWRIALQAP  8272
             L LL   R AL+ P
Sbjct  89    LCLLAVHRCALESP  102


>ref|NP_001171742.1|  carcinoembryonic antigen-related cell adhesion molecule 1 isoform 
4 precursor [Homo sapiens]
Length=430

 GENE ID: 634 CEACAM1 | carcinoembryonic antigen-related cell adhesion molecule
1 (biliary glycoprotein) [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = +2

Query  8957  LLTSSLLQGTFRW  8995
             LLT SLL  TF W
Sbjct  19    LLTASLL--TF-W  28


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8889  TLTLLS  8872
             TLTLLS
Sbjct  199   TLTLLS  204


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  7904  YSPLSFQTHLPT  7939
             YS L F+ + PT
Sbjct  397   YSTLNFEAQQPT  408


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7909  TIIVSD  7926
             TIIV D
Sbjct  315   TIIVTD  320


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6614  KTIIV  6628
             KTIIV
Sbjct  314   KTIIV  318


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1430  SNEPSNK  1450
             SN+P NK
Sbjct  385   SNDPPNK  391


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4043  PAETGQETAY  4072
             PA  G ET Y
Sbjct  93    PANSGRETIY  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6092  YPHASVL  6072
             YP AS L
Sbjct  102   YPNASLL  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -1

Query  520  PSICLQPSDVSNRPGLTAN  464
            P I   PSD   RPG  AN
Sbjct  240  PTIS--PSDTYYRPG--AN  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7669  SVPLHPGRV  7643
             S PLH  RV
Sbjct  5     SAPLHRVRV  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             PV LNV
Sbjct  228   PVTLNV  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4147  STGEIAAIV  4121
             S G IA IV
Sbjct  330   SPGAIAGIV  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1296  LLVQN  1310
             LL+QN
Sbjct  107   LLIQN  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  948  INEEA  962
            +NEEA
Sbjct  130  VNEEA  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6554  LTAVELI  6534
             LTA E I
Sbjct  417   LTATEII  423


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3638  SELVNQ  3655
             S+LVN+
Sbjct  127   SDLVNE  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3792  SIPSKNS  3772
             SI S NS
Sbjct  148   SISSNNS  154


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND G Y C
Sbjct  208   NDTGPYEC  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8688  GRSTDQ  8671
             GR  DQ
Sbjct  362   GRASDQ  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  372   EHKPS  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7448  EAQQ  7459
             EAQQ
Sbjct  403   EAQQ  406


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2077  NLSQQ  2063
             NL QQ
Sbjct  57    NLPQQ  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6935  QLFNSTWF  6958
             QLF   W+
Sbjct  61    QLFGYSWY  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2534  NVLPQ  2548
             N LPQ
Sbjct  321   NALPQ  325


>pdb|1FH5|H  Chain H, Crystal Structure Of The Fab Fragment Of The Monoclonal 
Antibody Mak33
Length=198


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  3193  TINRGSAKNN  3222
             TI R  AKNN
Sbjct  63    TISRDNAKNN  72


 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = -2

Query  4053  VSAG-ITSASIYPLA  4012
             VSA   T  S+YPLA
Sbjct  106   VSAAKTTPPSVYPLA  120


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5109  SIYPLSV  5089
             S+YPL V
Sbjct  115   SVYPLAV  121


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8697  GYFPD  8711
             GYFP+
Sbjct  129   GYFPE  133


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  6662  LYN*FLQMCS  6633
             LY   LQM S
Sbjct  73    LY---LQMSS  79


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5927  FCASDAKAY  5953
             +CA DA  Y
Sbjct  89    YCARDAMDY  97


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7482  QTVSCN  7465
             +TV CN
Sbjct  176   ETVTCN  181


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3409  FCSYY  3395
             F SYY
Sbjct  23    FSSYY  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2362  FPEVLSS  2342
             FP VL S
Sbjct  151   FPAVLQS  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  16    CAASGF  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6589  SNYYLF  6572
             S YY++
Sbjct  24    SSYYMY  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6025  YYFLWV  6008
             YY  WV
Sbjct  26    YYMYWV  31


>sp|Q9UQF0.1|ENW1_HUMAN  RecName: Full=HERV-W_7q21.2 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein gPr73; AltName: Full=HERV-7q 
Envelope protein; AltName: Full=HERV-W envelope protein; 
AltName: Full=Syncytin; AltName: Full=Syncytin-1; AltName: 
Full=Enverin; AltName: Full=Env-W; Contains: RecName: Full=Surface 
protein; Short=SU; AltName: Full=gp50; Contains: RecName: 
Full=Transmembrane protein; Short=TM; AltName: Full=gp24; 
Flags: Precursor
Length=538

 GENE ID: 30816 ERVWE1 | endogenous retroviral family W, env(C7), member 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  4790  CCYY--QSSI  4767
             CCYY  QS I
Sbjct  404   CCYYVNQSGI  413


 Score = 21.4 bits (43),  Expect(2) =   279
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 10/21 (47%)
 Frame = -3

Query  6887  LQFLGP-----LLRIA*RLLF  6840
             L FLGP     LL     LLF
Sbjct  449   LPFLGPLAAIILL-----LLF  464


 Score = 19.3 bits (38),  Expect(2) =   279
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -2

Query  6849  IIVLLFPNCSLNLL  6808
             I  LLF  C  NLL
Sbjct  459   ILLLLFGPCIFNLL  472


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3158  HIFLF  3144
             HIFLF
Sbjct  6     HIFLF  10


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 6/22 (27%)
 Frame = -1

Query  850  NMGIT--SGL---KAFSSTTFT  800
            N+ IT  S L   K FS TT+T
Sbjct  226  NLEITHTSNLTCVK-FSNTTYT  246


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6398  RIPLDRP  6378
             R PLDRP
Sbjct  499   RRPLDRP  505


 Score = 19.7 bits (39),  Expect(2) =  2777
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4316  ILPFV  4302
             ILPFV
Sbjct  320   ILPFV  324


 Score = 16.8 bits (32),  Expect(2) =  2777
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4231  FYYSL  4217
             FYY L
Sbjct  346   FYYKL  350


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -1

Query  1954  TSNSPYH-F-W  1928
             TS SPY+ F W
Sbjct  29    TSSSPYQEFLW  39


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  1162  ILTILFNPRIIHLL  1121
             IL  LF P I  LL
Sbjct  459   ILLLLFGPCIFNLL  472


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 11/32 (34%)
 Frame = +2

Query  2060  NLLTQIGCTLNFPISPIETVPVKLKPGMDGPK  2155
             NLL       NF  S IE   VKL   M+ PK
Sbjct  470   NLL------VNFVSSRIEA--VKLQ--ME-PK  490


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3586  CYYV  3575
             CYYV
Sbjct  405   CYYV  408


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  2012  IGT--VLVGP  2035
             I T  VLVGP
Sbjct  213   INTTSVLVGP  222


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8338  IRWV  8349
             IRWV
Sbjct  252   IRWV  255


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7011  IVSLPSVLF  6985
             IV LPS  F
Sbjct  261   IVCLPSGIF  269


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2715  CLSSSIF  2695
             CL S IF
Sbjct  263   CLPSGIF  269


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1940  LSFLV  1926
             LSFLV
Sbjct  290   LSFLV  294


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6882  ISGSPPED  6859
             I G PPE+
Sbjct  515   IKGTPPEE  522


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = +3

Query  552  EELR------SLYNTVATL  590
            E LR      SL+NT  TL
Sbjct  156  ETLRTHTRLVSLFNT--TL  172


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6039  VTFTNTT  6019
             V F NTT
Sbjct  238   VKFSNTT  244


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7015  PPMQNKT  7035
             P MQ KT
Sbjct  489   PKMQSKT  495


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1593  LPFHI  1579
             LP+HI
Sbjct  3     LPYHI  7


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4652  KFSKTPY  4672
             KFS T Y
Sbjct  239   KFSNTTY  245


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2757  CFLSGVVSP  2731
             CFLS  V P
Sbjct  288   CFLSFLVPP  296


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  552  EELRSLYNT  578
            EELR   NT
Sbjct  430  EELR---NT  435


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +1

Query  1528  KGTQP-EI--AGPL  1560
             KGT P EI  A PL
Sbjct  516   KGTPPEEISAAQPL  529


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  184  PL---LEIFHT  161
            PL   LEI HT
Sbjct  222  PLVSNLEITHT  232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2846  CLFL  2835
             CLFL
Sbjct  397   CLFL  400


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1766  LLLLRGSC  1743
             LLLL G C
Sbjct  460   LLLLFGPC  467


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3933  CPCMAS  3916
             C CM S
Sbjct  25    CRCMTS  30


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = -1

Query  8902  LSNLH----------S--NTSLSG  8867
             LS LH          S  NT L G
Sbjct  151   LSKLHETLRTHTRLVSLFNTTLTG  174


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  630  PWCLLS  613
            PW LLS
Sbjct  437  PWGLLS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8690  HTRL  8701
             HTRL
Sbjct  161   HTRL  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8204  VSLLNAT  8224
             VSL N T
Sbjct  165   VSLFNTT  171


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4565  KAKIIRD  4585
             K K IRD
Sbjct  417   KVKEIRD  423


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2420  VLLLIF  2403
             +LLL F
Sbjct  459   ILLLLF  464


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  1816  PKSDLREVKG  1787
             P SD  ++KG
Sbjct  508   PRSDVNDIKG  517


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6535  INSTAV  6552
             IN T V
Sbjct  213   INTTSV  218


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  4767  PLVGCVLLNLF  4735
             PL   +LL LF
Sbjct  454   PLAAIILLLLF  464


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  57   PLLKP  71
            PLL P
Sbjct  528  PLLRP  532


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9142  PLLKP  9156
             PLL P
Sbjct  528   PLLRP  532


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4439  NFRVY  4453
             NFR Y
Sbjct  193   NFRPY  197


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5853  VVLQ  5864
             VVLQ
Sbjct  378   VVLQ  381


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6554  LTAVELILL  6528
             L A+ L LL
Sbjct  455   LAAIILLLL  463


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7459  LLRLNS  7442
             LLR NS
Sbjct  529   LLRPNS  534


>ref|NP_002891.1|  retinol-binding protein 3 precursor [Homo sapiens]
Length=1247

 GENE ID: 5949 RBP3 | retinol binding protein 3, interstitial [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  2359  PEVLSSLIKFS  2327
             PEV   LIKFS
Sbjct  1022  PEVFEELIKFS  1032


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  2034  GPTNTVPIALC  2002
             GPT  +PI LC
Sbjct  1087  GPTSSIPI-LC  1096


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  1378  VIISSSVAAG  1349
             VI  SSV AG
Sbjct  1140  VILTSSVTAG  1149


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  3762  IPALTNLS  3739
             +PALT LS
Sbjct  102   VPALTSLS  109


 Score = 20.2 bits (40),  Expect(2) =  1447
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3171  PLILAYF  3151
             PL L YF
Sbjct  490   PLLLSYF  496


 Score = 17.2 bits (33),  Expect(2) =  1447
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3180  VWAPL  3166
             VW PL
Sbjct  464   VWEPL  468


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  7718  AILQLRSVL  7692
             AIL LRS L
Sbjct  318   AILTLRSAL  326


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4761  LGDARLVI  4784
             L D RLVI
Sbjct  82    LNDPRLVI  89


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 8/29 (27%)
 Frame = +3

Query  846  M-FSAL-SEGATPQDLNTMLNTVGGHQAA  926
            M FS   SE    +DL T LN   G QAA
Sbjct  357  MDFSTVVSE----EDLVTKLNA--GLQAA  379


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2644  VLIDNY  2627
             VL DNY
Sbjct  34    VLLDNY  39


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  7937  LGGGSET  7917
             LGGGS+T
Sbjct  289   LGGGSQT  295


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4863  RYSTQ  4877
             RYSTQ
Sbjct  530   RYSTQ  534


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -1

Query  5824  APSPP---PSPQ  5798
             AP PP   PSP+
Sbjct  713   APPPPPAVPSPE  724


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  7564  ATPNPQEL--LI  7535
             A P P+EL  LI
Sbjct  719   AVPSPEELTYLI  730


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  9058  MQDL-RA  9041
             MQDL RA
Sbjct  859   MQDLQRA  865


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6560  SLAEEE  6577
             SL EEE
Sbjct  107   SLSEEE  112


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  3038  VL----VLLESLCF  3009
             VL    VLL+  CF
Sbjct  28    VLDMAKVLLDNYCF  41


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7420  AAEQFA  7437
             AAE+FA
Sbjct  548   AAEEFA  553


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  8963  TSSLL-----QGTFR  8992
             TS LL     QG +R
Sbjct  660   TSALLRAKLAQGAYR  674


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
 Frame = -2

Query  2046  LTGVGPTNTVPI--AL  2005
             L GV P  TVP   AL
Sbjct  909   LAGVEPDITVPMSEAL  924


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  483  LLETSEG  503
            LL+T EG
Sbjct  581  LLDTPEG  587


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3623  PDQSESEL  3646
             PD S SEL
Sbjct  1115  PDDSVSEL  1122


 Score = 16.8 bits (32),  Expect(2) = 17446
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1972  LSYF  1961
             LSYF
Sbjct  493   LSYF  496


 Score = 15.1 bits (28),  Expect(2) = 17446
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  2034  GPTNTVP  2014
             GP   VP
Sbjct  484   GPSSAVP  490


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +1

Query  6871  GPRNCNAQF*LWRGIFLL  6924
             GPR    Q    RG++LL
Sbjct  528   GPRY-STQ----RGVYLL  540


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 10/38 (26%)
 Frame = +3

Query  756  QMVHQAISPRTLNAW-VKVVEEKAFSPEV-IPMFSALS  863
            QM   A S  T  AW    VE     P++ +PM  ALS
Sbjct  896  QM---AMSATTGKAWDLAGVE-----PDITVPMSEALS  925


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  27   AWELSG  44
            AW+L G
Sbjct  906  AWDLAG  911


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9112  AWELSG  9129
             AW+L G
Sbjct  906   AWDLAG  911


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6912  NFSTVI  6929
             +FSTV+
Sbjct  358   DFSTVV  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4920  FDCFSDSAI  4946
             FD F D  +
Sbjct  444   FDSFADASV  452


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5815  PPPSPQV  5795
             PPP P V
Sbjct  714   PPPPPAV  720


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  959  FLIDGLF  939
            +LI+ LF
Sbjct  728  YLIEALF  734


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6077  VLPC  6066
             VLPC
Sbjct  301   VLPC  304


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6856  LKDY  6845
             LKDY
Sbjct  337   LKDY  340


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5351  RYSTE  5365
             RYST+
Sbjct  530   RYSTQ  534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1736  YPRPE  1722
             Y RPE
Sbjct  651   YARPE  655


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  14    RPDLSLGALW  43
             RPD S   LW
Sbjct  1114  RPDDSVSELW  1123


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  9099  RPDLSLGALW  9128
             RPD S   LW
Sbjct  1114  RPDDSVSELW  1123


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5537  SDEEL  5551
             S+EEL
Sbjct  109   SEEEL  113


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  1686  SRPEPTAPPEES  1721
             S P P A  E+S
Sbjct  397   SWPAPDAAAEDS  408


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8198  SAVSLL  8215
             SAV LL
Sbjct  487   SAVPLL  492


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8825  VLSFI  8811
             VL FI
Sbjct  595   VLTFI  599


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DKAQ+
Sbjct  624   DKAQE  628


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218  PEEL  229
            PEEL
Sbjct  723  PEEL  726


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7420  AAEQFA  7437
             AAE FA
Sbjct  851   AAEAFA  856


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3955  MATRL  3969
             MAT L
Sbjct  961   MATKL  965


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8059  VPLQLP  8076
             VP+Q P
Sbjct  1015  VPMQIP  1020


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2063  LLTQI  2077
             LLTQ+
Sbjct  1055  LLTQV  1059


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  552   FAFLM  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1807  DLREVKG  1787
             DL EV G
Sbjct  689   DLQEVSG  695


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6137  LILHMA  6120
             L+L MA
Sbjct  27    LVLDMA  32


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6662  RPNNNT  6679
             RP N T
Sbjct  202   RPSNTT  207


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3810  MRNITVIGE  3836
             MR   V+GE
Sbjct  249   MRRAIVVGE  257


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  537  LQTGSEELR  563
            LQ  SE+ R
Sbjct  376  LQAASEDPR  384


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2304  LVLSFF  2287
             L LS+F
Sbjct  491   LLLSYF  496


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5441  VPIAIV  5458
             VP AIV
Sbjct  612   VPDAIV  617


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7377  VIEAAP  7360
             V+E AP
Sbjct  709   VVEEAP  714


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3659  IEQLIKKE  3682
             IE L K E
Sbjct  730   IEALFKTE  737


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5756  QKTVAMRVK  5782
             Q  VA+R K
Sbjct  928   QDIVALRAK  936


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1186  SRMLV  1172
             SR+LV
Sbjct  1060  SRLLV  1064


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7816  KIIHND  7833
             KI H D
Sbjct  1070  KIMHTD  1075


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2706  SSIFVLC  2686
             SSI +LC
Sbjct  1090  SSIPILC  1096


>ref|NP_110391.2|  Fc receptor-like protein 2 precursor [Homo sapiens]
Length=508

 GENE ID: 79368 FCRL2 | Fc receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 8/22 (36%)
 Frame = -1

Query  7609  TSIPRHSSGANEFSRATPNPQE  7544
             T  PR   GA   SR  PNPQE
Sbjct  432   TNEPR---GA---SR--PNPQE  445


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6398  RIPLDRPV  6375
             RIP  RPV
Sbjct  294   RIPVSRPV  301


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5125  VFWGLF  5108
             V WGLF
Sbjct  401   VLWGLF  406


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  1     MLLW  4


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2604  LLENK  2618
             LLENK
Sbjct  492   LLENK  496


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3095  APASVF  3078
             AP SVF
Sbjct  24    APSSVF  29


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +3

Query  6366  QSL----HRPVQRYPLS  6404
             QSL    H  VQR P S
Sbjct  189   QSLQSQIH--VQRIPIS  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2701  YFCS  2690
             YFCS
Sbjct  80    YFCS  83


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3110  YQIYQE  3127
             YQ Y+E
Sbjct  332   YQFYHE  337


 Score = 17.2 bits (33),  Expect(2) = 14530
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8886  LTLLSPG  8866
             LTL SPG
Sbjct  302   LTLRSPG  308


 Score = 15.9 bits (30),  Expect(2) = 14530
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8969  SMSAVLEV  8946
             S+SA LE+
Sbjct  255   SLSAELEI  262


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7380  SVIEAAPIVL  7351
             SV E   IVL
Sbjct  27    SVFEGDSIVL  36


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5108  PSILCQF  5088
             P IL QF
Sbjct  328   PPILYQF  334


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3697  MGTSTQR  3717
             MG  TQR
Sbjct  248   MGKKTQR  254


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -3

Query  8828  GVLSFIG---LFY  8799
             GVL F G   L Y
Sbjct  407   GVLGFTGVALLLY  419


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  117  LCDSGN  134
            L DSGN
Sbjct  74   LSDSGN  79


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  484  RPGLTANRSS  455
            RP LTA  SS
Sbjct  108  RPVLTA--SS  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -2

Query  3759  PALTNLSTCSFPPI  3718
             P LT     SF PI
Sbjct  109   PVLT---ASSFQPI  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6401  QRIP  6390
             QRIP
Sbjct  198   QRIP  201


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8140  GSPQIL  8157
             GSP IL
Sbjct  326   GSPPIL  331


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  8177  WS--QELKNSAV  8206
             WS   EL  SAV
Sbjct  156   WSSSPELQISAV  167


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7910  VNIP  7899
             VNIP
Sbjct  289   VNIP  292


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2439  YASPT  2425
             Y SPT
Sbjct  448   YSSPT  452


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8215  EQANS  8201
             EQA+S
Sbjct  15    EQADS  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2537  VLPQGWKGSP  2566
             VL  GW  SP
Sbjct  151   VLGSGWSSSP  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8024  IRSLIE  8007
             IR L E
Sbjct  489   IRTLLE  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2417  LLLIF  2403
             LL IF
Sbjct  6     LLVIF  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  6019  FLW  6011
             FLW
Sbjct  89    FLW  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7195  HISSSRSED  7169
             +IS   SED
Sbjct  163   QISAVWSED  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6878  EIVTH  6892
             E VTH
Sbjct  180   ETVTH  184


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3252  LLNLNC  3269
             LL L C
Sbjct  316   LLELHC  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  257  LQQAES  240
            +QQ ES
Sbjct  480  MQQPES  485


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2187  IFSSV  2173
             I+SSV
Sbjct  501   IYSSV  505


>ref|NP_659508.1|  cytokine-inducible SH2-containing protein isoform 2 [Homo sapiens]
Length=258

 GENE ID: 1154 CISH | cytokine inducible SH2-containing protein [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1085  HPSYLF  1068
             HPSYLF
Sbjct  111   HPSYLF  116


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  3459  AFPNLVSL  3436
             AFP+ VSL
Sbjct  152   AFPDVVSL  159


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -1

Query  5839  PKEHGAPS------PPP  5807
             PKE  APS      PPP
Sbjct  187   PKE-DAPSDPALPAPPP  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7511  LAVER  7525
             LAVER
Sbjct  12    LAVER  16


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7448  EAQQHL  7465
             EA QHL
Sbjct  91    EARQHL  96


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9043  PSDPA  9057
             PSDPA
Sbjct  192   PSDPA  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  8649  SELALPVPP  8623
             S+ ALP PP
Sbjct  193   SDPALPAPP  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3623  PDQSESE  3643
             P Q ESE
Sbjct  51    PAQTESE  57


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7071  CMPLP  7085
             C+PLP
Sbjct  240   CLPLP  244


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7407  DNNCL  7393
             D NCL
Sbjct  141   DSNCL  145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2368  LNFPEVLS  2345
             L FP+V S
Sbjct  151   LAFPDVVS  158


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  4556  PRRKAKIIRDY  4588
             PRR A   R Y
Sbjct  244   PRRMADYLRQY  254


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6165  VHFKLTQ  6145
             VH KL Q
Sbjct  206   VHLKLVQ  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1691  TRANSP  1708
             TR +SP
Sbjct  171   TRSDSP  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3379  VRERTH  3396
             VR+ TH
Sbjct  106   VRDSTH  111


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5218  PNPRKMSN  5195
             P PR M +
Sbjct  242   PLPRRMAD  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8154  YLRAS  8140
             YLR S
Sbjct  76    YLRES  80


>ref|NP_000957.1|  retinoic acid receptor gamma isoform 1 [Homo sapiens]
Length=454

 GENE ID: 5916 RARG | retinoic acid receptor, gamma [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             PSPPP P V
Sbjct  78    PSPPPPPRV  86


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  219  GFPFAF  202
            GFPFAF
Sbjct  24   GFPFAF  29


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1833  VTRGRCQ  1813
             VTR RCQ
Sbjct  137   VTRNRCQ  143


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1471  CIIMVAEF  1448
             CII + EF
Sbjct  237   CIIKIVEF  244


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7061  LLSATCL  7041
             LLSA CL
Sbjct  330   LLSAICL  336


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -1

Query  1639  PKKLACLSV--QS  1607
             PK +A LSV  QS
Sbjct  55    PKEMASLSVETQS  67


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = -3

Query  1655  GRPDLP*K--ISLSLST  1611
             G PDLP K   SLS  T
Sbjct  50    GQPDLP-KEMASLSVET  65


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8665  ISLICG  8682
             I LICG
Sbjct  334   ICLICG  339


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  102  LLEAL  88
            LLEAL
Sbjct  357  LLEAL  361


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4516  PFTFPEEL  4493
             PF FP  L
Sbjct  26    PFAFPGAL  33


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2734  SPPQQMLS  2711
             SPP +MLS
Sbjct  36    SPPFEMLS  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3731  EQVDKL  3748
             E VDKL
Sbjct  348   EKVDKL  353


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4725  PHPRISSE  4748
             PHP  SSE
Sbjct  431   PHPNASSE  438


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3557  PAKLDKL  3537
             P K DKL
Sbjct  347   PEKVDKL  353


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  9034  SPVPPRPR  9011
             SP PP PR
Sbjct  79    SP-PPPPR  85


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1270  SCEAC  1256
             SCE C
Sbjct  106   SCEGC  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6582  TTSSSA  6565
             TT SSA
Sbjct  211   TTNSSA  216


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5840  MLMIC  5854
             ML IC
Sbjct  272   MLRIC  276


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4836  PDPNAS  4819
             P PNAS
Sbjct  431   PHPNAS  436


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6622  NSTAEH  6639
             NS A+H
Sbjct  213   NSSADH  218


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6237  TALSISAQ  6260
             T LSI  Q
Sbjct  252   TGLSIADQ  259


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8859  MDDPE  8873
             MDD E
Sbjct  323   MDDTE  327


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3964  RLYTFRR  3984
             RLY  RR
Sbjct  362   RLYARRR  368


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1492  KERL  1503
             KERL
Sbjct  5     KERL  8


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  478  GLTANR  461
            GLT NR
Sbjct  291  GLTLNR  296


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5189  EAVR  5200
             EAVR
Sbjct  158   EAVR  161


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8948  LQELLT  8965
             L+EL T
Sbjct  186   LEELIT  191


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8954  LEVLRM  8937
             LE LR+
Sbjct  358   LEALRL  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1543  EIAGPL  1560
             EI GP+
Sbjct  403   EIPGPM  408


>ref|NP_000549.1|  hemoglobin subunit alpha [Homo sapiens]
Length=142

 GENE ID: 3039 HBA1 | hemoglobin, alpha 1 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 6/29 (20%)
 Frame = -2

Query  4155  LTVAPV--KLLPLSVCIVFT--GHLPANF  4081
             L V PV  KLL  S C   T   HLPA F
Sbjct  92    LRVDPVNFKLL--SHCLLVTLAAHLPAEF  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8902  LSNLH  8888
             LS+LH
Sbjct  84    LSDLH  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  2359  PEVLSSLIKF  2330
             P V  SL KF
Sbjct  120   PAVHASLDKF  129


>pdb|1WIO|A  Chain A, Structure Of T-Cell Surface Glycoprotein Cd4, Tetragonal 
Crystal Form
 pdb|1WIO|B  Chain B, Structure Of T-Cell Surface Glycoprotein Cd4, Tetragonal 
Crystal Form
 pdb|1WIP|A  Chain A, Structure Of T-Cell Surface Glycoprotein Cd4, Monoclinic 
Crystal Form
 pdb|1WIP|B  Chain B, Structure Of T-Cell Surface Glycoprotein Cd4, Monoclinic 
Crystal Form
 pdb|1WIQ|A  Chain A, Structure Of T-Cell Surface Glycoprotein Cd4, Trigonal 
Crystal Form
 pdb|1WIQ|B  Chain B, Structure Of T-Cell Surface Glycoprotein Cd4, Trigonal 
Crystal Form
Length=363


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  417  FSFPLALT  394
            FSFPLA T
Sbjct  196  FSFPLAFT  203


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6098  SLWDQ  6112
             SLWDQ
Sbjct  60    SLWDQ  64


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3545  LALQDSG  3565
             L LQDSG
Sbjct  149   LELQDSG  155


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = -3

Query  158  LKGSEGSLVTRVTQ  117
            LK  E S V RVTQ
Sbjct  231  LKNKEVS-VKRVTQ  243


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -1

Query  2908  VNLTC------PIQF  2882
             V LTC       IQF
Sbjct  12    VELTCTASQKKSIQF  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 9/17 (52%)
 Frame = +2

Query  4481  KGPAKL---------LW  4504
             KGP KL         LW
Sbjct  46    KGPSKLNDRADSRRSLW  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  739  CRTSRGK  759
            CR  RGK
Sbjct  130  CRSPRGK  136


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4538  SDIKVVP  4558
             S+IKV P
Sbjct  357   SNIKVLP  363


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2222  KEGKISK  2242
             KE K+SK
Sbjct  322   KEAKVSK  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4460  DSRNPLW  4480
             DSR  LW
Sbjct  56    DSRRSLW  62


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +1

Query  4354  VQC---RGK  4371
             VQC   RGK
Sbjct  128   VQCRSPRGK  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1548  CRAPR  1562
             CR PR
Sbjct  130   CRSPR  134


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1946  FPLSF  1932
             FPL F
Sbjct  198   FPLAF  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1277  KLDDR  1291
             KL+DR
Sbjct  50    KLNDR  54


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/6 (50%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6487  TWSCSI  6470
             TW C +
Sbjct  156   TWTCTV  161


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8906  PSISSRGPR  8932
             PS+  R PR
Sbjct  126   PSVQCRSPR  134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  543  TGSEEL  560
            TGS EL
Sbjct  208  TGSGEL  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6644  VEINCT  6661
             VE  CT
Sbjct  12    VELTCT  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3134  KNLK  3145
             KNLK
Sbjct  72    KNLK  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1784  VSFNFP  1801
             V F FP
Sbjct  194   VEFSFP  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  216  FPFAF  202
            FP AF
Sbjct  198  FPLAF  202


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6925  TVEK  6914
             TVEK
Sbjct  203   TVEK  206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3343  KLPL  3332
             KLPL
Sbjct  252   KLPL  255


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8419  AGSARLILSL  8390
             AGS  L L L
Sbjct  267   AGSGNLTLAL  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8149  QILVES  8166
             Q+L ES
Sbjct  352   QVLLES  357


>ref|NP_003256.1|  toll-like receptor 3 precursor [Homo sapiens]
 sp|O15455.1|TLR3_HUMAN  RecName: Full=Toll-like receptor 3; AltName: CD_antigen=CD283; 
Flags: Precursor
Length=904

 GENE ID: 7098 TLR3 | toll-like receptor 3 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = -2

Query  2289  FFMANTGVLYGFSGPIFEIF  2230
             FFM NT +L      IF IF
Sbjct  705   FFMINTSIL-----LIF-IF  718


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  6465  VLLLHF---RI  6442
             VLL HF   RI
Sbjct  720   VLLIHFEGWRI  730


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5306  LFIHFQNW  5329
             L IHF+ W
Sbjct  721   LLIHFEGW  728


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4515  PSPFQ  4501
             PSPFQ
Sbjct  499   PSPFQ  503


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7432  IVLLLHY  7412
             IVLL H+
Sbjct  719   IVLLIHF  725


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8485  QQLPML  8502
             Q LPML
Sbjct  96    QKLPML  101


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  441  ILYVLIYIF  415
            IL  LI+IF
Sbjct  712  IL--LIFIF  718


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  9027  TG-EWRAL  9047
             TG EWR L
Sbjct  448   TGQEWRGL  455


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = +1

Query  8065  LQL--------PPLERLTL  8097
             LQL        P L+RL L
Sbjct  469   LQLTRNSFALVPSLQRLML  487


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2231  KISKI  2245
             KISKI
Sbjct  418   KISKI  422


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6162  HFKLTQ  6145
             H KLTQ
Sbjct  39    HLKLTQ  44


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  3504  LTQ-QIRRL  3527
             LT+ Q RRL
Sbjct  58    LTHNQLRRL  66


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  933  FAWL  922
            FAWL
Sbjct  294  FAWL  297


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1794  TSLRSL  1811
             TSLR L
Sbjct  391   TSLRTL  396


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2478  VYFLK  2464
             +YFLK
Sbjct  555   IYFLK  559


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/20 (30%), Positives = 8/20 (40%), Gaps = 11/20 (55%)
 Frame = -2

Query  2595  IFVMLL-----------WNI  2569
             IF+ LL           WN+
Sbjct  717   IFIVLLIHFEGWRISFYWNV  736


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  353  SIKRGR  370
            SIKR R
Sbjct  806  SIKRSR  811


 Score = 17.2 bits (33),  Expect(2) = 16768
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7820  LFIMI  7834
             LF MI
Sbjct  704   LFFMI  708


 Score = 15.1 bits (28),  Expect(2) = 16768
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7903  IFTIIV  7920
             IF  IV
Sbjct  715   IFIFIV  720


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3965  DCTHL  3979
             DC HL
Sbjct  36    DCSHL  40


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3198  NCFTSL  3181
             N FTSL
Sbjct  388   NSFTSL  393


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3462  PAFPNL  3445
             PAF NL
Sbjct  632   PAFRNL  637


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2216  MEKE  2227
             MEKE
Sbjct  777   MEKE  780


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  4095  LPA-NFKR  4075
             LPA NF R
Sbjct  66    LPAANFTR  73


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  2604  LL-ENKIQ  2624
             LL  NKIQ
Sbjct  177   LLSNNKIQ  184


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6849  SLSNPQ  6866
             SLSN Q
Sbjct  254   SLSNSQ  259


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1278  NWMTET  1295
             NW  ET
Sbjct  659   NWINET  664


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2378  VFLIELP  2358
             VFL E P
Sbjct  850   VFLEEIP  856


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7112  NITGLLLT  7135
             NIT L LT
Sbjct  52    NITVLNLT  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2234  ISKIGPE  2254
             ISK  PE
Sbjct  87    ISKLEPE  93


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3900  LSQLATISFA  3871
             LSQL    FA
Sbjct  111   LSQLSDKTFA  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8812  IKERTPACY  8838
             IKE  P C+
Sbjct  209   IKEFSPGCF  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2501  NNETPGI  2521
             +N+ PGI
Sbjct  364   DNDIPGI  370


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1137  LGLNKI  1154
             LGLN I
Sbjct  438   LGLNEI  443


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  6423  VP---RLVLR  6443
             VP   RL LR
Sbjct  479   VPSLQRLMLR  488


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6176  NDTNTN  6193
             N+T TN
Sbjct  662   NETHTN  667


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  4581  LMIFAF--LL  4558
             L+IF F  LL
Sbjct  713   LLIFIFIVLL  722


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  4232  SMNKE---LK  4252
             SM KE   LK
Sbjct  776   SMEKEDQSLK  785


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  420  YKLKH  434
            YKL H
Sbjct  858  YKLNH  862


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4848  LWRLPDPN  4825
             L RLP  N
Sbjct  63    LRRLPAAN  70


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3209  LPLLIVL  3189
             LP+L VL
Sbjct  98    LPMLKVL  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7471  LQQMLL  7454
             LQ++LL
Sbjct  173   LQELLL  178


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2552  IPVE  2541
             IPVE
Sbjct  577   IPVE  580


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8723  VVLLI  8709
             +VLLI
Sbjct  719   IVLLI  723


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3647  VNQIIEQ  3667
             V Q IEQ
Sbjct  836   VQQAIEQ  842


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7825  HNDSRRL  7845
             HN  RRL
Sbjct  60    HNQLRRL  66


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5203  MSNSF  5189
             +SNSF
Sbjct  386   LSNSF  390


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7471  LQQMLLR  7451
             LQ ++LR
Sbjct  482   LQRLMLR  488


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  6987  ITLKEVTQSPS  7019
             + LK V  SPS
Sbjct  490   VALKNVDSSPS  500


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8329  PFQAL  8315
             PFQ L
Sbjct  501   PFQPL  505


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7461  CCCASIA  7441
             C C SIA
Sbjct  649   CTCESIA  655


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2871  FCMSLT  2854
             FC  LT
Sbjct  121   FCTNLT  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1581  ISNSPF  1564
             I N PF
Sbjct  138   IKNNPF  143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8407  ELSQQQI  8427
             ELS  QI
Sbjct  203   ELSSNQI  209


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6257  TSIR  6268
             TSIR
Sbjct  248   TSIR  251


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3826  TVIFLMFI  3803
             T I L FI
Sbjct  710   TSILLIFI  717


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6846  IVLL  6835
             IVLL
Sbjct  719   IVLL  722


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2081  CTLNFPI  2101
             C LN P+
Sbjct  875   CILNWPV  881


>ref|NP_001036193.1|  retinoic acid receptor gamma isoform 2 [Homo sapiens]
Length=443

 GENE ID: 5916 RARG | retinoic acid receptor, gamma [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             PSPPP P V
Sbjct  67    PSPPPPPRV  75


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1833  VTRGRCQ  1813
             VTR RCQ
Sbjct  126   VTRNRCQ  132


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1471  CIIMVAEF  1448
             CII + EF
Sbjct  226   CIIKIVEF  233


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7061  LLSATCL  7041
             LLSA CL
Sbjct  319   LLSAICL  325


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7440  GLLRR  7454
             GLLRR
Sbjct  24    GLLRR  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8665  ISLICG  8682
             I LICG
Sbjct  323   ICLICG  328


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  102  LLEAL  88
            LLEAL
Sbjct  346  LLEAL  350


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  246  GLLKRA  263
            GLL RA
Sbjct  24   GLLRRA  29


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3731  EQVDKL  3748
             E VDKL
Sbjct  337   EKVDKL  342


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4725  PHPRISSE  4748
             PHP  SSE
Sbjct  420   PHPNASSE  427


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3557  PAKLDKL  3537
             P K DKL
Sbjct  336   PEKVDKL  342


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  9034  SPVPPRPR  9011
             SP PP PR
Sbjct  68    SP-PPPPR  74


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1270  SCEAC  1256
             SCE C
Sbjct  95    SCEGC  99


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6582  TTSSSA  6565
             TT SSA
Sbjct  200   TTNSSA  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5840  MLMIC  5854
             ML IC
Sbjct  261   MLRIC  265


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4836  PDPNAS  4819
             P PNAS
Sbjct  420   PHPNAS  425


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6622  NSTAEH  6639
             NS A+H
Sbjct  202   NSSADH  207


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6237  TALSISAQ  6260
             T LSI  Q
Sbjct  241   TGLSIADQ  248


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8859  MDDPE  8873
             MDD E
Sbjct  312   MDDTE  316


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3964  RLYTFRR  3984
             RLY  RR
Sbjct  351   RLYARRR  357


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  478  GLTANR  461
            GLT NR
Sbjct  280  GLTLNR  285


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2265  LYGFSGP  2245
             LYG  GP
Sbjct  15    LYGAAGP  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5189  EAVR  5200
             EAVR
Sbjct  147   EAVR  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8948  LQELLT  8965
             L+EL T
Sbjct  175   LEELIT  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8954  LEVLRM  8937
             LE LR+
Sbjct  347   LEALRL  352


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1543  EIAGPL  1560
             EI GP+
Sbjct  392   EIPGPM  397


>ref|NP_001318.1|  cancer/testis antigen 1 [Homo sapiens]
Length=180

 GENE ID: 1485 CTAG1B | cancer/testis antigen 1B [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1254  RLLEFY  1237
             RLLEFY
Sbjct  86    RLLEFY  91


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  9059  ISSCFLPV  9082
             I  CFLPV
Sbjct  162   ITQCFLPV  169


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 10/22 (45%)
 Frame = -2

Query  8646  ELA----------LPVPPFLLK  8611
             ELA          LPVP  LLK
Sbjct  103   ELARRSLAQDAPPLPVPGVLLK  124


 Score = 18.9 bits (37),  Expect(2) =  5895
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6462  RRSMEQD  6482
             RRS+ QD
Sbjct  106   RRSLAQD  112


 Score = 16.8 bits (32),  Expect(2) =  5895
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             L LSIS
Sbjct  145   LQLSIS  150


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1777  LSIGSC  1760
             LSI SC
Sbjct  147   LSISSC  152


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8921  RGPRAA  8938
             RGPR A
Sbjct  43    RGPRGA  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1751  PSEAGA  1768
             P EAGA
Sbjct  34    PGEAGA  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1095  PPIPV  1109
             PP PV
Sbjct  114   PPLPV  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3164  FLHIFL  3147
             FL +FL
Sbjct  166   FLPVFL  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9023  AQATPPWKVP  8994
             AQ  PP  VP
Sbjct  110   AQDAPPLPVP  119


>ref|NP_003017.1|  endophilin-A1 [Homo sapiens]
Length=352

 GENE ID: 6456 SH3GL2 | SH3-domain GRB2-like 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
 Frame = -3

Query  3128  ALDKFDMSIGLAPASVFLLL  3069
             AL+KFD S   A  S F LL
Sbjct  186   ALEKFDESKEIAESSMFNLL  205


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2584  HDKNLR  2601
             HDK+LR
Sbjct  147   HDKDLR  152


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4191  LEFPT  4205
             LEFPT
Sbjct  263   LEFPT  267


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = -2

Query  390  FFPID----LI-LP  364
            FFPI+    L+ LP
Sbjct  338  FFPINYVEILVALP  351


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = +2

Query  2453  LDEDF----RK  2473
             LD+DF    RK
Sbjct  29    LDDDFKEMERK  39


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  247  PSPASR  230
            P PASR
Sbjct  60   PNPASR  65


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  1188  IRQGPKEPFRDY  1223
             IRQ   +P R+Y
Sbjct  244   IRQASSQPRREY  255


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1736  YPRPEAL  1716
             YP  EAL
Sbjct  86    YPQAEAL  92


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6674  CCWVLYN  6654
             CC  LY+
Sbjct  294   CCRALYD  300


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5581  EKLDES  5564
             EK DES
Sbjct  188   EKFDES  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = +2

Query  1685  EQTR-ANSPTRRELQ  1726
             E  R A S  RRE Q
Sbjct  242   ERIRQASSQPRREYQ  256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2949  PLRSLHN  2929
             PL  LH+
Sbjct  142   PLQNLHD  148


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5291  ILQQ  5302
             ILQQ
Sbjct  232   ILQQ  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1021  ENQGE  1035
             EN+GE
Sbjct  304   ENEGE  308


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6089  DIISL  6103
             DII L
Sbjct  315   DIITL  319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8517  EAQEEEEVGF  8546
             E + E E GF
Sbjct  302   EPENEGELGF  311


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5773  ESEGE  5787
             E EGE
Sbjct  304   ENEGE  308


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5988  PVYPQ  6002
             P YPQ
Sbjct  84    PGYPQ  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2357  RSLEFSY  2337
             R L+F Y
Sbjct  164   RRLDFDY  170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8312  RQGLE  8326
             RQ LE
Sbjct  184   RQALE  188


>ref|NP_005658.1|  E3 ubiquitin-protein ligase RNF103 [Homo sapiens]
 sp|O00237.1|RN103_HUMAN  RecName: Full=E3 ubiquitin-protein ligase RNF103; AltName: Full=RING 
finger protein 103; AltName: Full=Zinc finger protein 
103 homolog; Short=Zfp-103; AltName: Full=KF-1; Short=hKF-1
Length=685

 GENE ID: 7844 RNF103 | ring finger protein 103 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 13/39 (33%)
 Frame = +2

Query  2789  YELHPD-K---WTVQPIVLPEKDSWTVNDIQKLVGKLNW  2893
             YEL  D K   W VQ I          ND   LVGK  W
Sbjct  108   YELVEDTKDGIWLVQVIA---------NDRSPLVGKIHW  137


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  7766  W-ASLWNWF  7789
             W  SLW+W+
Sbjct  454   WLSSLWDWY  462


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1647  WPSYK  1661
             WPSYK
Sbjct  664   WPSYK  668


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  936  LKETINEEAAE  968
            LKE   EEA E
Sbjct  87   LKE---EEASE  94


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2478  LHLPYL  2495
             L+LPYL
Sbjct  378   LQLPYL  383


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5314  DKQQLLQNS  5288
             DKQ  L+NS
Sbjct  556   DKQSVLHNS  564


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/24 (33%), Positives = 8/24 (33%), Gaps = 14/24 (58%)
 Frame = +1

Query  5215  LAPWLRA--------------TYL  5244
             LA W RA              TYL
Sbjct  402   LASWVRADWMFYSSHPALFLSTYL  425


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  1939  RGNWRFYQS  1965
             R +W FY S
Sbjct  407   RADWMFYSS  415


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 17/35 (48%)
 Frame = -1

Query  1675  FPGL---PL*EGQIFP----KKLA-----CLSVQS  1607
             FP L   PL    I P    K L      CL VQS
Sbjct  495   FPDLWLHPL----I-PTDYIKNLPMWRFKCLGVQS  524


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3131  FKNLKT  3148
             FK LKT
Sbjct  45    FKKLKT  50


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  945  SLLTFAWL  922
            SLL   WL
Sbjct  365  SLLIISWL  372


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  168  KISSSGARTGT  200
            K+S  G RTGT
Sbjct  143  KVSRFGIRTGT  153


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  5288  LL---WLPLL  5268
             LL   WLP L
Sbjct  366   LLIISWLPVL  375


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8026  LGTYLG  8043
             L TYLG
Sbjct  421   LSTYLG  426


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  1796  FPQVTLWQRPLV-T--IK  1840
             FP   LW  PL+ T  IK
Sbjct  495   FPD--LWLHPLIPTDYIK  510


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5758  EDSGNESEGE  5787
             +D  N+SE E
Sbjct  533   QDTENDSESE  542


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1221  YVDRFY----KTLR  1250
             Y D FY    K LR
Sbjct  382   YLDSFYEYSLKLLR  395


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8372  DWMAY  8386
             DWM Y
Sbjct  409   DWMFY  413


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2557  FPSLWKH  2537
             FP LW H
Sbjct  495   FPDLWLH  501


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6977  EGSNNTE  6997
             EGS +TE
Sbjct  530   EGSQDTE  536


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -3

Query  3749  LIYLLVHFLQFLCVL  3705
             L +LL  FL    VL
Sbjct  5     LFFLLLYFL----VL  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6406  WLKGYL  6389
             WLK YL
Sbjct  234   WLKIYL  239


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8844  VSLHGMD  8864
             +SL+ MD
Sbjct  307   ISLQAMD  313


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8304  LGMWR  8290
             L MWR
Sbjct  512   LPMWR  516


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  233  ERAPLV  216
            +R PLV
Sbjct  127  DRSPLV  132


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6862  GLLKDY  6845
             GLL DY
Sbjct  428   GLLIDY  433


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/10 (40%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  4733  WMRAFIVMSI  4704
             W R   +MS+
Sbjct  168   WVRSTLIMSV  177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2440  FFSSL  2454
             FFS L
Sbjct  249   FFSAL  253


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +1

Query  3418  CRW  3426
             CRW
Sbjct  662   CRW  664


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2767  FFLMFFV  2747
             +FL  FV
Sbjct  11    YFLVLFV  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2536  IVLIS  2522
             +VLIS
Sbjct  354   VVLIS  358


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5152  IVWLP  5138
             I WLP
Sbjct  369   ISWLP  373


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  966  LQLP  955
            LQLP
Sbjct  378  LQLP  381


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2780  WMGYELHP  2803
             WM Y  HP
Sbjct  410   WMFYSSHP  417


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2078  QSESTD  2061
             +SE TD
Sbjct  540   ESENTD  545


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4920  FDCFSD  4937
             F+C SD
Sbjct  154   FNCSSD  159


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2624  DIVIY  2638
             DI IY
Sbjct  279   DIGIY  283


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6023  VLVN  6034
             VLVN
Sbjct  332   VLVN  335


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6202  RENDNGE  6222
             R N+N E
Sbjct  440   RNNNNDE  446


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4424  ITKIQNFRV  4450
             I   QNF V
Sbjct  470   IASFQNFPV  478


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8514  LEAQEEEE  8537
             L  Q EEE
Sbjct  520   LGVQSEEE  527


>pdb|1MQ8|A  Chain A, Crystal Structure Of Alphal I Domain In Complex With 
Icam-1
 pdb|1MQ8|C  Chain C, Crystal Structure Of Alphal I Domain In Complex With 
Icam-1
Length=291


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4743  SE--VHIPLGDARL---VITTY  4793
             SE  VH  LGD RL   V  TY
Sbjct  219   SEAQVHLALGDQRLNPTV--TY  238


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  935  VKRDHQ*G---SCR  967
            V RDH+ G   SCR
Sbjct  148  VRRDHH-GANFSCR  160


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = +1

Query  8146  PQILVESPTVLE  8181
             PQ LV SP VLE
Sbjct  192   PQ-LV-SPRVLE  201


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  7878  ESTAKTIL  7855
             +STAKT L
Sbjct  73    QSTAKTFL  80


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6852  LSNPQEGTQ  6878
             LSN QE  Q
Sbjct  54    LSNVQEDSQ  62


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6867  EGTQKL  6884
             EGTQ L
Sbjct  256   EGTQRL  261


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8127  PRSSTILVT  8101
             PR   +LVT
Sbjct  12    PRGGSVLVT  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7807  QPICY  7793
             QP CY
Sbjct  62    QPMCY  66


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7049  WQKVGK  7066
             WQ VGK
Sbjct  97    WQPVGK  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5120  EDQGPQR  5140
             ED+G QR
Sbjct  254   EDEGTQR  260


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7211  FSNCP  7197
             +SNCP
Sbjct  66    YSNCP  70


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2939  LLRGTKAL  2962
             LLRG K L
Sbjct  123   LLRGEKEL  130


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  987  LDALYPI  967
            LD L+P+
Sbjct  212  LDGLFPV  218


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1863  ASFSC  1849
             A FSC
Sbjct  155   ANFSC  159


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  768  QAISPRTL  791
            Q +SPR L
Sbjct  193  QLVSPRVL  200


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9075  KKQLL  9061
             KK+LL
Sbjct  39    KKELL  43


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4241  KELK  4252
             KELK
Sbjct  128   KELK  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6690  SVSREDQG  6713
             SV  ED+G
Sbjct  250   SVTAEDEG  257


>ref|NP_005466.1|  SH2B adapter protein 3 [Homo sapiens]
 sp|Q9UQQ2.2|SH2B3_HUMAN  RecName: Full=SH2B adapter protein 3; AltName: Full=Lymphocyte-specific 
adapter protein Lnk; AltName: Full=Signal transduction 
protein Lnk; AltName: Full=Lymphocyte adapter protein
Length=575

 GENE ID: 10019 SH2B3 | SH2B adaptor protein 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +2

Query  8996  GLSREAWPGRDWGVASP--QILH  9058
             GLS E  PGR     SP  QI H
Sbjct  509   GLSPEGLPGR----SSPPEQIFH  527


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2594  FLSCY  2580
             FLSCY
Sbjct  358   FLSCY  362


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  293  SPVAAPR  273
            SP AAPR
Sbjct  18   SPAAAPR  24


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8652  GSELALP  8632
             GSEL LP
Sbjct  493   GSELGLP  499


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1610  IFHLV  1596
             IFHLV
Sbjct  525   IFHLV  529


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7957  PVGSPRGW  7934
             P   PRGW
Sbjct  19    PAAAPRGW  26


 Score = 18.0 bits (35),  Expect(2) =  5154
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -1

Query  9025  PPRPRLPG  9002
             PPRP  PG
Sbjct  126   PPRP--PG  131


 Score = 17.2 bits (33),  Expect(2) =  5154
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -3

Query  9047  EGSPLPSPAQATP  9009
             E SP P P  A P
Sbjct  101   EASPEPGPGPAAP  113


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 10/27 (37%)
 Frame = +2

Query  8240  EGTDRVIEV----------VQGACRAI  8290
             +G DRV E            Q AC  I
Sbjct  231   DGPDRVLELFDPPKSSRPKLQAACSSI  257


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8775  ACSTIQ  8758
             ACS IQ
Sbjct  253   ACSSIQ  258


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  444  ASRELER----FA  470
            A REL R    FA
Sbjct  37   AARELARQYWLFA  49


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5411  SIQEV  5425
             SIQEV
Sbjct  256   SIQEV  260


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1266  QEVKNWMTE  1292
             Q+   WM E
Sbjct  293   QQLNSWMAE  301


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7636  NLFQRF  7619
             +LFQR+
Sbjct  69    DLFQRY  74


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4210  PKSRSS  4227
             PK RSS
Sbjct  116   PKARSS  121


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6792  VLFHFAL  6772
             VLF F L
Sbjct  475   VLFPFSL  481


 Score = 17.6 bits (34),  Expect(2) = 13853
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7198  PHISSS  7181
             PH SSS
Sbjct  499   PHLSSS  504


 Score = 15.5 bits (29),  Expect(2) = 13853
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7290  CTTLLF  7273
             C T LF
Sbjct  472   CNTVLF  477


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8993  WGLSRE  9010
             W L RE
Sbjct  185   WSLARE  190


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +2

Query  41   W-LTREP  58
            W L REP
Sbjct  185  WSLAREP  191


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +3

Query  9126  W-LTREP  9143
             W L REP
Sbjct  185   WSLAREP  191


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1733  PRPEAL  1716
             P PEAL
Sbjct  191   PPPEAL  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7501  LELLDAP  7481
             LEL D P
Sbjct  237   LELFDPP  243


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2357  WEVQLGIPH  2383
             W  +LG PH
Sbjct  492   WGSELGLPH  500


 Score = 15.9 bits (30),  Expect(2) = 28758
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  8316  RAWKGFC  8336
             R W  FC
Sbjct  24    RGWSEFC  30


 Score = 15.5 bits (29),  Expect(2) = 28758
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8436  AASRDL  8453
             AA R+L
Sbjct  36    AAAREL  41


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7558  PNPQEL  7541
             P P+EL
Sbjct  530   PSPEEL  535


 Score = 15.5 bits (29),  Expect(2) = 34253
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7183  RRRYEGQL  7206
             RRR  G+L
Sbjct  147   RRRSAGEL  154


 Score = 15.5 bits (29),  Expect(2) = 34253
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7321  FVPWVL  7338
             F PW L
Sbjct  182   FLPWSL  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3976  FRRKS  3990
             FRR S
Sbjct  146   FRRRS  150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3332  QESRW  3318
             QE RW
Sbjct  258   QEVRW  262


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6579  TSSSAR  6562
             TSSS R
Sbjct  327   TSSSPR  332


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7912  IIVSDPP  7932
             ++VS PP
Sbjct  463   VVVSQPP  469


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218  PEEL  229
            PEEL
Sbjct  532  PEEL  535


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 3/5 (60%), Gaps = 0/5 (0%)
 Frame = -1

Query  4045  WNNFC  4031
             W  FC
Sbjct  26    WSEFC  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP  PP P
Sbjct  125   APPRPPGP  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1591  SFPHF  1577
             SF HF
Sbjct  134   SFQHF  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5499  SLRH  5510
             SLRH
Sbjct  141   SLRH  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4150  RSTGEIAA  4127
             RS GE  A
Sbjct  149   RSAGELPA  156


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  328  GERWVRER  351
            G RW R R
Sbjct  214  GARWQRGR  221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6873  SPPE  6862
             SPPE
Sbjct  520   SPPE  523


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  347  SRTHL  333
            SR HL
Sbjct  561  SRSHL  565


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4663  FTKLFH  4646
             FT LF+
Sbjct  67    FTDLFQ  72


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  996   GPIAPG  1013
             GP APG
Sbjct  109   GPAAPG  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  484  RPGL  473
            RPGL
Sbjct  175  RPGL  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6970  PSTIKPST  6947
             PS   PST
Sbjct  320   PSALEPST  327


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8982  GLSAGDFPGR  9011
             GLS    PGR
Sbjct  509   GLSPEGLPGR  518


>pdb|2ZCH|P  Chain P, Crystal Structure Of Human Prostate Specific Antigen 
Complexed With An Activating Antibody
 pdb|2ZCK|P  Chain P, Crystal Structure Of A Ternary Complex Between Psa, 
A Substrat-Acyl Intermediate And An Activating Antibody
 pdb|2ZCL|P  Chain P, Crystal Structure Of Human Prostate Specific Antigen 
Complexed With An Activating Antibody
Length=237


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 9/20 (45%)
 Frame = -2

Query  8844  QGVTSW----CSL-----LY  8812
             QG+TSW    C L     LY
Sbjct  200   QGITSWGSEPCALPERPSLY  219


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7462  MLLRLNSP  7439
             MLLRL  P
Sbjct  98    MLLRLSEP  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1639  PKKLAC  1622
             PKKL C
Sbjct  144   PKKLQC  149


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4588  IIPNDLC  4568
             +I ND C
Sbjct  154   VISNDVC  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5347  ILLCRH  5330
             ILL RH
Sbjct  49    ILLGRH  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3194  QLTEAV  3211
             +LT+AV
Sbjct  107   ELTDAV  112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = +3

Query  7584  PLLCLGMLVGVINLW  7628
             PL C G L G+   W
Sbjct  192   PLVCNGVLQGITS-W  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2162  QWPLT  2176
             QW LT
Sbjct  34    QWVLT  38


>ref|NP_660186.1|  dual specificity mitogen-activated protein kinase kinase 7 [Homo 
sapiens]
Length=419

 GENE ID: 5609 MAP2K7 | mitogen-activated protein kinase kinase 7 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +2

Query  6218  EKGEIKNCSFNIS  6256
             E G+IK C F IS
Sbjct  253   ERGQIKLCDFGIS  265


 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +1

Query  5098  RID---GTSPRRPRAT  5136
             RID     SP RPR T
Sbjct  27    RIDLNLDISPQRPRPT  42


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = -2

Query  2499  ILG-M----VNAVYFLK  2464
             ILG M    V A Y+LK
Sbjct  218   ILGKMTVAIVKALYYLK  234


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8011  ISERILG  8031
             I ERILG
Sbjct  214   IPERILG  220


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5238  ISMKLMG  5258
             I M LMG
Sbjct  194   IAMELMG  200


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7002  LPSVLFDP  6979
             LPS LF P
Sbjct  77    LPSTLFTP  84


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  972  PILQLP  955
            P LQLP
Sbjct  41   PTLQLP  46


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = -2

Query  4398  MSVAIMSTILSPALY  4354
             M VAI       ALY
Sbjct  222   MTVAIVK-----ALY  231


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8965  IELATRDFP  8991
             +ELAT  FP
Sbjct  313   VELATGQFP  321


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6405  QFPY  6416
             QFPY
Sbjct  319   QFPY  322


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  2759  QKEPPFL--WMGY  2791
             Q EPP L   MG+
Sbjct  337   QEEPPLLPGHMGF  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  9029  SPAQATPP  9006
             SP + TPP
Sbjct  61    SPQHPTPP  68


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4988  FTPR  4977
             FTPR
Sbjct  82    FTPR  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = -1

Query  1180  MLVGLYILTILFNPR  1136
             ML GL     LF PR
Sbjct  74    ML-GL--PSTLFTPR  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1500  IVKCF  1514
             IV CF
Sbjct  179   IVQCF  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  193  QGPESER  213
            QGP  ER
Sbjct  211  QGPIPER  217


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5998  HRPQPT  6015
             +RP PT
Sbjct  37    QRPRPT  42


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5110  TSPRRPR  5130
             T P RPR
Sbjct  66    TPPARPR  72


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6512  YIVLC  6498
             YIV C
Sbjct  178   YIVQC  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5447  IAIVK  5461
             +AIVK
Sbjct  224   VAIVK  228


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8735  RGQI  8746
             RGQI
Sbjct  254   RGQI  257


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4494  FAGPFQS  4474
             F G FQS
Sbjct  349   FSGDFQS  355


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6961  IKPSTI  6944
             +KPS I
Sbjct  244   VKPSNI  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4195  SKFLLDSR  4172
             S  LLD R
Sbjct  247   SNILLDER  254


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1950  EVLSK  1964
             EVL K
Sbjct  330   EVLTK  334


>ref|NP_149053.1|  caytaxin [Homo sapiens]
Length=371

 GENE ID: 85300 ATCAY | ataxia, cerebellar, Cayman type [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 24.0 bits (49),  Expect =   225
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 6/22 (27%)
 Frame = +2

Query  2621  PDIVIYQY-MDDL--YVGSDLE  2677
             PD   Y+Y M++L  YV S LE
Sbjct  205   PD---YHYIMENLFLYVISSLE  223


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2931  YVNSLEE  2951
             YV SLE+
Sbjct  298   YVHSLED  304


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  9022  PRPRLPG  9002
             PR R+PG
Sbjct  240   PRRRMPG  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6461  YYYILE  6444
             Y YI+E
Sbjct  207   YHYIME  212


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2812  PFIRMEFI  2789
             PFI   FI
Sbjct  286   PFISVKFI  293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = +3

Query  861  SEGA--------TPQDLN  890
            SEG         TP DL+
Sbjct  75   SEGSLLSDDFLDTPDDLD  92


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  6094  YILMHLFYHVI  6062
             YI+  LF  VI
Sbjct  209   YIMENLFLYVI  219


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1881  APVSNR  1864
             APV NR
Sbjct  353   APVENR  358


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  2353  LLGSSIRNTTS  2385
             LLGS + +T S
Sbjct  36    LLGSPVEDTSS  46


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5425  DFLD  5414
             DFLD
Sbjct  83    DFLD  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2366  ELPRSL  2349
             +LPR L
Sbjct  23    DLPRPL  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7492  LDAPD  7478
             LD PD
Sbjct  85    LDTPD  89


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5584  IEKLDESD  5561
             IE  DE D
Sbjct  98    IETPDETD  105


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3038  HGVYY  3052
             HG YY
Sbjct  180   HGGYY  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3468  LLIEED  3485
             LL+ ED
Sbjct  224   LLVAED  229


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4424  ITKIQ  4438
             I KIQ
Sbjct  293   INKIQ  297


>gb|AAG00910.2|  recombinant IgG2 heavy chain [Homo sapiens]
Length=447


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   226
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  421   NVFSCSVM  428


 Score = 18.0 bits (35),  Expect(2) =   226
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  404   FFLY  407


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/18 (38%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -2

Query  4275  SLT--------CPIIFFN  4246
             SLT        C II+F+
Sbjct  85    SLTNEDSAVYYCSIIYFD  102


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 5/17 (29%)
 Frame = -3

Query  1154  YFI*SQDYPSFINFSYW  1104
             YF    DY  FI   YW
Sbjct  100   YF----DYADFI-MDYW  111


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  404   FFLYSK  409


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5388  YWLH  5377
             YWLH
Sbjct  32    YWLH  35


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -3

Query  1127  SFINFSYWDRWI  1092
             SF   SYW  WI
Sbjct  28    SFT--SYWLHWI  37


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  182   GLYSLSSV--VT  191


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2885  LNWASQIYPG  2914
             L W   IYPG
Sbjct  45    LEWIGGIYPG  54


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8315  QGLERI  8332
             QGLE I
Sbjct  43    QGLEWI  48


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2032  TYTC  2043
             TYTC
Sbjct  201   TYTC  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2249  PENPYNT  2269
             PEN Y T
Sbjct  387   PENNYKT  393


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  175   PAVLQSS  181


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = -2

Query  3213  CTASVNCFTS--LVW  3175
             C AS   FTS  L W
Sbjct  22    CKASGYSFTSYWLHW  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  283   EVHN  286


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  3235  YAFCGYFLH  3209
             Y F  Y LH
Sbjct  27    YSFTSYWLH  35


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  174   FPAVLQSS  181


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  278   YVDG  281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  346   PQVYTL  351


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  404   FFLYS  408


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  178   LQSSGL  183


>gb|AAG00912.1|  recombinant IgG4 heavy chain [Homo sapiens]
Length=389


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   232
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  363   NVFSCSVM  370


 Score = 18.0 bits (35),  Expect(2) =   232
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  346   FFLY  349


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/18 (38%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -2

Query  4275  SLT--------CPIIFFN  4246
             SLT        C II+F+
Sbjct  26    SLTNEDSAVYYCSIIYFD  43


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 5/17 (29%)
 Frame = -3

Query  1154  YFI*SQDYPSFINFSYW  1104
             YF    DY  FI   YW
Sbjct  41    YF----DYADFI-MDYW  52


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 13/33 (39%), Positives = 14/33 (42%), Gaps = 13/33 (39%)
 Frame = +3

Query  1005  APGQMREPRGSDIAGTTSTL---QEQIGWMTNN  1094
             A GQ REP          TL   QE+   MT N
Sbjct  281   AXGQPREPQ-------VYTLPPSQEE---MTKN  303


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  123   GLYSLSSV--VT  132


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  329   PENNYKTTPPV  339


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  134   PSSSLGTKTYTCNV  147


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2293  FFLY  2282
             FFLY
Sbjct  346   FFLY  349


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2032  TYTC  2043
             TYTC
Sbjct  142   TYTC  145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  119   LQXSGL  124


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  225   EVHN  228


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 14/28 (50%)
 Frame = -3

Query  8660  SSLGVN*PFQSPLFF*KVAKIYSCLVSH  8577
             SSLG               K Y C V H
Sbjct  136   SSLG--------------TKTYTCNVDH  149


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1779  PCLSAPASE  1753
             PC S PA E
Sbjct  167   PCPSCPAPE  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  220   YVDG  223


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  288   PQVYTL  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  346   FFLYS  350


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2362  FPEVL  2348
             FP VL
Sbjct  115   FPAVL  119


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  248   LTVLHQ  253


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7900  LPNSI  7886
             LP SI
Sbjct  270   LPSSI  274


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2897  LPNSI  2883
             LP SI
Sbjct  270   LPSSI  274


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  338   PVLDSDGSFF  347


>pdb|1ZA6|B  Chain B, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
 pdb|1ZA6|D  Chain D, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
 pdb|1ZA6|F  Chain F, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
 pdb|1ZA6|H  Chain H, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
Length=344


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   237
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  318   NVFSCSVM  325


 Score = 18.0 bits (35),  Expect(2) =   237
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  301   FFLY  304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  301   FFLYSK  306


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  176   GLYSLSSV--VT  185


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  284   PENNYKTTPPV  294


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8329  DFAIRWV  8349
             D AI WV
Sbjct  31    DHAIHWV  37


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  83    LSSLRS  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  169   PAVLQSS  175


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3222  VIFCTASVN  3196
             V FCT S N
Sbjct  93    VYFCTRSLN  101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  168   FPAVLQSS  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  187   PSSSLGTQTYICNV  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  188   SSSLGTQTY  196


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  243   PQVYTL  248


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  301   FFLYS  305


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6599  FTDNA  6613
             FTD A
Sbjct  29    FTDHA  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  172   LQSSGL  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1016  DERTKGK  1036
             +ER KGK
Sbjct  61    NERFKGK  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  293   PVLDSDGSFF  302


>emb|CAC20454.1|  immunoglobulin heavy chain constant region gamma 1 [Homo sapiens]
Length=330

 GENE ID: 3500 IGHG1 | immunoglobulin heavy constant gamma 1 (G1m marker)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   238
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  304   NVFSCSVM  311


 Score = 18.0 bits (35),  Expect(2) =   238
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  287   FFLY  290


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  287   FFLYSK  292


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  61    GLYSLSSV--VT  70


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  270   PENNYKTTPPV  280


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  178   QYNSTYRVVSVLTVLHQDW  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  54    PAVLQSS  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  166   EVHN  169


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  53    FPAVLQSS  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  72    PSSSLGTQTYICNV  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  73    SSSLGTQTY  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  157   KFNWYV  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  161   YVDG  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  229   PQVYTL  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  287   FFLYS  291


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  57    LQSSGL  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  189   LTVLHQ  194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  279   PVLDSDGSFF  288


>gb|AAG00909.1|  recombinant IgG1 heavy chain [Homo sapiens]
Length=329


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   239
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  303   NVFSCSVM  310


 Score = 18.0 bits (35),  Expect(2) =   239
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  286   FFLY  289


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  286   FFLYSK  291


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  60    GLYSLSSV--VT  69


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  269   PENNYKTTPPV  279


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  177   QYNSTYRVVSVLTVLHQDW  195


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  53    PAVLQSS  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  165   EVHN  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  52    FPAVLQSS  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  71    PSSSLGTQTYICNV  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2463  SSSKGTEKY  2437
             SSS GT+ Y
Sbjct  72    SSSLGTQTY  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  156   KFNWYV  161


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  160   YVDG  163


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  228   PQVYTL  233


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  286   FFLYS  290


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  56    LQSSGL  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  188   LTVLHQ  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  278   PVLDSDGSFF  287


>emb|CAC20457.1|  immunoglobulin heavy chain constant region gamma 4 [Homo sapiens]
Length=327

 GENE ID: 3503 IGHG4 | immunoglobulin heavy constant gamma 4 (G4m marker)
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   239
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  301   NVFSCSVM  308


 Score = 18.0 bits (35),  Expect(2) =   239
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  284   FFLY  287


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  61    GLYSLSSV--VT  70


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = -1

Query  6712  PWSSLDTDSFSCIV  6671
             P SSL T  + C V
Sbjct  72    PSSSLGTKTYTCNV  85


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2293  FFLY  2282
             FFLY
Sbjct  284   FFLY  287


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2032  TYTC  2043
             TYTC
Sbjct  80    TYTC  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  54    PAVLQSS  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  163   EVHN  166


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PE+ Y T  PV
Sbjct  267   PEDNYKTTPPV  277


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  53    FPAVLQSS  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 14/28 (50%)
 Frame = -3

Query  8660  SSLGVN*PFQSPLFF*KVAKIYSCLVSH  8577
             SSLG               K Y C V H
Sbjct  74    SSLG--------------TKTYTCNVDH  87


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1779  PCLSAPASE  1753
             PC S PA E
Sbjct  105   PCPSCPAPE  113


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  158   YVDG  161


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  226   PQVYTL  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  284   FFLYS  288


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  57    LQSSGL  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  186   LTVLHQ  191


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7900  LPNSI  7886
             LP SI
Sbjct  208   LPSSI  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2897  LPNSI  2883
             LP SI
Sbjct  208   LPSSI  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  276   PVLDSDGSFF  285


>emb|CAC20455.1|  immunoglobulin heavy chain constant region gamma 2 [Homo sapiens]
Length=326

 GENE ID: 3501 IGHG2 | immunoglobulin heavy constant gamma 2 (G2m marker)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   239
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  300   NVFSCSVM  307


 Score = 18.0 bits (35),  Expect(2) =   239
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  283   FFLY  286


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  283   FFLYSK  288


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = -1

Query  5116  GLFHLSSVSFVT  5081
             GL+ LSSV  VT
Sbjct  61    GLYSLSSV--VT  70


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2032  TYTC  2043
             TYTC
Sbjct  80    TYTC  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2249  PENPYNT  2269
             PEN Y T
Sbjct  266   PENNYKT  272


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2564  PAIFQSS  2584
             PA+ QSS
Sbjct  54    PAVLQSS  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  162   EVHN  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  2362  FPEVL-SS  2342
             FP VL SS
Sbjct  53    FPAVLQSS  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  157   YVDG  160


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  225   PQVYTL  230


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  283   FFLYS  287


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3551  LQDSGL  3568
             LQ SGL
Sbjct  57    LQSSGL  62


>pdb|2J6E|A  Chain A, Crystal Structure Of An Autoimmune Complex Between A 
Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc 
Epitope And Evidence For Affinity Maturation
 pdb|2J6E|B  Chain B, Crystal Structure Of An Autoimmune Complex Between A 
Human Igm Rheumatoid Factor And Igg1 Fc Reveals A Novel Fc 
Epitope And Evidence For Affinity Maturation
Length=232


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   253
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  206   NVFSCSVM  213


 Score = 18.0 bits (35),  Expect(2) =   253
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  189   FFLY  192


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  189   FFLYSK  194


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  172   PENNYKTTPPV  182


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  80    QYNSTYRVVSVLTVLHQDW  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  3389  EPIVGAETF--YVDG  3427
             EP V    F  YVDG
Sbjct  55    EPEV---KFNWYVDG  66


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  68    EVHN  71


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  59    KFNWYV  64


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  131   PQVYTL  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  189   FFLYS  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  91    LTVLHQ  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  181   PVLDSDGSFF  190


>ref|NP_612202.1|  NACHT, LRR and PYD domains-containing protein 6 [Homo sapiens]
Length=892

 GENE ID: 171389 NLRP6 | NLR family, pyrin domain containing 6 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   253
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +2

Query  833  RSDTHVFS-IIRR  868
            RSDTH F    RR
Sbjct  176  RSDTHTFNRLFRR  188


 Score = 17.6 bits (34),  Expect(2) =   253
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  715  RSAKIT  732
            RS KIT
Sbjct  139  RSVKIT  144


 Score = 22.7 bits (46),  Expect =   545
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 15/31 (48%)
 Frame = +2

Query  8045  DLRSLCLFSYHRL-RDLLLIVTRIVELLGRR  8134
             DLR LC     RL R+           LGRR
Sbjct  441   DLRNLC-----RLARE---------GVLGRR  457


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  8829  SLLHPVSL-HGMDDP  8870
             SLLHP  L + M DP
Sbjct  714   SLLHP--LFQAMTDP  726


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 7/24 (29%)
 Frame = -2

Query  3759  PALT--NLSTCSFPPIP----LCA  3706
             PALT  +LS C  P  P    LCA
Sbjct  812   PALTTLDLSGCQLPA-PMVTYLCA  834


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  8404  DELSQQQ  8424
             +ELSQ+Q
Sbjct  27    EELSQEQ  33


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3715  FVCW  3704
             FVCW
Sbjct  389   FVCW  392


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +2

Query  4808  RR-KRLAFGSGSL  4843
             RR  RL  GSG L
Sbjct  100   RRLQRLGLGSGTL  112


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  2722  QMLSQ---LLY  2699
             QML Q   LL+
Sbjct  266   QMLAQPQRLLF  276


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/23 (39%), Positives = 9/23 (39%), Gaps = 11/23 (47%)
 Frame = +2

Query  2933  CKL-----------LRGTKALTE  2968
             CKL           LR   ALTE
Sbjct  738   CKLPDAVCRDLSEALRAAPALTE  760


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  4878  VDPELADQLIHLY  4916
             VD  LA+QL + Y
Sbjct  62    VD--LAEQLAQFY  72


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +3

Query  1341  ALGPAATLEE  1370
             ALGPA   EE
Sbjct  162   ALGPA---EE  168


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5297  QQLLFI  5314
             Q LLFI
Sbjct  272   QRLLFI  277


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7890  ELGRD  7904
             ELGRD
Sbjct  403   ELGRD  407


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/23 (30%), Positives = 7/23 (30%), Gaps = 14/23 (60%)
 Frame = +3

Query  8394  ERMRRAEPAADRVGAASRDLEKH  8462
             ERMR              D E H
Sbjct  554   ERMR--------------DIERH  562


 Score = 17.6 bits (34),  Expect(2) = 11731
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 7/24 (29%)
 Frame = -1

Query  6781  FCSTNVTMCLSHISYFSYCNKCSP  6710
             FC  +V   LS      YC  C P
Sbjct  651   FCRMDVAV-LS------YCVRCCP  667


 Score = 15.5 bits (29),  Expect(2) = 11731
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6831  PNCSLNLL  6808
             PN  L LL
Sbjct  615   PNYPLELL  622


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8090  LLLIVTR  8110
             LLL+ TR
Sbjct  321   LLLVTTR  327


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1125  FYKF  1114
             FYKF
Sbjct  358   FYKF  361


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1887  SSAPVSN  1867
             SSAPV +
Sbjct  428   SSAPVAD  434


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  4557  QEEKQRSLG  4583
             QE K  SLG
Sbjct  683   QEKKKKSLG  691


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4880  YLCAI  4866
             YLCA+
Sbjct  831   YLCAV  835


 Score = 17.6 bits (34),  Expect(2) = 14064
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5403  ALEASRK  5423
             ALE  RK
Sbjct  77    ALEVARK  83


 Score = 15.1 bits (28),  Expect(2) = 14064
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5332  VDIAE  5346
             VD AE
Sbjct  62    VDLAE  66


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  477  PGLLET  494
            PG LET
Sbjct  486  PGVLET  491


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = -1

Query  2017  TYSFMSTDFYEYLIILSY  1964
             TY F    F E+L  LSY
Sbjct  494   TYQFIDQSFQEFLAALSY  511


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +3

Query  1692  PEPTAPPEE  1718
             PE  A PEE
Sbjct  154   PESAA-PEE  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7302  LFSLC  7288
             LF LC
Sbjct  381   LFALC  385


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8335  AIRWV  8349
             A RWV
Sbjct  575   ALRWV  579


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  2094  FPLALL-RLYQ*N*SQE  2141
             +PL LL  LY+    QE
Sbjct  617   YPLELLYCLYE---TQE  630


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2603  ALRFLSC  2583
             ALR  SC
Sbjct  671   ALRLISC  677


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3759  PALTNL  3742
             PALT L
Sbjct  756   PALTEL  761


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8075  HRLRD  8089
             H LRD
Sbjct  39    HKLRD  43


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7493  QLQARI  7510
             QL+AR+
Sbjct  128   QLHARV  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3814  LMFIL  3800
             L+FIL
Sbjct  274   LLFIL  278


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5019  LQYL  5030
             LQYL
Sbjct  801   LQYL  804


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -2

Query  3867  TGGRLKSLAIALQLL  3823
             TG RL   A+A +LL
Sbjct  11    TGPRL---AVARELL  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5299  TTAVY  5313
             TT VY
Sbjct  415   TTSVY  419


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2924  RQLCKLLR  2947
             R LC L R
Sbjct  443   RNLCRLAR  450


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  3635  ESELVNQIIEQ  3667
             E E   Q I+Q
Sbjct  490   ETEVTYQFIDQ  500


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2476  YCIYHT  2493
             YC Y T
Sbjct  623   YCLYET  628


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5452  YCKKCC  5469
             YC  CC
Sbjct  661   YCVRCC  666


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8860  IPCRL  8846
             I CRL
Sbjct  675   ISCRL  679


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4839  LPDP  4828
             LPDP
Sbjct  794   LPDP  797


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1895  LEEMS  1909
             LEE+S
Sbjct  26    LEELS  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2621  PDIVI  2635
             PD VI
Sbjct  869   PDLVI  873


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3056  PSKDLI  3073
             P K+LI
Sbjct  884   PPKELI  889


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1356  ATLEEM  1373
             A LEE+
Sbjct  24    AALEEL  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1798  EVKGYS  1781
             EV G+S
Sbjct  345   EVRGFS  350


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3086  SVFLL  3072
             SV+LL
Sbjct  417   SVYLL  421


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1471  REAILG  1488
             RE +LG
Sbjct  450   REGVLG  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  6887  LQFLGPLLR  6861
             LQ+L  +LR
Sbjct  801   LQYLVGMLR  809


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5019  LQYLALA  5039
             LQ L LA
Sbjct  843   LQTLSLA  849


>pdb|2GJ7|A  Chain A, Crystal Structure Of A Ge-GiFC COMPLEX
 pdb|2GJ7|B  Chain B, Crystal Structure Of A Ge-GiFC COMPLEX
Length=227


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   254
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  201   NVFSCSVM  208


 Score = 18.0 bits (35),  Expect(2) =   254
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  184   FFLY  187


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  184   FFLYSK  189


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  167   PENNYKTTPPV  177


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  75    QYNSTYRVVSVLTVLHQDW  93


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  63    EVHN  66


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  54    KFNWYV  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  58    YVDG  61


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  126   PQVYTL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  184   FFLYS  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  86    LTVLHQ  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  176   PVLDSDGSFF  185


>pdb|2QL1|A  Chain A, Structural Characterization Of A Mutated, Adcc-Enhanced 
Human Fc Fragment
Length=225


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   254
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  199   NVFSCSVM  206


 Score = 18.0 bits (35),  Expect(2) =   254
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  182   FFLY  185


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  182   FFLYSK  187


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  165   PENNYKTTPPV  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  73    QYNSTYRVVSVLTVLHQDW  91


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7498  ELLDAPD  7478
             ELL  PD
Sbjct  11    ELLGGPD  17


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  61    EVHN  64


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  52    KFNWYV  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  56    YVDG  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  124   PQVYTL  129


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  182   FFLYS  186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  84    LTVLHQ  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  174   PVLDSDGSFF  183


>pdb|1T83|A  Chain A, Crystal Structure Of A Human Type Iii Fc Gamma Receptor 
In Complex With An Fc Fragment Of Igg1 (Orthorhombic)
 pdb|1T83|B  Chain B, Crystal Structure Of A Human Type Iii Fc Gamma Receptor 
In Complex With An Fc Fragment Of Igg1 (Orthorhombic)
 pdb|1T89|A  Chain A, Crystal Structure Of A Human Type Iii Fc Gamma Receptor 
In Complex With An Fc Fragment Of Igg1 (Hexagonal)
 pdb|1T89|B  Chain B, Crystal Structure Of A Human Type Iii Fc Gamma Receptor 
In Complex With An Fc Fragment Of Igg1 (Hexagonal)
Length=224


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   255
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  198   NVFSCSVM  205


 Score = 18.0 bits (35),  Expect(2) =   255
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  181   FFLY  184


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  181   FFLYSK  186


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  164   PENNYKTTPPV  174


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  72    QYNSTYRVVSVLTVLHQDW  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  60    EVHN  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  51    KFNWYV  56


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  55    YVDG  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  123   PQVYTL  128


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  181   FFLYS  185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  83    LTVLHQ  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  173   PVLDSDGSFF  182


>pdb|2DTQ|A  Chain A, Crystal Structure Of The Fucosylated Fc Fragment From 
Human Immunoglobulin G1
 pdb|2DTQ|B  Chain B, Crystal Structure Of The Fucosylated Fc Fragment From 
Human Immunoglobulin G1
 pdb|2DTS|A  Chain A, Crystal Structure Of The Defucosylated Fc Fragment From 
Human Immunoglobulin G1
 pdb|2DTS|B  Chain B, Crystal Structure Of The Defucosylated Fc Fragment From 
Human Immunoglobulin G1
Length=223


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   255
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  197   NVFSCSVM  204


 Score = 18.0 bits (35),  Expect(2) =   255
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  180   FFLY  183


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  180   FFLYSK  185


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  163   PENNYKTTPPV  173


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  71    QYNSTYRVVSVLTVLHQDW  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  59    EVHN  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  50    KFNWYV  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  54    YVDG  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  122   PQVYTL  127


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  180   FFLYS  184


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  82    LTVLHQ  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  172   PVLDSDGSFF  181


>pdb|3DO3|A  Chain A, Human 1gg1 Fc Fragment, 2.5 Angstrom Structure
 pdb|3DO3|B  Chain B, Human 1gg1 Fc Fragment, 2.5 Angstrom Structure
Length=212


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   257
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  186   NVFSCSVM  193


 Score = 18.0 bits (35),  Expect(2) =   257
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  169   FFLY  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  169   FFLYSK  174


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  152   PENNYKTTPPV  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  60    QYNSTYRVVSVLTVLHQDW  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  48    EVHN  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  39    KFNWYV  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  43    YVDG  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  111   PQVYTL  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  169   FFLYS  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  71    LTVLHQ  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  161   PVLDSDGSFF  170


>pdb|3DNK|A  Chain A, Enzyme Deglycosylated Human Igg1 Fc Fragment
 pdb|3DNK|B  Chain B, Enzyme Deglycosylated Human Igg1 Fc Fragment
Length=212


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   257
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  186   NVFSCSVM  193


 Score = 18.0 bits (35),  Expect(2) =   257
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  169   FFLY  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  169   FFLYSK  174


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  152   PENNYKTTPPV  162


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  48    EVHN  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  39    KFNWYV  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  43    YVDG  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  111   PQVYTL  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  169   FFLYS  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/19 (31%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QY+          VL Q W
Sbjct  60    QYDSTYRVVSVLTVLHQDW  78


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  71    LTVLHQ  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  161   PVLDSDGSFF  170


>pdb|1OQO|A  Chain A, Complex Between G0 Version Of An Fc Bound To A Minimized 
Version Of Protein A Called Mini-Z
 pdb|1OQO|B  Chain B, Complex Between G0 Version Of An Fc Bound To A Minimized 
Version Of Protein A Called Mini-Z
 pdb|1OQX|A  Chain A, G-2 Glycovariant Of Human Igg Fc Bound To Minimized 
Version Of Protein A Called Z34c
 pdb|1OQX|B  Chain B, G-2 Glycovariant Of Human Igg Fc Bound To Minimized 
Version Of Protein A Called Z34c
Length=212


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   257
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  186   NVFSCSVM  193


 Score = 18.0 bits (35),  Expect(2) =   257
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  169   FFLY  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  169   FFLYSK  174


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  152   PENNYKTTPPV  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  60    QYNSTYRVVSVLTVLHQDW  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  48    EVHN  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  39    KFNWYV  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  43    YVDG  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  111   PQVYTL  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  169   FFLYS  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  71    LTVLHQ  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  161   PVLDSDGSFF  170


>pdb|3D6G|A  Chain A, Fc Fragment Of Igg1 (Herceptin) With Protein-A Mimetic 
Peptide Dendrimer Ligand.
 pdb|3D6G|B  Chain B, Fc Fragment Of Igg1 (Herceptin) With Protein-A Mimetic 
Peptide Dendrimer Ligand.
Length=210


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   257
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  186   NVFSCSVM  193


 Score = 18.0 bits (35),  Expect(2) =   257
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  169   FFLY  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  169   FFLYSK  174


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  152   PENNYKTTPPV  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  60    QYNSTYRVVSVLTVLHQDW  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  48    EVHN  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  39    KFNWYV  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  43    YVDG  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  111   PQVYTL  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  169   FFLYS  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  71    LTVLHQ  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  161   PVLDSDGSFF  170


>pdb|3FJT|A  Chain A, Crystal Structure Of A Human Fc Fragment Engineered 
For Extended Serum Half-Life
 pdb|3FJT|B  Chain B, Crystal Structure Of A Human Fc Fragment Engineered 
For Extended Serum Half-Life
Length=209


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   258
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  186   NVFSCSVM  193


 Score = 18.0 bits (35),  Expect(2) =   258
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  169   FFLY  172


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  169   FFLYSK  174


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  152   PENNYKTTPPV  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  60    QYNSTYRVVSVLTVLHQDW  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  48    EVHN  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  39    KFNWYV  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  43    YVDG  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  111   PQVYTL  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  169   FFLYS  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  71    LTVLHQ  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  161   PVLDSDGSFF  170


>pdb|2WAH|A  Chain A, Crystal Structure Of An Igg1 Fc Glycoform (Man9glcnac2)
 pdb|2WAH|B  Chain B, Crystal Structure Of An Igg1 Fc Glycoform (Man9glcnac2)
Length=209


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   258
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  185   NVFSCSVM  192


 Score = 18.0 bits (35),  Expect(2) =   258
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  168   FFLY  171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  168   FFLYSK  173


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  59    QYNSTYRVVSVLTVLHQDW  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  47    EVHN  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  38    KFNWYV  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  42    YVDG  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  110   PQVYTL  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  168   FFLYS  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  70    LTVLHQ  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  160   PVLDSDGSFF  169


>pdb|1L6X|A  Chain A, Fc Fragment Of Rituximab Bound To A Minimized Version 
Of The B-Domain From Protein A Called Z34c
Length=207


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   258
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  185   NVFSCSVM  192


 Score = 18.0 bits (35),  Expect(2) =   258
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  168   FFLY  171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  168   FFLYSK  173


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  151   PENNYKTTPPV  161


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  59    QYNSTYRVVSVLTVLHQDW  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  47    EVHN  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  38    KFNWYV  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  42    YVDG  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  110   PQVYTL  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  168   FFLYS  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  70    LTVLHQ  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  160   PVLDSDGSFF  169


>pdb|1DN2|A  Chain A, Fc Fragment Of Human Igg1 In Complex With An Engineered 
13 Residue Peptide Dcawhlgelvwct-Nh2
 pdb|1DN2|B  Chain B, Fc Fragment Of Human Igg1 In Complex With An Engineered 
13 Residue Peptide Dcawhlgelvwct-Nh2
Length=207


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   258
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6642  DVFSCTIM  6619
             +VFSC +M
Sbjct  185   NVFSCSVM  192


 Score = 18.0 bits (35),  Expect(2) =   258
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6686  FFLY  6675
             FFLY
Sbjct  168   FFLY  171


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2293  FFLYGK  2276
             FFLY K
Sbjct  168   FFLYSK  173


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  2249  PENPYNT--PV  2275
             PEN Y T  PV
Sbjct  151   PENNYKTTPPV  161


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 10/19 (52%)
 Frame = +2

Query  2528  QYN----------VLPQGW  2554
             QYN          VL Q W
Sbjct  59    QYNSTYRVVSVLTVLHQDW  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5960  EVHN  5971
             EVHN
Sbjct  47    EVHN  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5252  KFHRYV  5235
             KF  YV
Sbjct  38    KFNWYV  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3416  YVDG  3427
             YVDG
Sbjct  42    YVDG  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7051  PHVYNL  7034
             P+VY L
Sbjct  110   PQVYTL  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  168   FFLYS  172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3200  LIVLHH  3183
             L VLH+
Sbjct  70    LTVLHQ  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5893  PIIDCDPQFF  5864
             P+ D D  FF
Sbjct  160   PVLDSDGSFF  169


>ref|NP_848696.1|  minor histocompatibility antigen H13 isoform 3 [Homo sapiens]
Length=426

 GENE ID: 81502 HM13 | histocompatibility (minor) 13 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(3) =   266
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -1

Query  4651  FHVL-ILILSTCHTI  4610
             F VL IL LS  HTI
Sbjct  109   FFVLGILALS--HTI  121


 Score = 19.3 bits (38),  Expect(3) =   266
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  4821  SLFLLYADPNMLLLPI  4774
             SL LL     M LLPI
Sbjct  38    SL-LL-----MALLPI  47


 Score = 17.6 bits (34),  Expect(3) =   266
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4755  CVLLNLFL  4732
             C LL L+L
Sbjct  84    CTLLGLYL  91


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  7568  QSNPKSPGAV  7539
             +SNPK P AV
Sbjct  397   ESNPKDPAAV  406


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 14/49 (28%), Positives = 14/49 (28%), Gaps = 28/49 (57%)
 Frame = +1

Query  2437  IFFSSLR*RLQEVYCIYHT*YKQ*DTRD*ISVQCA----STGM-ERITS  2568
             IFF  LR                       SV CA       M E ITS
Sbjct  47    IFFGALR-----------------------SVRCARGKNASDMPETITS  72


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  424  LYFFFPPGLNRIFSH  380
            LY FF      IFS+
Sbjct  89   LYLFF-----KIFSQ  98


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4870  LYLFF  4856
             LYLFF
Sbjct  89    LYLFF  93


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2430  VMHIF  2444
             +MHIF
Sbjct  308   IMHIF  312


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +3

Query  7587  LLCLGM--LVGVINLW  7628
             L CLG+   VGV   W
Sbjct  163   LVCLGLSSIVGV---W  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 12/30 (40%)
 Frame = -1

Query  5113  LFHLSSVSFVT----LGKGGFIF-----FG  5051
             L HL  VS  T    LG G FI+     FG
Sbjct  199   LLHLNNVS--TGCILLG-GLFIYDVFWVFG  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  4758  GCVLL-NLF  4735
             GC+LL  LF
Sbjct  208   GCILLGGLF  216


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  3474  LVTYPA---FPNLVSL  3436
             LV  PA   FP LV L
Sbjct  322   LV--PACIGFPVLVAL  335


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6885  TISGSP  6868
             T+SGSP
Sbjct  364   TVSGSP  369


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7927  PPPNPEG  7947
             PP  PEG
Sbjct  25    PPSTPEG  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5899  RYPII  5885
             R+PII
Sbjct  77    RFPII  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 9/24 (37%)
 Frame = -1

Query  448  LAHTIC-F-NLYFF---FPPGLNR  392
            L HTI  F N  FF   FP   NR
Sbjct  117  LSHTISPFMNK-FFPASFP---NR  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  834  EVIPMFS  854
            EV  MFS
Sbjct  339  EVTEMFS  345


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5528  SGDSDEELI  5554
             SG+  EE I
Sbjct  146   SGENKEEII  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6096  IISSC  6082
             II SC
Sbjct  80    IIASC  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1570  PFFLGAL  1550
             P F GAL
Sbjct  46    PIFFGAL  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3320  WLANTL  3303
             W AN L
Sbjct  182   WIANNL  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9180  KHSRQALL  9157
             KH   ALL
Sbjct  313   KHAQPALL  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  95   KHSRQALL  72
            KH   ALL
Sbjct  313  KHAQPALL  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1155  LFYLIP  1138
             L YL+P
Sbjct  319   LLYLVP  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8439  ASRDLEK  8459
             AS  LEK
Sbjct  417   ASKGLEK  423


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4146  APVKL  4132
             AP+KL
Sbjct  238   APIKL  242


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1893  TVSSAPVS  1870
             TVS  P S
Sbjct  364   TVSGSPAS  371


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6619  HNSTAE  6636
             HN  AE
Sbjct  9     HNGSAE  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LL+ LL
Sbjct  40    LLMALL  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/20 (30%), Positives = 6/20 (30%), Gaps = 14/20 (70%)
 Frame = -1

Query  3934  LSMHGFSF*LTFITAGYYFF  3875
             LSM              YFF
Sbjct  105   LSM--------------YFF  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  4379  DIIATDIQTKEL  4414
             +II  +  TK+L
Sbjct  152   EIINYEFDTKDL  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6170  LKNDTNT  6190
             LK +T T
Sbjct  283   LKKNTHT  289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7981  TFFFYSF  7961
             T+F+ SF
Sbjct  289   TYFYTSF  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3820  IFLMFI  3803
             IF M I
Sbjct  306   IFIMHI  311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1422  LAEAMSQ  1442
             LA+ M Q
Sbjct  372   LADSMQQ  378


>ref|NP_848695.1|  minor histocompatibility antigen H13 isoform 2 [Homo sapiens]
Length=394

 GENE ID: 81502 HM13 | histocompatibility (minor) 13 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(3) =   272
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -1

Query  4651  FHVL-ILILSTCHTI  4610
             F VL IL LS  HTI
Sbjct  109   FFVLGILALS--HTI  121


 Score = 19.3 bits (38),  Expect(3) =   272
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  4821  SLFLLYADPNMLLLPI  4774
             SL LL     M LLPI
Sbjct  38    SL-LL-----MALLPI  47


 Score = 17.6 bits (34),  Expect(3) =   272
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4755  CVLLNLFL  4732
             C LL L+L
Sbjct  84    CTLLGLYL  91


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 14/49 (28%), Positives = 14/49 (28%), Gaps = 28/49 (57%)
 Frame = +1

Query  2437  IFFSSLR*RLQEVYCIYHT*YKQ*DTRD*ISVQCA----STGM-ERITS  2568
             IFF  LR                       SV CA       M E ITS
Sbjct  47    IFFGALR-----------------------SVRCARGKNASDMPETITS  72


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  424  LYFFFPPGLNRIFSH  380
            LY FF      IFS+
Sbjct  89   LYLFF-----KIFSQ  98


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4870  LYLFF  4856
             LYLFF
Sbjct  89    LYLFF  93


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2430  VMHIF  2444
             +MHIF
Sbjct  308   IMHIF  312


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +3

Query  7587  LLCLGM--LVGVINLW  7628
             L CLG+   VGV   W
Sbjct  163   LVCLGLSSIVGV---W  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 12/30 (40%)
 Frame = -1

Query  5113  LFHLSSVSFVT----LGKGGFIF-----FG  5051
             L HL  VS  T    LG G FI+     FG
Sbjct  199   LLHLNNVS--TGCILLG-GLFIYDVFWVFG  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  4758  GCVLL-NLF  4735
             GC+LL  LF
Sbjct  208   GCILLGGLF  216


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  3474  LVTYPA---FPNLVSL  3436
             LV  PA   FP LV L
Sbjct  322   LV--PACIGFPVLVAL  335


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6885  TISGSP  6868
             T+SGSP
Sbjct  364   TVSGSP  369


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7927  PPPNPEG  7947
             PP  PEG
Sbjct  25    PPSTPEG  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5899  RYPII  5885
             R+PII
Sbjct  77    RFPII  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 9/24 (37%)
 Frame = -1

Query  448  LAHTIC-F-NLYFF---FPPGLNR  392
            L HTI  F N  FF   FP   NR
Sbjct  117  LSHTISPFMNK-FFPASFP---NR  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  834  EVIPMFS  854
            EV  MFS
Sbjct  339  EVTEMFS  345


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5528  SGDSDEELI  5554
             SG+  EE I
Sbjct  146   SGENKEEII  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6096  IISSC  6082
             II SC
Sbjct  80    IIASC  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1570  PFFLGAL  1550
             P F GAL
Sbjct  46    PIFFGAL  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3320  WLANTL  3303
             W AN L
Sbjct  182   WIANNL  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9180  KHSRQALL  9157
             KH   ALL
Sbjct  313   KHAQPALL  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  95   KHSRQALL  72
            KH   ALL
Sbjct  313  KHAQPALL  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1155  LFYLIP  1138
             L YL+P
Sbjct  319   LLYLVP  324


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4146  APVKL  4132
             AP+KL
Sbjct  238   APIKL  242


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1893  TVSSAPVS  1870
             TVS  P S
Sbjct  364   TVSGSPAS  371


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6619  HNSTAE  6636
             HN  AE
Sbjct  9     HNGSAE  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LL+ LL
Sbjct  40    LLMALL  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/20 (30%), Positives = 6/20 (30%), Gaps = 14/20 (70%)
 Frame = -1

Query  3934  LSMHGFSF*LTFITAGYYFF  3875
             LSM              YFF
Sbjct  105   LSM--------------YFF  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  4379  DIIATDIQTKEL  4414
             +II  +  TK+L
Sbjct  152   EIINYEFDTKDL  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6170  LKNDTNT  6190
             LK +T T
Sbjct  283   LKKNTHT  289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7981  TFFFYSF  7961
             T+F+ SF
Sbjct  289   TYFYTSF  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3820  IFLMFI  3803
             IF M I
Sbjct  306   IFIMHI  311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1422  LAEAMSQ  1442
             LA+ M Q
Sbjct  372   LADSMQQ  378


>ref|NP_110416.1|  minor histocompatibility antigen H13 isoform 1 [Homo sapiens]
Length=377

 GENE ID: 81502 HM13 | histocompatibility (minor) 13 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(3) =   276
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -1

Query  4651  FHVL-ILILSTCHTI  4610
             F VL IL LS  HTI
Sbjct  109   FFVLGILALS--HTI  121


 Score = 19.3 bits (38),  Expect(3) =   276
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  4821  SLFLLYADPNMLLLPI  4774
             SL LL     M LLPI
Sbjct  38    SL-LL-----MALLPI  47


 Score = 17.6 bits (34),  Expect(3) =   276
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4755  CVLLNLFL  4732
             C LL L+L
Sbjct  84    CTLLGLYL  91


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  7568  QSNPKSPGAV  7539
             +SNPK P AV
Sbjct  348   ESNPKDPAAV  357


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 14/49 (28%), Positives = 14/49 (28%), Gaps = 28/49 (57%)
 Frame = +1

Query  2437  IFFSSLR*RLQEVYCIYHT*YKQ*DTRD*ISVQCA----STGM-ERITS  2568
             IFF  LR                       SV CA       M E ITS
Sbjct  47    IFFGALR-----------------------SVRCARGKNASDMPETITS  72


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  424  LYFFFPPGLNRIFSH  380
            LY FF      IFS+
Sbjct  89   LYLFF-----KIFSQ  98


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4870  LYLFF  4856
             LYLFF
Sbjct  89    LYLFF  93


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2430  VMHIF  2444
             +MHIF
Sbjct  308   IMHIF  312


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +3

Query  7587  LLCLGM--LVGVINLW  7628
             L CLG+   VGV   W
Sbjct  163   LVCLGLSSIVGV---W  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 12/30 (40%)
 Frame = -1

Query  5113  LFHLSSVSFVT----LGKGGFIF-----FG  5051
             L HL  VS  T    LG G FI+     FG
Sbjct  199   LLHLNNVS--TGCILLG-GLFIYDVFWVFG  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  4758  GCVLL-NLF  4735
             GC+LL  LF
Sbjct  208   GCILLGGLF  216


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -2

Query  3474  LVTYPA---FPNLVSL  3436
             LV  PA   FP LV L
Sbjct  322   LV--PACIGFPVLVAL  335


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7927  PPPNPEG  7947
             PP  PEG
Sbjct  25    PPSTPEG  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5899  RYPII  5885
             R+PII
Sbjct  77    RFPII  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 9/24 (37%)
 Frame = -1

Query  448  LAHTIC-F-NLYFF---FPPGLNR  392
            L HTI  F N  FF   FP   NR
Sbjct  117  LSHTISPFMNK-FFPASFP---NR  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  834  EVIPMFS  854
            EV  MFS
Sbjct  339  EVTEMFS  345


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5528  SGDSDEELI  5554
             SG+  EE I
Sbjct  146   SGENKEEII  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6096  IISSC  6082
             II SC
Sbjct  80    IIASC  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1570  PFFLGAL  1550
             P F GAL
Sbjct  46    PIFFGAL  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3320  WLANTL  3303
             W AN L
Sbjct  182   WIANNL  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  9180  KHSRQALL  9157
             KH   ALL
Sbjct  313   KHAQPALL  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  95   KHSRQALL  72
            KH   ALL
Sbjct  313  KHAQPALL  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1155  LFYLIP  1138
             L YL+P
Sbjct  319   LLYLVP  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8439  ASRDLEK  8459
             AS  LEK
Sbjct  368   ASKGLEK  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4146  APVKL  4132
             AP+KL
Sbjct  238   APIKL  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6619  HNSTAE  6636
             HN  AE
Sbjct  9     HNGSAE  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LL+ LL
Sbjct  40    LLMALL  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/20 (30%), Positives = 6/20 (30%), Gaps = 14/20 (70%)
 Frame = -1

Query  3934  LSMHGFSF*LTFITAGYYFF  3875
             LSM              YFF
Sbjct  105   LSM--------------YFF  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  4379  DIIATDIQTKEL  4414
             +II  +  TK+L
Sbjct  152   EIINYEFDTKDL  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6170  LKNDTNT  6190
             LK +T T
Sbjct  283   LKKNTHT  289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7981  TFFFYSF  7961
             T+F+ SF
Sbjct  289   TYFYTSF  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3820  IFLMFI  3803
             IF M I
Sbjct  306   IFIMHI  311


>gb|AAY33429.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect(2) =   287
 Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 9/28 (32%)
 Frame = +2

Query  7007  TITLPCRIKQIINMW-------QKVGKA  7069
             TIT  CR  QI   W       QK GKA
Sbjct  20    TIT--CRASQILGHWLPLSWYQQKPGKA  45


 Score = 18.0 bits (35),  Expect(2) =   287
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  96    YPLTFG  101


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +3

Query  504  CR--QILGQ  524
            CR  QILG+
Sbjct  23   CRASQILGH  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +3

Query  1026  PR------GSDIAGTTSTLQ  1067
             PR      GSD   T S LQ
Sbjct  62    PRFSGSGSGSDFTLTISSLQ  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 13/27 (48%)
 Frame = -2

Query  8190  SS*LQ-------YCRRFHQYLRASHPL  8131
             SS LQ       YC  +H+Y     PL
Sbjct  78    SS-LQPDDFATYYCLQYHEY-----PL  98


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  777  SPRTLNAWV  803
            SP TL A V
Sbjct  7    SPSTLSASV  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4127  GSNFT  4141
             GS+FT
Sbjct  70    GSDFT  74


>gb|ACN63282.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=121


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  9049  DPAYKQLLF  9075
             DPA  QLLF
Sbjct  101   DPAWRQLLF  109


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = +1

Query  4972  LALGVNIKQD  5001
             LA   NIKQD
Sbjct  50    LA---NIKQD  56


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  57    GSEIYYVD  64


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 11/30 (36%)
 Frame = +3

Query  9081  YWVSLVR--PDLSLGALWLTREPTA*ASIK  9164
             YW S VR  P   L   WL       A IK
Sbjct  34    YWMSWVRQAPGKGLE--WL-------ANIK  54


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7625  EIYY  7614
             EIYY
Sbjct  59    EIYY  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4166  WWAGIKQE  4189
             W A IKQ+
Sbjct  49    WLANIKQD  56


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  35    WMSWVRQ  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  71    TISRDNTKN  79


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3780  KNSTFL  3763
             KNS FL
Sbjct  78    KNSVFL  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6848  LLFY  6837
             LLFY
Sbjct  107   LLFY  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  51   ANIKQD  56


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4529  QDNSDI  4546
             QD S+I
Sbjct  55    QDGSEI  60


>gb|ACN63252.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=119


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8854  MGWMT  8868
             MGWMT
Sbjct  50    MGWMT  54


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1077  GWMT  1088
             GWMT
Sbjct  51    GWMT  54


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4024  ISTGYM  4007
             I T YM
Sbjct  78    INTAYM  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  85    LSSLRS  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  7865  FAVLSIVNRVRQ  7900
             F  L I N VRQ
Sbjct  31    FTSLDI-NWVRQ  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  295  YAKNF  309
            YA NF
Sbjct  62   YAQNF  66


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  694  LTQDTAI  714
            +T DT I
Sbjct  72   MTRDTSI  78


>gb|ACN63249.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=119


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8854  MGWMT  8868
             MGWMT
Sbjct  50    MGWMT  54


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1077  GWMT  1088
             GWMT
Sbjct  51    GWMT  54


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4024  ISTGYM  4007
             I T YM
Sbjct  78    INTAYM  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  85    LSSLRS  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  7865  FAVLSIVNRVRQ  7900
             F  L I N VRQ
Sbjct  31    FTSLDI-NWVRQ  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  295  YAKNF  309
            YA NF
Sbjct  62   YAQNF  66


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  694  LTQDTAI  714
            +T DT I
Sbjct  72   MTRDTSI  78


>gb|ACN63245.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=119


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8854  MGWMT  8868
             MGWMT
Sbjct  50    MGWMT  54


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1077  GWMT  1088
             GWMT
Sbjct  51    GWMT  54


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4024  ISTGYM  4007
             I T YM
Sbjct  78    INTAYM  83


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  85    LSSLRS  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  7865  FAVLSIVNRVRQ  7900
             F  L I N VRQ
Sbjct  31    FTSLDI-NWVRQ  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  295  YAKNF  309
            YA NF
Sbjct  62   YAQNF  66


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  694  LTQDTAI  714
            +T DT I
Sbjct  72   MTRDTSI  78


>pdb|3GSN|B  Chain B, Crystal Structure Of The Public Ra14 Tcr In Complex 
With The Hcmv Dominant NlvHLA-A2 Epitope
Length=243


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  112  VVEDLNKVFPPEV  124


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2733  PHLN--RCCLSS  2704
             P LN  R CLSS
Sbjct  180   PALNDSRYCLSS  191


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  164   EVHSG------VSTDPQP  175


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  216   LSENDEWT  223


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  112   VVEDLNK  118


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  130   SEAEIS  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3251  TPKF  3262
             TPKF
Sbjct  6     TPKF  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8873  LRVIH  8859
             LR IH
Sbjct  42    LRLIH  46


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4883  VYLCA  4869
             VY CA
Sbjct  87    VYFCA  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4062  SCPVSAGI  4039
             S PV  GI
Sbjct  92    SSPVTGGI  99


>pdb|3EZR|A  Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active 
Site
 pdb|3EZV|A  Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active 
Site
Length=300


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 14/34 (41%)
 Frame = -3

Query  2453  RE---LKNMHHPHPV-LL----------LIFSFL  2394
             RE   LK + HP  V LL          L+F FL
Sbjct  52    REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL  85


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = -1

Query  4504  PEELCW-----------SFPKW  4472
             P+E  W           SFPKW
Sbjct  224   PDEVVWPGVTSMPDYKPSFPKW  245


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7552  PQELLI  7535
             PQ LLI
Sbjct  132   PQNLLI  137


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2054  GRNLLTQ  2074
             GR LL Q
Sbjct  261   GRSLLSQ  267


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  143  PQTLLVSVE  169
            PQ LL+  E
Sbjct  132  PQNLLINTE  140


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  181  LLEIFHTD  158
            LL++ HT+
Sbjct  68   LLDVIHTE  75


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4112  IHTDN  4126
             IHT+N
Sbjct  72    IHTEN  76


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  8808  PLL-SYLAQL  8782
             PL  SYL QL
Sbjct  104   PLIKSYLFQL  113


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3794  YLFHL  3780
             YLF+L
Sbjct  109   YLFQL  113


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  780  VIWPDV  763
            V+WP V
Sbjct  227  VVWPGV  232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3050  YDPSK  3064
             YDP K
Sbjct  271   YDPNK  275


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +2

Query  3935  VDCSPGIWQLDC  3970
             VD    IW L C
Sbjct  186   VD----IWSLGC  193


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7807  VVYK  7818
             VVYK
Sbjct  19    VVYK  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = +2

Query  5414  IQEVSL----------KLL  5440
             I E+SL          KLL
Sbjct  51    IREISLLKELNHPNIVKLL  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5190  KLLDI  5204
             KLLD+
Sbjct  67    KLLDV  71


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  194  RDLKAKGKPEEL  229
            RDL    KP+ L
Sbjct  128  RDL----KPQNL  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  2719  MLSQLLYFCSMLPY  2678
             +LSQ      ML Y
Sbjct  264   LLSQ------MLHY  271


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2153  LGHPF  2139
             L HPF
Sbjct  283   LAHPF  287


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5888  YGVPV  5902
             +GVPV
Sbjct  154   FGVPV  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1192  LMSRML  1175
             L+S ML
Sbjct  264   LLSQML  269


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6254  STSIR  6268
             ST IR
Sbjct  48    STAIR  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8907  LAFHHVARELH  8939
             LAF H  R LH
Sbjct  117   LAFCHSHRVLH  127


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1018  IWPG  1007
             +WPG
Sbjct  228   VWPG  231


>pdb|3D5O|F  Chain F, Structural Recognition And Functional Activation Of 
Fcrr By Innate Pentraxins
Length=177


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  61    NDSGEYTCQT  70


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = -1

Query  2914  PWVN--------LTC  2894
             PW+N        LTC
Sbjct  12    PWINVLQEDSVTLTC  26


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  87    WLVLQ  91


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  45    LIPTHTQ  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7922  ETIM  7911
             ETIM
Sbjct  101   ETIM  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4143  VLRLGPP  4163
             VL L PP
Sbjct  6     VLKLEPP  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  69    QTGQTSLS  76


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  134   PTFSI  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V LTC+
Sbjct  22    VTLTCQ  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  61    NDSGE  65


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  78    PVHLTVL  84


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T+F S P
Sbjct  158   TLFSSKP  164


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8656  EDKISLIC  8679
             ED + L C
Sbjct  19    EDSVTLTC  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  109   SWKDKPL  115


>emb|CAR62778.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8287  SSTSSLYYFY  8258
             SS    YYFY
Sbjct  105   SSSANFYYFY  114


 Score = 23.5 bits (48),  Expect =   302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  815  FYYFY  801
            FYYFY
Sbjct  110  FYYFY  114


 Score = 18.9 bits (37),  Expect(2) =  4214
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6718  ICYNRKNR  6741
             I Y+R NR
Sbjct  52    ISYDRSNR  59


 Score = 17.6 bits (34),  Expect(2) =  4214
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  71    ISRDNSKNTL  80


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  70    TISRDNSKN  78


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 9/23 (39%)
 Frame = -1

Query  7882  YRKYSKNYS*TYQASYYHYE*FY  7814
             YR YS        A +Y Y  FY
Sbjct  101   YRPYSSS------ANFY-Y--FY  114


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4850  FYGDS  4836
             FY DS
Sbjct  60    FYADS  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4219  RSSRIY  4236
             RS R Y
Sbjct  56    RSNRFY  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  23    CAASGF  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  87    LRAE  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  2642  YMD  2650
             YMD
Sbjct  114   YMD  116


>pdb|2RD7|A  Chain A, Human Complement Membrane Attack Proteins Share A Common 
Fold With Bacterial Cytolysins
Length=367


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  9030  GEWRALR  9050
             GEWR LR
Sbjct  58    GEWRELR  64


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 10/29 (34%)
 Frame = +2

Query  6038  TENFNMWKND-MVEQ-MHEDIISLWDQSL  6118
             T  F M K+D M ++ M      L  QSL
Sbjct  173   TAHFKMRKDDIMLDEGM------L--QSL  193


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7849  YQASYY  7832
             Y ASYY
Sbjct  43    YDASYY  48


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  4848  EWRKKRY-ST  4874
             EWR  RY ST
Sbjct  59    EWRELRYDST  68


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  1853  LK---EALLDTG  1879
             LK   EAL DTG
Sbjct  88    LKYHFEALADTG  99


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  1883  DDTVLEE------MSLP  1915
             DD  L+E      M LP
Sbjct  181   DDIMLDEGMLQSLMELP  197


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4568  AKIIRDYG  4591
             AK I DYG
Sbjct  206   AKFINDYG  213


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5784  RNISTC  5801
             R+I TC
Sbjct  245   RDITTC  250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = +1

Query  2392  VKKEKISNS  2418
             VKK+K S+S
Sbjct  115   VKKDK-SDS  122


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3122  DKFDMSIGLAPA  3087
             D F   IG  PA
Sbjct  121   DSFGVTIGIGPA  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -1

Query  6430  RGTIMYGNW---LK  6398
             R TI Y  W   LK
Sbjct  313   RSTITYRSWGRSLK  326


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4179  IPAHQQAAL  4153
             IP  Q AAL
Sbjct  21    IPGSQKAAL  29


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7960  GPVGSP  7943
             GP GSP
Sbjct  130   GPAGSP  135


 Score = 15.5 bits (29),  Expect(2) = 41495
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6223  FLHYH  6209
             FL YH
Sbjct  87    FLKYH  91


 Score = 15.5 bits (29),  Expect(2) = 41495
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6196  TIGI  6185
             TIGI
Sbjct  126   TIGI  129


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8995  PAESPL  8978
             PA SPL
Sbjct  131   PAGSPL  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1114  KFIKD  1128
             KFI D
Sbjct  207   KFIND  211


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  478  GLTANRS  458
            GL  NRS
Sbjct  308  GLAQNRS  314


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6607  VREID  6593
             VR ID
Sbjct  8     VRAID  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/14 (35%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  3047  YYDPSKDLIAEIQK  3088
             +YD   DL   + K
Sbjct  104   FYDNANDLLSKVKK  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             L E+NK
Sbjct  151   LNELNK  156


>ref|NP_001129026.1|  band 4.1-like protein 2 isoform b [Homo sapiens]
 ref|NP_001129027.1|  band 4.1-like protein 2 isoform b [Homo sapiens]
Length=673

 GENE ID: 2037 EPB41L2 | erythrocyte membrane protein band 4.1-like 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 21/46 (45%)
 Frame = +2

Query  3425  GAANRETK------LGKAGYVTNRGRQKV----------VTLTDTT  3514
             GAA RETK      L KA        QKV          VTL D T
Sbjct  188   GAAKRETKEVQTNEL-KA----EKASQKVTKKTKTVQCKVTLLDGT  228


 Score = 22.7 bits (46),  Expect =   545
 Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 11/33 (33%)
 Frame = +3

Query  1245  LRAEQASQEV-KNWMTETLLVQNANPDCK-TIL  1337
             L AE ASQ V K   T T  VQ     CK T L
Sbjct  202   LKAEKASQKVTKK--TKT--VQ-----CKVTLL  225


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  3708  HTKELEE  3728
             +TKELEE
Sbjct  367   QTKELEE  373


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  5887  LWGTCVEGSNHH  5922
             LW  CVE   HH
Sbjct  484   LWKVCVE---HH  492


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  6678  QEKESVSRED  6707
             +EK SVS E+
Sbjct  145   EEKPSVSKEE  154


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -1

Query  8914  NARRLS----NLH  8888
             NA RLS    +LH
Sbjct  397   NAKRLSMYGVDLH  409


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 7/19 (36%)
 Frame = +2

Query  4394  DIQTKEL------QKQITK  4432
             ++QT EL      QK +TK
Sbjct  196   EVQTNELKAEKASQK-VTK  213


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8448  DLEKH  8462
             DLEKH
Sbjct  233   DLEKH  237


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1257  QASQEVKNWM  1286
             Q S E KNW+
Sbjct  264   QESPEQKNWL  273


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4400  QTKELQ  4417
             QTKEL+
Sbjct  367   QTKELE  372


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7170  SSDLEEE  7190
             SSD EEE
Sbjct  38    SSDPEEE  44


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1998  VDIKL  2012
             VDIKL
Sbjct  417   VDIKL  421


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8925  ARELHPE  8945
             ARE HP+
Sbjct  647   AREQHPD  653


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6002  LWVHRHVWPK  5973
             L + R  WPK
Sbjct  435   LRINRFAWPK  444


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = +1

Query  5782  GEISA----LV  5802
             GEISA    LV
Sbjct  572   GEISAYGPGLV  582


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5438  LVPIAIV  5458
             LV IA+V
Sbjct  581   LVSIAVV  587


 Score = 16.3 bits (31),  Expect(2) = 18851
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3364  EIMVPVRE  3387
             EI V V E
Sbjct  138   EIKVEVKE  145


 Score = 15.9 bits (30),  Expect(2) = 18851
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  145   EEKPS  149


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +1

Query  3949  RNMATRLYTFRRKSYP  3996
             RN+   L+TF  K YP
Sbjct  284   RNLP-WLFTFNVKFYP  298


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5563  QTHQAS  5580
             QT QAS
Sbjct  524   QTRQAS  529


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5071  LCLVLR  5088
             LCL LR
Sbjct  313   LCLQLR  318


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1955  FIKVR  1969
             +IKVR
Sbjct  456   YIKVR  460


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8455  SRSRDAAP  8432
             SRS D AP
Sbjct  548   SRSLDGAP  555


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +1

Query  4810  EKET----GI  4827
             EKET    GI
Sbjct  65    EKETSESRGI  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1425  AEAMSQ  1442
             AE M Q
Sbjct  129   AEEMAQ  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  4411  ITKTNYKNSKF  4443
             I K  YK S F
Sbjct  445   ILKISYKRSNF  455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7921  SDPPPNPE  7944
             S PPP  E
Sbjct  47    SQPPPAAE  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  206  AKGKPEEL  229
            AKG  EE+
Sbjct  125  AKGDAEEM  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6678  QEKESVS  6698
             +EK SVS
Sbjct  153   EEKPSVS  159


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  153   EEKPS  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8714  AELH  8725
             AELH
Sbjct  376   AELH  379


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6919  EKFPSTI  6899
             E F STI
Sbjct  465   EQFESTI  471


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7624  RFITP  7610
             RFI P
Sbjct  76    RFIPP  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4400  QTKELQ  4417
             +TKE Q
Sbjct  193   ETKEVQ  198


>pdb|2R0L|A  Chain A, Short Form Hgfa With Inhibitory Fab75
Length=248


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2816  VQPIVLPE  2839
             VQPI LPE
Sbjct  110   VQPICLPE  117


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1439  AHCFSQ  1422
             AHCFS+
Sbjct  39    AHCFSH  44


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3282  SFCMGSL  3262
             SFC GSL
Sbjct  23    SFCAGSL  29


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4917  YFDC  4928
             YFDC
Sbjct  179   YFDC  182


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  8467  APCFSRS--RD  8441
             A CFS S  RD
Sbjct  39    AHCFSHSPPRD  49


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5221  PWLRATY  5241
             PWL A Y
Sbjct  13    PWLAAIY  19


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7072  HCFS  7061
             HCFS
Sbjct  40    HCFS  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2053  NYVD  2042
             NYVD
Sbjct  229   NYVD  232


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 9/16 (56%)
 Frame = +1

Query  16   TRS---------EPGS  36
            TRS         EPGS
Sbjct  105  TRSQFVQPICLPEPGS  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 9/16 (56%)
 Frame = +2

Query  9101  TRS---------EPGS  9121
             TRS         EPGS
Sbjct  105   TRSQFVQPICLPEPGS  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7806  SQFV  7795
             SQFV
Sbjct  107   SQFV  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2451  GTEKY  2437
             G EKY
Sbjct  71    GIEKY  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3355  SLSEIMVP  3378
             SL E +VP
Sbjct  146   SLREALVP  153


>pdb|2QQH|A  Chain A, Structure Of C8a-Macpf Reveals Mechanism Of Membrane 
Attack In Complement Immune Defense
Length=334


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  9030  GEWRALR  9050
             GEWR LR
Sbjct  53    GEWRELR  59


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 10/29 (34%)
 Frame = +2

Query  6038  TENFNMWKND-MVEQ-MHEDIISLWDQSL  6118
             T  F M K+D M ++ M      L  QSL
Sbjct  168   TAHFKMRKDDIMLDEGM------L--QSL  188


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +3

Query  4848  EWRKKRY-STQVDPELADQLIHLYY  4919
             EWR  RY ST    E       LYY
Sbjct  54    EWRELRYDST---SE------RLYY  69


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7849  YQASYY  7832
             Y ASYY
Sbjct  38    YDASYY  43


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  1853  LK---EALLDTG  1879
             LK   EAL DTG
Sbjct  83    LKYHFEALADTG  94


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  1883  DDTVLEE------MSLP  1915
             DD  L+E      M LP
Sbjct  176   DDIMLDEGMLQSLMELP  192


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4568  AKIIRDYG  4591
             AK I DYG
Sbjct  201   AKFINDYG  208


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = +1

Query  2392  VKKEKISNS  2418
             VKK+K S+S
Sbjct  110   VKKDK-SDS  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3122  DKFDMSIGLAPA  3087
             D F   IG  PA
Sbjct  116   DSFGVTIGIGPA  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -1

Query  6430  RGTIMYGNW---LK  6398
             R TI Y  W   LK
Sbjct  277   RSTITYRSWGRSLK  290


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4179  IPAHQQAAL  4153
             IP  Q AAL
Sbjct  16    IPGSQKAAL  24


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7960  GPVGSP  7943
             GP GSP
Sbjct  125   GPAGSP  130


 Score = 15.5 bits (29),  Expect(2) = 43144
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6223  FLHYH  6209
             FL YH
Sbjct  82    FLKYH  86


 Score = 15.5 bits (29),  Expect(2) = 43144
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6196  TIGI  6185
             TIGI
Sbjct  121   TIGI  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8995  PAESPL  8978
             PA SPL
Sbjct  126   PAGSPL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1114  KFIKD  1128
             KFI D
Sbjct  202   KFIND  206


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  478  GLTANRS  458
            GL  NRS
Sbjct  272  GLAQNRS  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/14 (35%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  3047  YYDPSKDLIAEIQK  3088
             +YD   DL   + K
Sbjct  99    FYDNANDLLSKVKK  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             L E+NK
Sbjct  146   LNELNK  151


>pdb|2DHK|A  Chain A, Solution Structure Of The Ph Domain Of Tbc1 Domain Family 
Member 2 Protein From Human
Length=119


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3335  WEFVNTPP  3358
             WEF N PP
Sbjct  104   WEFHNSPP  111


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/23 (34%), Positives = 9/23 (39%), Gaps = 13/23 (56%)
 Frame = +3

Query  4638  IRTWKSLVKHHMYVSGKARGWFY  4706
             IR WKS            R WF+
Sbjct  23    IRGWKS------------R-WFF  32


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 11/22 (50%)
 Frame = +1

Query  8485  QQLPMLLVPG*KHKRRRRWVFQ  8550
             QQL M            RW F+
Sbjct  97    QQLQM-----------KRWEFH  107


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8174  YWSQEL  8191
             YW Q+L
Sbjct  94    YWLQQL  99


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  3491  VVTLTDTTNQ  3520
             V+TL   T Q
Sbjct  81    VITLKAATKQ  90


>gb|AAY40743.1|  SIGLEC-15 [Homo sapiens]
Length=328

 GENE ID: 284266 SIGLEC15 | sialic acid binding Ig-like lectin 15 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  927  WLLDVPPLCLAWCL  886
            WLL     CLAW L
Sbjct  6    WLLA----CLAWVL  15


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 17/40 (42%)
 Frame = -3

Query  9035  LPSPAQA-----T----PP----WKVPSGKSLVASSMSAV  8955
             LP PA+A     T    PP    W   SG  L   S+ AV
Sbjct  176   LPGPAHAFRALCTAEGEPPPALAW---SGQAL-GNSLAAV  211


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6083  ASVLPCHF  6060
             A VLPC F
Sbjct  59    AAVLPCTF  66


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7811  TTANLL  7794
             TT NLL
Sbjct  27    TTENLL  32


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5954  DTEVH  5968
             +TEVH
Sbjct  33    NTEVH  37


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7158  MSPRS  7172
             M PRS
Sbjct  316   MNPRS  320


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  9038  ASPQILHIS  9064
             A P I  IS
Sbjct  166   AAPRIVNIS  174


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3953  IWQLDC  3970
             IW L C
Sbjct  5     IWLLAC  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  1642  RSGLPTREGQG  1674
             RS  P REG+G
Sbjct  212   RS--P-REGHG  219


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  6217  HYHSPATTI  6191
             HY  P T I
Sbjct  72    HYDGPLTAI  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8083  ERLTL  8097
             ERL L
Sbjct  130   ERLAL  134


>gb|ABR91953.1|  T-cell receptor beta chain [Homo sapiens]
Length=63


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  44   VVEDLNKVFPPEV  56


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  4217  QG----VVESMNK  4243
             QG    VVE +NK
Sbjct  38    QGTRLTVVEDLNK  50


>gb|ABR91957.1|  T-cell receptor beta chain [Homo sapiens]
Length=103


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  4883  VYLCAISLF  4857
             VYLCA SL+
Sbjct  64    VYLCASSLY  72


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = +2

Query  5291  ILQQ---LLFIHFQN  5326
             IL Q   LL I+FQN
Sbjct  13    ILGQGPKLL-IQFQN  26


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 4/13 (30%)
 Frame = +2

Query  5171  LEELKNEAVRHFP  5209
             LE+LKN  V  FP
Sbjct  90    LEDLKN--V--FP  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  510  QILGQ  524
            QILGQ
Sbjct  12   QILGQ  16


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6235  KLLFQYQ  6255
             KLL Q+Q
Sbjct  19    KLLIQFQ  25


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2547  CGSTLY  2530
             C S LY
Sbjct  67    CASSLY  72


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  105  TLLEALK  85
            T LE LK
Sbjct  88   TVLEDLK  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  2725  QQMLSQ---LL  2702
             QQ L Q   LL
Sbjct  11    QQILGQGPKLL  21


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -3

Query  5120  LGLVPSILCQFRN  5082
             LG  P  L QF N
Sbjct  14    LGQGPKLLIQFQN  26


>gb|ABR37266.1|  T-cell receptor beta chain [Homo sapiens]
Length=55


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  40   VVEDLNKVFPPEV  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  40    VVEDLNK  46


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7075  CPSHQWT  7095
             C S +WT
Sbjct  20    CASSEWT  26


>gb|ABR37239.1|  T-cell receptor beta chain [Homo sapiens]
Length=63


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  45   VVEDLNKVFPPEV  57


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  4217  QG----VVESMNK  4243
             QG    VVE +NK
Sbjct  39    QGTRLTVVEDLNK  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  698  HRTQQ  712
            +RTQQ
Sbjct  12   QRTQQ  16


>gb|ABR37253.1|  T-cell receptor beta chain [Homo sapiens]
Length=105


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  87   VVEDLNKVFPPEV  99


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  87    VVEDLNK  93


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6526  PNSMCTL  6506
             PNS C L
Sbjct  44    PNSPCSL  50


>ref|NP_001177757.1|  low affinity immunoglobulin gamma Fc region receptor II-b isoform 
5 [Homo sapiens]
Length=303

 GENE ID: 2213 FCGR2B | Fc fragment of IgG, low affinity IIb, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  99    NDSGEYTCQT  108


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  507  YSLLM  493
            YSLLM
Sbjct  285  YSLLM  289


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  58    DSVTLTCR  65


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  125   WLVLQ  129


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  211   SSSP---MGIIVAVVT  223


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  223   TGIAVAAIVAAVVALIYC  240


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  83    LIPTHTQ  89


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  50    QWINVLQEDSVTLTC  64


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8421  ADRVGA  8438
             AD VGA
Sbjct  274   ADKVGA  279


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2937  NSLEEP  2954
             + LEEP
Sbjct  292   DALEEP  297


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  107   QTGQTSLS  114


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  223   TGIAVA  228


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  172   PNFSI  176


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4477  KWISAVP  4457
             K ISA P
Sbjct  243   KRISALP  249


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             D QNR+
Sbjct  298   DDQNRI  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  51    WINVLQEDSVTLTC  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  57    EDSVTLTCRG--TH  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  99    NDSGE  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  116   PVHLTVL  122


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  147   SWKDKPL  153


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  205   ITVQAPSSSPM  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2240  KIGPEN  2257
             K+G EN
Sbjct  276   KVGAEN  281


>ref|NP_001011552.2|  sodium/hydrogen exchanger 4 [Homo sapiens]
Length=798

 GENE ID: 389015 SLC9A4 | solute carrier family 9 (sodium/hydrogen exchanger),
member 4 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +1

Query  5761  DSGNESEGEISALVE  5805
             +SG ESEG  S LVE
Sbjct  759   ESGGESEGKAS-LVE  772


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -1

Query  4288  MFSLISYLSY  4259
             MFS   YLSY
Sbjct  308   MFS---YLSY  314


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  939  KETINEE  959
            KE INEE
Sbjct  486  KESINEE  492


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 6/19 (31%)
 Frame = -3

Query  5966  VPLYHML*HL----MHKIE  5922
             V LY ML       MHK E
Sbjct  240   VVLYNML--IAFTKMHKFE  256


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  5863  RKIVGHSLLWG  5895
             RK  GHSL WG
Sbjct  640   RK--GHSLPWG  648


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 11/30 (36%), Positives = 11/30 (36%), Gaps = 15/30 (50%)
 Frame = -3

Query  3746  IYLLVHFLQFLCVLVP--------MPDRPF  3681
             IY       FL  L P        MP RPF
Sbjct  129   IY-------FLYLLPPIVLEGGYFMPTRPF  151


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4906  FICITL  4923
             FIC TL
Sbjct  385   FICFTL  390


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2477  TAFTIP  2494
             TAF IP
Sbjct  567   TAFSIP  572


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4276  ISYLSY  4259
             I YLSY
Sbjct  656   IRYLSY  661


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4871  AISLFPPFY  4845
             AIS F  FY
Sbjct  398   AISVFALFY  406


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 10/24 (41%)
 Frame = +2

Query  4229  ESMNKELKKIIGQVR--DQAEHLK  4294
             ES N EL     ++R  D   HLK
Sbjct  487   ESINEEL-----HIRLMD---HLK  502


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8675  IKDILSS  8655
             I DIL S
Sbjct  592   IRDILTS  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8385  TVRERMR  8405
             T RE MR
Sbjct  634   TLRESMR  640


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  382  HRSNSP  365
            HRS SP
Sbjct  788  HRSHSP  793


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1092  YLSSIL  1075
             YLS IL
Sbjct  321   YLSGIL  326


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 13/41 (31%), Positives = 14/41 (34%), Gaps = 16/41 (39%)
 Frame = -2

Query  3264  LNLGVFPHITMLSVVIFCTASVNCFTSLVWAPLILAYFPVF  3142
             L L  FP   M     F TA            L+  YF VF
Sbjct  441   LPLSLFPRKKM-----FVTAT-----------LVVIYFTVF  465


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4936  SEKQSK  4919
             SEKQ K
Sbjct  620   SEKQAK  625


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1802  QVTLW  1816
             +VTLW
Sbjct  72    EVTLW  76


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6867  PEDCLKIIV  6841
             PE CL I V
Sbjct  98    PESCLLILV  106


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5294  LQQLLF  5311
             LQ LLF
Sbjct  194   LQNLLF  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4835  GSLHRMEEKEI  4867
             GSL+  E  EI
Sbjct  700   GSLQKQEAQEI  710


 Score = 17.6 bits (34),  Expect(2) = 14703
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4440  IFGFI  4454
             +FGFI
Sbjct  283   VFGFI  287


 Score = 15.1 bits (28),  Expect(2) = 14703
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4376  VDIIA  4390
             VDI A
Sbjct  261   VDILA  265


 Score = 16.3 bits (31),  Expect(2) = 17608
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3980  EGKVILVAV  4006
             EGK  LV V
Sbjct  765   EGKASLVEV  773


 Score = 15.9 bits (30),  Expect(2) = 17608
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3877  RNSSQ  3891
             RN SQ
Sbjct  729   RNTSQ  733


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  7820  LFIMIVGGLVG  7852
             L I+ VG LVG
Sbjct  102   LLIL-VGALVG  111


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4854  SILW  4843
             SILW
Sbjct  157   SILW  160


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  429  LIYIF  415
            LI+IF
Sbjct  365  LIFIF  369


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7170  SSDLEE  7187
             SSDL E
Sbjct  27    SSDLNE  32


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6396  PLSQFP  6413
             PLS FP
Sbjct  442   PLSLFP  447


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8167  PTVLESG  8187
             P VLE G
Sbjct  137   PIVLEGG  143


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 3/18 (16%)
 Frame = -2

Query  7029  ILHG--R-VIVSLPSVLF  6985
             IL G  R ++V L  VLF
Sbjct  263   ILAGCARFIVVGLGGVLF  280


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2901  RFTQ  2912
             RFTQ
Sbjct  293   RFTQ  296


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  4554  TT---FMSLLS  4531
             TT   FM +LS
Sbjct  349   TTIKYFMKMLS  359


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7038  ICFIL  7024
             ICF L
Sbjct  386   ICFTL  390


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4491  AGPFQSGFLLSL  4456
             AG F   FLL L
Sbjct  432   AGSFSLAFLLPL  443


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4126  IVSMY  4112
             IVS+Y
Sbjct  543   IVSLY  547


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3370  MVPVRERT  3393
             M  VR+RT
Sbjct  600   MYQVRQRT  607


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  199  PESE-RETRGA  228
            P+S  R+TR A
Sbjct  666  PQSAGRDTRAA  676


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3240  YGERLLN  3260
             +GE LLN
Sbjct  229   FGEALLN  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 2/12 (16%)
 Frame = -3

Query  1946  FPLSFL--VSIF  1917
             F L FL   S F
Sbjct  435   FSLAFLLPLSLF  446


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1758  KQEPIDKEL  1784
             K E I+ EL
Sbjct  485   KKESINEEL  493


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5136  CGPWS  5122
             CG WS
Sbjct  509   CGHWS  513


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5363  LSSNAYS  5343
             LSS A+S
Sbjct  564   LSSTAFS  570


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -2

Query  1932  FGFH----LPG  1912
              GFH    LPG
Sbjct  85    IGFHLYHRLPG  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -2

Query  4209  GL*GIPNSCL  4180
             GL   P SCL
Sbjct  95    GL--MPESCL  102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4865  SLFP  4854
             SLFP
Sbjct  444   SLFP  447


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8717  ELHTR  8731
             ELH R
Sbjct  492   ELHIR  496


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  417  KYKLK  431
            KY LK
Sbjct  612  KYNLK  616


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3507  TQQIRRLSY  3533
             T  IR LSY
Sbjct  653   TKNIRYLSY  661


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +3

Query  8562  VPLRPMTYKA---AVD  8600
             V LRP   K    AVD
Sbjct  743   VALRP---KPLFHAVD  755


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5960  LYHML  5946
             LYH L
Sbjct  89    LYHRL  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8948  LQELLTSSL  8974
             LQ LL  SL
Sbjct  194   LQNLLFGSL  202


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6472  IERLII  6455
             IE LI+
Sbjct  301   IEPLIV  306


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 10/20 (50%)
 Frame = +2

Query  3389  EP-IV---------GAETFY  3418
             EP IV          AET Y
Sbjct  302   EPLIVFMFSYLSYLAAETLY  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6742  SYFSY  6728
             SY SY
Sbjct  310   SYLSY  314


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2322  ISENLI  2339
             +SE LI
Sbjct  361   VSETLI  366


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7535  PLGIFP  7518
             PL  FP
Sbjct  442   PLSLFP  447


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5974  NIMYL  5960
             NI YL
Sbjct  655   NIRYL  659


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5307  SSCCRI  5290
             S C RI
Sbjct  694   SACSRI  699


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4711  ITMKAL  4728
             I MK L
Sbjct  711   IPMKSL  716


>ref|NP_963857.3|  low affinity immunoglobulin gamma Fc region receptor II-c precursor 
[Homo sapiens]
Length=323

 GENE ID: 9103 FCGR2C | Fc fragment of IgG, low affinity IIc, receptor for
(CD32) (gene/pseudogene) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  106   NDSGEYTCQT  115


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  65    DSVTLTCR  72


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  132   WLVLQ  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  218   SSSP---MGIIVAVVT  230


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  230   TGIAVAAIVAAVVALIYC  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  90    LIPTHTQ  96


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  57    QWINVLQEDSVTLTC  71


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  114   QTGQTSLS  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  230   TGIAVA  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  179   PNFSI  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3539  IYLAL  3553
             IYL L
Sbjct  309   IYLTL  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  58    WINVLQEDSVTLTC  71


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  64    EDSVTLTCRG--TH  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  106   NDSGE  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  123   PVHLTVL  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             P APP
Sbjct  44    PAAPP  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  154   SWKDKPL  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  212   ITVQAPSSSPM  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = +3

Query  1077  GWMTNNPPIPVGE---IY  1121
             G MT NP  P  +   IY
Sbjct  293   GYMTLNPRAPTDDDKNIY  310


>gb|EAW84063.1|  similar to Complement C3 precursor, isoform CRA_a [Homo sapiens]
Length=1343

 GENE ID: 388503 C3P1 | complement component 3 precursor pseudogene
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +2

Query  3986  KVILVAVHVASGYI  4027
             K +LVA H   GYI
Sbjct  126   KMVLVALH--AGYI  137


 Score = 22.7 bits (46),  Expect =   545
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 29/51 (56%)
 Frame = +3

Query  4113  YILTMAAISP-VLRLGPPVGGRES--------SR---------NL---EFP  4202
             YIL    + P VLR G P    ES        SR         NL   +FP
Sbjct  25    YIL----VTPRVLRVGSP----ESIHIQAHSDSRQPLTRTLKVNLTVWDFP  67


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  7890  LFTIESTA  7867
             L+TIE TA
Sbjct  1177  LYTIEATA  1184


 Score = 20.2 bits (40),  Expect(3) =  1860
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3585  VTMFTS  3568
             VTMF S
Sbjct  331   VTMFSS  336


 Score = 17.6 bits (34),  Expect(3) =  1860
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3554  AKLDKL  3537
             A LDKL
Sbjct  414   ANLDKL  419


 Score = 16.3 bits (31),  Expect(3) =  1860
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3576  FTSNPE  3559
             F SNP+
Sbjct  377   FISNPD  382


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2731  GTYHT  2745
             GTYHT
Sbjct  1042  GTYHT  1046


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5339  MSTPNS  5322
             M TPNS
Sbjct  905   MGTPNS  910


 Score = 17.6 bits (34),  Expect(2) =  6936
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1158  LLFYLIP  1138
             L FYL P
Sbjct  531   LAFYLLP  537


 Score = 16.3 bits (31),  Expect(2) =  6936
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1254  RLLEFY  1237
             R L FY
Sbjct  529   RILAFY  534


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 10/18 (55%)
 Frame = +3

Query  603  QRIEI----------KDT  626
            QR+EI          KDT
Sbjct  293  QRVEISEGLGHVSLQKDT  310


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  466  SQLIL  480
            SQLIL
Sbjct  76   SQLIL  80


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4975  ALGVNI  4992
             ALGV+I
Sbjct  254   ALGVDI  259


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5326  LGVDI  5340
             LGVDI
Sbjct  255   LGVDI  259


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 7/20 (35%)
 Frame = +1

Query  4678  FQGKLGDGFI------DITM  4719
             FQG  G+ FI      ++TM
Sbjct  315   FQGP-GEDFIGGSIFVNVTM  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6606  SVKLTDLITT  6577
             SVK  D ITT
Sbjct  766   SVKVPDSITT  775


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4795  QYVVI  4781
             QYV+I
Sbjct  107   QYVII  111


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4743  NLFLDE  4726
             +LFLD+
Sbjct  730   DLFLDD  735


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  7474  ELQQMLLR  7451
             E QQ LLR
Sbjct  977   EIQQ-LLR  983


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5351  AYSAMST  5331
             AYS M T
Sbjct  1067  AYSMMTT  1073


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3380  LEKEPIV  3400
             LEK P+V
Sbjct  1100  LEKGPVV  1106


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5955  SYALA  5941
             SYALA
Sbjct  1141  SYALA  1145


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4460  DSRNPL  4477
             DSR PL
Sbjct  48    DSRQPL  53


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  740  HYRV  729
            HYRV
Sbjct  153  HYRV  156


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2533  VLISNP  2516
             V ISNP
Sbjct  376   VFISNP  381


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4490  LVLSK  4476
             LVLSK
Sbjct  492   LVLSK  496


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +2

Query  4298  AVQMAVFIHNFKRK  4339
             AV  AV++ N K K
Sbjct  598   AVDKAVYVLNSKHK  611


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/21 (33%), Positives = 8/21 (38%), Gaps = 11/21 (52%)
 Frame = -3

Query  5939  LMHKIEW-----------WLL  5910
             LM+K E            WLL
Sbjct  1187  LMQKLELGRYNETHAIAKWLL  1207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  244   SPASRE  227
             SP SRE
Sbjct  1301  SPESRE  1306


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3453  PNLVSL  3436
             P LVSL
Sbjct  201   PELVSL  206


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  3963  SCHIPGLQS  3937
             SC IP  QS
Sbjct  283   SCRIP-IQS  290


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  682  SKQQLTQ  702
            SK+ LTQ
Sbjct  608  SKHKLTQ  614


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4812  ERDWH  4826
             ER WH
Sbjct  683   ERTWH  687


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3962  LDCTHL  3979
             LDC HL
Sbjct  699   LDCCHL  704


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2325  SENLIRE  2345
             SE L RE
Sbjct  705   SETLTRE  711


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  876  GWLLL  862
            GW LL
Sbjct  8    GWILL  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1235  EPVYI  1221
             EP YI
Sbjct  22    EPLYI  26


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +1

Query  8953  RTADIELATRDFPL  8994
             RT  + L   DFP+
Sbjct  55    RTLKVNLTVWDFPM  68


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/27 (25%), Positives = 9/27 (33%), Gaps = 17/27 (62%)
 Frame = -1

Query  8050  QIVPDKCQGsvh*sngsvsvslSTFFF  7970
             Q VP+K                 TFF+
Sbjct  240   QLVPNK-----------------TFFY  249


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5413  ASRALV  5396
             ASR LV
Sbjct  386   ASRVLV  391


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8658  RQDILDLW  8681
             R+D L LW
Sbjct  713   REDQLHLW  720


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  742   FPESW  746


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2634  SINTW  2648
             SI TW
Sbjct  772   SITTW  776


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3967  LYTFR  3981
             LY FR
Sbjct  825   LYNFR  829


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4316  ILPFVLL  4296
             I  FVLL
Sbjct  868   IVHFVLL  874


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5937  QMLKH  5951
             QML H
Sbjct  1033  QMLTH  1037


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3477  EEDKK  3491
             EE+KK
Sbjct  1323  EENKK  1327


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7825  HNDSR  7839
             H DSR
Sbjct  46    HSDSR  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4652  KFSKTP  4669
             KF  TP
Sbjct  358   KFTRTP  363


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1671  GNFLQ  1685
             GNFL+
Sbjct  451   GNFLH  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1388  LTCCH  1374
             L CCH
Sbjct  699   LDCCH  703


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  1769  DRQGTVSFNFPQ  1804
             DRQ  V   FP+
Sbjct  830   DRQAKVRVEFPH  841


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4394  DIQT  4405
             DIQT
Sbjct  1130  DIQT  1133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8348  THLIAK  8331
             TH IAK
Sbjct  1199  THAIAK  1204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3582  TMFTSNPES  3556
             TM+   PES
Sbjct  1296  TMYHKSPES  1304


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 9/20 (45%)
 Frame = -1

Query  4900  WSASSGSTCVLYLFFLHSME  4841
             W   SGS      F    ME
Sbjct  115   WAPTSGSS-----F----ME  125


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3819  ITVI  3830
             ITVI
Sbjct  180   ITVI  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 0/13 (0%)
 Frame = -2

Query  3774  STFLIPALTNLST  3736
             S F  P L  L T
Sbjct  196   SSFHLPELVSLGT  208


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  6965  TWSTEGS  6985
             TW  E S
Sbjct  208   TWTIEAS  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5180  LKNEA  5194
             LK+EA
Sbjct  250   LKDEA  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2866  TEVSGEIEL  2892
             TEV   I+L
Sbjct  463   TEVGSSIQL  471


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6627  TIMVL  6613
             TI+VL
Sbjct  490   TILVL  494


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/10 (40%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  5850  IINIPRSMVP  5821
             II++   M P
Sbjct  517   IIDVTSAMLP  526


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -2

Query  2493  GMV---NAVYFLKSSSKGTEK  2440
             G+V    AVY L S  K T+K
Sbjct  595   GLVAVDKAVYVLNSKHKLTQK  615


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2014  YSFMST  1997
             YS M T
Sbjct  1068  YSMMTT  1073


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  9035  VASPQILHI  9061
             V SP+  HI
Sbjct  35    VGSPESIHI  43


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4747  SELIL  4733
             S+LIL
Sbjct  76    SQLIL  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +2

Query  6188  TNSSSGRMIMEK  6223
             T  SS    MEK
Sbjct  118   TSGSS---FMEK  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7571  FQSNPK  7554
             +QS PK
Sbjct  215   YQSTPK  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4838  SLHRME  4855
             SL+R E
Sbjct  291   SLQRVE  296


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  214  PFRFQV  197
            PF F V
Sbjct  371  PFHFRV  376


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2123  LVQSQ  2109
             LV+SQ
Sbjct  390   LVHSQ  394


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  6783  HFALLML  6763
             HF  L L
Sbjct  488   HFTILVL  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4316  ILPFVLL  4296
             IL F LL
Sbjct  530   ILAFYLL  536


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8999  LSREA  9013
             L REA
Sbjct  708   LTREA  712


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4721  FIVMSIK  4701
             F+V S K
Sbjct  778   FVVVSLK  784


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4028  EAEV  4039
             EAEV
Sbjct  953   EAEV  956


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3055  VIIHSMY  3035
             VII S Y
Sbjct  999   VIILSRY  1005


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4625  RQDED  4639
             RQ ED
Sbjct  1092  RQAED  1096


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4587  MENRWQ  4604
             ME R Q
Sbjct  1336  METRFQ  1341


>gb|EAW84064.1|  similar to Complement C3 precursor, isoform CRA_b [Homo sapiens]
Length=1614

 GENE ID: 388503 C3P1 | complement component 3 precursor pseudogene
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +2

Query  3986  KVILVAVHVASGYI  4027
             K +LVA H   GYI
Sbjct  126   KMVLVALH--AGYI  137


 Score = 22.7 bits (46),  Expect =   545
 Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 29/51 (56%)
 Frame = +3

Query  4113  YILTMAAISP-VLRLGPPVGGRES--------SR---------NL---EFP  4202
             YIL    + P VLR G P    ES        SR         NL   +FP
Sbjct  25    YIL----VTPRVLRVGSP----ESIHIQAHSDSRQPLTRTLKVNLTVWDFP  67


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  7890  LFTIESTA  7867
             L+TIE TA
Sbjct  1177  LYTIEATA  1184


 Score = 20.2 bits (40),  Expect(3) =  1758
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3585  VTMFTS  3568
             VTMF S
Sbjct  331   VTMFSS  336


 Score = 17.6 bits (34),  Expect(3) =  1758
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3554  AKLDKL  3537
             A LDKL
Sbjct  414   ANLDKL  419


 Score = 16.3 bits (31),  Expect(3) =  1758
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3576  FTSNPE  3559
             F SNP+
Sbjct  377   FISNPD  382


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2731  GTYHT  2745
             GTYHT
Sbjct  1042  GTYHT  1046


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5339  MSTPNS  5322
             M TPNS
Sbjct  905   MGTPNS  910


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  3182  NDVKQLTEAVQ  3214
             +D KQLT  V+
Sbjct  1368  DDLKQLTSDVE  1378


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = +1

Query  7834  SRRLGRFKNSFCCTFY  7881
             SRR        C TFY
Sbjct  1437  SRR--------CSTFY  1444


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  531   PSLQTGSEELR  563
             PSLQ  S +LR
Sbjct  1470  PSLQKPSGQLR  1480


 Score = 17.6 bits (34),  Expect(2) =  6471
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1158  LLFYLIP  1138
             L FYL P
Sbjct  531   LAFYLLP  537


 Score = 16.3 bits (31),  Expect(2) =  6471
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1254  RLLEFY  1237
             R L FY
Sbjct  529   RILAFY  534


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 10/18 (55%)
 Frame = +3

Query  603  QRIEI----------KDT  626
            QR+EI          KDT
Sbjct  293  QRVEISEGLGHVSLQKDT  310


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  466  SQLIL  480
            SQLIL
Sbjct  76   SQLIL  80


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4975  ALGVNI  4992
             ALGV+I
Sbjct  254   ALGVDI  259


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5326  LGVDI  5340
             LGVDI
Sbjct  255   LGVDI  259


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/20 (40%), Positives = 11/20 (55%), Gaps = 7/20 (35%)
 Frame = +1

Query  4678  FQGKLGDGFI------DITM  4719
             FQG  G+ FI      ++TM
Sbjct  315   FQGP-GEDFIGGSIFVNVTM  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6606  SVKLTDLITT  6577
             SVK  D ITT
Sbjct  766   SVKVPDSITT  775


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3047  YYDPS  3061
             YY+PS
Sbjct  1433  YYEPS  1437


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2275  ICHKE  2289
             ICHK+
Sbjct  1456  ICHKD  1460


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4795  QYVVI  4781
             QYV+I
Sbjct  107   QYVII  111


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4743  NLFLDE  4726
             +LFLD+
Sbjct  730   DLFLDD  735


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  7474  ELQQMLLR  7451
             E QQ LLR
Sbjct  977   EIQQ-LLR  983


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5351  AYSAMST  5331
             AYS M T
Sbjct  1067  AYSMMTT  1073


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3380  LEKEPIV  3400
             LEK P+V
Sbjct  1100  LEKGPVV  1106


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5955  SYALA  5941
             SYALA
Sbjct  1141  SYALA  1145


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  7490  KQLQARILAVERY  7528
             KQL      VERY
Sbjct  1371  KQLTS---DVERY  1380


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4460  DSRNPL  4477
             DSR PL
Sbjct  48    DSRQPL  53


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  740  HYRV  729
            HYRV
Sbjct  153  HYRV  156


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2533  VLISNP  2516
             V ISNP
Sbjct  376   VFISNP  381


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4490  LVLSK  4476
             LVLSK
Sbjct  492   LVLSK  496


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +2

Query  4298  AVQMAVFIHNFKRK  4339
             AV  AV++ N K K
Sbjct  598   AVDKAVYVLNSKHK  611


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/21 (33%), Positives = 8/21 (38%), Gaps = 11/21 (52%)
 Frame = -3

Query  5939  LMHKIEW-----------WLL  5910
             LM+K E            WLL
Sbjct  1187  LMQKLELGRYNETHAIAKWLL  1207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  244   SPASRE  227
             SP SRE
Sbjct  1301  SPESRE  1306


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -2

Query  9015  HASLE-SPQR  8989
             H  LE S QR
Sbjct  1319  HSALEESSQR  1328


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3453  PNLVSL  3436
             P LVSL
Sbjct  201   PELVSL  206


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  3963  SCHIPGLQS  3937
             SC IP  QS
Sbjct  283   SCRIP-IQS  290


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  682  SKQQLTQ  702
            SK+ LTQ
Sbjct  608  SKHKLTQ  614


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4812  ERDWH  4826
             ER WH
Sbjct  683   ERTWH  687


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3962  LDCTHL  3979
             LDC HL
Sbjct  699   LDCCHL  704


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2325  SENLIRE  2345
             SE L RE
Sbjct  705   SETLTRE  711


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 18/38 (47%)
 Frame = -1

Query  5485  KLGNESNT---FYNSNWYK-----QF*ADFLDASRALV  5396
             KL  E NT   F            Q  A+FL A  ALV
Sbjct  1401  KLSHEKNTVLGF------RVHRMLQ--AEFLQA--ALV  1428


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  876  GWLLL  862
            GW LL
Sbjct  8    GWILL  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1235  EPVYI  1221
             EP YI
Sbjct  22    EPLYI  26


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +1

Query  8953  RTADIELATRDFPL  8994
             RT  + L   DFP+
Sbjct  55    RTLKVNLTVWDFPM  68


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/27 (25%), Positives = 9/27 (33%), Gaps = 17/27 (62%)
 Frame = -1

Query  8050  QIVPDKCQGsvh*sngsvsvslSTFFF  7970
             Q VP+K                 TFF+
Sbjct  240   QLVPNK-----------------TFFY  249


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5413  ASRALV  5396
             ASR LV
Sbjct  386   ASRVLV  391


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8658  RQDILDLW  8681
             R+D L LW
Sbjct  713   REDQLHLW  720


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  742   FPESW  746


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2634  SINTW  2648
             SI TW
Sbjct  772   SITTW  776


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3967  LYTFR  3981
             LY FR
Sbjct  825   LYNFR  829


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4316  ILPFVLL  4296
             I  FVLL
Sbjct  868   IVHFVLL  874


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5937  QMLKH  5951
             QML H
Sbjct  1033  QMLTH  1037


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5414  IQEVSL  5431
             I EVSL
Sbjct  1354  IMEVSL  1359


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5931  VHQML  5945
             VH ML
Sbjct  1414  VHRML  1418


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 8/18 (44%)
 Frame = -1

Query  5578  KLDESDCSDELFVAVSAS  5525
             KL ES       V VSAS
Sbjct  1500  KL-ES-------VEVSAS  1509


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7825  HNDSR  7839
             H DSR
Sbjct  46    HSDSR  50


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4652  KFSKTP  4669
             KF  TP
Sbjct  358   KFTRTP  363


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1671  GNFLQ  1685
             GNFL+
Sbjct  451   GNFLH  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1388  LTCCH  1374
             L CCH
Sbjct  699   LDCCH  703


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  1769  DRQGTVSFNFPQ  1804
             DRQ  V   FP+
Sbjct  830   DRQAKVRVEFPH  841


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4394  DIQT  4405
             DIQT
Sbjct  1130  DIQT  1133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8348  THLIAK  8331
             TH IAK
Sbjct  1199  THAIAK  1204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3582  TMFTSNPES  3556
             TM+   PES
Sbjct  1296  TMYHKSPES  1304


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2252  QAQFL  2238
             QA+FL
Sbjct  1419  QAEFL  1423


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 9/20 (45%)
 Frame = -1

Query  4900  WSASSGSTCVLYLFFLHSME  4841
             W   SGS      F    ME
Sbjct  115   WAPTSGSS-----F----ME  125


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3819  ITVI  3830
             ITVI
Sbjct  180   ITVI  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 0/13 (0%)
 Frame = -2

Query  3774  STFLIPALTNLST  3736
             S F  P L  L T
Sbjct  196   SSFHLPELVSLGT  208


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  6965  TWSTEGS  6985
             TW  E S
Sbjct  208   TWTIEAS  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5180  LKNEA  5194
             LK+EA
Sbjct  250   LKDEA  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2866  TEVSGEIEL  2892
             TEV   I+L
Sbjct  463   TEVGSSIQL  471


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6627  TIMVL  6613
             TI+VL
Sbjct  490   TILVL  494


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/10 (40%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  5850  IINIPRSMVP  5821
             II++   M P
Sbjct  517   IIDVTSAMLP  526


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -2

Query  2493  GMV---NAVYFLKSSSKGTEK  2440
             G+V    AVY L S  K T+K
Sbjct  595   GLVAVDKAVYVLNSKHKLTQK  615


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2014  YSFMST  1997
             YS M T
Sbjct  1068  YSMMTT  1073


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  9035  VASPQILHI  9061
             V SP+  HI
Sbjct  35    VGSPESIHI  43


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4747  SELIL  4733
             S+LIL
Sbjct  76    SQLIL  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = +2

Query  6188  TNSSSGRMIMEK  6223
             T  SS    MEK
Sbjct  118   TSGSS---FMEK  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7571  FQSNPK  7554
             +QS PK
Sbjct  215   YQSTPK  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4838  SLHRME  4855
             SL+R E
Sbjct  291   SLQRVE  296


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  214  PFRFQV  197
            PF F V
Sbjct  371  PFHFRV  376


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2123  LVQSQ  2109
             LV+SQ
Sbjct  390   LVHSQ  394


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  6783  HFALLML  6763
             HF  L L
Sbjct  488   HFTILVL  494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4316  ILPFVLL  4296
             IL F LL
Sbjct  530   ILAFYLL  536


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8999  LSREA  9013
             L REA
Sbjct  708   LTREA  712


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4721  FIVMSIK  4701
             F+V S K
Sbjct  778   FVVVSLK  784


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4028  EAEV  4039
             EAEV
Sbjct  953   EAEV  956


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3055  VIIHSMY  3035
             VII S Y
Sbjct  999   VIILSRY  1005


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4625  RQDED  4639
             RQ ED
Sbjct  1092  RQAED  1096


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1516  LKHLT  1502
             LK+LT
Sbjct  1370  LKQLT  1374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3591  ESVTMFTSNP  3562
             ESV    SNP
Sbjct  1502  ESVEVSASNP  1511


>ref|NP_001123359.1|  dnaJ homolog subfamily C member 2 isoform 2 [Homo sapiens]
Length=568

 GENE ID: 27000 DNAJC2 | DnaJ (Hsp40) homolog, subfamily C, member 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  8268  YKELVEL  8288
             YKELVE+
Sbjct  543   YKELVEM  549


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  375  DRWEKI  392
            +RWEKI
Sbjct  522  ERWEKI  527


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +3

Query  8514  LEA------QEEEEV  8540
             LEA       EEEEV
Sbjct  317   LEAARLAKEKEEEEV  331


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = -2

Query  120  TTDGHTLLE-ALK  85
            TT+ + LLE ALK
Sbjct  502  TTEEQKLLEQALK  514


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  7209  EV--NYINI  7229
             EV  NY NI
Sbjct  425   EVIANYMNI  433


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  2702  EELRQH-LL  2725
             EE RQ+ LL
Sbjct  329   EEVRQQALL  337


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3714  KELEEM  3731
             KEL EM
Sbjct  544   KELVEM  549


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5419  LDASRA  5402
             L+ASRA
Sbjct  561   LNASRA  566


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6697  DTDSFSCI  6674
             D D F CI
Sbjct  134   DNDYFTCI  141


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1739  DNNSPSE  1759
             DN  PSE
Sbjct  483   DNATPSE  489


 Score = 16.8 bits (32),  Expect(2) = 24175
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
 Frame = +2

Query  4394  DIQTKELQKQITKIQN  4441
             DIQ K   K+  K  N
Sbjct  343   DIQKKAIKKERQKLRN  358


 Score = 15.1 bits (28),  Expect(2) = 24175
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4265  QVRDQA  4282
             +VR QA
Sbjct  330   EVRQQA  335


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5797  LVEM  5808
             LVEM
Sbjct  546   LVEM  549


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1128  IFYKF  1114
             IFY F
Sbjct  213   IFYSF  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2457  SKGTEK  2440
             SK TEK
Sbjct  384   SKNTEK  389


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5369  SKKWSQ  5386
             SK WS+
Sbjct  398   SKNWSE  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8397  RMRRA  8411
             RMR A
Sbjct  379   RMRQA  383


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1058  YPSGTN  1075
             +P GTN
Sbjct  416   FPAGTN  421


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1595  TPNER  1609
             TP ER
Sbjct  486   TPSER  490


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  5364  RRARNGAS  5387
             RR RN AS
Sbjct  41    RRNRN-AS  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3792  SIPSK  3778
             S+PSK
Sbjct  167   SVPSK  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7339  QEPKE  7325
             QE KE
Sbjct  306   QEAKE  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5406  LEASR  5420
             LEA R
Sbjct  317   LEAAR  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 2/16 (12%)
 Frame = +2

Query  8615  KR--KGGTGRANSLPK  8656
             KR  K   G A SL K
Sbjct  440   KRTAKDVIGKAKSLQK  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8793  DKIEEA  8810
             +KI EA
Sbjct  525   EKIAEA  530


>sp|Q9BPV8.2|P2Y13_HUMAN  RecName: Full=P2Y purinoceptor 13; Short=P2Y13; AltName: Full=G-protein 
coupled receptor 86; AltName: Full=G-protein coupled 
receptor 94
Length=354

 GENE ID: 53829 P2RY13 | purinergic receptor P2Y, G-protein coupled, 13
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  6094  YILMHLFYHVI  6062
             +ILM  FY VI
Sbjct  221   FILMLVFYVVI  231


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +2

Query  3977  LEGKV-ILVAV  4006
             LEGKV + VAV
Sbjct  253   LEGKVFVVVAV  263


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = -1

Query  2794  FITHPKEWRFFLMFFV  2747
             FI     W FFL FF+
Sbjct  166   FI-----W-FFL-FFI  174


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = +2

Query  8084  RDLLLIVTRIVEL  8122
             RD     TRIV+L
Sbjct  38    RD-----TRIVQL  45


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1420  TLALW  1406
             TLALW
Sbjct  63    TLALW  67


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 22/42 (52%)
 Frame = -1

Query  3826  TVIFLMFILGL----------IYSI*K*YFPDSSTD*F-IYL  3734
             TV+FL  IL L          I        P SST  F IYL
Sbjct  52    TVVFLTGIL-LNTLALWVFVHI--------PSSST--FIIYL  82


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1501  IFLWF  1487
             IF WF
Sbjct  165   IFIWF  169


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7710  KNRKTSKK  7733
             K+RK  KK
Sbjct  245   KDRKNNKK  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/22 (36%), Positives = 10/22 (45%), Gaps = 9/22 (40%)
 Frame = -2

Query  7632  CSRDLLLQLAFQGTAVVQMSFP  7567
             C RD         T +VQ+ FP
Sbjct  36    CPRD---------TRIVQLVFP  48


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2228  LPFPSLY  2208
             L FP LY
Sbjct  45    LVFPALY  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -1

Query  793  FKVLGD--MA*CTICPW  749
            FK+L D  +A     PW
Sbjct  98   FKILSDSHLA-----PW  109


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2877  TNFCM  2863
             TN CM
Sbjct  308   TNICM  312


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  1334  NSLTIWV  1314
             N L  WV
Sbjct  62    NTLALWV  68


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6294  FFINL  6308
             FFI L
Sbjct  172   FFISL  176


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1315  FAFWT  1301
             F FWT
Sbjct  215   FIFWT  219


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1332  ILKALGPAATLEEM  1373
             IL    P  TLE M
Sbjct  13    IL----PKVTLEAM  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3720  LEEMN  3734
             LE MN
Sbjct  19    LEAMN  23


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +1

Query  3640  RV----SQSNN  3660
             RV    SQ NN
Sbjct  275   RVPYTHSQTNN  285


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  3512  TNQKTE--LQ  3535
             TN KT+  LQ
Sbjct  283   TNNKTDCRLQ  292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  674  KSTASS  691
            K TASS
Sbjct  335  KTTASS  340


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4549  FYVTI  4535
             FYV I
Sbjct  227   FYVVI  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5294  LQQLLFI  5314
             LQ  LFI
Sbjct  291   LQNQLFI  297


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  952  LMVSFNI  932
            LM  F I
Sbjct  94   LMLPFKI  100


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2173  DRRKNK  2190
             DR  NK
Sbjct  246   DRKNNK  251


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2305  FSTVFF  2288
             FS V F
Sbjct  118   FSSVIF  123


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3817  FLMFI  3803
             FL FI
Sbjct  170   FLFFI  174


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4663  NTICMF  4680
             N IC F
Sbjct  210   NNICQF  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5161  CPFIVW  5144
             C FI W
Sbjct  213   CQFIFW  218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  2652  ICM  2660
             ICM
Sbjct  310   ICM  312


>ref|NP_001073279.1|  beta-galactosidase isoform b [Homo sapiens]
Length=647

 GENE ID: 2720 GLB1 | galactosidase, beta 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  1767  PIDKELYPLT  1796
             PI K LYPLT
Sbjct  367   PI-KSLYPLT  375


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  1124  FI---NFSYWD  1101
             FI   NF YW+
Sbjct  278   FIGGTNFAYWN  288


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 4/15 (26%)
 Frame = -1

Query  7675  NFSVPLHPGRVIPNL  7631
             NFS+P   G  IP+L
Sbjct  525   NFSIP--SG--IPDL  535


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  7890  LFTIESTAKTILK  7852
             LFT +   KT LK
Sbjct  187   LFTTDGAHKTFLK  199


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = -1

Query  6268  SY-ACADIERAVFYLSFLH  6215
             SY AC D +    YL FL+
Sbjct  161   SYFAC-DFD----YLRFLQ  174


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 5/22 (22%)
 Frame = +2

Query  3332  EWEFVNTPPLVKLWYQLEKEPI  3397
             EWE    P     W  LEKE I
Sbjct  99    EWEMGGLPA----W-LLEKESI  115


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2570  LLVIL  2556
             LLVIL
Sbjct  86    LLVIL  90


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  881  RFKHH  895
            RF HH
Sbjct  176  RFRHH  180


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2840  KDSW  2851
             KDSW
Sbjct  640   KDSW  643


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9008  EAWPG  9022
             E WPG
Sbjct  60    EPWPG  64


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8685  RSTDQGYL  8662
             RS D  YL
Sbjct  118   RSSDPDYL  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1307  KCEP  1318
             KCEP
Sbjct  227   KCEP  230


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  853  ENMG  842
            ENMG
Sbjct  448  ENMG  451


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2811  HLSGW  2797
             HL GW
Sbjct  493   HLGGW  497


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7533  FRYLS  7519
             FRY S
Sbjct  18    FRYIS  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  558  LRSLYNTV  581
            L  LY TV
Sbjct  203  LQGLYTTV  210


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1290  LSSNFL  1273
             LSSN L
Sbjct  471   LSSNIL  476


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1077  LFVPE  1063
             LFVP+
Sbjct  571   LFVPQ  575


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2257  SIQYS  2271
             SI+YS
Sbjct  24    SIHYS  28


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  4854  SILWRLPDPN  4825
             SIL R  DP+
Sbjct  114   SILLRSSDPD  123


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -1

Query  5269  CPSIPI------SFI  5243
             CPS PI       FI
Sbjct  363   CPSGPIKSLYPLTFI  377


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1749  PPQK  1760
             PPQK
Sbjct  635   PPQK  638


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3144  FRFLNGS  3124
             FR+  GS
Sbjct  18    FRYISGS  24


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1315  FAFW  1304
             FA+W
Sbjct  284   FAYW  287


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S YPL
Sbjct  370   SLYPL  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4029  SIYPL  4015
             S YPL
Sbjct  370   SLYPL  374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9046  SDPAY  9060
             SDP Y
Sbjct  120   SDPDY  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7109  SNIT  7120
             SNIT
Sbjct  216   SNIT  219


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  987   VHAGPIAP  1010
             V  GPI P
Sbjct  330   VPEGPIPP  337


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1955  FIKVRQ  1972
             FI V Q
Sbjct  376   FIQVKQ  381


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4124  NGSNFT  4141
             N SN+T
Sbjct  512   NSSNYT  517


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2902  DLPRD  2916
             DLP D
Sbjct  534   DLPQD  538


>sp|P16885.4|PLCG2_HUMAN  RecName: Full=1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase 
gamma-2; AltName: Full=Phosphoinositide phospholipase 
C-gamma-2; AltName: Full=Phospholipase C-gamma-2; Short=PLC-gamma-2; 
AltName: Full=Phospholipase C-IV; Short=PLC-IV
Length=1265

 GENE ID: 5336 PLCG2 | phospholipase C, gamma 2 (phosphatidylinositol-specific)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 24/52 (46%)
 Frame = +2

Query  4349  GGYSAGERI--------VDIIAT-DIQTKELQKQITKIQNFRVYYRDSRNPL  4477
             G Y  G RI        V+ I T D +  EL+KQI  I++         NPL
Sbjct  809   GDY--GTRIQQYFPSNYVEDISTADFE--ELEKQI--IED---------NPL  845


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8388  VRERM  8402
             VRERM
Sbjct  265   VRERM  269


 Score = 19.3 bits (38),  Expect(2) =  2185
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  4584  IMENRWQV  4607
             IME R QV
Sbjct  46    IMETR-QV  52


 Score = 17.2 bits (33),  Expect(2) =  2185
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  4696  DGFIDITM  4719
             +GF DI M
Sbjct  62    EGFLDI-M  68


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4684  PETYIWC  4664
             PE YI C
Sbjct  342   PEAYIRC  348


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2270  EYCMD  2256
             EYCM+
Sbjct  549   EYCME  553


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -2

Query  6417  CMGIGSKD-TF  6388
             CM  G KD TF
Sbjct  551   CMETGGKDGTF  561


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = +2

Query  5993  VPTDPNPQE  6019
             VP +PNP+E
Sbjct  635   VP-NPNPHE  642


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3641  ELVNQIIE  3664
             EL  QIIE
Sbjct  834   ELEKQIIE  841


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/25 (40%), Positives = 10/25 (40%), Gaps = 13/25 (52%)
 Frame = +3

Query  2322  ISENLIRELKT----------SGKF  2366
             IS    RELKT          S KF
Sbjct  161   IS---LRELKTILPLINFKVSSAKF  182


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 15/27 (55%)
 Frame = -2

Query  2508  SLFILGMVN-------AVY------FL  2467
             S FILG  N       AVY      FL
Sbjct  226   SVFILG--NTDRPDASAVYLHDFQRFL  250


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4310  AVFIHNFKR  4336
             AV+ H+F R
Sbjct  240   AVYLHDFQR  248


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -2

Query  444  PILYV---LIYIFS  412
            P L+V   L Y FS
Sbjct  283  PFLFVDEFLTYLFS  296


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  462  RFAVNPGLLE  491
            R+ V P LLE
Sbjct  732  RYPVTPELLE  741


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 9/30 (30%)
 Frame = +2

Query  6212  IMEKGEI---KNCS--FNISTSIRGKVQKE  6286
             IME  EI   KN S  F     +R   QKE
Sbjct  67    IMEIKEIRPGKN-SKDFERAKAVR---QKE  92


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4850  MEEKEI  4867
             ME KEI
Sbjct  68    MEIKEI  73


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2456  LRELK  2442
             LRELK
Sbjct  163   LRELK  167


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9035  LPSPAQ  9018
             LPSP Q
Sbjct  441   LPSPSQ  446


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8962  DIELA  8976
             DIELA
Sbjct  1174  DIELA  1178


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1981  DTHRNL  1998
             DTH NL
Sbjct  1218  DTHQNL  1223


 Score = 17.6 bits (34),  Expect(2) =  8534
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1233  FYKTLRAEQ  1259
             FYK L  EQ
Sbjct  205   FYKKLMFEQ  213


 Score = 15.9 bits (30),  Expect(2) =  8534
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1114  KFIKD  1128
             KF KD
Sbjct  181   KFLKD  185


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4702  FIDITM  4719
             FID TM
Sbjct  272   FIDDTM  277


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 12/24 (50%)
 Frame = +1

Query  496  QKAVD--KYWDSYNHPFRQDQKNL  561
            QK VD  KY          +QK L
Sbjct  969  QKPVDLLKY----------NQKGL  982


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6082  HLFY  6071
             HLFY
Sbjct  203   HLFY  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = +2

Query  7655  MEWDREINNYTSL  7693
             ME  R+IN   SL
Sbjct  745   ME--RDIN---SL  752


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  2068  QQ-ISSNYVD  2042
             QQ   SNYV+
Sbjct  816   QQYFPSNYVE  825


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4204  VGNSKF  4187
             V NSKF
Sbjct  1258  VSNSKF  1263


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/29 (27%), Positives = 9/29 (31%), Gaps = 19/29 (65%)
 Frame = -1

Query  6424  TIMYG-------------------NWLKG  6395
             TI+YG                   NWL G
Sbjct  97    TILYGTQFVLSTLSLAADSKEDAVNWLSG  125


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1751  PSEAGAD  1771
             P EA AD
Sbjct  433   PTEASAD  439


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = +3

Query  1008  PGQMRE----------PRG  1034
             P Q+RE          PRG
Sbjct  444   PSQLREKIIIKHKKLGPRG  462


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3552  CRIR  3563
             CRIR
Sbjct  586   CRIR  589


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7924  DPPPNP  7941
             DP PNP
Sbjct  633   DPVPNP  638


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3282  SFCMGSL  3262
             SFC G L
Sbjct  789   SFCRGAL  795


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = +2

Query  4721  KPSSKNK-------FR  4747
             KP SK K       FR
Sbjct  938   KPTSKTKDNLENPDFR  953


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5316  WINSS  5302
             WI SS
Sbjct  322   WISSS  326


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4951  FLIAESE  4931
             FL+ ESE
Sbjct  561   FLVRESE  567


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7558  PNPQE  7544
             PNP+E
Sbjct  638   PNPHE  642


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8544  FPVTPQ  8561
             +PVTP+
Sbjct  733   YPVTPE  738


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8461  MEQSQVA  8481
             ME  QVA
Sbjct  47    METRQVA  53


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  915  HQAAM  929
            HQ AM
Sbjct  130  HQEAM  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2706  SSIFVL  2689
             SS+F+L
Sbjct  225   SSVFIL  230


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  7006  VTS-FSVI  6986
             VTS F VI
Sbjct  395   VTSSFPVI  402


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6459  IRRSME  6476
             IR  ME
Sbjct  588   IRSTME  593


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8514  LEAQEE  8531
             LE +EE
Sbjct  1190  LESEEE  1195


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8793  DKIE  8804
             DKIE
Sbjct  59    DKIE  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4578  LGIME  4592
             L IME
Sbjct  65    LDIME  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7771  KFVE  7782
             KFVE
Sbjct  186   KFVE  189


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9058  YKQLLF  9075
             YK L+F
Sbjct  206   YKKLMF  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  879  QDLN  890
            QDLN
Sbjct  260  QDLN  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5175  RSLRM  5189
             R LRM
Sbjct  347   RCLRM  351


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8124  WDAGGGKP  8147
             WD   GKP
Sbjct  361   WDGPDGKP  368


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 10/18 (55%)
 Frame = +3

Query  1017  MREPR----------GSD  1040
             MR PR          GSD
Sbjct  661   MRIPRDGAFLIRKREGSD  678


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4805  YRRKRL  4822
             YR  RL
Sbjct  726   YRKMRL  731


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8742  RYPLT  8756
             RYP T
Sbjct  732   RYPVT  736


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  6433  WFCDSKM  6453
             W C S M
Sbjct  1003  WLCGSQM  1009


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1491  QRKI  1502
             QRKI
Sbjct  1056  QRKI  1059


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3338  PTQE  3327
             PTQE
Sbjct  1115  PTQE  1118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1643  DLAFL  1657
             +LAFL
Sbjct  1128  NLAFL  1132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8167  PTVLES  8184
             PT+ ES
Sbjct  139   PTIIES  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1035  FPLVLS  1018
             FP +LS
Sbjct  399   FPVILS  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4038  TSASIYPL  4015
             T  SIY L
Sbjct  606   TFSSIYAL  613


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7217  LYKYK  7231
             LY YK
Sbjct  777   LYDYK  781


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5158  PFIVWL  5141
             PF  WL
Sbjct  999   PFRLWL  1004


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4426  YKNSKF  4443
             Y N KF
Sbjct  1094  YDNNKF  1099


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6218  EKGEIK  6235
             EK +IK
Sbjct  14    EKSQIK  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +2

Query  7277  RRVVQ--REKRAV  7309
             RR VQ   E R V
Sbjct  40    RRTVQVIMETRQV  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6850  DYCFII  6833
             D CF I
Sbjct  93    DCCFTI  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -3

Query  3125  LDKF--DMSIGLAPASVFLL  3072
             LD F  D        SVF L
Sbjct  218   LDEFKKD-------SSVFIL  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2332  FSEIY  2318
             FS IY
Sbjct  607   FSSIY  611


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6758  HCNISR  6775
             HC I R
Sbjct  692   HCRINR  697


>ref|NP_002369.2|  megakaryocyte-associated tyrosine-protein kinase isoform b [Homo 
sapiens]
Length=508

 GENE ID: 4145 MATK | megakaryocyte-associated tyrosine kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  749  DVLHYRV  729
            DV HYRV
Sbjct  166  DVIHYRV  172


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  7896  GRDIHHYR  7919
             GRD+ HYR
Sbjct  164   GRDVIHYR  171


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  8166  RFHQYLRASHP  8134
             RF   LRA HP
Sbjct  29    RF---LRAWHP  36


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -1

Query  9049  LRARHSPVPPRPRLP  9005
             LRA H P P   R+P
Sbjct  31    LRAWHPP-PVSARMP  44


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  2328  ENLIRELKTSG  2360
             E L REL   G
Sbjct  477   EKLARELRSAG  487


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3276  KRKHG  3290
             KRKHG
Sbjct  212   KRKHG  216


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2249  AQFLKFSL  2226
             AQ L FSL
Sbjct  328   AQLLQFSL  335


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  774  ISPRTLNAW  800
            +SPR L AW
Sbjct  26   VSPRFLRAW  34


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  6900  IVEGNFSTVIQ  6932
             I EG F  V Q
Sbjct  242   IGEGEFGAVLQ  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3191  KQLTEAVQK  3217
             K+  EAV+K
Sbjct  432   KEVSEAVEK  440


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1601  LVSFLST  1581
             LV FL T
Sbjct  313   LVNFLRT  319


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8473  QVAIQQL  8493
             Q A+QQL
Sbjct  131   QEAVQQL  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3450  NLVSLL  3433
             NLV LL
Sbjct  288   NLVRLL  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  943  RPSMRKL  963
            RP  RKL
Sbjct  469  RPPFRKL  475


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7454  QQHLL  7468
             QQ+LL
Sbjct  21    QQQLL  25


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8900  QPPSISSR  8923
             +PP +S R
Sbjct  35    HPPPVSAR  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5291  ILQQLLFI  5314
             IL+Q L+I
Sbjct  296   ILHQGLYI  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PPE C
Sbjct  446   PPEGC  450


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1746  TPPQKQEP  1769
             T P  QEP
Sbjct  501   TSPRSQEP  508


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1045  QELLV  1059
             Q+LLV
Sbjct  22    QQLLV  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4803  ADPNMLLLP  4777
             ADP + L+P
Sbjct  114   ADPKLSLMP  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7517  VERYLKD  7537
             VE Y KD
Sbjct  194   VEHYSKD  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3737  LVHFL  3723
             LV FL
Sbjct  313   LVNFL  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2592  FVMLLW  2575
             F  LLW
Sbjct  411   FGVLLW  416


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6993  LKEVTQ  7010
             LKEV +
Sbjct  431   LKEVSE  436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8871  EREVL  8885
             ERE L
Sbjct  108   EREAL  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3252  LLNL  3263
             LLNL
Sbjct  230   LLNL  233


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5019  LQYLALAA  5042
             LQ L L A
Sbjct  233   LQHLTLGA  240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  6140  GLILHMAL  6117
             G ILH  L
Sbjct  294   GVILHQGL  301


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3836  AMASDFNL  3859
             A  SDF L
Sbjct  367   AKVSDFGL  374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8925  AREL  8936
             AREL
Sbjct  480   AREL  483


>gb|ABG38423.1|  immunglobulin heavy chain variable region [Homo sapiens]
Length=121


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 6/25 (24%)
 Frame = +3

Query  9039  RALR-SCI*AA---AFCLYWVSLVR  9101
             R LR SC+  A    F  YW S VR
Sbjct  17    RSLRLSCV--AFGFTFSSYWMSWVR  39


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  70    TISRDNAKN  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  51    NIKQD  55


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  56    GSEKYYVD  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  61    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  90


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  34    WMSWVRQ  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  54    QDGSEKY  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  32    SYWMSWV  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  50   ANIKQD  55


>gb|AAV69612.1|  immune receptor expressed on myeloid cells 3 [Homo sapiens]
Length=201

 GENE ID: 124599 CD300LB | CD300 molecule-like family member b [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4307  MAVFIHNFKR  4336
             MAVFI   KR
Sbjct  139   MAVFIRSHKR  148


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  184  APEQG  198
            APEQG
Sbjct  26   APEQG  30


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -3

Query  6029  PILL-LV  6012
             PILL LV
Sbjct  160   PILLILV  166


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4524  TTAPSP  4507
             TTA SP
Sbjct  129   TTASSP  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1982  ILIE  1993
             ILIE
Sbjct  60    ILIE  63


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  190  EQGPESER  213
            EQG  S+R
Sbjct  68   EQGEKSDR  75


>ref|NP_055192.1|  dnaJ homolog subfamily C member 2 isoform 1 [Homo sapiens]
Length=621

 GENE ID: 27000 DNAJC2 | DnaJ (Hsp40) homolog, subfamily C, member 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  8268  YKELVEL  8288
             YKELVE+
Sbjct  596   YKELVEM  602


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  375  DRWEKI  392
            +RWEKI
Sbjct  575  ERWEKI  580


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +3

Query  8514  LEA------QEEEEV  8540
             LEA       EEEEV
Sbjct  317   LEAARLAKEKEEEEV  331


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = -2

Query  120  TTDGHTLLE-ALK  85
            TT+ + LLE ALK
Sbjct  555  TTEEQKLLEQALK  567


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  7209  EV--NYINI  7229
             EV  NY NI
Sbjct  478   EVIANYMNI  486


 Score = 16.8 bits (32),  Expect(2) = 13435
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 6/22 (27%)
 Frame = +3

Query  921  AAMQMLKETINE------EAAE  968
            AA++   E INE      E AE
Sbjct  409  AALEKQIEEINEQIRKEKEEAE  430


 Score = 16.3 bits (31),  Expect(2) = 13435
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1058  YPSGTN  1075
             +P GTN
Sbjct  469   FPAGTN  474


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  2702  EELRQH-LL  2725
             EE RQ+ LL
Sbjct  329   EEVRQQALL  337


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3714  KELEEM  3731
             KEL EM
Sbjct  597   KELVEM  602


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5419  LDASRA  5402
             L+ASRA
Sbjct  614   LNASRA  619


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6697  DTDSFSCI  6674
             D D F CI
Sbjct  134   DNDYFTCI  141


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1739  DNNSPSE  1759
             DN  PSE
Sbjct  536   DNATPSE  542


 Score = 16.8 bits (32),  Expect(2) = 23325
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
 Frame = +2

Query  4394  DIQTKELQKQITKIQN  4441
             DIQ K   K+  K  N
Sbjct  343   DIQKKAIKKERQKLRN  358


 Score = 15.1 bits (28),  Expect(2) = 23325
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4265  QVRDQA  4282
             +VR QA
Sbjct  330   EVRQQA  335


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5797  LVEM  5808
             LVEM
Sbjct  599   LVEM  602


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1128  IFYKF  1114
             IFY F
Sbjct  213   IFYSF  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7151  SNNESE  7168
             S+NE E
Sbjct  367   SDNEAE  372


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3731  EQVDKL  3748
             E+V+KL
Sbjct  378   EEVEKL  383


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2457  SKGTEK  2440
             SK TEK
Sbjct  437   SKNTEK  442


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5369  SKKWSQ  5386
             SK WS+
Sbjct  451   SKNWSE  456


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8397  RMRRA  8411
             RMR A
Sbjct  432   RMRQA  436


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1595  TPNER  1609
             TP ER
Sbjct  539   TPSER  543


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  5364  RRARNGAS  5387
             RR RN AS
Sbjct  41    RRNRN-AS  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3792  SIPSK  3778
             S+PSK
Sbjct  167   SVPSK  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7339  QEPKE  7325
             QE KE
Sbjct  306   QEAKE  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5406  LEASR  5420
             LEA R
Sbjct  317   LEAAR  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 2/16 (12%)
 Frame = +2

Query  8615  KR--KGGTGRANSLPK  8656
             KR  K   G A SL K
Sbjct  493   KRTAKDVIGKAKSLQK  508


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8793  DKIEEA  8810
             +KI EA
Sbjct  578   EKIAEA  583


>ref|NP_008820.2|  T-lymphocyte activation antigen CD86 isoform 2 precursor [Homo 
sapiens]
Length=323

 GENE ID: 942 CD86 | CD86 molecule [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 7/27 (25%)
 Frame = +2

Query  3626  DQSESELV----NQIIEQLIKKEKVYL  3694
             +QS SELV    +Q  E L+  E VYL
Sbjct  41    NQSLSELVVFWQDQ--ENLVLNE-VYL  64


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1089  LSSILFV  1069
             LS ILFV
Sbjct  3     LSNILFV  9


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  538  FRQDQKNL  561
            F QDQ NL
Sbjct  50   FWQDQENL  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5218  PNPRKMS  5198
             P P KMS
Sbjct  158   PEPKKMS  164


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  4474  WISAV-P-VI  4451
             WI AV P VI
Sbjct  242   WITAVLPTVI  251


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             +NLTC
Sbjct  147   INLTC  151


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8262  SITLSV  8245
             SI LSV
Sbjct  194   SISLSV  199


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1299  TRFLSSNF  1276
             TR LSS F
Sbjct  219   TRLLSSPF  226


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4946  KK--GLIRTH  4969
             KK  G+IR H
Sbjct  109   KKPTGMIRIH  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1537  QPEI  1548
             QPEI
Sbjct  132   QPEI  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6308  DIIPIDN  6328
             +I+PI N
Sbjct  134   EIVPISN  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  6478  RTMYKCQHSTM  6510
             R  YKC   TM
Sbjct  271   RNSYKCGTNTM  281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7338  WEQQEAL  7358
             W+ QE L
Sbjct  51    WQDQENL  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4665  VLLNFS  4648
             VL NFS
Sbjct  126   VLANFS  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8778  LACSTIQ  8758
             L CS I+
Sbjct  149   LTCSSIH  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  218  VSLSLS  201
            VS SLS
Sbjct  193  VSISLS  198


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  1784  VSFNFPQVT  1810
             VSF  P VT
Sbjct  199   VSF--PDVT  205


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +1

Query  7906  FTIIVSDPPPNPE  7944
             F I   DP P P+
Sbjct  226   FSIELEDPQPPPD  238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3890  SCDK  3901
             SCDK
Sbjct  315   SCDK  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6443  SQNQ  6432
             SQNQ
Sbjct  39    SQNQ  42


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  3116  FDMSIGLAPASV  3081
             +D SI L   SV
Sbjct  191   YDVSISL---SV  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5983  CGPNIM  5966
             CG N M
Sbjct  276   CGTNTM  281


>ref|NP_787058.3|  T-lymphocyte activation antigen CD86 isoform 1 [Homo sapiens]
Length=329

 GENE ID: 942 CD86 | CD86 molecule [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 7/27 (25%)
 Frame = +2

Query  3626  DQSESELV----NQIIEQLIKKEKVYL  3694
             +QS SELV    +Q  E L+  E VYL
Sbjct  47    NQSLSELVVFWQDQ--ENLVLNE-VYL  70


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1089  LSSILFV  1069
             LS ILFV
Sbjct  9     LSNILFV  15


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  538  FRQDQKNL  561
            F QDQ NL
Sbjct  56   FWQDQENL  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5218  PNPRKMS  5198
             P P KMS
Sbjct  164   PEPKKMS  170


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  4474  WISAV-P-VI  4451
             WI AV P VI
Sbjct  248   WITAVLPTVI  257


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             +NLTC
Sbjct  153   INLTC  157


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8262  SITLSV  8245
             SI LSV
Sbjct  200   SISLSV  205


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1299  TRFLSSNF  1276
             TR LSS F
Sbjct  225   TRLLSSPF  232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4946  KK--GLIRTH  4969
             KK  G+IR H
Sbjct  115   KKPTGMIRIH  124


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1537  QPEI  1548
             QPEI
Sbjct  138   QPEI  141


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6308  DIIPIDN  6328
             +I+PI N
Sbjct  140   EIVPISN  146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  6478  RTMYKCQHSTM  6510
             R  YKC   TM
Sbjct  277   RNSYKCGTNTM  287


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7338  WEQQEAL  7358
             W+ QE L
Sbjct  57    WQDQENL  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4665  VLLNFS  4648
             VL NFS
Sbjct  132   VLANFS  137


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8778  LACSTIQ  8758
             L CS I+
Sbjct  155   LTCSSIH  161


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  218  VSLSLS  201
            VS SLS
Sbjct  199  VSISLS  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  1784  VSFNFPQVT  1810
             VSF  P VT
Sbjct  205   VSF--PDVT  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +1

Query  7906  FTIIVSDPPPNPE  7944
             F I   DP P P+
Sbjct  232   FSIELEDPQPPPD  244


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3890  SCDK  3901
             SCDK
Sbjct  321   SCDK  324


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6763  TMCLSHI  6743
             TM LS I
Sbjct  6     TMGLSNI  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6443  SQNQ  6432
             SQNQ
Sbjct  45    SQNQ  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  3116  FDMSIGLAPASV  3081
             +D SI L   SV
Sbjct  197   YDVSISL---SV  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5983  CGPNIM  5966
             CG N M
Sbjct  282   CGTNTM  287


>sp|Q6IN85.1|P4R3A_HUMAN  RecName: Full=Serine/threonine-protein phosphatase 4 regulatory 
subunit 3A; AltName: Full=SMEK homolog 1
Length=833

 GENE ID: 55671 SMEK1 | SMEK homolog 1, suppressor of mek1 (Dictyostelium)
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4007  HVASGYIE  4030
             HV SGY+E
Sbjct  26    HVSSGYVE  33


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 9/10 (90%), Gaps = 0/10 (0%)
 Frame = +2

Query  3644  LVNQIIEQLI  3673
             L+N IIE++I
Sbjct  426   LINLIIEHMI  435


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -1

Query  2065  QISSNYVDR  2039
             ++SS YV+R
Sbjct  26    HVSSGYVER  34


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -3

Query  7412  YQ----TIIVW  7392
             YQ    T IVW
Sbjct  62    YQKQQDTLIVW  72


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  7396  TIIVWYSAAAEQFAEGY  7446
             T IVW     E  AE Y
Sbjct  68    TLIVW----SE--AENY  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  181  LLEIFH  164
            LLE FH
Sbjct  173  LLELFH  178


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  3248  KTPKFK--LPI  3274
             KT KFK   PI
Sbjct  242   KTAKFKEVIPI  252


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7838  GGLVGL  7855
             GGLVGL
Sbjct  798   GGLVGL  803


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2171  LTEEKI  2188
             LTE+KI
Sbjct  414   LTEQKI  419


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2604  LLENKI  2621
             LLE KI
Sbjct  51    LLESKI  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6910  GIFLL  6924
             GIFLL
Sbjct  198   GIFLL  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  8342  LIAKSFPSP  8316
             L+A S PSP
Sbjct  146   LVASSLPSP  154


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 22/44 (50%)
 Frame = -3

Query  3077  LLLSLL---MGHNTLH-------------VLVLLES------LC  3012
             L L LL     H T H             VLVL+ S      LC
Sbjct  511   LVLELLTFCVEHHTYHIKNYIINKDILRRVLVLMASKHAFLALC  554


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  548   HAFLAL  553


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5065  FIFF  5054
             FIFF
Sbjct  292   FIFF  295


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8622  KGGLEGLI  8645
             KGGL GL+
Sbjct  797   KGGLVGLV  804


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2380  TSRRVK  2397
             T RRVK
Sbjct  4     TRRRVK  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 14/46 (30%), Positives = 15/46 (32%), Gaps = 29/46 (63%)
 Frame = -1

Query  4681  ETYIWCFTK----LFHVLILILSTC---------HTIITCHLFSII  4583
             E YI    K    LFHV       C         H     HL+ II
Sbjct  167   EGYI----KKLLELFHV-------CEDLENIEGLH-----HLYEII  196


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8144  LPTPCV  8127
             LPTP V
Sbjct  275   LPTPSV  280


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4257  IFFN  4246
             IFFN
Sbjct  293   IFFN  296


 Score = 16.8 bits (32),  Expect(2) = 20626
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6645  TDVFS  6631
             TD+FS
Sbjct  382   TDIFS  386


 Score = 15.1 bits (28),  Expect(2) = 20626
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6613  SIVRE  6599
             S VRE
Sbjct  394   SMVRE  398


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8981  LVASSM  8964
             LVASS+
Sbjct  146   LVASSL  151


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  703  DTAIRSA  723
            DT +RSA
Sbjct  374  DTQVRSA  380


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  4881  DPEL--ADQL  4904
             DPEL  A QL
Sbjct  439   DPELGGAVQL  448


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4347  LGGTVQ  4364
             LGG VQ
Sbjct  442   LGGAVQ  447


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4320  MNTAI  4306
             MN AI
Sbjct  597   MNSAI  601


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  2722  QMLS---QLLYFC  2693
             Q+L    +LL FC
Sbjct  507   QLLALVLELLTFC  519


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3846  LAIALQLL  3823
             LA  L+LL
Sbjct  509   LALVLELL  516


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2809  FIRME  2795
             FIR E
Sbjct  607   FIRVE  611


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  529  NHPFRQDQKNLD  564
            NH +R D   L+
Sbjct  665  NHRYRRDARTLE  676


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  1577  EMW  1585
             EMW
Sbjct  680   EMW  682


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 3/22 (13%)
 Frame = -2

Query  6615  LALS--VKLTDLITTSSSARLP  6556
             L LS   K T+L   SS   LP
Sbjct  746   LSLSSGTK-TNLTSQSSTTNLP  766


 Score = 15.1 bits (28),  Expect(2) = 40655
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5770  NESEGE  5787
             +ESE E
Sbjct  115   DESEEE  120


 Score = 15.1 bits (28),  Expect(2) = 40655
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5785  EISALV  5802
             EI  LV
Sbjct  142   EIAELV  147


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6130  KINP  6141
             KINP
Sbjct  55    KINP  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8954  ELLTSSL  8974
             EL  SSL
Sbjct  145   ELVASSL  151


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1703  SPTRRE  1720
             SP RRE
Sbjct  153   SPLRRE  158


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2966  EVIP  2977
             EVIP
Sbjct  248   EVIP  251


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6293  FFYKLDII  6316
             FF K +I+
Sbjct  294   FFNKVEIV  301


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  874  VAPSDNAEN  848
            V PSD   N
Sbjct  697  VSPSDKTKN  705


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9156  SIKLALS  9176
             S KL LS
Sbjct  743   SFKLSLS  749


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4984  VNIKQD  5001
             V+I QD
Sbjct  107   VDITQD  112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  3798  ALSIPSKNSTFL  3763
             ALS P K   FL
Sbjct  229   ALSQPRKHREFL  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3737  LVHFL  3723
             LV FL
Sbjct  331   LVNFL  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1601  LVSFL  1587
             LV FL
Sbjct  331   LVNFL  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1999  TDFYEYLI  1976
             TD + YL+
Sbjct  382   TDIFSYLV  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5250  LMGIL  5264
             LMG L
Sbjct  448   LMGLL  452


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8816  FIGLFY  8799
             F G FY
Sbjct  473   FLGFFY  478


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1546  FLAVC  1532
             FLA C
Sbjct  550   FLALC  554


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1449  NSATIMM  1469
             NSA I M
Sbjct  598   NSAIIEM  604


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  618  LSLSF  604
            L LSF
Sbjct  80   LALSF  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  247  PSPASRE  227
            PSP  RE
Sbjct  152  PSPLRRE  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3308  TLSTM  3294
             TLS M
Sbjct  356   TLSNM  360


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3462  DMLLI  3476
             D LLI
Sbjct  423   DILLI  427


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8808  ANKGENT  8828
             ANK E T
Sbjct  465   ANKTEKT  471


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  541  RQDQKNLD  564
            RQD   LD
Sbjct  650  RQDNPKLD  657


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8514  LEAQEE  8531
             LE +EE
Sbjct  675   LEDEEE  680


>ref|NP_937839.1|  T-cell surface protein tactile isoform 1 precursor [Homo sapiens]
 sp|P40200.2|TACT_HUMAN  RecName: Full=T-cell surface protein tactile; AltName: Full=T 
cell-activated increased late expression protein; AltName: 
Full=Cell surface antigen CD96; AltName: CD_antigen=CD96; Flags: 
Precursor
Length=585

 GENE ID: 10225 CD96 | CD96 molecule [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -2

Query  3600  AY---CES-VTMFTSNPE  3559
             AY   CES VT FT  PE
Sbjct  80    AYGRPCESLVT-FTETPE  96


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2908  VNLTCPIQ  2885
             VNLTC  Q
Sbjct  41    VNLTCQTQ  48


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  7724  GFAILQLRSVL  7692
             GF  L+L SVL
Sbjct  329   GF--LELKSVL  337


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  162  VWKISS  179
            VW ISS
Sbjct  366  VWNISS  371


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  4306  LYCCLKMFSL  4277
             L+CC+ +F L
Sbjct  529   LFCCMILFGL  538


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  2462  LHLRELKNM  2436
             LHLR   NM
Sbjct  103   LHLR---NM  108


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             + LTIW
Sbjct  349   DNLTIW  354


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4623  LATQSSPA  4600
             L TQ SPA
Sbjct  396   LDTQPSPA  403


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = -1

Query  6736  FSYCNKCSPWSSLDTD  6689
             F Y     PW S  TD
Sbjct  443   FNY-----PWTSSGTD  453


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6039  VTFTNT  6022
             VTFT T
Sbjct  89    VTFTET  94


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  844  PCFQ  855
            PCFQ
Sbjct  162  PCFQ  165


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8296  VANSSTSS  8273
             V NSST S
Sbjct  181   VENSSTDS  188


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = -3

Query  7223  YI--IHF  7209
             YI  IHF
Sbjct  12    YIIQIHF  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2573  FQSSMTKI  2596
             FQ S  KI
Sbjct  164   FQNSSSKI  171


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3205  GSAKNNH  3225
             GS K NH
Sbjct  498   GSTKTNH  504


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  137  EIPQTL  154
            EI QTL
Sbjct  154  EINQTL  159


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +2

Query  1667  AREFSSEQTRANSPT  1711
             AR FS   T AN  T
Sbjct  486   ARAFSEVPTTANGST  500


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  6900  IVEGNFST  6923
             IVE N ST
Sbjct  274   IVENN-ST  280


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8274  PCTTSITL  8251
             P T S+TL
Sbjct  412   PATSSVTL  419


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2408  SVTVLDV  2428
             SVT  DV
Sbjct  416   SVTLVDV  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5301  CCRIL  5287
             CC IL
Sbjct  531   CCMIL  535


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  379  DGKKF  393
            DG KF
Sbjct  241  DGRKF  245


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9112  LRSGLTR  9092
             L S LTR
Sbjct  333   LKSVLTR  339


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  27   LRSGLTR  7
            L S LTR
Sbjct  333  LKSVLTR  339


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4368  SPALYP  4351
             SPA YP
Sbjct  407   SPARYP  412


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  852  SALSEGATPQ  881
            SAL    TPQ
Sbjct  423  SALRPNTTPQ  432


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  1905  ISSNTVSSAP  1876
             I S T SS P
Sbjct  461   IPSETYSSSP  470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  559   PPPPP  563


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2344  SLIKFSE  2324
             SL+ F E
Sbjct  87    SLVTFTE  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  4320  STILKEKGGLG  4352
             ST LK+   LG
Sbjct  216   STLLKDRVKLG  226


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4566  FLLG  4555
             FLLG
Sbjct  376   FLLG  379


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5033  TSSINNTKK  5059
             TSS  +TKK
Sbjct  448   TSSGTDTKK  456


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2188  KSISR  2202
             KS+SR
Sbjct  456   KSVSR  460


>ref|NP_003831.2|  tumor necrosis factor receptor superfamily member 10D precursor 
[Homo sapiens]
Length=386

 GENE ID: 8793 TNFRSF10D | tumor necrosis factor receptor superfamily, member
10d, decoy with truncated death domain [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -2

Query  7416  TIPDNN---CLACTV  7381
             TI  NN   CL CTV
Sbjct  106   TIASNNLPSCLLCTV  120


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +3

Query  714  QVSQNYPIVQNIQGQ  758
            QVS+     Q IQGQ
Sbjct  289  QVSE-----QEIQGQ  298


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 6/28 (21%)
 Frame = +3

Query  1296  LLVQ--NANP-DCKTILKALGPAATLEE  1370
             LLV   +A+  D  T L A    ATLEE
Sbjct  331   LLVPVNDADSADISTLLDA---SATLEE  355


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1990  YEYLII  1973
             Y YLII
Sbjct  210   YHYLII  215


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 11/31 (35%)
 Frame = +1

Query  5740  RLIERAEDSG----------NESE-GEISAL  5799
             RL E AE  G          N+ +  +IS L
Sbjct  316   RLLEQAEAEGCQRRRLLVPVNDADSADISTL  346


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  633  LPWCLL  616
            LP CLL
Sbjct  112  LPSCLL  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6579  TSSSAR  6562
             T SSAR
Sbjct  10    TASSAR  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5995  YTGMCGP  5975
             YTG C P
Sbjct  92    YTGACNP  98


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5825  TMLLGML  5845
             T  LGML
Sbjct  200   TTILGML  206


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7569  PEQPQ  7555
             PE+PQ
Sbjct  311   PEEPQ  315


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5838  PRSMV  5824
             PR MV
Sbjct  163   PRGMV  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -3

Query  275  RLLPCALQQAE  243
            RLL    +QAE
Sbjct  316  RLL----EQAE  322


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6101  LWDQS  6115
             LW QS
Sbjct  3     LWGQS  7


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  863  RRSHPTR  883
            RRS P R
Sbjct  261  RRSCPSR  267


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5435  LLVPI  5449
             LLVP+
Sbjct  331   LLVPV  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  181  VAPEQ  195
            VAP+Q
Sbjct  69   VAPQQ  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4645  VLILIL  4628
             VL+ IL
Sbjct  218   VLVIIL  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4820  VSFSC  4806
             V FSC
Sbjct  228   VGFSC  232


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4159  RLLVGGNQA  4185
             RLLV  N A
Sbjct  330   RLLVPVNDA  338


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7372  NDAD  7383
             NDAD
Sbjct  336   NDAD  339


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 10/13 (76%), Gaps = 2/13 (15%)
 Frame = +2

Query  8195  NSA-VS-LLNATA  8227
             +SA +S LL+A A
Sbjct  339   DSADISTLLDASA  351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8526  EEEEVG  8543
             EE+E G
Sbjct  375   EEDEAG  380


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8924  GPRAASG  8944
             G R ASG
Sbjct  21    GARTASG  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5453  IVKSVAFI  5476
             I K V FI
Sbjct  37    ILKFVVFI  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5284  NKNSATT  5304
             NK S TT
Sbjct  127   NKSSCTT  133


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6706  TRESIC  6723
             TR+ +C
Sbjct  134   TRDTVC  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4358  CTPQS  4344
             CTP S
Sbjct  172   CTPRS  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  972  DRVHPV  989
            +RVH V
Sbjct  252  ERVHRV  257


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  747  IQGQMV  764
            IQ Q+V
Sbjct  362  IQDQLV  367


>ref|NP_067674.2|  low affinity immunoglobulin gamma Fc region receptor II-a isoform 
2 [Homo sapiens]
Length=316

 GENE ID: 2212 FCGR2A | Fc fragment of IgG, low affinity IIa, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  96    NDSGEYTCQT  105


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  1381  AVIISSSVAA  1352
             AV+I   VAA
Sbjct  220   AVVIATAVAA  229


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6474  PLNVLLL  6454
             PL VLLL
Sbjct  21    PLTVLLL  27


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  2830  AARKRQLD  2853
             A RKRQL+
Sbjct  267   AIRKRQLE  274


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = -1

Query  2914  PWVN--------LTC  2894
             PW+N        LTC
Sbjct  47    PWINVLQEDSVTLTC  61


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1990  RNLW  2001
             RNLW
Sbjct  14    RNLW  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  122   WLVLQ  126


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  80    LIPTHTQ  86


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7922  ETIM  7911
             ETIM
Sbjct  136   ETIM  139


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/36 (33%), Positives = 12/36 (33%), Gaps = 21/36 (58%)
 Frame = -2

Query  8259  ITLSVPS---------------ATAMA------VAL  8215
             IT  VPS               ATA A      VAL
Sbjct  202   ITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVAL  237


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  4135  IAAIVS-----MYC  4109
             +AAIV       YC
Sbjct  227   VAAIVAAVVALIYC  240


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4143  VLRLGPP  4163
             VL L PP
Sbjct  41    VLKLEPP  47


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 10/33 (30%)
 Frame = -1

Query  7216  FTS-PI-----VPHISSSRSEDLGLIVA--ITT  7142
             F S P+     VP   SS    +G IVA  I T
Sbjct  195   FSSKPVTITVQVPSMGSSSP--MGIIVAVVIAT  225


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  104   QTGQTSLS  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = +3

Query  3678  RKRSIWHGYQHTKELEEMN  3734
             RKR          +LEE N
Sbjct  269   RKR----------QLEETN  277


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  169   PTFSI  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3539  IYLAL  3553
             IYL L
Sbjct  302   IYLTL  306


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3038  VLVLLES  3018
             VL LL S
Sbjct  24    VLLLLAS  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V LTC+
Sbjct  57    VTLTCQ  62


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  96    NDSGE  100


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  113   PVHLTVL  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T+F S P
Sbjct  193   TLFSSKP  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9020  QATPP  9006
             QA PP
Sbjct  34    QAAPP  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8656  EDKISLIC  8679
             ED + L C
Sbjct  54    EDSVTLTC  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  144   SWKDKPL  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = +3

Query  1077  GWMTNNPPIPVGE---IY  1121
             G MT NP  P  +   IY
Sbjct  286   GYMTLNPRAPTDDDKNIY  303


>ref|NP_000005.2|  alpha-2-macroglobulin precursor [Homo sapiens]
Length=1474

 GENE ID: 2 A2M | alpha-2-macroglobulin [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4687  FPETYIW  4667
             FPET IW
Sbjct  735   FPETWIW  741


 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -3

Query  2156  LLGHPFLALILLV  2118
             LL HP L L LLV
Sbjct  6     LL-HPSLVLLLLV  17


 Score = 22.7 bits (46),  Expect(2) =   456
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -2

Query  4758  GCVLLNLFLDE  4726
             GCVLL  +L+E
Sbjct  47    GCVLLS-YLNE  56


 Score = 16.8 bits (32),  Expect(2) =   456
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4798  PQYVV  4784
             PQY V
Sbjct  29    PQYMV  33


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -1

Query  853  ENMGITSGLKAF  818
            E+MG    LKAF
Sbjct  671  EDMG----LKAF  678


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 16/32 (50%)
 Frame = -2

Query  7641  FQICSRD----LLLQLAFQGTAVVQMSFPEQP  7558
             FQ+   D    LLLQ         Q S PE P
Sbjct  1290  FQV---DNNNRLLLQ---------QVSLPELP  1309


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 7/20 (35%)
 Frame = +2

Query  1895  LEEMSLPG------RWKPKM  1936
             LE+M L        R KPKM
Sbjct  670   LEDMGLKAFTNSKIR-KPKM  688


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  417  FSFPL  403
            FSFPL
Sbjct  190  FSFPL  194


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2831  LPEKD  2845
             LPEKD
Sbjct  622   LPEKD  626


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2262  TILQYLP  2282
             T+L YLP
Sbjct  813   TVLNYLP  819


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  9116  QAQIWSNQR  9090
             QA IW  QR
Sbjct  1065  QALIWLSQR  1073


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  31    QAQIWSNQR  5
             QA IW  QR
Sbjct  1065  QALIWLSQR  1073


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8805  LLSYL  8791
             LLSYL
Sbjct  50    LLSYL  54


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5781  FTLIATV  5761
             FTL ATV
Sbjct  808   FTLKATV  814


 Score = 17.6 bits (34),  Expect(2) =  9629
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5114  LVPSIL  5097
             LVPS L
Sbjct  34    LVPSLL  39


 Score = 15.5 bits (29),  Expect(2) =  9629
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  5141  PSVALGLLGLVP  5106
             PS  L LL L P
Sbjct  9     PSLVLLLLVLLP  20


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = +2

Query  5996  PTDPN----PQEVVLV  6031
             PTD      PQ  VLV
Sbjct  20    PTDASVSGKPQYMVLV  35


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2531  YNVLPQ  2548
             YN+LP+
Sbjct  1330  YNILPE  1335


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = -2

Query  4554  TTFMSLLSCITTAPS  4510
             TTF SLL C    PS
Sbjct  914   TTFNSLL-C----PS  923


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  6406  NSHTLLCP  6429
             NS  LLCP
Sbjct  917   NS--LLCP  922


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4787  NILGSA  4804
             +ILGSA
Sbjct  953   DILGSA  958


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3631  LIWL  3620
             LIWL
Sbjct  1067  LIWL  1070


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 7/20 (35%)
 Frame = +3

Query  936   LKETINEEAAE------WDR  977
             LK   NEEA        W+R
Sbjct  1167  LK-SLNEEAVKKDNSVHWER  1185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  8805  LLSYL-AQ  8785
             LL YL AQ
Sbjct  1213  LLAYLTAQ  1220


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2865  MSLTVQ  2848
             M LTVQ
Sbjct  101   MFLTVQ  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2960  LTEVIPL  2980
             L E IPL
Sbjct  158   LNELIPL  164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4123  QWQQFH  4140
             QWQ F+
Sbjct  177   QWQSFQ  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8517  EAQEEEE  8537
             EAQ +EE
Sbjct  323   EAQIQEE  329


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8379  IQSHYFL  8359
             +Q HY L
Sbjct  476   VQAHYIL  482


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  2868  CMSLTVQLSFS  2836
             C+   V LSFS
Sbjct  563   CLANKVDLSFS  573


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  584  NPLLCAS  604
            N LLC S
Sbjct  917  NSLLCPS  923


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5417  QEVSLKL  5437
             +E SLKL
Sbjct  929   EELSLKL  935


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8392  LTVGHPI  8372
             LTV HP+
Sbjct  1114  LTVTHPV  1120


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +3

Query  8832  LLHPVSLHGMDDPE  8873
             LL+ VSL     PE
Sbjct  1299  LLQQVSL-----PE  1307


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2828  VLPEKD  2845
             +LPEK+
Sbjct  1332  ILPEKE  1337


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  290  VSTPKILT  313
            V  PKI T
Sbjct  233  VTVPKIIT  240


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  234  DAGLG  248
            DAGLG
Sbjct  775  DAGLG  779


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3519  RRLSYKQF  3542
             R L YK++
Sbjct  1014  RQLNYKHY  1021


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -1

Query  5575  LDESDCSDELFVAVSAS  5525
             L+E        V VSAS
Sbjct  54    LNET-------VTVSAS  63


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  7167  RS--SDLEEE  7190
             RS   DLE E
Sbjct  71    RSLFTDLEAE  80


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4734  LDEGFH  4717
             +DE FH
Sbjct  151   MDENFH  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  2798  HPDKWTVQPIVLP  2836
             HP   TV+  VLP
Sbjct  217   HP--FTVEEFVLP  227


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8006  IRLVNG  8023
             +RLV+G
Sbjct  369   VRLVDG  374


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3974  VYNL  3963
             VYNL
Sbjct  618   VYNL  621


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2531  YNVLPQ  2548
             YN LP+
Sbjct  619   YNLLPE  624


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SST SL
Sbjct  781   SSTASL  786


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5008  LLCP  4997
             LLCP
Sbjct  919   LLCP  922


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  807  VVEEKA  824
            VVEE A
Sbjct  939  VVEESA  944


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6732  PIVTNAL  6712
             P+V NAL
Sbjct  1119  PVVRNAL  1125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  216   FPFA  205
             FPFA
Sbjct  1339  FPFA  1342


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8497  MLLVP  8511
             M LVP
Sbjct  32    MVLVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8111  IVELLGR  8131
             +VEL GR
Sbjct  332   VVELTGR  338


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2356  LGSSIRNT  2379
             LGS   NT
Sbjct  955   LGSAMQNT  962


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7457  QHLLQL  7474
             Q LLQ+
Sbjct  963   QNLLQM  968


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1680  ENSLAF  1663
             E+SL F
Sbjct  125   EDSLVF  130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7795  YVKPIP  7778
             Y KP+P
Sbjct  256   YGKPVP  261


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7489  DAPDC  7475
             DA DC
Sbjct  274   DASDC  278


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5572  DESDC  5558
             D SDC
Sbjct  274   DASDC  278


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4702  FIDITM  4719
             F++ TM
Sbjct  793   FVELTM  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8646  ELALPVPP  8623
             EL L  PP
Sbjct  930   ELSLKLPP  937


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1043  AFVLK  1047


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  5165  ELLEELKNEAV  5197
             E L  L  EAV
Sbjct  1165  EVLKSLNEEAV  1175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7819  FYIPQ  7805
             FY PQ
Sbjct  1196  FYEPQ  1200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8473  QVAIQ  8487
             QV IQ
Sbjct  1277  QVTIQ  1281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  199   VPVR  188
             VPVR
Sbjct  1437  VPVR  1440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6267  LMLVL  6253
             L+LVL
Sbjct  14    LLLVL  18


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             L SYL
Sbjct  50    LLSYL  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5853  VVLQKNCG  5876
             VV QK  G
Sbjct  205   VVVQKKSG  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5787  NISTCG  5804
             N+S CG
Sbjct  247   NVSVCG  252


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2892  GQVR  2903
             GQVR
Sbjct  367   GQVR  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  7060  RKSNVCP  7080
             RK   CP
Sbjct  684   RKPKMCP  690


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2135  ALILLVQSQ  2109
             ALI L Q Q
Sbjct  1066  ALIWLSQRQ  1074


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2939  VYIIALL  2919
             VY  ALL
Sbjct  1144  VYTKALL  1150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6116  LKPCVKL  6136
             LKP VK+
Sbjct  1392  LKPTVKM  1398


>ref|NP_001138883.1|  coiled-coil domain-containing protein 110 isoform b [Homo sapiens]
Length=796

 GENE ID: 256309 CCDC110 | coiled-coil domain containing 110 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +1

Query  4435  SKFSGLLQGQQKSTLE  4482
             SK+   LQGQ K TLE
Sbjct  476   SKYN-VLQGQNK-TLE  489


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = +2

Query  6194  SSSGRMIMEKGEIKN  6238
             S   R IME  EI N
Sbjct  614   STAARQIMER-EIEN  627


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4945  IAESEKQ  4925
             IAESE Q
Sbjct  43    IAESENQ  49


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4241  KELKKII  4261
             KE KKII
Sbjct  469   KEFKKII  475


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  2171  LTEEKIKALVE  2203
             LTE+KI  L E
Sbjct  702   LTEDKI--LLE  710


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = -1

Query  4951  FL------IAESEKQSK  4919
             FL      I E EK SK
Sbjct  363   FLVKQGSIISENEKTSK  379


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7914  YRFRPTSQP  7940
             YRF PT  P
Sbjct  164   YRFLPTAPP  172


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +3

Query  1677  FLQSRPEPTAPP  1712
             FL     PTAPP
Sbjct  166   FL-----PTAPP  172


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +2

Query  7631  QIWNHTTWMEWDREINN  7681
             QI      ME  REI N
Sbjct  619   QI------ME--REIEN  627


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1921  METKND  1938
             METK D
Sbjct  672   METKTD  677


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +3

Query  8871  EREVLEWRFDSRLAFHHVARE  8933
             ER+ LE  F+ R    H  RE
Sbjct  719   ERDTLE--FEMR----HLQRE  733


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4329  LKEKGGLG  4352
             LKEK  LG
Sbjct  559   LKEKSSLG  566


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5079  SVTKLTED  5102
             S+  LTED
Sbjct  698   SISRLTED  705


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -1

Query  295  TH------QSPPLAS  269
            TH      QS PLAS
Sbjct  766  THEDTSSPQSRPLAS  780


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9033  PQSRP  9019
             PQSRP
Sbjct  773   PQSRP  777


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  8954  LE---VLRMQ  8934
             LE    LRMQ
Sbjct  63    LESFQALRMQ  72


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4841  LHRMEEK  4861
             LH  EEK
Sbjct  102   LHSVEEK  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1125  FYKFL  1111
             FY FL
Sbjct  163   FYRFL  167


 Score = 16.8 bits (32),  Expect(2) = 14718
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5934  HQMLK  5948
             HQ+LK
Sbjct  556   HQLLK  560


 Score = 15.9 bits (30),  Expect(2) = 14718
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5806  MGVEM  5820
             M +EM
Sbjct  530   MSIEM  534


 Score = 16.3 bits (31),  Expect(2) = 17628
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8853  HGMDDPERE  8879
             H M D ER+
Sbjct  353   HEMKDKERQ  361


 Score = 15.9 bits (30),  Expect(2) = 17628
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8742  RYPLTF  8759
             RY L F
Sbjct  342   RYTLSF  347


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  615  IKDTKEALDK  644
            IK  KE L K
Sbjct  208  IKQMKEELQK  217


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3188  VKQLTEAVQK  3217
             +KQ+ E  QK
Sbjct  208   IKQMKEELQK  217


 Score = 16.8 bits (32),  Expect(2) = 21033
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +2

Query  8642  NSLPKKTRYP*SVDLP  8689
             NSLP       SV+ P
Sbjct  115   NSLPQ------SVNVP  124


 Score = 15.1 bits (28),  Expect(2) = 21033
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8517  EAQEE  8531
             E QEE
Sbjct  82    ENQEE  86


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8526  EEEEV  8540
             EE+EV
Sbjct  9     EEDEV  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1255  SALRVL  1238
             SAL VL
Sbjct  54    SALKVL  59


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6375  HRPVQRYPLS  6404
             H  V RY LS
Sbjct  337   HSRVPRYTLS  346


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  615  IKDTKEALDK  644
            I D KE L+K
Sbjct  544  IQDEKEMLEK  553


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  202  ESERET  219
            E ER+T
Sbjct  717  ENERDT  722


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2064  RFLP  2053
             RFLP
Sbjct  165   RFLP  168


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1835  IKIGGQLKEAL  1867
             IK   Q+KE L
Sbjct  208   IK---QMKEEL  215


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5700  ENIKTK  5717
             E+IK K
Sbjct  268   EDIKSK  273


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2551  MERITSNI  2574
             MER   NI
Sbjct  621   MEREIENI  628


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  5171  LEELKN---EA  5194
             L+E KN   EA
Sbjct  640   LQEIKNAKSEA  650


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6209  MIME  6220
             M+ME
Sbjct  670   MVME  673


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2928  NYVNSLE  2948
             NYV S E
Sbjct  711   NYVRSIE  717


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4658  SKTPYVCFRE  4687
             SKT Y+  RE
Sbjct  749   SKTTYISRRE  758


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4523  VIQDNSDIKV  4552
             VI D S I V
Sbjct  181   VILDKSKITV  190


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4717  MKALI  4731
             MK LI
Sbjct  422   MKPLI  426


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7616  NKSLEQ  7633
             NK LE+
Sbjct  485   NKTLEE  490


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  930  QMLKE  944
            Q+LKE
Sbjct  557  QLLKE  561


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1097  TYPSRR  1114
             TY SRR
Sbjct  752   TYISRR  757


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7042  YNLFY  7028
             YN FY
Sbjct  160   YNNFY  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7533  FRYLSTA  7513
             +R+L TA
Sbjct  164   YRFLPTA  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3829  ITVIFL  3812
             ITV FL
Sbjct  188   ITVPFL  193


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1054  LVPFR  1068
             L PFR
Sbjct  285   LLPFR  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8625  PFLLKSG  8605
             PFL K G
Sbjct  362   PFLVKQG  368


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  810  VEEK  821
            VEEK
Sbjct  447  VEEK  450


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4850  MEEKEI  4867
             +EEK I
Sbjct  488   LEEKNI  493


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  5345  SAMSTPNSEN  5316
             S M   N EN
Sbjct  518   SDMAIVNNEN  527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  1284  M-TETLLVQN  1310
             M T  LL+Q+
Sbjct  537   MKTNILLIQD  546


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             E E LE
Sbjct  547   EKEMLE  552


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8183  QELKN  8197
             QE KN
Sbjct  641   QEIKN  645


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  117  TDGHTLLEALK  85
            TD + L E LK
Sbjct  676  TDNQILKEELK  686


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2610  ENKIQ  2624
             EN IQ
Sbjct  47    ENQIQ  51


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6702  EDQGEHL  6722
             E+Q E L
Sbjct  82    ENQEENL  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4403  TKELQ  4417
             T ELQ
Sbjct  226   TNELQ  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1944  ELEVLSK  1964
             ELE L K
Sbjct  277   ELEALVK  283


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2312  KLVDFRE  2332
             KL  FRE
Sbjct  284   KLLPFRE  290


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4341  PFLLK  4327
             PFL K
Sbjct  362   PFLVK  366


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  630  EALD  641
            EALD
Sbjct  504  EALD  507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6669  TTIQE  6683
             TT QE
Sbjct  609   TTLQE  613


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  386  KNSVKARGKE  415
            KNS    GKE
Sbjct  654  KNSLSEIGKE  663


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5933  ASDAKAY  5953
             ASD K Y
Sbjct  779   ASDLKGY  785


>ref|NP_001129691.1|  low affinity immunoglobulin gamma Fc region receptor II-a isoform 
1 [Homo sapiens]
Length=317

 GENE ID: 2212 FCGR2A | Fc fragment of IgG, low affinity IIa, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  97    NDSGEYTCQT  106


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  1381  AVIISSSVAA  1352
             AV+I   VAA
Sbjct  221   AVVIATAVAA  230


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6474  PLNVLLL  6454
             PL VLLL
Sbjct  21    PLTVLLL  27


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  2830  AARKRQLD  2853
             A RKRQL+
Sbjct  268   AIRKRQLE  275


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = -1

Query  2914  PWVN--------LTC  2894
             PW+N        LTC
Sbjct  48    PWINVLQEDSVTLTC  62


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1990  RNLW  2001
             RNLW
Sbjct  14    RNLW  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  123   WLVLQ  127


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +3

Query  4128  AAISP--VLRLGPP  4163
             AA  P  VL L PP
Sbjct  35    AAAPPKAVLKLEPP  48


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  81    LIPTHTQ  87


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7922  ETIM  7911
             ETIM
Sbjct  137   ETIM  140


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 12/36 (33%), Positives = 12/36 (33%), Gaps = 21/36 (58%)
 Frame = -2

Query  8259  ITLSVPS---------------ATAMA------VAL  8215
             IT  VPS               ATA A      VAL
Sbjct  203   ITVQVPSMGSSSPMGIIVAVVIATAVAAIVAAVVAL  238


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  4135  IAAIVS-----MYC  4109
             +AAIV       YC
Sbjct  228   VAAIVAAVVALIYC  241


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 10/33 (30%)
 Frame = -1

Query  7216  FTS-PI-----VPHISSSRSEDLGLIVA--ITT  7142
             F S P+     VP   SS    +G IVA  I T
Sbjct  196   FSSKPVTITVQVPSMGSSSP--MGIIVAVVIAT  226


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  105   QTGQTSLS  112


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = +3

Query  3678  RKRSIWHGYQHTKELEEMN  3734
             RKR          +LEE N
Sbjct  270   RKR----------QLEETN  278


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  170   PTFSI  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3539  IYLAL  3553
             IYL L
Sbjct  303   IYLTL  307


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3038  VLVLLES  3018
             VL LL S
Sbjct  24    VLLLLAS  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V LTC+
Sbjct  58    VTLTCQ  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  97    NDSGE  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  114   PVHLTVL  120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T+F S P
Sbjct  194   TLFSSKP  200


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8656  EDKISLIC  8679
             ED + L C
Sbjct  55    EDSVTLTC  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  145   SWKDKPL  151


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = +3

Query  1077  GWMTNNPPIPVGE---IY  1121
             G MT NP  P  +   IY
Sbjct  287   GYMTLNPRAPTDDDKNIY  304


>ref|NP_116179.2|  calcium release-activated calcium channel protein 1 [Homo sapiens]
 sp|Q96D31.2|CRCM1_HUMAN  RecName: Full=Calcium release-activated calcium channel protein 
1; AltName: Full=Protein orai-1; AltName: Full=Transmembrane 
protein 142A
Length=301

 GENE ID: 84876 ORAI1 | ORAI calcium release-activated calcium modulator 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5827  GAPSPPPS  5804
             GAP PPPS
Sbjct  41    GAPPPPPS  48


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1385  SGSRRTR  1405
             SGSRR R
Sbjct  25    SGSRRSR  31


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = -1

Query  5389  LLAPFLA---LLCRV  5354
             LL  FLA   LLC V
Sbjct  185   LL--FLAEVVLLCWV  197


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -1

Query  5842  HPKEHGAPSPPPS  5804
             HP E   P PPPS
Sbjct  2     HP-E---PAPPPS  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3992  ILVAVH  4009
             +LVAVH
Sbjct  129   VLVAVH  134


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6099  LIISSCI  6079
             L IS CI
Sbjct  138   LMISTCI  144


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1692  PEPTAPP  1712
             PEP  PP
Sbjct  3     PEPAPPP  9


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  9059  ISSCFLP  9079
             IS C LP
Sbjct  140   ISTCILP  146


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -2

Query  8805  LLSYLAQLVLAC  8770
             LL +LA+ VL C
Sbjct  185   LL-FLAEVVLLC  195


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 10/26 (38%)
 Frame = -1

Query  8323  QALS----YSSRYVA----NSSTSSL  8270
             QALS    Y SR  A     S TS L
Sbjct  72    QALSWRKLYLSR--AKLKASSRTSAL  95


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4719  ESPHPR  4736
             ESPH R
Sbjct  162   ESPHER  167


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             P P RSS
Sbjct  7     PPPSRSS  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8394  ERMRR  8408
             ERM R
Sbjct  166   ERMHR  170


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7664  PTPSRS  7647
             P PSRS
Sbjct  7     PPPSRS  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 10/30 (33%)
 Frame = +2

Query  710  QSGQPKLPYSAEHPGANG------TSGHIT  781
            Q GQP  P S   P A G      TSG IT
Sbjct  205  QPGQPR-PTS--KPPASGAAANVSTSG-IT  230


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/27 (33%), Positives = 9/27 (33%), Gaps = 15/27 (55%)
 Frame = +3

Query  5748  RKSRRQWQ*E*RRNISTCGDGGGDGAP  5828
             R SR       RR         GDG P
Sbjct  28    RRSR-------RRS--------GDGEP  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3952  SWTTVYLS  3929
             SW   YLS
Sbjct  75    SWRKLYLS  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1452  SATIM  1466
             S TIM
Sbjct  239   STTIM  243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4305  CTAVL  4291
             CT VL
Sbjct  126   CTTVL  130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  865  KEPPH  879
            KE PH
Sbjct  161  KESPH  165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -1

Query  2305  FSTVF----FL  2285
             FSTV     FL
Sbjct  178   FSTVIGTLLFL  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2752  KTSERTS  2772
             K S RTS
Sbjct  87    KASSRTS  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1558  GALQFLA  1538
             G L FLA
Sbjct  183   GTLLFLA  189


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8121  SSTILV  8104
             S TI+V
Sbjct  239   STTIMV  244


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5835  RSMVPH  5818
             RS+V H
Sbjct  259   RSLVSH  264


>ref|NP_055390.1|  schwannomin-interacting protein 1 [Homo sapiens]
Length=487

 GENE ID: 29970 SCHIP1 | schwannomin interacting protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +2

Query  8138  WEAL-KYWWNL--LQYWSQELKN  8197
             WEAL K    L  LQ+  QE  N
Sbjct  224   WEALEK---HLAGLQFREQEVRN  243


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 10/13 (76%), Gaps = 2/13 (15%)
 Frame = +2

Query  4211  QSQGVVESMNKEL  4249
             +SQ  +ES+N EL
Sbjct  435   HSQ--IESLNEEL  445


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  511  CLQPSD  494
            CLQP D
Sbjct  203  CLQPPD  208


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4454  YRDSRNP  4474
             YRD R P
Sbjct  112   YRDDRSP  118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  6167  DLKNDTNTNSSSGR  6208
             DL  D    SSS R
Sbjct  29    DLGSDAGSSSSSSR  42


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5979  PHMP  5990
             PHMP
Sbjct  400   PHMP  403


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6152  SLKCTDLKN  6178
             SLK TDL +
Sbjct  413   SLKPTDLRD  421


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7124  LLLTRD  7141
             LLL RD
Sbjct  448   LLLIRD  453


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/19 (36%), Positives = 10/19 (52%), Gaps = 3/19 (15%)
 Frame = +2

Query  608  DRDKRHQGSFRQDRGRAKQ  664
            +RD R    +R DR  A +
Sbjct  106  ERDQR---GYRDDRSPARE  121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4353  PPIPP  4339
             PP+PP
Sbjct  217   PPVPP  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  2074  LSQQISSNYVDR  2039
             +S Q SS Y DR
Sbjct  332   MSKQ-SSSYSDR  342


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1195  CLMSRML  1175
             CLM R L
Sbjct  408   CLMKRSL  414


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8906  PSISSR  8923
             PS SSR
Sbjct  288   PSLSSR  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5293  SATTA  5307
             SATTA
Sbjct  138   SATTA  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8717  LLIRE  8703
             LLIR+
Sbjct  449   LLIRD  453


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +1

Query  3082  TEAGARPM--DISNLSR  3126
             TE  A  M  DI +L R
Sbjct  457   TEQDA--MLVDIEDLTR  471


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  9031  PVPP  9020
             PVPP
Sbjct  218   PVPP  221


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1266  QEVKN  1280
             QEV N
Sbjct  239   QEVRN  243


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8565  PLRPM  8579
             PL PM
Sbjct  328   PLSPM  332


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1517  IETLN  1503
             IE LN
Sbjct  438   IESLN  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8027  LALIWDDL  8050
             L LI D+L
Sbjct  448   LLLIRDEL  455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -1

Query  5584  IEKLDESDCSDEL  5546
             IE L+E     EL
Sbjct  438   IESLNE-----EL  445


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -3

Query  1778  LVYRLLLLR  1752
             LV  LLL R
Sbjct  445   LV-QLLLIR  452


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  152  LLVSVENL  175
            +LV +E+L
Sbjct  462  MLVDIEDL  469


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  4161  PVGGRESSR  4187
             P GGR S R
Sbjct  187   PAGGRRSGR  195


>gb|AAA36069.1|  immunoglobulin heavy chain VDJC region [Homo sapiens]
Length=150


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5464  TFYNSNWYK  5438
             T+Y S WYK
Sbjct  45    TYYRSKWYK  53


 Score = 21.0 bits (42),  Expect(2) =   450
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +3

Query  4857  KKRYSTQVD---PE  4889
             K R+S QVD   PE
Sbjct  71    KNRFSLQVDFVTPE  84


 Score = 19.3 bits (38),  Expect(2) =   450
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             W+R+SP
Sbjct  30    WIRQSP  35


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4275  SLTCPI  4258
             SLTC I
Sbjct  11    SLTCAI  16


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  751  RGKWY  765
            R KWY
Sbjct  48   RSKWY  52


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1905  ISSNTVSS  1882
             IS + VSS
Sbjct  16    ISGDSVSS  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4445  RVYYR  4459
             R YYR
Sbjct  44    RTYYR  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TIN    KN
Sbjct  64    TINSDTSKN  72


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = -1

Query  1381  AVIISSSVAAGPNAF  1337
             AV +SS    GP  F
Sbjct  115   AVTVSSASTKGPSVF  129


 Score = 15.9 bits (30),  Expect(2) = 41354
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2902  LTCPI  2888
             LTC I
Sbjct  12    LTCAI  16


 Score = 15.9 bits (30),  Expect(2) = 41354
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + PS G+E
Sbjct  33    QSPSRGLE  40


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1272  VKNWMT  1289
             VK  MT
Sbjct  59    VKSRMT  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4730  SKNKF  4744
             SKN F
Sbjct  70    SKNRF  74


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3566  LEVNIVT  3586
             L+V+ VT
Sbjct  76    LQVDFVT  82


>ref|NP_001002273.1|  low affinity immunoglobulin gamma Fc region receptor II-b isoform 
2 precursor [Homo sapiens]
Length=290

 GENE ID: 2213 FCGR2B | Fc fragment of IgG, low affinity IIb, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  105   NDSGEYTCQT  114


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  507  YSLLM  493
            YSLLM
Sbjct  272  YSLLM  276


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  64    DSVTLTCR  71


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  131   WLVLQ  135


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  217   SSSP---MGIIVAVVT  229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  229   TGIAVAAIVAAVVALIYC  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  89    LIPTHTQ  95


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +3

Query  8397  RMRR--AEPA----ADRVGA  8438
             R  R  A P     AD VGA
Sbjct  247   RKKRISANPTNPDEADKVGA  266


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  56    QWINVLQEDSVTLTC  70


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2937  NSLEEP  2954
             + LEEP
Sbjct  279   DALEEP  284


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  113   QTGQTSLS  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  229   TGIAVA  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  178   PNFSI  182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             D QNR+
Sbjct  285   DDQNRI  290


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  57    WINVLQEDSVTLTC  70


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  63    EDSVTLTCRG--TH  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  105   NDSGE  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  122   PVHLTVL  128


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5827  GAPSPP  5810
             G P PP
Sbjct  42    GTPAPP  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  153   SWKDKPL  159


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  211   ITVQAPSSSPM  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2240  KIGPEN  2257
             K+G EN
Sbjct  263   KVGAEN  268


>ref|NP_001002275.1|  low affinity immunoglobulin gamma Fc region receptor II-b isoform 
4 precursor [Homo sapiens]
Length=309

 GENE ID: 2213 FCGR2B | Fc fragment of IgG, low affinity IIb, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  105   NDSGEYTCQT  114


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  507  YSLLM  493
            YSLLM
Sbjct  291  YSLLM  295


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  64    DSVTLTCR  71


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  131   WLVLQ  135


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  217   SSSP---MGIIVAVVT  229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  229   TGIAVAAIVAAVVALIYC  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  89    LIPTHTQ  95


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  56    QWINVLQEDSVTLTC  70


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8421  ADRVGA  8438
             AD VGA
Sbjct  280   ADKVGA  285


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2937  NSLEEP  2954
             + LEEP
Sbjct  298   DALEEP  303


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  113   QTGQTSLS  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  229   TGIAVA  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  178   PNFSI  182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4477  KWISAVP  4457
             K ISA P
Sbjct  249   KRISALP  255


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             D QNR+
Sbjct  304   DDQNRI  309


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  57    WINVLQEDSVTLTC  70


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  63    EDSVTLTCRG--TH  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  105   NDSGE  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  122   PVHLTVL  128


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5827  GAPSPP  5810
             G P PP
Sbjct  42    GTPAPP  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  153   SWKDKPL  159


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  211   ITVQAPSSSPM  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2240  KIGPEN  2257
             K+G EN
Sbjct  282   KVGAEN  287


>ref|NP_001159817.1|  myoD family inhibitor domain-containing protein isoform p32 [Homo 
sapiens]
Length=246

 GENE ID: 29969 MDFIC | MyoD family inhibitor domain containing [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5537  SDEELIRT  5560
             SD ELIRT
Sbjct  66    SDGELIRT  73


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6876  GSPPEDC  6856
             GS PEDC
Sbjct  160   GSSPEDC  166


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4759  GMCTSE  4742
             G CTSE
Sbjct  193   GICTSE  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8666  ILSSLGVN  8643
             I SSL VN
Sbjct  135   IQSSLSVN  142


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  2201  EICTEME  2221
             EIC  ME
Sbjct  234   EIC--ME  238


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  535  DGCSCP  518
            D C CP
Sbjct  210  DDCNCP  215


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1773  LSAPASE  1753
             LSAP S+
Sbjct  123   LSAPVSQ  129


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7694  LSLCN  7680
             L LCN
Sbjct  180   LTLCN  184


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  968  FCSFL  954
            FC FL
Sbjct  176  FCEFL  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  3154  ICKNEGC  3174
             IC  E C
Sbjct  194   ICTSEAC  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1525  LPQL  1514
             LPQL
Sbjct  78    LPQL  81


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2487  VNAVY  2473
             VNAV+
Sbjct  151   VNAVF  155


>ref|NP_951038.1|  myoD family inhibitor domain-containing protein isoform p40 [Homo 
sapiens]
Length=355

 GENE ID: 29969 MDFIC | MyoD family inhibitor domain containing [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5537  SDEELIRT  5560
             SD ELIRT
Sbjct  175   SDGELIRT  182


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6876  GSPPEDC  6856
             GS PEDC
Sbjct  269   GSSPEDC  275


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 11/24 (45%)
 Frame = +3

Query  8997  DFPG-------RRGLGGT----GE  9035
             +FPG       R GLG T    GE
Sbjct  51    NFPGRKRRRRRRKGLGATTGGCGE  74


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +1

Query  8509  PG*KHKRRRR  8538
             PG   KRRRR
Sbjct  53    PG--RKRRRR  60


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8247  VPSATAMAVA  8218
             V  ATA AVA
Sbjct  4     VRAATAAAVA  13


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4759  GMCTSE  4742
             G CTSE
Sbjct  302   GICTSE  307


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8666  ILSSLGVN  8643
             I SSL VN
Sbjct  244   IQSSLSVN  251


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  2201  EICTEME  2221
             EIC  ME
Sbjct  343   EIC--ME  347


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8219  ATAIAVA  8239
             ATA AVA
Sbjct  7     ATAAAVA  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  535  DGCSCP  518
            D C CP
Sbjct  319  DDCNCP  324


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8527  RRRR  8538
             RRRR
Sbjct  58    RRRR  61


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  332  SPSSLR  315
            SPSS R
Sbjct  85   SPSSVR  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1773  LSAPASE  1753
             LSAP S+
Sbjct  232   LSAPVSQ  238


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7694  LSLCN  7680
             L LCN
Sbjct  289   LTLCN  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  968  FCSFL  954
            FC FL
Sbjct  285  FCEFL  289


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  3154  ICKNEGC  3174
             IC  E C
Sbjct  303   ICTSEAC  309


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  4364  LHCTPQSP  4341
             LH  P+SP
Sbjct  79    LHPAPHSP  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5358  RQRRARNGA  5384
             R RR R GA
Sbjct  95    RARRQRRGA  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1525  LPQL  1514
             LPQL
Sbjct  187   LPQL  190


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2487  VNAVY  2473
             VNAV+
Sbjct  260   VNAVF  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +3

Query  5748  RKSRRQWQ*E*RR  5786
             RK RR      RR
Sbjct  55    RKRRR------RR  61


>pdb|1YPO|A  Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|B  Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|C  Chain C, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|D  Chain D, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|E  Chain E, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|F  Chain F, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|G  Chain G, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
 pdb|1YPO|H  Chain H, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
P3 1 21 Space Group
Length=132


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 11/31 (35%)
 Frame = -1

Query  7525  SFH---SQDSCLELLDAPDCELQQMLLRLNS  7442
             SF    SQ+ CL  LDA        LL  NS
Sbjct  22    SFNWEKSQEKCLS-LDA-------KLLKINS  44


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8323  QALSYSS  8303
             QA SYSS
Sbjct  53    QAISYSS  59


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  717  VSQNYP  734
            VSQ YP
Sbjct  94   VSQTYP  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6535  INSTA  6549
             INSTA
Sbjct  42    INSTA  46


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1321  SGFAFW  1304
             S F FW
Sbjct  58    SSFPFW  63


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2832  CQKK  2843
             CQKK
Sbjct  124   CQKK  127


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2560  SFPSLW  2543
             S+P LW
Sbjct  72    SYPWLW  77


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  6938  LFNSTWFNSTW  6970
             LF S  FN  W
Sbjct  17    LFSSGSFN--W  25


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2897  SQIYP  2911
             SQ YP
Sbjct  95    SQTYP  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7210  SPIVPH  7193
             SP  PH
Sbjct  81    SPLMPH  86


>pdb|1YPQ|A  Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
Dioxane Complex
 pdb|1YPQ|B  Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
Dioxane Complex
 pdb|1YPU|A  Chain A, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
C2 Space Group
 pdb|1YPU|B  Chain B, Human Oxidized Low Density Lipoprotein Receptor Lox-1 
C2 Space Group
Length=135


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 11/31 (35%)
 Frame = -1

Query  7525  SFH---SQDSCLELLDAPDCELQQMLLRLNS  7442
             SF    SQ+ CL  LDA        LL  NS
Sbjct  27    SFNWEKSQEKCLS-LDA-------KLLKINS  49


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8323  QALSYSS  8303
             QA SYSS
Sbjct  58    QAISYSS  64


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  717  VSQNYP  734
            VSQ YP
Sbjct  99   VSQTYP  104


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6535  INSTA  6549
             INSTA
Sbjct  47    INSTA  51


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1321  SGFAFW  1304
             S F FW
Sbjct  63    SSFPFW  68


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2832  CQKK  2843
             CQKK
Sbjct  129   CQKK  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2560  SFPSLW  2543
             S+P LW
Sbjct  77    SYPWLW  82


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  6938  LFNSTWFNSTW  6970
             LF S  FN  W
Sbjct  22    LFSSGSFN--W  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2897  SQIYP  2911
             SQ YP
Sbjct  100   SQTYP  104


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7210  SPIVPH  7193
             SP  PH
Sbjct  86    SPLMPH  91


>pdb|2R0K|A  Chain A, Protease Domain Of Hgfa With Inhibitor Fab58
Length=283


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2816  VQPIVLPE  2839
             VQPI LPE
Sbjct  145   VQPICLPE  152


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1439  AHCFSQ  1422
             AHCFS+
Sbjct  74    AHCFSH  79


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3282  SFCMGSL  3262
             SFC GSL
Sbjct  58    SFCAGSL  64


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4917  YFDC  4928
             YFDC
Sbjct  214   YFDC  217


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  8467  APCFSRS--RD  8441
             A CFS S  RD
Sbjct  74    AHCFSHSPPRD  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5221  PWLRATY  5241
             PWL A Y
Sbjct  48    PWLAAIY  54


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7072  HCFS  7061
             HCFS
Sbjct  75    HCFS  78


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2053  NYVD  2042
             NYVD
Sbjct  264   NYVD  267


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 9/16 (56%)
 Frame = +1

Query  16   TRS---------EPGS  36
            TRS         EPGS
Sbjct  140  TRSQFVQPICLPEPGS  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 9/16 (56%)
 Frame = +2

Query  9101  TRS---------EPGS  9121
             TRS         EPGS
Sbjct  140   TRSQFVQPICLPEPGS  155


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7806  SQFV  7795
             SQFV
Sbjct  142   SQFV  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2451  GTEKY  2437
             G EKY
Sbjct  106   GIEKY  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3355  SLSEIMVP  3378
             SL E +VP
Sbjct  181   SLREALVP  188


>pdb|1UJ3|C  Chain C, Crystal Structure Of A Humanized Fab Fragment Of Anti- 
Tissue-Factor Antibody In Complex With Tissue Factor
Length=205


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -3

Query  2399  FLTLRDVVF---LI  2367
             FL LRD VF   LI
Sbjct  135   FLSLRD-VFGKDLI  147


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  165  WKISSSG---ARTGT  200
            WK SSSG   A T T
Sbjct  153  WKSSSSGKKTAKTNT  167


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1797  SLRSLFGND  1823
             SLR  FG D
Sbjct  137   SLRDVFGKD  145


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2211  VQIST  2197
             VQIST
Sbjct  31    VQIST  35


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  1624  CLSVQSFIWCPS  1589
             C SVQ  I  PS
Sbjct  181   CFSVQAVI--PS  190


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1283  DDRNLV  1300
             D+R LV
Sbjct  124   DERTLV  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4551  TFMSL  4537
             TF+SL
Sbjct  134   TFLSL  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  4033  CFY  4025
             CFY
Sbjct  44    CFY  46


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1576  GNVE  1587
             GNVE
Sbjct  76    GNVE  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3661  RAVNKK  3678
             R VN K
Sbjct  191   RTVNRK  196


>ref|NP_112192.2|  protein unc-93 homolog B1 [Homo sapiens]
Length=597

 GENE ID: 81622 UNC93B1 | unc-93 homolog B1 (C. elegans) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4805  YRRKRL  4822
             YRRKRL
Sbjct  53    YRRKRL  58


 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 6/25 (24%)
 Frame = -1

Query  6283  FLHLTSYACADIERAVFYLSFL-HY  6212
             F HL S+ACA       Y  FL HY
Sbjct  227   FFHL-SFACAQL--PMIY--FLNHY  246


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  9070  LFACTG  9087
             LFACTG
Sbjct  355   LFACTG  360


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = -3

Query  5129  LGLLGL-----VP  5106
             LGLLGL     VP
Sbjct  392   LGLLGLWLPRPVP  404


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +1

Query  5758  EDSGNES--EGE  5787
             ED  +ES  EGE
Sbjct  544   EDNSDESDAEGE  555


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  3742  IY-LFISSN  3719
             IY LF+S N
Sbjct  145   IYALFVSTN  153


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7563  QPQIPR  7546
             QP IPR
Sbjct  526   QPRIPR  531


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 25/46 (54%)
 Frame = -3

Query  3815  SHVHLGPYL----------FHLKIVLS*F---QH*L--IYLLVHFL  3723
             SH    PYL          FHL    S F   Q  L  IY L H+L
Sbjct  212   SHA---PYLLVFQAIFYSFFHL----S-FACAQ--LPMIYFLNHYL  247


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8491  LPMLLV  8508
             L MLLV
Sbjct  298   LAMLLV  303


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -2

Query  2307  HLVLSF--FF  2284
             HL L F  FF
Sbjct  412   HLLLTFILFF  421


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3554  AKLDKLLVT  3528
             AKL  LLVT
Sbjct  495   AKLAVLLVT  503


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3902  IYHSW  3888
             IYH W
Sbjct  473   IYHWW  477


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4847  RMEEK  4861
             RME+K
Sbjct  513   RMEQK  517


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 10/20 (50%)
 Frame = -1

Query  7471  LQQMLLRLNSPQQIVLLLHY  7412
             L QM        Q  L LHY
Sbjct  81    LLQM--------Q--LILHY  90


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -3

Query  5141  PS-VALGLLGLVP  5106
             PS VALG +  VP
Sbjct  163   PSAVALG-MAIVP  174


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3116  IYQEPFK  3136
             I+Q PFK
Sbjct  327   IFQLPFK  333


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3749  LIYLLV  3732
             L YLLV
Sbjct  375   LAYLLV  380


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1164  TFLLFY  1147
             TF LF+
Sbjct  416   TFILFF  421


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5107  GTSPRRPR  5130
             G  PR PR
Sbjct  521   GVAPRQPR  528


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  1347  GPAATLEEM  1373
             GP A L+E+
Sbjct  28    GPEAPLDEL  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1128  IFYKF  1114
             IFY F
Sbjct  223   IFYSF  227


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  1975  ILSYFDKT  1952
             ILS F+KT
Sbjct  267   ILSGFNKT  274


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -1

Query  5389  LLA-PFLALL  5363
             L+A  FLA+L
Sbjct  292   LMAVAFLAML  301


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6097  DYILMHL  6077
             DY L HL
Sbjct  337   DYRLRHL  343


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  420  YKLKHIV  440
            Y L H V
Sbjct  338  YRLRHLV  344


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7978  FFFYS  7964
             FF YS
Sbjct  346   FFIYS  350


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  7733  FLAGFAILQLRSVLSLC  7683
             FLA    L L  VL LC
Sbjct  297   FLA---ML-L--VLGLC  307


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5502  LRHL  5513
             LRHL
Sbjct  340   LRHL  343


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9127  QRAPR  9113
             QR PR
Sbjct  206   QRPPR  210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  42   QRAPR  28
            QR PR
Sbjct  206  QRPPR  210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5908  GSNHHSIL  5931
             G N H IL
Sbjct  261   GTNSHGIL  268


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4796  GSAYR  4810
             G AYR
Sbjct  308   GAAYR  312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             EE+  RSV
Sbjct  315   EEIDLRSV  322


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2439  IFQFP  2453
             IFQ P
Sbjct  327   IFQLP  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7773  VCGIGL  7790
             VC +GL
Sbjct  367   VCSVGL  372


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5180  APLKALV  5160
             APL  LV
Sbjct  31    APLDELV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1186  SRMLVG  1169
             S ML G
Sbjct  109   SKMLMG  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  5840  MLM  5848
             MLM
Sbjct  111   MLM  113


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  4817  SFSCMQTP  4794
             SF C Q P
Sbjct  231   SFACAQLP  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2469  GSILHLPY  2492
             G I +LP+
Sbjct  325   GNIFQLPF  332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  285  RRPSP  271
            RRP P
Sbjct  580  RRPCP  584


>pdb|1PN5|A  Chain A, Nmr Structure Of The Nalp1 Pyrin Domain (Pyd)
Length=159


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +2

Query  8027  LAL-IWDD--LRSLC  8062
             LAL  W+   LRSLC
Sbjct  127   LALHTWEQMGLRSLC  141


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3098  GQWTY  3112
             G+WTY
Sbjct  41    GEWTY  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +1

Query  8419  QQIGWEQHLETWKNM  8463
             +Q  W+  L TW  M
Sbjct  121   EQRAWDLALHTWEQM  135


>pdb|1OQE|K  Chain K, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|L  Chain L, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|M  Chain M, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|N  Chain N, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|O  Chain O, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|P  Chain P, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|Q  Chain Q, Crystal Structure Of Stall-1 With Baff-R
 pdb|1OQE|R  Chain R, Crystal Structure Of Stall-1 With Baff-R
Length=31

 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8141  PTPCVP  8124
             PTPCVP
Sbjct  1     PTPCVP  6


>pdb|1OSX|A  Chain A, Solution Structure Of The Extracellular Domain Of Blys 
Receptor 3 (Br3)
Length=61


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8141  PTPCVP  8124
             PTPCVP
Sbjct  16    PTPCVP  21


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6862  LRRGPR  6879
             +RRGPR
Sbjct  1     MRRGPR  6


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  8452  RSRDA-APT  8429
             R RDA APT
Sbjct  9     RGRDAPAPT  17


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  5839  PKEHGAPSPPP  5807
             PK  GA SP P
Sbjct  43    PKPAGASSPAP  53


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6438  KPAGA  6424
             KPAGA
Sbjct  44    KPAGA  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  9049  LRARHSPVP  9023
             LR R  P P
Sbjct  8     LRGRDAPAP  16


>ref|NP_075052.1|  leucine-rich repeat-containing protein 19 precursor [Homo sapiens]
Length=370

 GENE ID: 64922 LRRC19 | leucine rich repeat containing 19 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +2

Query  7775  LWN----WFNITNWL  7807
             LWN     FN  NWL
Sbjct  177   LWNCSCSLFNLQNWL  191


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  921  LDVPPL  904
            LDVPPL
Sbjct  160  LDVPPL  165


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2952  VPLRSL  2935
             VPLRSL
Sbjct  142   VPLRSL  147


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5306  LFIHFQ  5323
             L+IHFQ
Sbjct  238   LYIHFQ  243


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2402  KKSVTVLD  2425
             KK VT+LD
Sbjct  46    KKDVTILD  53


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  6769  NVTMCLSHISY  6737
             N+TMC    SY
Sbjct  202   NITMC----SY  208


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             LISYL
Sbjct  156   LISYL  160


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = +3

Query  1116  IYKRWII-----LGLNK  1151
             IY   +I     LGLNK
Sbjct  109   IY---VIQQGAFLGLNK  122


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7620  NLWN  7631
             NLWN
Sbjct  176   NLWN  179


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8960  LTSSLL  8977
             LT SLL
Sbjct  281   LTTSLL  286


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 6/24 (25%)
 Frame = +3

Query  8514  LEAQEEE--EVGFPVTP----QVP  8567
             LE +E E  E GF   P    Q+P
Sbjct  308   LEEHEAETYEDGFTGNPSSLSQIP  331


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 8/21 (38%)
 Frame = -2

Query  5880  VT--HN--F---SVALQIINI  5839
             VT  HN  F   S  L+I NI
Sbjct  85    VTILHNNGFGNLS-SLEILNI  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 7/17 (41%)
 Frame = +1

Query  4063  NSIFSFKISRKMASKNN  4113
             NSIF         S NN
Sbjct  247   NSIFN-------SSSNN  256


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +1

Query  4987  NIKQDITR*DL-YN  5025
             +IK D+T  DL YN
Sbjct  44    DIKKDVTILDLSYN  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8474  CDCSMF  8457
             C CS+F
Sbjct  180   CSCSLF  185


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 10/21 (47%)
 Frame = +3

Query  7512  WLWKDT*RINSSWGFGVALEN  7574
             WL       N S    V LEN
Sbjct  190   WL-------NTS---NVTLEN  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6916  KFPSTI  6899
             KFPS +
Sbjct  229   KFPSSV  234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3576  FTSNPES  3556
             FT NP S
Sbjct  320   FTGNPSS  326


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2604  LLENKI  2621
             L ENK+
Sbjct  80    LIENKV  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2696  KIEEL  2710
             KIE+L
Sbjct  132   KIEQL  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -2

Query  651  PLSCLKLPWCLLSL  610
            PL  LK    LL L
Sbjct  143  PLRSLK----LLNL  152


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  4535  NS----DIKVVPRRKA  4570
             NS    +IK VP  KA
Sbjct  210   NSLQSYNIKTVP-HKA  224


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -2

Query  528  VAVPVFVYSLLMF  490
            V V V   SLL F
Sbjct  276  VVVTVLTTSLLIF  288


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4584  SLMIF  4570
             SL+IF
Sbjct  284   SLLIF  288


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6984  QITL  6995
             QITL
Sbjct  58    QITL  61


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6842  TIIFKQ  6859
             T+IF Q
Sbjct  339   TVIFEQ  344


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3252  LLNL  3263
             LLNL
Sbjct  149   LLNL  152


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8805  LLSYL  8791
             L SYL
Sbjct  156   LISYL  160


>ref|NP_005807.1|  T-cell surface protein tactile isoform 2 precursor [Homo sapiens]
Length=569

 GENE ID: 10225 CD96 | CD96 molecule [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -2

Query  3600  AY---CES-VTMFTSNPE  3559
             AY   CES VT FT  PE
Sbjct  80    AYGRPCESLVT-FTETPE  96


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2908  VNLTCPIQ  2885
             VNLTC  Q
Sbjct  41    VNLTCQTQ  48


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  7724  GFAILQLRSVL  7692
             GF  L+L SVL
Sbjct  313   GF--LELKSVL  321


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  162  VWKISS  179
            VW ISS
Sbjct  350  VWNISS  355


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  4306  LYCCLKMFSL  4277
             L+CC+ +F L
Sbjct  513   LFCCMILFGL  522


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  2462  LHLRELKNM  2436
             LHLR   NM
Sbjct  103   LHLR---NM  108


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             + LTIW
Sbjct  333   DNLTIW  338


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4623  LATQSSPA  4600
             L TQ SPA
Sbjct  380   LDTQPSPA  387


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = -1

Query  6736  FSYCNKCSPWSSLDTD  6689
             F Y     PW S  TD
Sbjct  427   FNY-----PWTSSGTD  437


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6039  VTFTNT  6022
             VTFT T
Sbjct  89    VTFTET  94


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  844  PCFQ  855
            PCFQ
Sbjct  162  PCFQ  165


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = -3

Query  7223  YI--IHF  7209
             YI  IHF
Sbjct  12    YIIQIHF  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2573  FQSSMTKI  2596
             FQ S  KI
Sbjct  164   FQNSSSKI  171


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3205  GSAKNNH  3225
             GS K NH
Sbjct  482   GSTKTNH  488


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  137  EIPQTL  154
            EI QTL
Sbjct  154  EINQTL  159


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +2

Query  1667  AREFSSEQTRANSPT  1711
             AR FS   T AN  T
Sbjct  470   ARAFSEVPTTANGST  484


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  6900  IVEGNFST  6923
             IVE N ST
Sbjct  258   IVENN-ST  264


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8274  PCTTSITL  8251
             P T S+TL
Sbjct  396   PATSSVTL  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2408  SVTVLDV  2428
             SVT  DV
Sbjct  400   SVTLVDV  406


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5301  CCRIL  5287
             CC IL
Sbjct  515   CCMIL  519


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  379  DGKKF  393
            DG KF
Sbjct  225  DGRKF  229


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9112  LRSGLTR  9092
             L S LTR
Sbjct  317   LKSVLTR  323


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  27   LRSGLTR  7
            L S LTR
Sbjct  317  LKSVLTR  323


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4368  SPALYP  4351
             SPA YP
Sbjct  391   SPARYP  396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  852  SALSEGATPQ  881
            SAL    TPQ
Sbjct  407  SALRPNTTPQ  416


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  1905  ISSNTVSSAP  1876
             I S T SS P
Sbjct  445   IPSETYSSSP  454


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  543   PPPPP  547


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2344  SLIKFSE  2324
             SL+ F E
Sbjct  87    SLVTFTE  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  4320  STILKEKGGLG  4352
             ST LK+   LG
Sbjct  200   STLLKDRVKLG  210


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4566  FLLG  4555
             FLLG
Sbjct  360   FLLG  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5033  TSSINNTKK  5059
             TSS  +TKK
Sbjct  432   TSSGTDTKK  440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2188  KSISR  2202
             KS+SR
Sbjct  440   KSVSR  444


>pdb|1FYT|E  Chain E, Crystal Structure Of A Complex Of A Human AlphaBETA-T 
Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class 
Ii Molecule, Hla-Dr1
Length=245


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  110  VVEDLNKVFPPEV  122


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  66    REKKE  70


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5968  MYLC  5957
             MYLC
Sbjct  86    MYLC  89


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  162   EVHSG------VSTDPQP  173


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  214   LSENDEWT  221


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  63    SVSRE  67


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  110   VVEDLNK  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  128   SEAEIS  133


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = +2

Query  6206  RMI-------M-EKGEI  6232
             R+I       M EKG+I
Sbjct  42    RLIYFSYDVKMKEKGDI  58


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  234  DAGLGL  251
            D GLGL
Sbjct  36   DPGLGL  41


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  5012  RISTILGTSSINNT  5053
             R S IL   S N T
Sbjct  71    RFSLILESASTNQT  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7103  CSSNITGL  7126
             C S  TGL
Sbjct  89    CASSSTGL  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS Y L
Sbjct  182   DSRYSL  187


>sp|P31995.1|FCG2C_HUMAN  RecName: Full=Low affinity immunoglobulin gamma Fc region receptor 
II-c; Short=IgG Fc receptor II-c; AltName: Full=Fc-gamma 
RII-c; Short=Fc-gamma-RIIc; Short=FcRII-c; AltName: Full=CDw32; 
AltName: CD_antigen=CD32; Flags: Precursor
Length=323

 GENE ID: 9103 FCGR2C | Fc fragment of IgG, low affinity IIc, receptor for
(CD32) (gene/pseudogene) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  106   NDSGEYTCQT  115


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  65    DSVTLTCR  72


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  132   WLVLQ  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  218   SSSP---MGIIVAVVT  230


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  230   TGIAVAAIVAAVVALIYC  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  90    LIPTHTQ  96


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  57    QWINVLQEDSVTLTC  71


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  114   QTGQTSLS  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  230   TGIAVA  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  179   PNFSI  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3539  IYLAL  3553
             IYL L
Sbjct  309   IYLTL  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  58    WINVLQEDSVTLTC  71


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  64    EDSVTLTCRG--TH  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  106   NDSGE  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  123   PVHLTVL  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             P APP
Sbjct  44    PAAPP  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  154   SWKDKPL  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  212   ITVQAPSSSPM  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = +3

Query  1077  GWMTNNPPIPVGE---IY  1121
             G MT NP  P  +   IY
Sbjct  293   GYMTLNPRAPTDDDKNIY  310


>ref|NP_000897.3|  atrial natriuretic peptide receptor 1 precursor [Homo sapiens]
Length=1061

 GENE ID: 4881 NPR1 | natriuretic peptide receptor A/guanylate cyclase A
(atrionatriuretic peptide receptor A) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  1766  LLLLRGS  1746
             LLLLRGS
Sbjct  24    LLLLRGS  30


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  965  CSFLIDGLF  939
            C FL++GLF
Sbjct  196  CFFLVEGLF  204


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +3

Query  849  FSALSEGATPQDLNTMLN  902
            F ALS   TP    T+LN
Sbjct  885  FTALSAESTPMQVVTLLN  902


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +2

Query  4244  ELKKIIGQVRD-QAEHL  4291
             ELK    + RD Q EHL
Sbjct  583   ELK----HMRDVQNEHL  595


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 9/21 (42%)
 Frame = +2

Query  3764  RKVLF-L----DGIDKAQDEH  3811
             RKVLF L    D     Q+EH
Sbjct  578   RKVLFELKHMRD----VQNEH  594


 Score = 18.5 bits (36),  Expect(2) =  2309
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = -1

Query  4363  CTVPPN--PPFSFKIVDEYC  4310
             CT PPN        I  EYC
Sbjct  602   CTDPPNIC------ILTEYC  615


 Score = 18.0 bits (35),  Expect(2) =  2309
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4225  YSLTLGIV  4202
             YSLT  IV
Sbjct  637   YSLTNDIV  644


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -1

Query  1552  LQFLAVCPSLPQLKHL  1505
             L+FL       QLKHL
Sbjct  323   LEFL------KQLKHL  332


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  6648  STDVFSCTIMVLAL  6607
             S D F  T M LAL
Sbjct  247   SPDAFR-TLMLLAL  259


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2931  YVNSLEE  2951
             Y N LEE
Sbjct  823   YANNLEE  829


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4280  PDLLP  4266
             PDLLP
Sbjct  70    PDLLP  74


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  6284  EYAFFYKLDI  6313
             +Y FF  LDI
Sbjct  267   DYVFFH-LDI  275


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -2

Query  990  ALDALYPILQLPH  952
            AL  LY I  LPH
Sbjct  847  AL--LYQI--LPH  855


 Score = 17.6 bits (34),  Expect(2) =  9128
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5107  GTSPRRP  5127
             G  PRRP
Sbjct  285   GPAPRRP  291


 Score = 15.9 bits (30),  Expect(2) =  9128
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5162  LELLEELK  5185
             LE L +LK
Sbjct  323   LEFLKQLK  330


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -2

Query  2898  LA--QFNF  2881
             LA  QFNF
Sbjct  332   LAYEQFNF  339


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1968  DSMIRYS  1988
             D M RYS
Sbjct  632   DWMFRYS  638


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1645  SGLPTREG  1668
             SGLP R G
Sbjct  931   SGLPVRNG  938


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             R YWL
Sbjct  1047  RTYWL  1051


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8537  LLLLL  8523
             LLLLL
Sbjct  14    LLLLL  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +3

Query  3513  QIRRLSYKQF  3542
             Q   L Y QF
Sbjct  328   QLKHLAYEQF  337


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3047  TLHVLVLLESL  3015
             TL VL L  SL
Sbjct  471   TLEVLALVGSL  481


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  2591  KI----LEPFRKQNPD  2626
             KI    LE FR  +P+
Sbjct  675   KITDYGLESFRDLDPE  690


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  7441  PQQIVLLLH--YT  7409
             P Q+V LL   YT
Sbjct  894   PMQVVTLLNDLYT  906


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6822  SLNLLAI  6802
             SL LL I
Sbjct  480   SLSLLGI  486


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7501  LELLDA  7484
             L LLDA
Sbjct  950   LALLDA  955


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8078  RLRDLLL  8098
             RLR LLL
Sbjct  11    RLRLLLL  17


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5389  LLAPFLALL  5363
             LL P L LL
Sbjct  19    LLPPLLLLL  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7790  NITNWLW  7810
             NIT  +W
Sbjct  379   NITQRMW  385


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8951  EVLRM  8937
             E LRM
Sbjct  705   ELLRM  709


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6821  EQFGNN  6838
             EQ+ NN
Sbjct  821   EQYANN  826


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8047  SAEPVPLQ  8070
             SAE  P+Q
Sbjct  889   SAESTPMQ  896


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2426  VGDAY  2440
             +GDAY
Sbjct  923   IGDAY  927


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3274  YGQFKF  3257
             Y QF F
Sbjct  334   YEQFNF  339


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1118  NFSYWD  1101
             +FS WD
Sbjct  407   DFSLWD  412


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1342  AFKIVL  1325
             AF +VL
Sbjct  419   AFRVVL  424


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  771  AISPRTLNAW  800
            A+S R LN W
Sbjct  435  AVSGRKLN-W  443


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4655  FSKTPY  4672
             F KT Y
Sbjct  553   FAKTAY  558


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4623  VDRMRI  4640
             V+R RI
Sbjct  569   VNRKRI  574


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 8/20 (40%)
 Frame = +2

Query  1859  EAL---L--DTGADDTVLEE  1903
             EAL   L  +T A   VLEE
Sbjct  1010  EALKIHLSSETKA---VLEE  1026


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  375  LILPRLIL  352
            L LP L L
Sbjct  18   LLLPPLLL  25


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  5147  VAPSVALGL  5121
             V P V L L
Sbjct  55    VGPAVELAL  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  1643  DLAFLQGKAR  1672
             +LA  Q KAR
Sbjct  60    ELALAQVKAR  69


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2851  PAVF  2840
             PAVF
Sbjct  110   PAVF  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9171  RQALL  9157
             RQAL+
Sbjct  180   RQALM  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  86   RQALL  72
            RQAL+
Sbjct  180  RQALM  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8755  VSGYL  8741
             V GYL
Sbjct  392   VTGYL  396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7174  EDLGL  7160
             E+LGL
Sbjct  774   EELGL  778


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  830  AESLLF  813
            AE LL+
Sbjct  845  AEALLY  850


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +3

Query  5943  LKHMIQRYIMFG  5978
             LK M  RY +FG
Sbjct  987   LK-M-PRYCLFG  996


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1382  MSGSRR  1399
             M G RR
Sbjct  1     MPGPRR  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             L L+L L L
Sbjct  12    LRLLLLLLL  20


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -3

Query  3077  LLLSLLMGHNTLHVLVLL  3024
             LLL LL     L  L LL
Sbjct  14    LLLLLL-----LPPLLLL  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6097  DYILMHL  6077
             DY+  HL
Sbjct  267   DYVFFHL  273


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6396  DTFGQ  6382
             D FGQ
Sbjct  274   DIFGQ  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  952  MRKLQN  969
            MR  QN
Sbjct  587  MRDVQN  592


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8928  RELHPE  8945
             R+L PE
Sbjct  685   RDLDPE  690


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8204  VSLLN  8218
             V LLN
Sbjct  898   VTLLN  902


>ref|NP_647611.1|  megakaryocyte-associated tyrosine-protein kinase isoform c [Homo 
sapiens]
Length=466

 GENE ID: 4145 MATK | megakaryocyte-associated tyrosine kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  749  DVLHYRV  729
            DV HYRV
Sbjct  124  DVIHYRV  130


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  7896  GRDIHHYR  7919
             GRD+ HYR
Sbjct  122   GRDVIHYR  129


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  2328  ENLIRELKTSG  2360
             E L REL   G
Sbjct  435   EKLARELRSAG  445


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3276  KRKHG  3290
             KRKHG
Sbjct  170   KRKHG  174


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2249  AQFLKFSL  2226
             AQ L FSL
Sbjct  286   AQLLQFSL  293


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  6900  IVEGNFSTVIQ  6932
             I EG F  V Q
Sbjct  200   IGEGEFGAVLQ  210


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3191  KQLTEAVQK  3217
             K+  EAV+K
Sbjct  390   KEVSEAVEK  398


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1601  LVSFLST  1581
             LV FL T
Sbjct  271   LVNFLRT  277


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8473  QVAIQQL  8493
             Q A+QQL
Sbjct  89    QEAVQQL  95


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3450  NLVSLL  3433
             NLV LL
Sbjct  246   NLVRLL  251


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  943  RPSMRKL  963
            RP  RKL
Sbjct  427  RPPFRKL  433


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5291  ILQQLLFI  5314
             IL+Q L+I
Sbjct  254   ILHQGLYI  261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PPE C
Sbjct  404   PPEGC  408


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1746  TPPQKQEP  1769
             T P  QEP
Sbjct  459   TSPRSQEP  466


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4803  ADPNMLLLP  4777
             ADP + L+P
Sbjct  72    ADPKLSLMP  80


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7517  VERYLKD  7537
             VE Y KD
Sbjct  152   VEHYSKD  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3737  LVHFL  3723
             LV FL
Sbjct  271   LVNFL  275


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2592  FVMLLW  2575
             F  LLW
Sbjct  369   FGVLLW  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6993  LKEVTQ  7010
             LKEV +
Sbjct  389   LKEVSE  394


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8871  EREVL  8885
             ERE L
Sbjct  66    EREAL  70


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3252  LLNL  3263
             LLNL
Sbjct  188   LLNL  191


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5019  LQYLALAA  5042
             LQ L L A
Sbjct  191   LQHLTLGA  198


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  6140  GLILHMAL  6117
             G ILH  L
Sbjct  252   GVILHQGL  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3836  AMASDFNL  3859
             A  SDF L
Sbjct  325   AKVSDFGL  332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8925  AREL  8936
             AREL
Sbjct  438   AREL  441


>emb|CAD32734.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=128


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = -1

Query  3907  LTFITAGYYFFCYY  3866
             LT    GYYF+ YY
Sbjct  106   LT----GYYFY-YY  114


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +2

Query  2879  GK-LNWASQIYPG  2914
             GK L W S IY G
Sbjct  42    GKGLEWVSVIYSG  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G +TFY D
Sbjct  54    GGDTFYAD  61


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4030  FYISTGYM  4007
             F +ST YM
Sbjct  27    FSVSTNYM  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6422  CAPAGFAI  6445
             CA  GF +
Sbjct  22    CAASGFSV  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4850  FYGDS  4836
             FY DS
Sbjct  58    FYADS  62


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1203  KEPFRDY  1223
             KE  RDY
Sbjct  97    KEAGRDY  103


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  68    TISRDHSKN  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  85    LRAE  88


>emb|CAB51710.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=131


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  818  LFYYFY  801
            LFYY+Y
Sbjct  107  LFYYYY  112


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  5885  YYGVPVWKEATT  5920
             YYG  VW + TT
Sbjct  111   YYGMDVWGQGTT  122


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -1

Query  6649  FYRCVQLYYYG  6617
             FY     YYYG
Sbjct  108   FY-----YYYG  113


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +1

Query  8332  FAIRWV--ASGQ  8361
             +AI WV  A GQ
Sbjct  32    YAISWVRQAPGQ  43


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = -1

Query  4549  FYVTIILYYY  4520
             FY     YYY
Sbjct  108   FY-----YYY  112


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  83    LSSLRS  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  7282  SGAERKK--SS  7308
             SGAE KK  SS
Sbjct  7     SGAEVKKPGSS  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2232  FPSFSIS  2212
             F S+ IS
Sbjct  29    FSSYAIS  35


>sp|O75015.2|FCG3B_HUMAN  RecName: Full=Low affinity immunoglobulin gamma Fc region receptor 
III-B; AltName: Full=IgG Fc receptor III-1; AltName: Full=Fc-gamma 
RIII-beta; Short=Fc-gamma RIIIb; Short=Fc-gamma 
RIII; Short=FcRIIIb; Short=FcRIII; AltName: Full=FcR-10; AltName: 
CD_antigen=CD16b; Flags: Precursor
Length=233

 GENE ID: 2215 FCGR3B | Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  82    NDSGEYRCQT  91


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +2

Query  3746  LVSAGIR-----K-VLFLD  3784
             LVSAG R     K V FL+
Sbjct  13    LVSAGMRTEDLPKAVVFLE  31


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 10/25 (40%)
 Frame = -2

Query  6885  TISG-SPPED------CLKIIVLLF  6832
             TIS  SPP        CL + VLLF
Sbjct  198   TISSFSPP--GYQVSFCL-VMVLLF  219


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  879  VGWLLL  862
            +GWLLL
Sbjct  106  IGWLLL  111


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  8536  RWVFQS----HLR  8562
             RWVF      HLR
Sbjct  115   RWVFKEEDPIHLR  127


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3288  HVSFCM  3271
             +VSFC+
Sbjct  208   QVSFCL  213


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2135  ALILLV  2118
             AL LLV
Sbjct  9     ALLLLV  14


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             W+ LQA
Sbjct  108   WLLLQA  113


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2514  QGLDIST  2534
             QGL +ST
Sbjct  192   QGLAVST  198


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4323  WMNTA  4309
             W NTA
Sbjct  131   WKNTA  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  6032  LP--ILLLV  6012
             LP   LLLV
Sbjct  6     LPTALLLLV  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +3

Query  6681  EKESV--------SRED  6707
             EK+SV        S ED
Sbjct  39    EKDSVTLKCQGAYSPED  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6149  VSLKC  6163
             V LKC
Sbjct  43    VTLKC  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  7659  SGTEKLTITQ  7688
             S T   TITQ
Sbjct  183   SETVNITITQ  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2373  EYHIP  2387
             ++HIP
Sbjct  156   DFHIP  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8205  TALFFS  8188
             T L+FS
Sbjct  223   TGLYFS  228


>pdb|1E4J|A  Chain A, Crystal Structure Of The Soluble Human Fc-Gamma Receptor 
Iii
Length=176


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  65    NDSGEYRCQT  74


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  879  VGWLLL  862
            +GWLLL
Sbjct  89   IGWLLL  94


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  8536  RWVFQS----HLR  8562
             RWVF      HLR
Sbjct  98    RWVFKEEDPIHLR  110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             W+ LQA
Sbjct  91    WLLLQA  96


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4323  WMNTA  4309
             W NTA
Sbjct  114   WKNTA  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +3

Query  6681  EKESV--------SRED  6707
             EK+SV        S ED
Sbjct  22    EKDSVTLKCQGAYSPED  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6149  VSLKC  6163
             V LKC
Sbjct  26    VTLKC  30


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  7659  SGTEKLTITQ  7688
             S T   TITQ
Sbjct  166   SETVNITITQ  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2373  EYHIP  2387
             ++HIP
Sbjct  139   DFHIP  143


>ref|NP_001002274.1|  low affinity immunoglobulin gamma Fc region receptor II-b isoform 
3 precursor [Homo sapiens]
Length=291

 GENE ID: 2213 FCGR2B | Fc fragment of IgG, low affinity IIb, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  106   NDSGEYTCQT  115


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  507  YSLLM  493
            YSLLM
Sbjct  273  YSLLM  277


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  65    DSVTLTCR  72


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  132   WLVLQ  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  218   SSSP---MGIIVAVVT  230


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  230   TGIAVAAIVAAVVALIYC  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  90    LIPTHTQ  96


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +3

Query  8397  RMRR--AEPA----ADRVGA  8438
             R  R  A P     AD VGA
Sbjct  248   RKKRISANPTNPDEADKVGA  267


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  57    QWINVLQEDSVTLTC  71


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2937  NSLEEP  2954
             + LEEP
Sbjct  280   DALEEP  285


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  114   QTGQTSLS  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  230   TGIAVA  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  179   PNFSI  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             D QNR+
Sbjct  286   DDQNRI  291


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  58    WINVLQEDSVTLTC  71


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  64    EDSVTLTCRG--TH  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  106   NDSGE  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  123   PVHLTVL  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             P APP
Sbjct  44    PAAPP  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  154   SWKDKPL  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  212   ITVQAPSSSPM  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2240  KIGPEN  2257
             K+G EN
Sbjct  264   KVGAEN  269


>ref|NP_116126.2|  lamin-B2 [Homo sapiens]
Length=600

 GENE ID: 84823 LMNB2 | lamin B2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  6202  RENDNGE  6222
             REN+NGE
Sbjct  564   RENENGE  570


 Score = 18.0 bits (35),  Expect(2) =  4159
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2327  RELNKR  2344
             RELN R
Sbjct  31    RELNDR  36


 Score = 17.6 bits (34),  Expect(2) =  4159
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2341  ENSRLL  2358
             EN RLL
Sbjct  50    ENDRLL  55


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3717  ELEEMNK  3737
             EL+E NK
Sbjct  107   ELDEVNK  113


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  5353  LLDRGEQEM  5379
             +LD  EQEM
Sbjct  332   MLDAKEQEM  340


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7768  GKFVEL  7785
             GKFV+L
Sbjct  463   GKFVQL  468


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4487  PAKLLWKGE  4513
             P  L WKG+
Sbjct  523   PSTLVWKGQ  531


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  247  PSPASR  230
            PSP SR
Sbjct  386  PSPSSR  391


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8523  QEEEEVGF  8546
             +EEEE  F
Sbjct  571   EEEEEAEF  578


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  1275  LPPVKLARLLE  1243
             L P  L RL E
Sbjct  16    LSPTRLSRLQE  26


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             EEV  R V
Sbjct  550   EEVAMRTV  557


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7664  DREINNY  7684
             D EIN Y
Sbjct  365   DMEINAY  371


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5507  ASPMAGRSG  5533
             A P+ GR G
Sbjct  2     ATPLPGRAG  10


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3014  REILKE  3031
             RE LKE
Sbjct  284   REELKE  289


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1416  RVLAEAM  1436
             R L EAM
Sbjct  316   RELEEAM  322


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6442  RKTSRG  6425
             R TSRG
Sbjct  591   RTTSRG  596


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 16/66 (24%), Positives = 20/66 (30%), Gaps = 28/66 (42%)
 Frame = +3

Query  8391  RE-----RMR-------------RAEPAADRVGAASRDLEKHGaitssntaatnaacaWL  8516
             RE     RMR              A  A DR+    R+LE                   L
Sbjct  284   REELKEARMRLESLSYQLSGLQKQASAAEDRI----RELE-----EAMAGERDKFRKM-L  333

Query  8517  EAQEEE  8534
             +A E+E
Sbjct  334   DAKEQE  339


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5695  YRKIL  5709
             YRK L
Sbjct  371   YRKLL  375


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6188  TNSSSG  6205
             T SSSG
Sbjct  398   TSSSSG  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8167  PTVLESGT  8190
             P VL  GT
Sbjct  429   PSVLGTGT  436


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  7390  GQTIIVWYSAA  7422
             GQ + VW  AA
Sbjct  506   GQMVTVW--AA  514


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8388  VRERMRRAE  8414
             VRE  RR E
Sbjct  210   VRETRRRHE  218


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = +2

Query  5750  KEQKTVAMR-VKEKYQHL  5800
             KEQ    MR V +  Q+L
Sbjct  336   KEQEMTEMRDVMQ--QQL  351


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8514  LEAQEE  8531
             LE +EE
Sbjct  375   LEGEEE  380


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4897  SASSGS  4880
             S SSGS
Sbjct  399   SSSSGS  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  416   RKRL  419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2881  EIELGK  2898
             +IE GK
Sbjct  98    QIEIGK  103


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6278  QKEYAF  6295
             Q EY F
Sbjct  229   QQEYDF  234


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5818  SPPPSPQV  5795
             SP PS  V
Sbjct  385   SPSPSSRV  392


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4055  GQETAY  4072
             G+E AY
Sbjct  490   GEEIAY  495


>pir||JC7604  CD86 spliced variant CD86 deltaTM isoform - human
Length=275


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 7/27 (25%)
 Frame = +2

Query  3626  DQSESELV----NQIIEQLIKKEKVYL  3694
             +QS SELV    +Q  E L+  E VYL
Sbjct  41    NQSLSELVVFWQDQ--ENLVLNE-VYL  64


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1089  LSSILFV  1069
             LS ILFV
Sbjct  3     LSNILFV  9


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  538  FRQDQKNL  561
            F QDQ NL
Sbjct  50   FWQDQENL  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5218  PNPRKMS  5198
             P P KMS
Sbjct  158   PEPKKMS  164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             +NLTC
Sbjct  147   INLTC  151


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8262  SITLSV  8245
             SI LSV
Sbjct  194   SISLSV  199


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1299  TRFLSSNF  1276
             TR LSS F
Sbjct  219   TRLLSSPF  226


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4946  KK--GLIRTH  4969
             KK  G+IR H
Sbjct  109   KKPTGMIRIH  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1537  QPEI  1548
             QPEI
Sbjct  132   QPEI  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6308  DIIPIDN  6328
             +I+PI N
Sbjct  134   EIVPISN  140


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7338  WEQQEAL  7358
             W+ QE L
Sbjct  51    WQDQENL  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4665  VLLNFS  4648
             VL NFS
Sbjct  126   VLANFS  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8778  LACSTIQ  8758
             L CS I+
Sbjct  149   LTCSSIH  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  218  VSLSLS  201
            VS SLS
Sbjct  193  VSISLS  198


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  1784  VSFNFPQVT  1810
             VSF  P VT
Sbjct  199   VSF--PDVT  205


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3890  SCDK  3901
             SCDK
Sbjct  267   SCDK  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6443  SQNQ  6432
             SQNQ
Sbjct  39    SQNQ  42


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  3116  FDMSIGLAPASV  3081
             +D SI L   SV
Sbjct  191   YDVSISL---SV  199


>ref|NP_003725.1|  membrane primary amine oxidase precursor [Homo sapiens]
Length=763

 GENE ID: 8639 AOC3 | amine oxidase, copper containing 3 (vascular adhesion
protein 1) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +1

Query  5386  VDPRLEPWKHPG-SQ  5427
             V P  +PW HPG SQ
Sbjct  44    VSPSAQPWTHPGQSQ  58


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 6/21 (28%)
 Frame = +2

Query  3599  ALGII----QAQPDQSESELV  3649
             AL I+    Q QP+   SELV
Sbjct  124   ALAIVFFGRQPQPN--VSELV  142


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1060  VLVVPAMS  1037
             VLVV  MS
Sbjct  459   VLVVRSMS  466


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1675  IFFRADQ  1695
             I+FR DQ
Sbjct  723   IYFRGDQ  729


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 10/25 (40%)
 Frame = -2

Query  8661  VFFG-------SEL---ALPVPPFL  8617
             VFFG       SEL    LP P ++
Sbjct  128   VFFGRQPQPNVSELVVGPLPHPSYM  152


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  2520  LDISTMCFHRD  2552
             LDI  M F R+
Sbjct  177   LDIDQMIFNRE  187


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3810  MRNITV  3827
             MR++TV
Sbjct  152   MRDVTV  157


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +3

Query  4041  FQQKQG---RKQH  4070
             F+Q QG   R +H
Sbjct  432   FEQNQGLPLRRHH  444


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  8981  LVASSMSAVL  8952
             LV  SMS  L
Sbjct  460   LVVRSMSTLL  469


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5868  FSVALQ  5851
             FSV LQ
Sbjct  97    FSVELQ  102


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7162  LIVAITTI  7139
             LI A+ TI
Sbjct  10    LILAVITI  17


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2054  GRNLLT  2071
             GRNL T
Sbjct  205   GRNLVT  210


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  6557  GSLAEEEVVIRS  6592
             G LAE   V+RS
Sbjct  453   GGLAETVLVVRS  464


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  827  QPR-SDTHVFSI  859
            Q R SD  VFS+
Sbjct  88   QARPSDNCVFSV  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7849  YQASYY  7832
             YQ  YY
Sbjct  266   YQGRYY  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 10/20 (50%)
 Frame = -3

Query  7442  PSANC--S--------AAAL  7413
             PS NC  S        AAAL
Sbjct  91    PSDNCVFSVELQLPPKAAAL  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8011  ISERILGT  8034
             +SE  LGT
Sbjct  511   VSEHTLGT  518


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3739  YLFISSN  3719
             YL+  SN
Sbjct  586   YLYLASN  592


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4569  AFLLGTT  4549
             AFL G T
Sbjct  498   AFLFGAT  504


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1985  VSDHT  1971
             VS+HT
Sbjct  511   VSEHT  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1082  PSYLFL  1065
             P YL+L
Sbjct  584   PRYLYL  589


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5118  GACSIYPL  5095
             GAC + PL
Sbjct  732   GACEVNPL  739


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4797  GLHTGER  4817
             GL+ G+R
Sbjct  217   GLQSGDR  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7060  YFLPHV  7043
             +FL HV
Sbjct  238   FFLHHV  243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4013  ASGYI  4027
             A GYI
Sbjct  491   ATGYI  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  515  YLSTAF  498
            Y S AF
Sbjct  494  YISSAF  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  711  NQVSQ  725
            NQVS+
Sbjct  509  NQVSE  513


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2842  FFWQHYRL  2819
             F W+ Y L
Sbjct  625   FSWERYQL  632


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3062  KDLIA  3076
             KDL+A
Sbjct  672   KDLVA  676


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -3

Query  7547  GA--VDPLGIFPQ  7515
             GA  V+PL   PQ
Sbjct  732   GACEVNPLACLPQ  744


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5522  GRSGDSDE  5545
             GR GD  E
Sbjct  27    GRGGDGGE  34


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = +1

Query  9037  GEPSDPAYKQL  9069
             GEPS     QL
Sbjct  33    GEPS-----QL  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4842  RLPDPNAS  4819
             R P PN S
Sbjct  132   RQPQPNVS  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3400  RSRNL  3414
             R RNL
Sbjct  204   RGRNL  208


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3450  NLVSLLAAP  3424
             NLV +  AP
Sbjct  207   NLVTMTTAP  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5423  VSLKLLV  5443
             V L LLV
Sbjct  243   VGLELLV  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6168  SVHFK  6154
             S HFK
Sbjct  523   SAHFK  527


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8990  GKSLVA  8973
             GK LVA
Sbjct  671   GKDLVA  676


>ref|NP_068769.2|  B-lymphocyte antigen CD20 [Homo sapiens]
 ref|NP_690605.1|  B-lymphocyte antigen CD20 [Homo sapiens]
Length=297

 GENE ID: 931 MS4A1 | membrane-spanning 4-domains, subfamily A, member 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 12/29 (41%)
 Frame = +3

Query  1713  EESFRSGVETTT----PPQKQE--PIDKE  1781
             EE      ET T    PPQ QE  PI+ +
Sbjct  272   EE------ETETNFPEPPQDQESSPIEND  294


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +3

Query  8517  EAQEEE-EVGFPVTPQ  8561
             E +EEE E  FP  PQ
Sbjct  269   EEEEEETETNFPEPPQ  284


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5149  VWLPLW  5132
             VW PLW
Sbjct  84    VWYPLW  89


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +3

Query  8604  SHFLKEKGGLEGL  8642
             SHFLK    +E L
Sbjct  144   SHFLK----MESL  152


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7572  FPEQPQ  7555
             FPE PQ
Sbjct  279   FPEPPQ  284


 Score = 17.6 bits (34),  Expect(2) =  6356
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6308  DIIPI  6322
             +IIPI
Sbjct  263   EIIPI  267


 Score = 17.6 bits (34),  Expect(2) =  6356
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6317  PIDND  6331
             PI+ND
Sbjct  290   PIEND  294


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  4584  SLM-IFAF  4564
             S M IFAF
Sbjct  195   SVMLIFAF  202


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6203  GRMIM  6217
             G MIM
Sbjct  115   GKMIM  119


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2024  LVGPT  2038
             LVGPT
Sbjct  37    LVGPT  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  6920  YCNSTQ-LF  6943
             YC S Q LF
Sbjct  182   YCYSIQSLF  190


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2430  VMHIFQF  2450
             VM IF F
Sbjct  196   VMLIFAF  202


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2414  LLIFSF  2397
             +LIF F
Sbjct  197   MLIFAF  202


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -1

Query  8260  YNPIC-----PL  8240
             Y PIC     PL
Sbjct  77    YAPICVTVWYPL  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5256  GILGQEWK  5279
             GI   EWK
Sbjct  210   GIVENEWK  217


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4581  GIMENRW  4601
             GI EN W
Sbjct  210   GIVENEW  216


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 2/16 (12%)
 Frame = +2

Query  6014  QEVVLVNVTENFNMWK  6061
             QE V   + E  N WK
Sbjct  204   QELVIAGIVE--NEWK  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  982   IQCMQGLLH  1008
             +Q M GL H
Sbjct  55    VQIMNGLFH  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -2

Query  3273  MGSLNLGVFPHIT-M-LSV  3223
             M SL L  F  I  M LS+
Sbjct  119   MNSLSL--FAAISGMILSI  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8908  RRLSNL  8891
             RR+S L
Sbjct  32    RRMSSL  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5028  SIVEIL  5011
             SI +IL
Sbjct  134   SIMDIL  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8675  IKDIL  8661
             I DIL
Sbjct  135   IMDIL  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3168  LILAYF  3151
             LI A+F
Sbjct  198   LIFAFF  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3468  LLIEEDKK  3491
             LL  E+KK
Sbjct  229   LLSAEEKK  236


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5422  SQPK  5433
             SQPK
Sbjct  254   SQPK  257


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4485  DQQSS  4499
             DQ+SS
Sbjct  285   DQESS  289


>ref|NP_001422.1|  band 4.1-like protein 2 isoform a [Homo sapiens]
Length=1005

 GENE ID: 2037 EPB41L2 | erythrocyte membrane protein band 4.1-like 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 21/46 (45%)
 Frame = +2

Query  3425  GAANRETK------LGKAGYVTNRGRQKV----------VTLTDTT  3514
             GAA RETK      L KA        QKV          VTL D T
Sbjct  188   GAAKRETKEVQTNEL-KA----EKASQKVTKKTKTVQCKVTLLDGT  228


 Score = 22.7 bits (46),  Expect =   545
 Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 11/33 (33%)
 Frame = +3

Query  1245  LRAEQASQEV-KNWMTETLLVQNANPDCK-TIL  1337
             L AE ASQ V K   T T  VQ     CK T L
Sbjct  202   LKAEKASQKVTKK--TKT--VQ-----CKVTLL  225


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  3708  HTKELEE  3728
             +TKELEE
Sbjct  367   QTKELEE  373


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +3

Query  1674  NFLQSRPEP  1700
             NF++S PEP
Sbjct  654   NFMESTPEP  662


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  5887  LWGTCVEGSNHH  5922
             LW  CVE   HH
Sbjct  484   LWKVCVE---HH  492


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  6678  QEKESVSRED  6707
             +EK SVS E+
Sbjct  145   EEKPSVSKEE  154


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -1

Query  8914  NARRLS----NLH  8888
             NA RLS    +LH
Sbjct  397   NAKRLSMYGVDLH  409


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +2

Query  3773  LFLDGIDKAQDE  3808
             L L+  DKAQ++
Sbjct  629   LMLEELDKAQED  640


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEW  5158
             ME  PE   P R P NEW
Sbjct  656   MESTPE---P-R-P-NEW  667


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/19 (42%), Positives = 11/19 (57%), Gaps = 7/19 (36%)
 Frame = +2

Query  4394  DIQTKEL------QKQITK  4432
             ++QT EL      QK +TK
Sbjct  196   EVQTNELKAEKASQK-VTK  213


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8448  DLEKH  8462
             DLEKH
Sbjct  233   DLEKH  237


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1257  QASQEVKNWM  1286
             Q S E KNW+
Sbjct  264   QESPEQKNWL  273


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8526  EEEEVG  8543
             EEE+VG
Sbjct  749   EEEDVG  754


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4400  QTKELQ  4417
             QTKEL+
Sbjct  367   QTKELE  372


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  603  QRIEIKDTKE  632
            QR EI  TKE
Sbjct  885  QRTEI-STKE  893


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7170  SSDLEEE  7190
             SSD EEE
Sbjct  38    SSDPEEE  44


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1998  VDIKL  2012
             VDIKL
Sbjct  417   VDIKL  421


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  3197  LTEAVQKITTESI  3235
             LT   Q IT ES+
Sbjct  923   LTA--QTITSESV  933


 Score = 17.2 bits (33),  Expect(2) =  9315
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +2

Query  7271  AKRRVVQRE  7297
             AK  VV+RE
Sbjct  785   AK--VVERE  791


 Score = 16.3 bits (31),  Expect(2) =  9315
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  7161  SPRSSDLEEE  7190
             S  SS+ EEE
Sbjct  742   SSSSSESEEE  751


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = +3

Query  915  HQAAMQMLKETINEEAAE  968
            H+ A   LK+   EEA E
Sbjct  830  HEGA---LKQDMGEEAEE  844


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8925  ARELHPE  8945
             ARE HP+
Sbjct  979   AREQHPD  985


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6002  LWVHRHVWPK  5973
             L + R  WPK
Sbjct  435   LRINRFAWPK  444


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = +1

Query  5782  GEISA----LV  5802
             GEISA    LV
Sbjct  572   GEISAYGPGLV  582


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5438  LVPIAIV  5458
             LV IA+V
Sbjct  581   LVSIAVV  587


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8867  PGERSV  8884
             PGE SV
Sbjct  824   PGEKSV  829


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  3386  KE-PIVGAET  3412
             KE PIV  ET
Sbjct  892   KEVPIVQTET  901


 Score = 16.3 bits (31),  Expect(2) = 16036
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3364  EIMVPVRE  3387
             EI V V E
Sbjct  138   EIKVEVKE  145


 Score = 15.9 bits (30),  Expect(2) = 16036
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  145   EEKPS  149


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7910  PLSFQTH  7930
             PLS QT+
Sbjct  674   PLSLQTQ  680


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3860  PPVVAKEIV  3886
             PPVV  E V
Sbjct  870   PPVVKTEMV  878


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 5/19 (26%)
 Frame = +3

Query  7137  EMVVIATMSPRSSDLEEEI  7193
             EMV I   S R      EI
Sbjct  876   EMVTISDASQRT-----EI  889


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4391  TDIQTKE  4411
             T+I TKE
Sbjct  887   TEISTKE  893


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +1

Query  3949  RNMATRLYTFRRKSYP  3996
             RN+   L+TF  K YP
Sbjct  284   RNLP-WLFTFNVKFYP  298


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5563  QTHQAS  5580
             QT QAS
Sbjct  524   QTRQAS  529


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4523  VIQDN  4537
             VIQ+N
Sbjct  813   VIQEN  817


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5071  LCLVLR  5088
             LCL LR
Sbjct  313   LCLQLR  318


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1955  FIKVR  1969
             +IKVR
Sbjct  456   YIKVR  460


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8455  SRSRDAAP  8432
             SRS D AP
Sbjct  548   SRSLDGAP  555


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3939  TVVQE  3953
             TV+QE
Sbjct  812   TVIQE  816


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +1

Query  4810  EKET----GI  4827
             EKET    GI
Sbjct  65    EKETSESRGI  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1425  AEAMSQ  1442
             AE M Q
Sbjct  129   AEEMAQ  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  4411  ITKTNYKNSKF  4443
             I K  YK S F
Sbjct  445   ILKISYKRSNF  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  4711  ITMKALIQE  4737
             IT    IQE
Sbjct  808   ITVETVIQE  816


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  623  HQGSFRQDRG  652
            H+G   QD G
Sbjct  830  HEGALKQDMG  839


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7921  SDPPPNPE  7944
             S PPP  E
Sbjct  47    SQPPPAAE  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  206  AKGKPEEL  229
            AKG  EE+
Sbjct  125  AKGDAEEM  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6678  QEKESVS  6698
             +EK SVS
Sbjct  153   EEKPSVS  159


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3402  EQKPS  3416
             E+KPS
Sbjct  153   EEKPS  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8714  AELH  8725
             AELH
Sbjct  376   AELH  379


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6919  EKFPSTI  6899
             E F STI
Sbjct  465   EQFESTI  471


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5283  MASTP  5269
             M STP
Sbjct  656   MESTP  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TP+ RP
Sbjct  659   TPEPRP  664


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  1416  RVLAEAM  1436
             RV  E M
Sbjct  703   RVITEEM  709


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5764  SGNESEGE  5787
             S  ESE E
Sbjct  744   SSSESEEE  751


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  5856  VLQKNCGSQSI  5888
             V Q N G Q I
Sbjct  813   VIQENVGAQKI  823


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/19 (36%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +1

Query  5758  EDSGNESE-------GEIS  5793
             +D G E E       GE+S
Sbjct  836   QDMGEEAEEEPQKVNGEVS  854


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7206  GEVNYINI  7229
             GEV  ++I
Sbjct  851   GEVSHVDI  858


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7665  TEKLTITQA  7691
             TE  TI  A
Sbjct  875   TEMVTISDA  883


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7624  RFITP  7610
             RFI P
Sbjct  76    RFIPP  80


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4400  QTKELQ  4417
             +TKE Q
Sbjct  193   ETKEVQ  198


>sp|Q8TEW6.2|DOK4_HUMAN  RecName: Full=Docking protein 4; AltName: Full=Downstream of 
tyrosine kinase 4; AltName: Full=Insulin receptor substrate 
5; Short=IRS-5; Short=IRS5
Length=326

 GENE ID: 55715 DOK4 | docking protein 4 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -2

Query  2472  FLKSSSKGT---EKY  2437
             F KSSSKG    EKY
Sbjct  31    FRKSSSKGPQRLEKY  45


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8982  PCSKLDV  8962
             PC  LDV
Sbjct  145   PCPNLDV  151


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4002  ATRITF  3985
             ATR TF
Sbjct  191   ATRFTF  196


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -2

Query  2454  KGTEKYA---SPT  2425
             KGTE Y     PT
Sbjct  250   KGTEHYSYPCTPT  262


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = +2

Query  3632  SESELVNQIIEQLIK  3676
             SE +L N  I  L K
Sbjct  298   SETDLLNRFI--LLK  310


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2029  RTYTC  2043
             RT+TC
Sbjct  90    RTFTC  94


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2213  EMEK  2224
             EMEK
Sbjct  240   EMEK  243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6383  CPKV  6394
             CPKV
Sbjct  56    CPKV  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  476  SWPVRNIRR  502
            SWP    RR
Sbjct  178  SWPLCSLRR  186


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  809  YFYPC  795
            Y YPC
Sbjct  255  YSYPC  259


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7155  TMSPRS  7172
             TM PRS
Sbjct  263   TMLPRS  268


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4283  QPDLL  4269
             +PDLL
Sbjct  123   EPDLL  127


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  3705  QHTKELEEMNK  3737
             QH   L EM K
Sbjct  233   QHKRVLLEMEK  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7173  SDLEEE  7190
             S+LE E
Sbjct  96    SELEAE  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1508  LNNLSL  1491
             LN+ SL
Sbjct  116   LNDISL  121


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  3218  ITTESIVIW  3244
             IT E I  W
Sbjct  159   ITHENIYLW  167


>emb|CAC28886.1|  immunoglobulin gamma heavy chain variable region [Homo sapiens]
Length=117


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 8/28 (28%)
 Frame = +3

Query  9030  GEWRALR-SCI*AAA---FCLYWVSLVR  9101
             GE   LR SC  AA    F  YW S VR
Sbjct  15    GE--SLRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>sp|P13726.1|TF_HUMAN  RecName: Full=Tissue factor; Short=TF; AltName: Full=Coagulation 
factor III; AltName: Full=Thromboplastin; AltName: CD_antigen=CD142; 
Flags: Precursor
Length=295

 GENE ID: 2152 F3 | coagulation factor III (thromboplastin, tissue factor)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -3

Query  2399  FLTLRDVVF---LI  2367
             FL LRD VF   LI
Sbjct  172   FLSLRD-VFGKDLI  184


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  165  WKISSSG---ARTGT  200
            WK SSSG   A T T
Sbjct  190  WKSSSSGKKTAKTNT  204


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2573  ILLVILSI  2550
             IL +IL I
Sbjct  265   ILVIILAI  272


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1797  SLRSLFGND  1823
             SLR  FG D
Sbjct  174   SLRDVFGKD  182


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2211  VQIST  2197
             VQIST
Sbjct  68    VQIST  72


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3193  FYII  3182
             FYII
Sbjct  253   FYII  256


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3823  VIFLMFIL  3800
             VI L  IL
Sbjct  263   VIILVIIL  270


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6020  LLVGW  6006
             LL GW
Sbjct  20    LLLGW  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  1624  CLSVQSFIWCPS  1589
             C SVQ  I  PS
Sbjct  218   CFSVQAVI--PS  227


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = -1

Query  3823  VIFLMFILGLIYSI  3782
             V+F   IL  I  I
Sbjct  259   VVFVVIILVIILAI  272


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1283  DDRNLV  1300
             D+R LV
Sbjct  161   DERTLV  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4551  TFMSL  4537
             TF+SL
Sbjct  171   TFLSL  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5265  GQEWK  5279
             GQ WK
Sbjct  283   GQSWK  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  4033  CFY  4025
             CFY
Sbjct  81    CFY  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1576  GNVE  1587
             GNVE
Sbjct  113   GNVE  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3661  RAVNKK  3678
             R VN K
Sbjct  228   RTVNRK  233


>ref|NP_055256.1|  sialic acid-binding Ig-like lectin 9 precursor [Homo sapiens]
Length=463

 GENE ID: 27180 SIGLEC9 | sialic acid binding Ig-like lectin 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 23/48 (47%)
 Frame = -2

Query  2925  LTLIPG*I*LAQFNFP----TNFCMSLTVQLSFSGSTI----GCTVHL  2806
             LTLIP      Q   P    T    SLT Q  F G  +      TVHL
Sbjct  198   LTLIP------Q---PQDHGT----SLTCQVTFPGASVTTNK--TVHL  230


 Score = 19.7 bits (39),  Expect(2) =  2926
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4918  TLTVFQ  4935
             T+TVFQ
Sbjct  240   TMTVFQ  245


 Score = 16.8 bits (32),  Expect(2) =  2926
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5015  ISTILGTSS  5041
             +ST+LG  S
Sbjct  250   VSTVLGNGS  258


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4978  GLTMCP  4961
             GLT+CP
Sbjct  291   GLTLCP  296


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -1

Query  2914  PWVNL------TC  2894
             PWV L      TC
Sbjct  308   PWVHLRDAAEFTC  320


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            NPG LE
Sbjct  301  NPGVLE  306


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3542  KLLVTQSS  3519
             KLL  QSS
Sbjct  21    KLLTMQSS  28


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8221  GIEQAN  8204
             GIE AN
Sbjct  388   GIEDAN  393


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLL LL
Sbjct  4     LLLPLL  9


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5884  LLWG  5895
             LLWG
Sbjct  8     LLWG  11


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  8886  LTLLSPGHPSHAG  8848
             LTL  P +PS  G
Sbjct  292   LTL-CPSQPSNPG  303


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  337  WVRER  351
            W RER
Sbjct  10   WGRER  14


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4698  WFYRHH  4715
             W Y HH
Sbjct  128   WNYKHH  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8735  RGQISTD  8755
             RGQ  TD
Sbjct  447   RGQEATD  453


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5301  NCCLSI  5318
             NC LSI
Sbjct  101   NCTLSI  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
 Frame = -2

Query  8769  STIQRSVDI*PLALVCSSANQGSSLVC  8689
             ST   SV    L L+    ++G SL C
Sbjct  191   STTRSSV----LTLIPQPQDHGTSLTC  213


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1842  IFIVTR  1825
             IF+V R
Sbjct  366   IFVVVR  371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5852  RSSTSQG  5832
             R S SQG
Sbjct  396   RGSASQG  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8900  QPPSISSR  8923
             QPP  S R
Sbjct  416   QPPPASAR  423


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4791  MLLLP  4777
             +LLLP
Sbjct  3     LLLLP  7


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1774  TRNCIL  1791
             T NC L
Sbjct  99    TKNCTL  104


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  6007  QP----TRSSIG  6030
             QP     RSS+G
Sbjct  416   QPPPASARSSVG  427


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6264  MLVLIL  6247
             ML L L
Sbjct  1     MLLLLL  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4626  LLATQSS  4606
             LL  QSS
Sbjct  22    LLTMQSS  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8205  LACSMP  8222
             L CS P
Sbjct  162   LTCSVP  167


>pdb|1T83|C  Chain C, Crystal Structure Of A Human Type Iii Fc Gamma Receptor 
In Complex With An Fc Fragment Of Igg1 (Orthorhombic)
 pdb|1T89|C  Chain C, Crystal Structure Of A Human Type Iii Fc Gamma Receptor 
In Complex With An Fc Fragment Of Igg1 (Hexagonal)
Length=176


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  64    NDSGEYRCQT  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  879  VGWLLL  862
            +GWLLL
Sbjct  88   IGWLLL  93


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  8536  RWVFQS----HLR  8562
             RWVF      HLR
Sbjct  97    RWVFKEEDPIHLR  109


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             W+ LQA
Sbjct  90    WLLLQA  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4323  WMNTA  4309
             W NTA
Sbjct  113   WKNTA  117


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +3

Query  6681  EKESV--------SRED  6707
             EK+SV        S ED
Sbjct  21    EKDSVTLKCQGAYSPED  37


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6149  VSLKC  6163
             V LKC
Sbjct  25    VTLKC  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  7659  SGTEKLTITQ  7688
             S T   TITQ
Sbjct  165   SETVNITITQ  174


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2373  EYHIP  2387
             ++HIP
Sbjct  138   DFHIP  142


>ref|NP_056009.1|  myosin-Id [Homo sapiens]
Length=1006

 GENE ID: 4642 MYO1D | myosin ID [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 10/28 (35%)
 Frame = +2

Query  6056  WKN----------DMVEQMHEDIISLWD  6109
             WK           D+VEQ H  II   D
Sbjct  430   WKHIDYFNNQIIVDLVEQQHKGIIAILD  457


 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 7/21 (33%)
 Frame = -1

Query  7474  ELQ-QMLLRLNSPQQIVLLLH  7415
             EL  QML R      IVL L+
Sbjct  692   ELRAQMLIR------IVLFLQ  706


 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +2

Query  7217  LYK------YKVVKIEPL  7252
             LYK      YKV K  PL
Sbjct  884   LYKMDPTKQYKVMKTIPL  901


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +2

Query  4553  VPRR--KAKIIRDYGKQ  4597
             V RR    K  RDYGK+
Sbjct  743   VARRFHGVKTMRDYGKH  759


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 20/75 (26%), Positives = 24/75 (32%), Gaps = 44/75 (58%)
 Frame = +2

Query  6227  EIKNCSFNISTSIRGK-----VQKEYAFFYKLDI----IPIDNDTTSYKLTSCNTSVITQ  6379
             E+KN  ++  T I GK     V         LDI    I  DN+                
Sbjct  364   EVKN--YD--TTIHGKNTVIGV---------LDIYGFEI-FDNN----------------  393

Query  6380  ACPKVSFEPIPIHYC  6424
                  SFE   I YC
Sbjct  394   -----SFEQFCINYC  403


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  1462  MVAEFVTW  1439
             M+ EF TW
Sbjct  641   MISEF-TW  647


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6059  KNDMVE  6076
             K DMVE
Sbjct  307   KTDMVE  312


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1416  RVLAEAM  1436
             RV A+AM
Sbjct  248   RVVADAM  254


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  567  LYNTVAT  587
            LY TVAT
Sbjct  316  LYRTVAT  322


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3338  PTQESR  3321
             PT+ESR
Sbjct  936   PTHESR  941


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7893  TLFTIE  7876
             TLFT E
Sbjct  686   TLFTLE  691


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -1

Query  574  LYNDLSSSDPV  542
            +YN   SS+PV
Sbjct  535  MYN---SSNPV  542


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = -1

Query  2635  DNYVWILFSKRL*DFCH  2585
             D Y  +LFS      CH
Sbjct  852   DKYMNVLFS------CH  862


 Score = 17.6 bits (34),  Expect(2) = 11194
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4613  NHHLPS  4596
             NH LPS
Sbjct  649   NHDLPS  654


 Score = 15.5 bits (29),  Expect(2) = 11194
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4690  AFPETY  4673
             AF +TY
Sbjct  627   AFRQTY  632


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8459  TWSNH  8473
             TW NH
Sbjct  646   TWPNH  650


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4540  TIILYY  4523
             TII YY
Sbjct  726   TIIRYY  731


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1408  WPGPP  1394
             WP PP
Sbjct  762   WPSPP  766


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7024  AWEGD  7010
             AWEG+
Sbjct  822   AWEGN  826


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  1671  GNFLQSRPE  1697
             GN+L S P+
Sbjct  825   GNYLASKPD  833


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7453  RLNSPQ  7436
             RLN PQ
Sbjct  984   RLNQPQ  989


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5190  KLLDIF  5207
             KLL+I+
Sbjct  53    KLLNIY  58


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6853  KDYCFIIS  6830
             KD C +IS
Sbjct  94    KDTCIVIS  101


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3253  SLSPYYY  3233
             SLS Y Y
Sbjct  224   SLSSYNY  230


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 10/21 (47%)
 Frame = +2

Query  8096  LIV----------TRIVELLG  8128
             LIV           RI EL G
Sbjct  927   LIVCLFSKQPTHESRIGELVG  947


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4476  SGFLLS  4459
             SGF LS
Sbjct  997   SGFILS  1002


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7810  VYKI  7821
             VYKI
Sbjct  267   VYKI  270


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8099  IVTRIVELL  8125
             +V  I ELL
Sbjct  296   VVSIIAELL  304


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3788  IDKAQDEHE  3814
             IDK + E+E
Sbjct  327   IDKQHTEQE  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7670  EINNYTSLIH  7699
             E+ NY   IH
Sbjct  364   EVKNYDTTIH  373


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6748  HISYF  6734
             HI YF
Sbjct  432   HIDYF  436


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +2

Query  182  WRPNRDL  202
            W PN DL
Sbjct  647  W-PNHDL  652


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2671  VRSYIQ  2654
             V SYI+
Sbjct  736   VKSYIH  741


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6192  IVVAGE  6209
             IV+ GE
Sbjct  98    IVISGE  103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4557  QEEKQR  4574
             QEE QR
Sbjct  420   QEEYQR  425


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5254  ISFID  5240
             I FID
Sbjct  517   IGFID  521


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  1822  SLPKSDLREV  1793
             S P SDL +V
Sbjct  791   SIPASDLPQV  800


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6097  DYILM  6083
             D++LM
Sbjct  13    DFVLM  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6464  SYYYI  6450
             SY YI
Sbjct  227   SYNYI  231


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7671  KLTITQ  7688
             KL IT+
Sbjct  551   KLSITE  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1318  GFAF  1307
             GFAF
Sbjct  625   GFAF  628


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1782  LYPLTSL  1802
             LY LT L
Sbjct  901   LYNLTGL  907


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3062  KDLI  3073
             KDLI
Sbjct  925   KDLI  928


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9049  DPAYK  9063
             D AYK
Sbjct  83    DAAYK  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5351  AYSAM  5337
             AY AM
Sbjct  85    AYKAM  89


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7082  PISGQI  7099
             PI G+I
Sbjct  176   PIGGHI  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6654  IVQDP  6668
             IVQ P
Sbjct  192   IVQQP  196


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7025  RIKQII  7042
             RI  II
Sbjct  358   RINDII  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5289  EFCNNCC  5309
             +FC N C
Sbjct  397   QFCINYC  403


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4578  LGIMEN  4595
             LG +EN
Sbjct  613   LGLLEN  618


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8316  RAWKG  8330
             RAW G
Sbjct  821   RAWEG  825


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4826  MPVSFSC  4806
             M V FSC
Sbjct  855   MNVLFSC  861


>ref|NP_000868.1|  interleukin-1 receptor type 1 precursor [Homo sapiens]
Length=569

 GENE ID: 3554 IL1R1 | interleukin 1 receptor, type I [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  4909  ICITLTV  4929
             IC+TLTV
Sbjct  341   ICVTLTV  347


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5933  ASDAKAYD  5956
             ASD K YD
Sbjct  379   ASDGKTYD  386


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8355  TCHPSY  8338
             TCH SY
Sbjct  195   TCHASY  200


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4746  EVHIPLG  4766
             E H+PLG
Sbjct  563   EAHVPLG  569


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6375  HRPVQR  6392
             H PVQR
Sbjct  537   HMPVQR  542


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3980  EGKVILV  4000
             E K+ILV
Sbjct  27    EEKIILV  33


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5864  EKLW  5875
             EKLW
Sbjct  79    EKLW  82


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1088  CHPSYLFL  1065
             CH SY +L
Sbjct  196   CHASYTYL  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5856  VLQKNCG  5876
             VL+K CG
Sbjct  414   VLEKQCG  420


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  734  YSAEHPGAN  760
            YS E P AN
Sbjct  279  YSVENP-AN  286


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  828  SPEVIPMFSAL  860
            S E I M+ AL
Sbjct  468  SEEQIAMYNAL  478


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2662  YIQII  2648
             YIQ I
Sbjct  324   YIQLI  328


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7217  IHFS  7206
             IHFS
Sbjct  172   IHFS  175


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  9049  DPAYKQLLF  9075
             D AY QL +
Sbjct  321   DAAYIQLIY  329


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2476  ILPEV  2462
             +LPEV
Sbjct  410   VLPEV  414


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8957  LLTSSL  8974
             LL SSL
Sbjct  13    LLISSL  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  7255  SSTHQGKEK  7281
             S  HQ KEK
Sbjct  72    SRIHQHKEK  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7101  LICPLM  7084
             L+CP M
Sbjct  140   LVCPYM  145


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  4364  GERIVDII  4387
             GE IV++I
Sbjct  433   GEDIVEVI  440


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7937  LGGGSE  7920
             LGG SE
Sbjct  464   LGGSSE  469


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  549  SEELRSLYN  575
            SEE   +YN
Sbjct  468  SEEQIAMYN  476


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  3576  FTSNPESCKAR  3544
             FT  P+S K R
Sbjct  519   FTQGPQSAKTR  529


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1288  VIQFFT  1271
             VI+F T
Sbjct  212   VIEFIT  217


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  7805  LWY  7813
             LWY
Sbjct  365   LWY  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6898  KTVRY  6884
             K VRY
Sbjct  532   KNVRY  536


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -3

Query  6869  LLRIA*RLL-FYYFQIVLLI  6813
             LL    RL  F    I LLI
Sbjct  4     LL----RLICF----IALLI  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8102  VTRIVE  8119
             +TR++E
Sbjct  209   ITRVIE  214


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4069  IFSFKI  4086
             IF FK+
Sbjct  405   IFVFKV  410


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3531  YKQFI  3545
             YK FI
Sbjct  421   YKLFI  425


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  942  ETINE  956
            E INE
Sbjct  438  EVINE  442


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1489  TKERL  1503
             TKE L
Sbjct  556   TKEKL  560


>ref|NP_001832.1|  cannabinoid receptor 2 [Homo sapiens]
 sp|P34972.1|CNR2_HUMAN  RecName: Full=Cannabinoid receptor 2; Short=CB-2; Short=hCB2; 
Short=CB2; AltName: Full=CX5
Length=360

 GENE ID: 1269 CNR2 | cannabinoid receptor 2 (macrophage) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -1

Query  4597  LFSIIPND--LCFSSW  4556
             LF  IPND  L   SW
Sbjct  182   LFPLIPNDYLL---SW  194


 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = -2

Query  6297  KNAYSFCTLPLMLVLI  6250
             K A+ FC    ML LI
Sbjct  278   KKAFAFCS---MLCLI  290


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1807  HSLATT  1824
             HSLATT
Sbjct  267   HSLATT  272


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1082  PSYLF  1068
             PSYLF
Sbjct  68    PSYLF  72


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  7073  TLLFLLSA  7050
             TLL LLSA
Sbjct  41    TLLGLLSA  48


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3739  YLFISS  3722
             YLFI S
Sbjct  70    YLFIGS  75


 Score = 18.0 bits (35),  Expect(2) =  7391
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  882  LVGWLLLI  859
            L  WLL I
Sbjct  191  LLSWLLFI  198


 Score = 16.8 bits (32),  Expect(2) =  7391
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 2/8 (25%)
 Frame = -3

Query  1010  W--CNRPC  993
             W  C RPC
Sbjct  172   WTCCPRPC  179


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7249  IRSSTHQ  7269
             IRSS H+
Sbjct  306   IRSSAHH  312


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6710  GRAFVTIG  6733
             GRA VT G
Sbjct  148   GRALVTLG  155


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5238  CCPKP  5224
             CCP P
Sbjct  174   CCPRP  178


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -2

Query  2490  MVNAV-YFLKS  2461
             MVN V Y L S
Sbjct  293   MVNPVIYALRS  303


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2210  TEMEKEGKI  2236
             TE E +GKI
Sbjct  338   TETEADGKI  346


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8796  YLAQLVLACS  8767
             +LA  V ACS
Sbjct  81    FLASVVFACS  90


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  586  VATVLYNDLSS  554
            VA VLY  LSS
Sbjct  52   VA-VLYLILSS  61


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2860  IDSPAVF  2840
             +DS AVF
Sbjct  100   VDSKAVF  106


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             L+SYL
Sbjct  163   LVSYL  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1779  ELYPL  1793
             EL+PL
Sbjct  181   ELFPL  185


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3612  MIPNAY  3595
             +IPN Y
Sbjct  185   LIPNDY  190


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1426  AKTLAL  1409
             AKTL L
Sbjct  244   AKTLGL  249


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2083  ATNLSQQI  2060
             AT LS Q+
Sbjct  270   ATTLSDQV  277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7088  SGQIRCS  7108
             SG+IR S
Sbjct  303   SGEIRSS  309


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8577  MTYKAAV  8597
             MT+ A V
Sbjct  115   MTFTASV  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9068  CFLPVLGL  9091
             C  PVL L
Sbjct  257   CWFPVLAL  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2193  AFIFS  2179
             AF FS
Sbjct  199   AFLFS  203


>pdb|1FCG|A  Chain A, Ectodomain Of Human Fc Gamma Receptor, Fcgriia
Length=174


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  64    NDSGEYTCQT  73


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = -1

Query  2914  PWVN--------LTC  2894
             PW+N        LTC
Sbjct  15    PWINVLQEDSVTLTC  29


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  90    WLVLQ  94


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +3

Query  4128  AAISP--VLRLGPP  4163
             AA  P  VL L PP
Sbjct  2     AAAPPKAVLKLEPP  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  48    LIPTHTQ  54


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7922  ETIM  7911
             ETIM
Sbjct  104   ETIM  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  72    QTGQTSLS  79


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1159  LTILF  1145
             LT+LF
Sbjct  84    LTVLF  88


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  137   PTFSI  141


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V LTC+
Sbjct  25    VTLTCQ  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  64    NDSGE  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  81    PVHLTVL  87


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T+F S P
Sbjct  161   TLFSSKP  167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8656  EDKISLIC  8679
             ED + L C
Sbjct  22    EDSVTLTC  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  112   SWKDKPL  118


>pdb|1FNL|A  Chain A, Crystal Structure Of The Extracellular Domain Of A Human 
Fcgriii
Length=175


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  64    NDSGEYRCQT  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  879  VGWLLL  862
            +GWLLL
Sbjct  88   IGWLLL  93


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  8536  RWVFQS----HLR  8562
             RWVF      HLR
Sbjct  97    RWVFKEEDPIHLR  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  7659  SGTEKLTITQA  7691
             S T   TITQA
Sbjct  165   SETVNITITQA  175


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             W+ LQA
Sbjct  90    WLLLQA  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4323  WMNTA  4309
             W NTA
Sbjct  113   WKNTA  117


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +3

Query  6681  EKESV--------SRED  6707
             EK+SV        S ED
Sbjct  21    EKDSVTLKCQGAYSPED  37


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6149  VSLKC  6163
             V LKC
Sbjct  25    VTLKC  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2373  EYHIP  2387
             ++HIP
Sbjct  138   DFHIP  142


>ref|NP_689988.1|  coiled-coil domain-containing protein 110 isoform a [Homo sapiens]
 sp|Q8TBZ0.1|CC110_HUMAN  RecName: Full=Coiled-coil domain-containing protein 110; AltName: 
Full=Cancer/testis antigen KM-HN-1; AltName: Full=Cancer/testis 
antigen 52; Short=CT52
Length=833

 GENE ID: 256309 CCDC110 | coiled-coil domain containing 110 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/16 (62%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +1

Query  4435  SKFSGLLQGQQKSTLE  4482
             SK+   LQGQ K TLE
Sbjct  513   SKYN-VLQGQNK-TLE  526


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = +2

Query  6194  SSSGRMIMEKGEIKN  6238
             S   R IME  EI N
Sbjct  651   STAARQIMER-EIEN  664


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4945  IAESEKQ  4925
             IAESE Q
Sbjct  43    IAESENQ  49


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4241  KELKKII  4261
             KE KKII
Sbjct  506   KEFKKII  512


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  2171  LTEEKIKALVE  2203
             LTE+KI  L E
Sbjct  739   LTEDKI--LLE  747


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = -1

Query  4951  FL------IAESEKQSK  4919
             FL      I E EK SK
Sbjct  400   FLVKQGSIISENEKTSK  416


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7914  YRFRPTSQP  7940
             YRF PT  P
Sbjct  201   YRFLPTAPP  209


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +3

Query  1677  FLQSRPEPTAPP  1712
             FL     PTAPP
Sbjct  203   FL-----PTAPP  209


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +2

Query  7631  QIWNHTTWMEWDREINN  7681
             QI      ME  REI N
Sbjct  656   QI------ME--REIEN  664


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1921  METKND  1938
             METK D
Sbjct  709   METKTD  714


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = +3

Query  8871  EREVLEWRFDSRLAFHHVARE  8933
             ER+ LE  F+ R    H  RE
Sbjct  756   ERDTLE--FEMR----HLQRE  770


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4329  LKEKGGLG  4352
             LKEK  LG
Sbjct  596   LKEKSSLG  603


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5079  SVTKLTED  5102
             S+  LTED
Sbjct  735   SISRLTED  742


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -1

Query  295  TH------QSPPLAS  269
            TH      QS PLAS
Sbjct  803  THEDTSSPQSRPLAS  817


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  9033  PQSRP  9019
             PQSRP
Sbjct  810   PQSRP  814


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  8954  LE---VLRMQ  8934
             LE    LRMQ
Sbjct  63    LESFQALRMQ  72


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4841  LHRMEEK  4861
             LH  EEK
Sbjct  139   LHSVEEK  145


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1125  FYKFL  1111
             FY FL
Sbjct  200   FYRFL  204


 Score = 16.8 bits (32),  Expect(2) = 14454
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5934  HQMLK  5948
             HQ+LK
Sbjct  593   HQLLK  597


 Score = 15.9 bits (30),  Expect(2) = 14454
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5806  MGVEM  5820
             M +EM
Sbjct  567   MSIEM  571


 Score = 16.3 bits (31),  Expect(2) = 17314
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8853  HGMDDPERE  8879
             H M D ER+
Sbjct  390   HEMKDKERQ  398


 Score = 15.9 bits (30),  Expect(2) = 17314
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8742  RYPLTF  8759
             RY L F
Sbjct  379   RYTLSF  384


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  615  IKDTKEALDK  644
            IK  KE L K
Sbjct  245  IKQMKEELQK  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3188  VKQLTEAVQK  3217
             +KQ+ E  QK
Sbjct  245   IKQMKEELQK  254


 Score = 16.8 bits (32),  Expect(2) = 20626
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = +2

Query  8642  NSLPKKTRYP*SVDLP  8689
             NSLP       SV+ P
Sbjct  152   NSLPQ------SVNVP  161


 Score = 15.1 bits (28),  Expect(2) = 20626
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8517  EAQEE  8531
             E QEE
Sbjct  119   ENQEE  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8526  EEEEV  8540
             EE+EV
Sbjct  9     EEDEV  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1255  SALRVL  1238
             SAL VL
Sbjct  54    SALKVL  59


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6375  HRPVQRYPLS  6404
             H  V RY LS
Sbjct  374   HSRVPRYTLS  383


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  615  IKDTKEALDK  644
            I D KE L+K
Sbjct  581  IQDEKEMLEK  590


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  202  ESERET  219
            E ER+T
Sbjct  754  ENERDT  759


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  1514  ETLNNLSLV  1488
             +TL N S+V
Sbjct  72    QTLQNVSMV  80


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6491  NVSTVQ  6508
             NVS VQ
Sbjct  76    NVSMVQ  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2064  RFLP  2053
             RFLP
Sbjct  202   RFLP  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1835  IKIGGQLKEAL  1867
             IK   Q+KE L
Sbjct  245   IK---QMKEEL  252


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5700  ENIKTK  5717
             E+IK K
Sbjct  305   EDIKSK  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  2551  MERITSNI  2574
             MER   NI
Sbjct  658   MEREIENI  665


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  5171  LEELKN---EA  5194
             L+E KN   EA
Sbjct  677   LQEIKNAKSEA  687


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6209  MIME  6220
             M+ME
Sbjct  707   MVME  710


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2928  NYVNSLE  2948
             NYV S E
Sbjct  748   NYVRSIE  754


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4658  SKTPYVCFRE  4687
             SKT Y+  RE
Sbjct  786   SKTTYISRRE  795


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4523  VIQDNSDIKV  4552
             VI D S I V
Sbjct  218   VILDKSKITV  227


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4717  MKALI  4731
             MK LI
Sbjct  459   MKPLI  463


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7616  NKSLEQ  7633
             NK LE+
Sbjct  522   NKTLEE  527


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  930  QMLKE  944
            Q+LKE
Sbjct  594  QLLKE  598


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1097  TYPSRR  1114
             TY SRR
Sbjct  789   TYISRR  794


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7042  YNLFY  7028
             YN FY
Sbjct  197   YNNFY  201


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7533  FRYLSTA  7513
             +R+L TA
Sbjct  201   YRFLPTA  207


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3829  ITVIFL  3812
             ITV FL
Sbjct  225   ITVPFL  230


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1054  LVPFR  1068
             L PFR
Sbjct  322   LLPFR  326


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8625  PFLLKSG  8605
             PFL K G
Sbjct  399   PFLVKQG  405


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  810  VEEK  821
            VEEK
Sbjct  484  VEEK  487


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4850  MEEKEI  4867
             +EEK I
Sbjct  525   LEEKNI  530


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  5345  SAMSTPNSEN  5316
             S M   N EN
Sbjct  555   SDMAIVNNEN  564


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  1284  M-TETLLVQN  1310
             M T  LL+Q+
Sbjct  574   MKTNILLIQD  583


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             E E LE
Sbjct  584   EKEMLE  589


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8183  QELKN  8197
             QE KN
Sbjct  678   QEIKN  682


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  117  TDGHTLLEALK  85
            TD + L E LK
Sbjct  713  TDNQILKEELK  723


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2610  ENKIQ  2624
             EN IQ
Sbjct  47    ENQIQ  51


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6702  EDQGEHL  6722
             E+Q E L
Sbjct  119   ENQEENL  125


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4403  TKELQ  4417
             T ELQ
Sbjct  263   TNELQ  267


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1944  ELEVLSK  1964
             ELE L K
Sbjct  314   ELEALVK  320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2312  KLVDFRE  2332
             KL  FRE
Sbjct  321   KLLPFRE  327


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4341  PFLLK  4327
             PFL K
Sbjct  399   PFLVK  403


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  630  EALD  641
            EALD
Sbjct  541  EALD  544


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6669  TTIQE  6683
             TT QE
Sbjct  646   TTLQE  650


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  386  KNSVKARGKE  415
            KNS    GKE
Sbjct  691  KNSLSEIGKE  700


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5933  ASDAKAY  5953
             ASD K Y
Sbjct  816   ASDLKGY  822


>emb|CAC03838.1|  T-cell receptor beta chain [Homo sapiens]
Length=67


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  7898  QGYSPLSF  7921
             QGYSPL F
Sbjct  59    QGYSPLHF  66


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8691  TQGYFP  8708
             TQGY P
Sbjct  58    TQGYSP  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3216  FCTASV  3199
             FC  SV
Sbjct  50    FCASSV  55


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1016  DERTKG  1033
             +ER KG
Sbjct  13    EERAKG  18


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  2594  ILEPFRKQN-PD  2626
             ILE F  Q  PD
Sbjct  20    ILERFSAQQFPD  31


>sp|P06241.3|FYN_HUMAN  RecName: Full=Tyrosine-protein kinase Fyn; AltName: Full=Proto-oncogene 
c-Fyn; AltName: Full=p59-Fyn; AltName: Full=Proto-oncogene 
Syn; AltName: Full=SLK
Length=537

 GENE ID: 2534 FYN | FYN oncogene related to SRC, FGR, YES [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 2/11 (18%)
 Frame = +3

Query  8856  GMDDPEREVLE  8888
             GM++  REVLE
Sbjct  469   GMNN--REVLE  477


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5085  TKLTEDR  5105
             TKLTE+R
Sbjct  12    TKLTEER  18


 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = -3

Query  1235  EPVYIV----SKG----FL  1203
             EP+YIV     KG    FL
Sbjct  336   EPIYIVTEYMNKGSLLDFL  354


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             YI T YMN
Sbjct  339   YIVTEYMN  346


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1845  PIFIVT  1828
             PI+IVT
Sbjct  337   PIYIVT  342


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4951  FLIAESE  4931
             FLI ESE
Sbjct  173   FLIRESE  179


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1466  DAERQ  1480
             DAERQ
Sbjct  158   DAERQ  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5999  TDPNPQ  6016
             TDP PQ
Sbjct  32    TDPTPQ  37


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1139  QDYPSF  1122
             Q YPSF
Sbjct  37    QHYPSF  42


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2062  ISSNYV  2045
             I SNYV
Sbjct  133   IPSNYV  138


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7394  RQLLS  7408
             RQLLS
Sbjct  161   RQLLS  165


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1260  LARLLE  1243
             LARL E
Sbjct  411   LARLIE  416


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +3

Query  8841  PVSLHG-M-----DDPE  8873
             P+SLH  M      DPE
Sbjct  492   PISLHELMIHCWKKDPE  508


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6446  ESQNQPGHN  6420
             E Q QPG N
Sbjct  528   EPQYQPGEN  536


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  955  RKLQNG  972
            RKL NG
Sbjct  206  RKLDNG  211


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8124  RSSTILV  8104
             RS  ILV
Sbjct  392   RSANILV  398


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  3357  GGVLTNSHSG  3328
             GGV   SH G
Sbjct  65    GGVNSSSHTG  74


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4896  DQLIHLY  4916
             D L++LY
Sbjct  324   DKLVQLY  330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6597  LTDLIT  6580
             LT+L+T
Sbjct  456   LTELVT  461


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1837  KDRGATK  1857
             KD  ATK
Sbjct  7     KDKEATK  13


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2514  GVSLFI  2497
             GV LF+
Sbjct  83    GVTLFV  88


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7200  TIGEVNYI  7223
             T GE  YI
Sbjct  126   TTGETGYI  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             V E MNK
Sbjct  341   VTEYMNK  347


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6598  IDRSNY  6581
             I+R NY
Sbjct  381   IERMNY  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  8332  FAIRWVA  8352
             F I W A
Sbjct  428   FPIKWTA  434


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2154  KLNNG  2168
             KL+NG
Sbjct  207   KLDNG  211


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5294  LQQL  5305
             LQQL
Sbjct  224   LQQL  227


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8277  LVELFA  8294
             LV+L+A
Sbjct  326   LVQLYA  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6486  VQMSAQ  6503
             V M AQ
Sbjct  368   VDMAAQ  373


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8831  LVTPC  8845
             LV PC
Sbjct  242   LVVPC  246


>pdb|1I85|A  Chain A, Crystal Structure Of The Ctla-4B7-2 Complex
 pdb|1I85|B  Chain B, Crystal Structure Of The Ctla-4B7-2 Complex
 pdb|1NCN|A  Chain A, The Receptor-Binding Domain Of Human B7-2
 pdb|1NCN|B  Chain B, The Receptor-Binding Domain Of Human B7-2
Length=110


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 7/27 (25%)
 Frame = +2

Query  3626  DQSESELV----NQIIEQLIKKEKVYL  3694
             +QS SELV    +Q  E L+  E VYL
Sbjct  23    NQSLSELVVFWQDQ--ENLVLNE-VYL  46


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  538  FRQDQKNL  561
            F QDQ NL
Sbjct  32   FWQDQENL  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +2

Query  4946  KK--GLIRTH  4969
             KK  G+IR H
Sbjct  91    KKPTGMIRIH  100


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7338  WEQQEAL  7358
             W+ QE L
Sbjct  33    WQDQENL  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6443  SQNQ  6432
             SQNQ
Sbjct  21    SQNQ  24


>ref|NP_057274.1|  cornulin [Homo sapiens]
Length=495

 GENE ID: 49860 CRNN | cornulin [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = +3

Query  3822  TVIGEQWL-------VIL  3854
             TV+GE+W        VIL
Sbjct  436   TVVGEEWVDDHSRETVIL  453


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5305  QLLQN  5291
             QLLQN
Sbjct  3     QLLQN  7


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4832  SGSLH  4846
             SGSLH
Sbjct  102   SGSLH  106


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 7/17 (41%)
 Frame = +2

Query  2459  EDFRKY-------TAFT  2488
             E FR Y       TA T
Sbjct  13    EAFRRYARTEGNCTALT  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5719  FFVLIF  5702
             F VL+F
Sbjct  74    FLVLVF  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7214  ELYKY  7228
             ELY Y
Sbjct  485   ELYSY  489


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2594  ILEPFR  2611
             I E FR
Sbjct  11    IIEAFR  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6507  CTVLT  6493
             CT LT
Sbjct  25    CTALT  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  849  FSALSEGA  872
            F  LSE A
Sbjct  86   FKTLSESA  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3080  IQKQGQ  3097
             +Q QGQ
Sbjct  152   VQTQGQ  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3515  NQKTEL  3532
             NQ TE+
Sbjct  201   NQTTEM  206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 13/29 (44%)
 Frame = +1

Query  8680  GST---THKATSLISRTTHQGQ--GSDIH  8751
             GST   T+  T         GQ  G +IH
Sbjct  311   GSTSTQTQESTN--------GQNRGTEIH  331


>pdb|2FCB|A  Chain A, Human Fc Gamma Receptor Iib Ectodomain (Cd32)
Length=173


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  61    NDSGEYTCQT  70


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  20    DSVTLTCR  27


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  87    WLVLQ  91


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  45    LIPTHTQ  51


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  12    QWINVLQEDSVTLTC  26


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  69    QTGQTSLS  76


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  134   PNFSI  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  13    WINVLQEDSVTLTC  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  19    EDSVTLTCRG--TH  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  61    NDSGE  65


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  78    PVHLTVL  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  109   SWKDKPL  115


>ref|NP_002899.1|  proto-oncogene c-Rel [Homo sapiens]
Length=619

 GENE ID: 5966 REL | v-rel reticuloendotheliosis viral oncogene homolog (avian)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  4809  LY--ADPNML  4786
             LY   DPNML
Sbjct  482   LYGISDPNML  491


 Score = 18.9 bits (37),  Expect(2) =  3323
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -3

Query  9035  LPSPAQATPPW-KVPSGKSLVAS  8970
             LPS  Q  PP   +P G  L AS
Sbjct  436   LPSNSQGIPPFLRIPVGNDLNAS  458


 Score = 17.2 bits (33),  Expect(2) =  3323
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  9038  PLPSP-----AQATP  9009
             PLPS      A+ TP
Sbjct  406   PLPSSSWSSVAHPTP  420


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3857  LPPVVAKEI  3883
             LPPVV   I
Sbjct  167   LPPVVSNPI  175


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5865  KNCGS  5879
             KNCGS
Sbjct  193   KNCGS  197


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7287  TTLLF  7273
             TTLLF
Sbjct  296   TTLLF  300


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2662  YIQII  2648
             YI+II
Sbjct  9     YIEII  13


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1369  SSSVAAGPN  1343
             SSS  AG N
Sbjct  541   SSSMSAGAN  549


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8972  SSMSA  8958
             SSMSA
Sbjct  542   SSMSA  546


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 3/19 (15%)
 Frame = +2

Query  2222  KEGKISKI--GPENPYNTP  2272
             KE  I  I  G  NP+N P
Sbjct  116   KEAIITRIKAG-INPFNVP  133


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -2

Query  6828  NCSLNLLAICFKV  6790
             +C LN    CF V
Sbjct  142   DCDLNVVRLCFQV  154


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7533  FRYL  7522
             FRYL
Sbjct  277   FRYL  280


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2075  SESTDF  2058
             SES DF
Sbjct  272   SESMDF  277


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -1

Query  8371  TLLF-----DH  8354
             TLLF     DH
Sbjct  297   TLLFQKLCQDH  307


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = -2

Query  7608  LAFQGTAVVQMSFPEQP  7558
             LA Q  A +   FPE P
Sbjct  331   LASQ-SAGITVNFPERP  346


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7266  PRQR  7277
             PRQR
Sbjct  16    PRQR  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4019  GYIEAE  4036
             GY EAE
Sbjct  87    GYYEAE  92


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2700  IFVLC  2686
             IF LC
Sbjct  204   IFLLC  208


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1663  EGQGIFFRAD  1692
             E  GIF  AD
Sbjct  226   EAKGIFSQAD  235


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6828  NCSLNLL  6808
             NCS N++
Sbjct  493   NCSVNMM  499


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7069  CFSYFLP  7049
             CF  FLP
Sbjct  151   CFQVFLP  157


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  5045  NNTKKDKAT  5071
             N  KK K T
Sbjct  289   NKAKKQKTT  297


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+ ND
Sbjct  449   IPVGND  454


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2084  TLNFP  2098
             T NFP
Sbjct  339   TVNFP  343


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6694  YPERTR  6711
             +PER R
Sbjct  342   FPERPR  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2341  ENSRLL  2358
             +N RLL
Sbjct  510   DNPRLL  515


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  278  PRLL  267
            PRLL
Sbjct  512  PRLL  515


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3792  SIPSKNST  3769
             SIP   ST
Sbjct  34    SIPGEHST  41


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2235  FQKLG  2249
             FQ LG
Sbjct  102   FQNLG  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4465  QKSTL  4479
             QK TL
Sbjct  294   QKTTL  298


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -2

Query  3669  NCSII*L--TNSDSL  3631
             NCS+  +  T SDS+
Sbjct  493   NCSVN-MMTTSSDSM  506


>emb|CAC28884.1|  immunoglobulin gamma heavy chain variable region [Homo sapiens]
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 8/28 (28%)
 Frame = +3

Query  9030  GEWRALR-SCI*AAA---FCLYWVSLVR  9101
             GE   LR SC  AA    F  YW S VR
Sbjct  16    GE--SLRLSC--AASGFTFSSYWMSWVR  39


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  70    TISRDNAKN  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  51    NIKQD  55


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  56    GSEKYYVD  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  61    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  90


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  34    WMSWVRQ  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  54    QDGSEKY  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  32    SYWMSWV  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6762  VTLVEQNG  6785
             V L EQ G
Sbjct  2     VQLLEQSG  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  23    CAASGF  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  50   ANIKQD  55


>sp|Q9NQC7.1|CYLD_HUMAN  RecName: Full=Ubiquitin carboxyl-terminal hydrolase CYLD; AltName: 
Full=Ubiquitin thiolesterase CYLD; AltName: Full=Ubiquitin-specific-processing 
protease CYLD; AltName: Full=Deubiquitinating 
enzyme CYLD
Length=956

 GENE ID: 1540 CYLD | cylindromatosis (turban tumor syndrome) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query  1766  ADRQGTVS-FNFPQVT  1810
             ADR G    FN PQVT
Sbjct  892   ADRDGGQNGFNIPQVT  907


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  105  CAR-LLCD  125
            CAR LLCD
Sbjct  934  CARRLLCD  941


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8101  CNEDCG  8118
             C+EDCG
Sbjct  189   CDEDCG  194


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = -3

Query  4865  SLFPPFYGDSLTQMP  4821
             SL  PF   SLT MP
Sbjct  418   SL--PF---SLTKMP  427


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  7082  PISGQI-RCSS  7111
             P+S QI RC S
Sbjct  550   PVSNQIERCNS  560


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +1

Query  8044  RSAEPVPLQLPPLERLT  8094
             RS  P PLQ PP   LT
Sbjct  397   RSS-P-PLQPPPVNSLT  411


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +1

Query  8068  QLPPLE---RLTL  8097
             +LPPLE   R  L
Sbjct  226   ELPPLEINSRVSL  238


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2216  MEKEG  2230
             MEKEG
Sbjct  579   MEKEG  583


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5165  ELLEE  5179
             ELLEE
Sbjct  166   ELLEE  170


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3224  WLFF  3213
             WLFF
Sbjct  885   WLFF  888


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  292  HQSPPLA  272
            ++SPPLA
Sbjct  455  QESPPLA  461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7522  KIPKGS  7539
             K+PKGS
Sbjct  40    KVPKGS  45


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 5/24 (20%)
 Frame = -3

Query  2447  LKNMHHPHPVLLLIFSFLTLRDVV  2376
             LK + +PH VL     F    DVV
Sbjct  72    LKILEQPHAVL-----FVDEKDVV  90


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1883  DDTVLE  1900
             DDT LE
Sbjct  208   DDTALE  213


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 5/23 (21%)
 Frame = -2

Query  6060  FHMLKFSVT-FTNTTSCGLGSVG  5995
             FH L FS T   NT     GS+G
Sbjct  416   FHSLPFSLTKMPNTN----GSIG  434


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3332  EWEFVN  3349
             EW F+N
Sbjct  735   EWSFIN  740


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3117  FIKSHLK  3137
             FI S LK
Sbjct  738   FINSNLK  744


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = +2

Query  3542  YLALQD-SGLEVNIVTDSQ  3595
             YL LQ+ S      VTD Q
Sbjct  22    YLLLQECS------VTDKQ  34


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  8883  LEWRF-DSRLAF  8915
             LEW F +S L F
Sbjct  734   LEWSFINSNLKF  745


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3222  VIFC  3211
             VIFC
Sbjct  249   VIFC  252


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  8338  IRWVASGQ  8361
             IRW+  GQ
Sbjct  488   IRWI--GQ  493


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5701  KILRQRKI  5724
             KI+  RKI
Sbjct  658   KIMKLRKI  665


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  3566  LEVNIVTD  3589
             LE NI TD
Sbjct  773   LELNI-TD  779


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -1

Query  5866  FCST--TD-HQHPK  5834
             FC T  T  H HPK
Sbjct  816   FCKTCNTQVHLHPK  829


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7865  FAVLSI  7882
             FAVL I
Sbjct  862   FAVLCI  867


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 10/20 (50%)
 Frame = -1

Query  208  RFQVPVRAPLL-E-----IF  167
            RF    R PLL E     IF
Sbjct  147  RF----RGPLLAERTVSGIF  162


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 6/14 (42%), Gaps = 6/14 (42%)
 Frame = -1

Query  2698  FCSMLP------YF  2675
             FC  LP      YF
Sbjct  251   FCDVLPGKESLGYF  264


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2828  VLPEKDS  2848
             VLP K+S
Sbjct  254   VLPGKES  260


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2189  KALVEICTE  2215
             K L EI T+
Sbjct  386   KSLTEISTD  394


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  379  RSNSPPL  359
            RS SPPL
Sbjct  397  RS-SPPL  402


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8379  IQSHY  8365
             IQ HY
Sbjct  594   IQGHY  598


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1092  YLSSILF  1072
             YL S LF
Sbjct  602   YLDSTLF  608


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5921  TLFC  5932
             TLFC
Sbjct  606   TLFC  609


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6206  RMIMEKGE  6229
             R I+EK E
Sbjct  663   RKILEKVE  670


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -2

Query  3774  STFL------IPAL  3751
             ST L      IPAL
Sbjct  293   STILLHINDIIPAL  306


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 13/37 (35%)
 Frame = -3

Query  9053  GSEG-SPLP------------SPAQATPPWKVPSGKS  8982
             GS G SPL              P Q  PP   P G S
Sbjct  431   GSIGHSPLSLSAQSVMEELNTAPVQESPPLAMPPGNS  467


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6243  LSISAQ  6260
             LS SAQ
Sbjct  438   LSLSAQ  443


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8619  EKGGLE  8636
             EK GLE
Sbjct  580   EKEGLE  585


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/17 (35%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = -2

Query  4872  CYI--------SFSSIL  4846
             CY          FSS+L
Sbjct  601   CYLDSTLFCLFAFSSVL  617


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3302  STMFPMFPF  3276
             ST+F +F F
Sbjct  605   STLFCLFAF  613


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2190  FIFSSV  2173
             F FSSV
Sbjct  611   FAFSSV  616


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1309  MRTQIV  1326
             +RT+IV
Sbjct  640   LRTEIV  645


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  5831  LLGMLMICSATEK  5869
             LL  L  CS T+K
Sbjct  23    LL--LQECSVTDK  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             LEL E+
Sbjct  202   LELIED  207


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8820  ENTSLLH  8840
             E T LLH
Sbjct  292   ESTILLH  298


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2954  KALTEV  2971
             K LTE+
Sbjct  386   KSLTEI  391


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8148  RASHPLRP  8125
             R S PL P
Sbjct  397   RSSPPLQP  404


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  980  HSIPF  966
            HS PF
Sbjct  417  HSLPF  421


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -1

Query  1159  LTILFNPRIIHLL  1121
             L ILF     H L
Sbjct  686   LNILFH----HIL  694


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6215  MEKGE  6229
             MEK E
Sbjct  719   MEKNE  723


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/33 (36%), Positives = 13/33 (39%), Gaps = 19/33 (57%)
 Frame = -1

Query  2578  LEYCW*SFPSLWKHIVLI-SN------PWCLIV  2501
             LE  W SF         I SN      P CLI+
Sbjct  734   LE--W-SF---------INSNLKFAEAPSCLII  754


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  996  LHALD  982
            LH LD
Sbjct  923  LHSLD  927


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8741  QISTD  8755
             +ISTD
Sbjct  390   EISTD  394


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1701  TAPPEES  1721
             TAP +ES
Sbjct  451   TAPVQES  457


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5543  EELIRT  5560
             +EL RT
Sbjct  637   QELLRT  642


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  2368  LNFPEVLSSLI  2336
             L F E  S LI
Sbjct  743   LKFAEAPSCLI  753


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6946  IKQLC  6932
             IKQ C
Sbjct  813   IKQFC  817


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8283  ELFA  8294
             ELFA
Sbjct  860   ELFA  863


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5352  VTRQRR  5369
             VT +RR
Sbjct  310   VTQERR  315


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5090  FRNTR  5076
             FR TR
Sbjct  518   FRGTR  522


>ref|NP_003992.3|  low affinity immunoglobulin gamma Fc region receptor II-b isoform 
1 precursor [Homo sapiens]
 sp|P31994.2|FCG2B_HUMAN  RecName: Full=Low affinity immunoglobulin gamma Fc region receptor 
II-b; Short=IgG Fc receptor II-b; AltName: Full=Fc-gamma 
RII-b; Short=Fc-gamma-RIIb; Short=FcRII-b; AltName: Full=CDw32; 
AltName: CD_antigen=CD32; Flags: Precursor
Length=310

 GENE ID: 2213 FCGR2B | Fc fragment of IgG, low affinity IIb, receptor (CD32)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  106   NDSGEYTCQT  115


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  507  YSLLM  493
            YSLLM
Sbjct  292  YSLLM  296


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9071  FLPVL  9085
             FLPVL
Sbjct  6     FLPVL  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2586  MLLW  2575
             MLLW
Sbjct  28    MLLW  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             D +TL CR
Sbjct  65    DSVTLTCR  72


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5819  WGTMLL  5836
             WG MLL
Sbjct  25    WGHMLL  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  132   WLVLQ  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  7189  SSSRSEDLGLIVAITT  7142
             SSS    +G IVA+ T
Sbjct  218   SSSP---MGIIVAVVT  230


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  4144  TG-EIAAIVS-----MYC  4109
             TG  +AAIV       YC
Sbjct  230   TGIAVAAIVAAVVALIYC  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  90    LIPTHTQ  96


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/15 (40%), Positives = 6/15 (40%), Gaps = 7/15 (46%)
 Frame = +3

Query  3837  QWL-------VILTC  3860
             QW        V LTC
Sbjct  57    QWINVLQEDSVTLTC  71


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8421  ADRVGA  8438
             AD VGA
Sbjct  281   ADKVGA  286


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2937  NSLEEP  2954
             + LEEP
Sbjct  299   DALEEP  304


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  114   QTGQTSLS  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8222  TAIAVA  8239
             T IAVA
Sbjct  230   TGIAVA  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5232  PKPWSQIL  5209
             P PW + L
Sbjct  22    PQPWGHML  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  179   PNFSI  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4477  KWISAVP  4457
             K ISA P
Sbjct  250   KRISALP  256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5937  DAQNRV  5920
             D QNR+
Sbjct  305   DDQNRI  310


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8828  GVLSF  8814
             G+LSF
Sbjct  2     GILSF  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 6/14 (42%), Gaps = 8/14 (57%)
 Frame = -1

Query  2911  WVN--------LTC  2894
             W+N        LTC
Sbjct  58    WINVLQEDSVTLTC  71


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  8656  EDKISLIC-GSTTH  8694
             ED + L C G  TH
Sbjct  64    EDSVTLTCRG--TH  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  106   NDSGE  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  123   PVHLTVL  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3165  ILAYFPV  3145
             IL + PV
Sbjct  3     ILSFLPV  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             P APP
Sbjct  44    PAAPP  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  154   SWKDKPL  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 5/11 (45%), Gaps = 0/11 (0%)
 Frame = -2

Query  8259  ITLSVPSATAM  8227
             IT   PS   M
Sbjct  212   ITVQAPSSSPM  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2240  KIGPEN  2257
             K+G EN
Sbjct  283   KVGAEN  288


>ref|NP_689518.1|  KTEL motif-containing protein 1 precursor [Homo sapiens]
Length=392

 GENE ID: 56983 KTELC1 | KTEL (Lys-Tyr-Glu-Leu) containing 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 12/21 (57%)
 Frame = -3

Query  5924  EWW------------LLPSTQ  5898
             EWW            LLPS Q
Sbjct  2     EWWASSPLRLWLLLFLLPSAQ  22


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4084  ISRKM  4098
             ISRKM
Sbjct  72    ISRKM  76


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1634  FREDL  1648
             FREDL
Sbjct  187   FREDL  191


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -3

Query  7070  LLFLL-SA  7050
             LLFLL SA
Sbjct  14    LLFLLPSA  21


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8115  WNFWDAG  8135
             W FW+ G
Sbjct  164   WTFWEGG  170


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  311  SKFLAY  294
            SKFL Y
Sbjct  367  SKFLSY  372


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 10/21 (47%)
 Frame = +2

Query  8990  RWGLSREA-------WPGRDW  9031
             RW L RE        WP   W
Sbjct  183   RWDLFREDLVRSAAQWP---W  200


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2148  PSIPGFNF  2125
             P IP F F
Sbjct  143   PAIPVFSF  150


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2285  KKKDST  2302
             KKK+ST
Sbjct  201   KKKNST  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 10/25 (40%)
 Frame = +2

Query  4451  YYRDS-----RNPL----WKGPAKL  4498
             Y+R S     R+PL     K P KL
Sbjct  208   YFRGSRTSPERDPLILLSRKNP-KL  231


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  233  ERAPLVSLS  207
            ER PL+ LS
Sbjct  217  ERDPLILLS  225


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8340  YSKILS  8323
             YSK LS
Sbjct  366   YSKFLS  371


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1648  QIFPKKL  1628
             QI PK L
Sbjct  382   QIIPKML  388


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3987  FPSKC  3973
             FPS C
Sbjct  104   FPSRC  108


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3117  FIKSHL  3134
             FI  HL
Sbjct  345   FIRNHL  350


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +3

Query  6588  DLS-----ISRTML  6614
             DL      ISR M+
Sbjct  64    DLTPFRGGISRKMM  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1958  IKVRQYDQI  1984
             I VR Y Q+
Sbjct  129   INVRDYPQV  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  292  EYAKN  306
            EY KN
Sbjct  235  EYTKN  239


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = -1

Query  5143  LPLWPLVFWGLFHLSS  5096
             L LW L    LF L S
Sbjct  9     LRLWLL----LFLLPS  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  2378  VFLIELPRSLE  2346
             VF  +  RSLE
Sbjct  34    VFIDQINRSLE  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1306  KMRTQIVR  1329
             KM  ++VR
Sbjct  75    KMMAEVVR  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/4 (75%), Positives = 3/4 (75%), Gaps = 0/4 (0%)
 Frame = +1

Query  8452  WKNM  8463
             WK M
Sbjct  242   WKSM  245


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2516  LVSHCLY  2496
             LV HC Y
Sbjct  259   LVDHCKY  265


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9153  LKQWV  9139
             LK WV
Sbjct  305   LKPWV  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  68   LKQWV  54
            LK WV
Sbjct  305  LKPWV  309


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  840  IPMFS  854
            IP FS
Sbjct  145  IPVFS  149


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3150  PVFRF  3136
             PVF F
Sbjct  146   PVFSF  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5392  PRLEPW  5409
             P L PW
Sbjct  303   PQLKPW  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3650  NQIIEQLIKKE  3682
             +QII  + K E
Sbjct  381   DQIIPKMLKTE  391


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7616  NKSLE  7630
             N SLE
Sbjct  40    NRSLE  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1054  LVPFR  1068
             L PFR
Sbjct  65    LTPFR  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2552  WKGSPAI  2572
             W G PA+
Sbjct  167   WEGGPAV  173


>pdb|1JPS|T  Chain T, Crystal Structure Of Tissue Factor In Complex With Humanized 
Fab D3h44
Length=219


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -3

Query  2399  FLTLRDVVF---LI  2367
             FL LRD VF   LI
Sbjct  140   FLSLRD-VFGKDLI  152


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  165  WKISSSG---ARTGT  200
            WK SSSG   A T T
Sbjct  158  WKSSSSGKKTAKTNT  172


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1797  SLRSLFGND  1823
             SLR  FG D
Sbjct  142   SLRDVFGKD  150


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2211  VQIST  2197
             VQIST
Sbjct  36    VQIST  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  1624  CLSVQSFIWCPS  1589
             C SVQ  I  PS
Sbjct  186   CFSVQAVI--PS  195


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1283  DDRNLV  1300
             D+R LV
Sbjct  129   DERTLV  134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4551  TFMSL  4537
             TF+SL
Sbjct  139   TFLSL  143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  4033  CFY  4025
             CFY
Sbjct  49    CFY  51


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1576  GNVE  1587
             GNVE
Sbjct  81    GNVE  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3661  RAVNKK  3678
             R VN K
Sbjct  196   RTVNRK  201


>ref|NP_001562.1|  interferon regulatory factor 3 [Homo sapiens]
Length=427

 GENE ID: 3661 IRF3 | interferon regulatory factor 3 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  172  SLAVAPE  192
            SLAVAPE
Sbjct  159  SLAVAPE  165


 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -1

Query  9100  LTRETQYRQKAAAYMQDL  9047
             LT + QY     AY+QDL
Sbjct  403   LTSD-QYK----AYLQDL  415


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7168  DLQTWRR  7188
             DL TW R
Sbjct  72    DLPTWKR  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5794  ALVEM  5808
             ALVEM
Sbjct  374   ALVEM  378


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  1584  HISNS-PFS  1561
             HISNS P S
Sbjct  394   HISNSHPLS  402


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3710  VLVPMPD  3690
             VL P+PD
Sbjct  148   VLAPLPD  154


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7512  RILAWSCLMPQ  7480
             RIL W  L  Q
Sbjct  7     RILPW--LVSQ  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  382  HRSNSPPL  359
            H SNS PL
Sbjct  394  HISNSHPL  401


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6671  NNTRKRIRI  6697
             N  R R RI
Sbjct  28    NKSRTRFRI  36


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7482  QTVSC  7468
             QT+SC
Sbjct  218   QTISC  222


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3338  EFVN  3349
             EFVN
Sbjct  108   EFVN  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6004  PQPTRS  6021
             PQP RS
Sbjct  168   PQPLRS  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8995  PAESPL  8978
             P E PL
Sbjct  187   PSENPL  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1047  GTTSTLQEQI  1076
             G TS  QE I
Sbjct  130   GSTSDTQEDI  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6101  LWDQSL  6118
             LW Q L
Sbjct  281   LWAQRL  286


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2341  LIKFSE  2324
             LI F E
Sbjct  329   LITFTE  334


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4643  SNPHP  4629
             SN HP
Sbjct  396   SNSHP  400


>ref|NP_647612.1|  megakaryocyte-associated tyrosine-protein kinase isoform a [Homo 
sapiens]
Length=507

 GENE ID: 4145 MATK | megakaryocyte-associated tyrosine kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  749  DVLHYRV  729
            DV HYRV
Sbjct  165  DVIHYRV  171


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  7896  GRDIHHYR  7919
             GRD+ HYR
Sbjct  163   GRDVIHYR  170


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  8166  RFHQYLRASHP  8134
             RF   LRA HP
Sbjct  28    RF---LRAWHP  35


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -1

Query  9049  LRARHSPVPPRPRLP  9005
             LRA H P P   R+P
Sbjct  30    LRAWHPP-PVSARMP  43


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  2328  ENLIRELKTSG  2360
             E L REL   G
Sbjct  476   EKLARELRSAG  486


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3276  KRKHG  3290
             KRKHG
Sbjct  211   KRKHG  215


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2249  AQFLKFSL  2226
             AQ L FSL
Sbjct  327   AQLLQFSL  334


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  774  ISPRTLNAW  800
            +SPR L AW
Sbjct  25   VSPRFLRAW  33


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  6900  IVEGNFSTVIQ  6932
             I EG F  V Q
Sbjct  241   IGEGEFGAVLQ  251


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3191  KQLTEAVQK  3217
             K+  EAV+K
Sbjct  431   KEVSEAVEK  439


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1601  LVSFLST  1581
             LV FL T
Sbjct  312   LVNFLRT  318


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8473  QVAIQQL  8493
             Q A+QQL
Sbjct  130   QEAVQQL  136


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3450  NLVSLL  3433
             NLV LL
Sbjct  287   NLVRLL  292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  943  RPSMRKL  963
            RP  RKL
Sbjct  468  RPPFRKL  474


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8900  QPPSISSR  8923
             +PP +S R
Sbjct  34    HPPPVSAR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5291  ILQQLLFI  5314
             IL+Q L+I
Sbjct  295   ILHQGLYI  302


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PPE C
Sbjct  445   PPEGC  449


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1746  TPPQKQEP  1769
             T P  QEP
Sbjct  500   TSPRSQEP  507


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4803  ADPNMLLLP  4777
             ADP + L+P
Sbjct  113   ADPKLSLMP  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7517  VERYLKD  7537
             VE Y KD
Sbjct  193   VEHYSKD  199


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3737  LVHFL  3723
             LV FL
Sbjct  312   LVNFL  316


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2592  FVMLLW  2575
             F  LLW
Sbjct  410   FGVLLW  415


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6993  LKEVTQ  7010
             LKEV +
Sbjct  430   LKEVSE  435


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8871  EREVL  8885
             ERE L
Sbjct  107   EREAL  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3252  LLNL  3263
             LLNL
Sbjct  229   LLNL  232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5019  LQYLALAA  5042
             LQ L L A
Sbjct  232   LQHLTLGA  239


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  6140  GLILHMAL  6117
             G ILH  L
Sbjct  293   GVILHQGL  300


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3836  AMASDFNL  3859
             A  SDF L
Sbjct  366   AKVSDFGL  373


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8925  AREL  8936
             AREL
Sbjct  479   AREL  482


>emb|CAC28888.1|  immunoglobulin gamma heavy chain variable region [Homo sapiens]
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 8/28 (28%)
 Frame = +3

Query  9030  GEWRALR-SCI*AAA---FCLYWVSLVR  9101
             GE   LR SC  AA    F  YW S VR
Sbjct  16    GE--SLRLSC--AASGFTFSSYWMSWVR  39


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  70    TISRDNAKN  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  51    NIKQD  55


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  56    GSEKYYVD  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  61    YVDSVRGRFTISRDNAKNSLYLQMNSLRAE  90


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  34    WMSWVRQ  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  54    QDGSEKY  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  32    SYWMSWV  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6762  VTLVEQNG  6785
             V L EQ G
Sbjct  2     VQLLEQSG  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  23    CAASGF  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  50   ANIKQD  55


>pdb|3F5X|A  Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound 
At Its Active Site
 pdb|3F5X|C  Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound 
At Its Active Site
Length=298


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 14/34 (41%)
 Frame = -3

Query  2453  RE---LKNMHHPHPV-LL----------LIFSFL  2394
             RE   LK + HP  V LL          L+F FL
Sbjct  50    REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL  83


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = -1

Query  4504  PEELCW-----------SFPKW  4472
             P+E  W           SFPKW
Sbjct  222   PDEVVWPGVTSMPDYKPSFPKW  243


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7552  PQELLI  7535
             PQ LLI
Sbjct  130   PQNLLI  135


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2054  GRNLLTQ  2074
             GR LL Q
Sbjct  259   GRSLLSQ  265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  143  PQTLLVSVE  169
            PQ LL+  E
Sbjct  130  PQNLLINTE  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  181  LLEIFHTD  158
            LL++ HT+
Sbjct  66   LLDVIHTE  73


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4112  IHTDN  4126
             IHT+N
Sbjct  70    IHTEN  74


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  8808  PLL-SYLAQL  8782
             PL  SYL QL
Sbjct  102   PLIKSYLFQL  111


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3794  YLFHL  3780
             YLF+L
Sbjct  107   YLFQL  111


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  780  VIWPDV  763
            V+WP V
Sbjct  225  VVWPGV  230


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3050  YDPSK  3064
             YDP K
Sbjct  269   YDPNK  273


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +2

Query  3935  VDCSPGIWQLDC  3970
             VD    IW L C
Sbjct  184   VD----IWSLGC  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7807  VVYK  7818
             VVYK
Sbjct  17    VVYK  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 10/19 (52%)
 Frame = +2

Query  5414  IQEVSL----------KLL  5440
             I E+SL          KLL
Sbjct  49    IREISLLKELNHPNIVKLL  67


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5190  KLLDI  5204
             KLLD+
Sbjct  65    KLLDV  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  194  RDLKAKGKPEEL  229
            RDL    KP+ L
Sbjct  126  RDL----KPQNL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  2719  MLSQLLYFCSMLPY  2678
             +LSQ      ML Y
Sbjct  262   LLSQ------MLHY  269


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2153  LGHPF  2139
             L HPF
Sbjct  281   LAHPF  285


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5888  YGVPV  5902
             +GVPV
Sbjct  152   FGVPV  156


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1192  LMSRML  1175
             L+S ML
Sbjct  262   LLSQML  267


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6254  STSIR  6268
             ST IR
Sbjct  46    STAIR  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8907  LAFHHVARELH  8939
             LAF H  R LH
Sbjct  115   LAFCHSHRVLH  125


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1018  IWPG  1007
             +WPG
Sbjct  226   VWPG  229


>sp|P07357.2|CO8A_HUMAN  RecName: Full=Complement component C8 alpha chain; AltName: Full=Complement 
component 8 subunit alpha; Flags: Precursor
Length=584

 GENE ID: 731 C8A | complement component 8, alpha polypeptide [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  9030  GEWRALR  9050
             GEWR LR
Sbjct  183   GEWRELR  189


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 10/29 (34%)
 Frame = +2

Query  6038  TENFNMWKND-MVEQ-MHEDIISLWDQSL  6118
             T  F M K+D M ++ M      L  QSL
Sbjct  298   TAHFKMRKDDIMLDEGM------L--QSL  318


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7849  YQASYY  7832
             Y ASYY
Sbjct  168   YDASYY  173


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +3

Query  8388  VRERMRRAE-PAA  8423
             V +R RRA  PAA
Sbjct  24    VNQRVRRAATPAA  36


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  4848  EWRKKRY-ST  4874
             EWR  RY ST
Sbjct  184   EWRELRYDST  193


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  1853  LK---EALLDTG  1879
             LK   EAL DTG
Sbjct  213   LKYHFEALADTG  224


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  1883  DDTVLEE------MSLP  1915
             DD  L+E      M LP
Sbjct  306   DDIMLDEGMLQSLMELP  322


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4568  AKIIRDYG  4591
             AK I DYG
Sbjct  331   AKFINDYG  338


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  3823  VIFLMFILGL  3794
             V+F  FIL L
Sbjct  4     VVF--FILSL  11


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5784  RNISTC  5801
             R+I TC
Sbjct  370   RDITTC  375


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7416  CSSRTIC  7436
             CSS T C
Sbjct  84    CSSSTTC  90


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5572  DESDCSD  5552
             DE DC D
Sbjct  126   DEDDCED  132


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = +1

Query  2392  VKKEKISNS  2418
             VKK+K S+S
Sbjct  240   VKKDK-SDS  247


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3122  DKFDMSIGLAPA  3087
             D F   IG  PA
Sbjct  246   DSFGVTIGIGPA  257


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF  LSL+
Sbjct  5     VFFILSLM  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQA+C
Sbjct  92    RQAQC  96


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -1

Query  6430  RGTIMYGNW---LK  6398
             R TI Y  W   LK
Sbjct  438   RSTITYRSWGRSLK  451


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4179  IPAHQQAAL  4153
             IP  Q AAL
Sbjct  146   IPGSQKAAL  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7960  GPVGSP  7943
             GP GSP
Sbjct  255   GPAGSP  260


 Score = 15.5 bits (29),  Expect(2) = 34043
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6223  FLHYH  6209
             FL YH
Sbjct  212   FLKYH  216


 Score = 15.5 bits (29),  Expect(2) = 34043
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6196  TIGI  6185
             TIGI
Sbjct  251   TIGI  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  4654  LFHVLILILS--TCH  4616
             +F V   ILS  TC+
Sbjct  1     MFAVVFFILSLMTCQ  15


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2817  TVHLSGWS  2794
             T +LS WS
Sbjct  38    TCQLSNWS  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8995  PAESPL  8978
             PA SPL
Sbjct  256   PAGSPL  261


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1114  KFIKD  1128
             KFI D
Sbjct  332   KFIND  336


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4570  CFSSW  4556
             C SSW
Sbjct  544   CWSSW  548


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -1

Query  6715  SPWSSLDTDSFSC  6677
             S W    TD F C
Sbjct  45    SEW----TDCFPC  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  478  GLTANRS  458
            GL  NRS
Sbjct  433  GLAQNRS  439


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/14 (35%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  3047  YYDPSKDLIAEIQK  3088
             +YD   DL   + K
Sbjct  229   FYDNANDLLSKVKK  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             L E+NK
Sbjct  276   LNELNK  281


>pdb|1H9V|A  Chain A, Human Fc-Gamma-Receptor Iia (Fcgriia), Monoclinic
Length=172


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  7920  NDNGEYPCLT  7891
             ND GEY C T
Sbjct  61    NDSGEYTCQT  70


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 8/15 (53%)
 Frame = -1

Query  2914  PWVN--------LTC  2894
             PW+N        LTC
Sbjct  12    PWINVLQEDSVTLTC  26


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8759  WMVLQ  8773
             W+VLQ
Sbjct  87    WLVLQ  91


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4182  LIPAHQQ  4162
             LIP H Q
Sbjct  45    LIPTHTQ  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7922  ETIM  7911
             ETIM
Sbjct  101   ETIM  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4143  VLRLGPP  4163
             VL L PP
Sbjct  6     VLKLEPP  12


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5563  QTHQASLS  5586
             QT Q SLS
Sbjct  69    QTGQTSLS  76


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2229  PSFSI  2215
             P FSI
Sbjct  134   PTFSI  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V LTC+
Sbjct  22    VTLTCQ  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6208  NDNGE  6222
             ND GE
Sbjct  61    NDSGE  65


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6480  PVPLNVL  6460
             PV L VL
Sbjct  78    PVHLTVL  84


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3582  TMFTSNP  3562
             T+F S P
Sbjct  158   TLFSSKP  164


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8656  EDKISLIC  8679
             ED + L C
Sbjct  19    EDSVTLTC  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7607  SWSNKSL  7627
             SW +K L
Sbjct  109   SWKDKPL  115


>ref|NP_004146.1|  serpin B9 [Homo sapiens]
Length=376

 GENE ID: 5272 SERPINB9 | serpin peptidase inhibitor, clade B (ovalbumin),
member 9 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 7/23 (30%)
 Frame = -2

Query  2523  LIPGVSLFI-----LGMVNAVYF  2470
             L PG S  I     L +VNA+YF
Sbjct  147   LLPGSS--IDAETRLVLVNAIYF  167


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  193  VRAPLLE  173
            VRA LLE
Sbjct  212  VRAQLLE  218


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  8238  ATAMAVALS  8212
             AT MA ALS
Sbjct  51    ATQMAQALS  59


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1649  AFLQGKA  1669
             AF QGKA
Sbjct  292   AFQQGKA  298


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4295  TAVQMA  4312
             TA QMA
Sbjct  50    TATQMA  55


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5400  RALEASRK  5423
             RA E SRK
Sbjct  123   RAAEESRK  130


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5561  VRLIKLLYQ  5587
             +RL K L Q
Sbjct  13    IRLLKILCQ  21


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6682  SCIVVGSC  6659
             SC VV  C
Sbjct  334   SCFVVAEC  341


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2774  MEVLSD  2757
             ME LS+
Sbjct  1     METLSN  6


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4930  FQTLL  4944
             FQ LL
Sbjct  70    FQSLL  74


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  110  GTHYL  96
            GT+YL
Sbjct  81   GTQYL  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1052  SSCYV  1038
             SSC+V
Sbjct  333   SSCFV  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1514  ETLNN  1500
             ETL N
Sbjct  2     ETLSN  6


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5482  LGNESNTF  5459
             L N S TF
Sbjct  4     LSNASGTF  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8744  ISTDLWMVL  8770
             IS  L MVL
Sbjct  35    ISSALAMVL  43


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2138  LALILL  2121
             LA++LL
Sbjct  39    LAMVLL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5224  MEPNPR  5207
             ME  PR
Sbjct  343   MESGPR  348


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5363  EESKK  5377
             EES K
Sbjct  126   EESRK  130


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6023  VLVN  6034
             VLVN
Sbjct  160   VLVN  163


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4259  IGQVRDQ  4279
             +G+VR Q
Sbjct  209   VGEVRAQ  215


>ref|NP_000869.1|  interleukin-2 receptor subunit beta precursor [Homo sapiens]
Length=551

 GENE ID: 3560 IL2RB | interleukin 2 receptor, beta [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 12/23 (52%)
 Frame = -2

Query  4845  WRLPDPNASLFLLYADPNMLLLP  4777
             WRLP       LL      LLLP
Sbjct  8     WRLP-------LL-----ILLLP  18


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3209  LPLLIVL  3189
             LPLLI L
Sbjct  10    LPLLILL  16


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  3830  WRAMA-SDF----NL  3859
             WR MA  DF    NL
Sbjct  116   WRVMAIQDFKPFENL  130


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  3907  LT--FITAGYYFF  3875
             LT  F   GY+FF
Sbjct  355   LTSCFTNQGYFFF  367


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  8679  TDQGYLVFF  8653
             T+QGY  FF
Sbjct  360   TNQGY--FF  366


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -3

Query  2090  LKCNQSESTDFF  2055
             LKCN  +   FF
Sbjct  278   LKCNTPDPSKFF  289


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4596  RWQVM  4610
             RW VM
Sbjct  115   RWRVM  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9152  LSSGFPS  9132
             LSS FPS
Sbjct  304   LSSPFPS  310


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  67   LSSGFPS  47
            LSS FPS
Sbjct  304  LSSPFPS  310


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3749  LIYLLV  3732
             L+YLL+
Sbjct  260   LVYLLI  265


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1453  EFVTW  1439
             EF TW
Sbjct  216   EFTTW  220


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6443  ILKCN  6457
             +LKCN
Sbjct  277   VLKCN  281


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  133  TRDPSDPFSQ  162
            T DPS  FSQ
Sbjct  282  TPDPSKFFSQ  291


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  731  PYSAEHP  751
            PYS E P
Sbjct  386  PYSEEDP  392


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5827  GAPSPP  5810
             G PSPP
Sbjct  436   GGPSPP  441


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6567  ARLPFN  6550
             ARLP N
Sbjct  527   ARLPLN  532


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3542  YLALQD  3559
             YL LQ+
Sbjct  536   YLSLQE  541


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3212  QKITTESIV  3238
             QK TT  IV
Sbjct  96    QKLTTVDIV  104


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = +2

Query  6761  CNISRAKW  6784
             CNIS   W
Sbjct  148   CNIS---W  152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -2

Query  9162  LLRLKQ---WV  9139
             LL LKQ   W+
Sbjct  183   LLTLKQKQEWI  193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  77   LLRLKQ---WV  54
            LL LKQ   W+
Sbjct  183  LLTLKQKQEWI  193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2321  DFRELNKR  2344
             +FR LN R
Sbjct  521   EFRALNAR  528


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5366  PLSSNAY  5346
             PL  +AY
Sbjct  530   PLNTDAY  536


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8440  AAPTLS  8423
             AAP LS
Sbjct  2     AAPALS  7


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9011  AWPGR  9025
             AWP R
Sbjct  63    AWPDR  67


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4185  RNLEF  4199
             R LEF
Sbjct  163   RHLEF  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1031  PWFSHL  1014
             PW  HL
Sbjct  242   PWLGHL  247


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6474  PLNVLLL  6454
             PL +LLL
Sbjct  11    PLLILLL  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8903  PPSISSRGPR  8932
             PPS   R PR
Sbjct  456   PPSLQERVPR  465


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8141  PTPCVPE  8121
             PTP VP+
Sbjct  475   PTPGVPD  481


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3468  LLIEEDK  3488
             LL ++DK
Sbjct  336   LLLQQDK  342


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1795  LPSGHSL  1815
             L S HSL
Sbjct  349   LSSNHSL  355


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2324  NLLIFS  2307
             +LL FS
Sbjct  426   DLLLFS  431


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3441  SLLAAPS  3421
             SLL  PS
Sbjct  433   SLLGGPS  439


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5429  LKLLVPI  5449
             L L+ PI
Sbjct  130   LRLMAPI  136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7910  PLSFQT  7927
             PL F T
Sbjct  226   PLAFRT  231


>sp|P40238.1|TPOR_HUMAN  RecName: Full=Thrombopoietin receptor; Short=TPO-R; AltName: 
Full=Myeloproliferative leukemia protein; AltName: Full=Proto-oncogene 
c-Mpl; AltName: CD_antigen=CD110; Flags: Precursor
Length=635

 GENE ID: 4352 MPL | myeloproliferative leukemia virus oncogene [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  2752  KTSERTSIPL  2781
             K SERT  PL
Sbjct  573   KSSERTPLPL  582


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5031  PSIVEILP  5008
             PS  EILP
Sbjct  565   PSLLEILP  572


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  5490  HNKSLRHLLW  5519
             H   LRH LW
Sbjct  520   HYRRLRHALW  529


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  8407  ELSQQQIGWEQ  8439
             EL   QI WE+
Sbjct  149   EL---QISWEE  156


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4131  LPLSVC  4114
             +PLSVC
Sbjct  602   MPLSVC  607


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3963  SCHIPGLQ  3940
             SC I GLQ
Sbjct  240   SCLISGLQ  247


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2310  LHLVL  2296
             LHLVL
Sbjct  498   LHLVL  502


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  9029  SP-AQATPPW  9003
             SP AQ T PW
Sbjct  209   SPCAQPTMPW  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 8/16 (50%)
 Frame = -2

Query  4527  ITTAP--------SPF  4504
             +TTAP        SPF
Sbjct  368   VTTAPGTVHSYLGSPF  383


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  5398  LEPWKHPGS  5424
             LE W HP S
Sbjct  408   LE-WQHPSS  415


 Score = 17.6 bits (34),  Expect(2) = 13319
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1531  PSLPQL  1514
             PSLP L
Sbjct  530   PSLPDL  535


 Score = 15.5 bits (29),  Expect(2) = 13319
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1622  SLSTIFHLV  1596
             SL T  HLV
Sbjct  493   SLVTALHLV  501


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 14/27 (51%)
 Frame = -2

Query  3486  CLPLLVTYPAFP-NL-------VSLLA  3430
             CL LL      P NL       VSLLA
Sbjct  12    CL-LLA-----PQNLAQVSSQDVSLLA  32


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4626  LLATQSSPAICF  4591
             LLA  S P  CF
Sbjct  30    LLASDSEPLKCF  41


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8020  RILGTYL  8040
             R+LG YL
Sbjct  537   RVLGQYL  543


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
 Frame = -2

Query  8157  QYLRASHPLRPRSSTI  8110
             QYLR    L P   T+
Sbjct  541   QYLRDTAALSPPKATV  556


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  471  VNPGLLE----TSE  500
            V P LLE     SE
Sbjct  563  VEPSLLEILPKSSE  576


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = +3

Query  5871  CGSQSIMGYLCGRK-QP  5918
             C SQ  M Y   R  QP
Sbjct  583   CSSQAQMDY---RRLQP  596


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9122  SSQAQ  9108
             SSQAQ
Sbjct  584   SSQAQ  588


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  37   SSQAQ  23
            SSQAQ
Sbjct  584  SSQAQ  588


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8461  CFSR  8450
             CFSR
Sbjct  40    CFSR  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3221  LFFALPL  3201
             LFF L L
Sbjct  103   LFFPLHL  109


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5135  VALGL  5121
             VALGL
Sbjct  285   VALGL  289


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8856  HAGSQG  8839
             HA SQG
Sbjct  308   HASSQG  313


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = -1

Query  1147  FNPR---IIHLL  1121
             F  R   IIH L
Sbjct  354   FKSRNDSIIHIL  365


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -3

Query  9050  SEGSPLP---SPAQ  9018
             SE  PLP   S AQ
Sbjct  575   SERTPLPLCSSQAQ  588


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7842  PPTII  7828
             PP II
Sbjct  135   PPSII  139


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7818  FIYHS  7804
             F YHS
Sbjct  314   FFYHS  318


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1734  VETTTPP  1754
             VE TT P
Sbjct  366   VEVTTAP  372


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +1

Query  3352  PSLSEIMVPVRERT  3393
             PSL EI+    ERT
Sbjct  565   PSLLEILPKSSERT  578


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3723  PIPLC  3709
             P PLC
Sbjct  579   PLPLC  583


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1543  LAVCP  1529
             L VCP
Sbjct  604   LSVCP  608


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2437  CITHI  2423
             C THI
Sbjct  617   CTTHI  621


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6361  VTTCQLIA  6338
             VT C L A
Sbjct  9     VTSCLLLA  16


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6446  LKCNNKTF  6469
             LKC   TF
Sbjct  38    LKCFSRTF  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7338  WEQQEA  7355
             W+++EA
Sbjct  52    WDEEEA  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7528  PKGSTAP  7548
             PK ST P
Sbjct  176   PKNSTGP  182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4188  SCLI  4177
             SCLI
Sbjct  240   SCLI  243


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7169  SRTHCC  7152
             SR  CC
Sbjct  318   SRARCC  323


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5276  EAIIRIL  5296
             + II IL
Sbjct  359   DSIIHIL  365


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  524  LSQYL  510
            L QYL
Sbjct  539  LGQYL  543


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  181  LLEI  170
            LLEI
Sbjct  567  LLEI  570


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3939  STCPCMA  3919
             S CP MA
Sbjct  605   SVCPPMA  611


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6086  EDIISLWDQ  6112
             ED    WD+
Sbjct  46    EDLTCFWDE  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3770  VLFLD  3784
             VLF D
Sbjct  124   VLFVD  128


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8637  LPVPP  8623
             LP PP
Sbjct  132   LPAPP  136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4132  QFHRC  4146
             QF RC
Sbjct  348   QFSRC  352


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7335  SWEQQE  7352
             SW  QE
Sbjct  415   SWAAQE  420


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4152  LGPPVGGR  4175
             L PP G R
Sbjct  438   LEPPLGAR  445


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4049  ETGQETA  4069
             ET  ETA
Sbjct  484   ETATETA  490


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1947  LEVLSK  1964
             LE+L K
Sbjct  568   LEILPK  573


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  2022  TVPIALCP  1999
             T P   CP
Sbjct  601   TMPLSVCP  608


>ref|NP_057371.2|  heterochromatin protein 1-binding protein 3 [Homo sapiens]
Length=553

 GENE ID: 50809 HP1BP3 | heterochromatin protein 1, binding protein 3
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -1

Query  9025  PPRPRLPGKSPAESP  8981
             PP  RL  K PA SP
Sbjct  452   PPKRRLQKKTPAKSP  466


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +1

Query  6697  PERTRESICYNRKNR  6741
             P+  R     NRKNR
Sbjct  238   PQKSR-----NRKNR  247


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 4/21 (19%)
 Frame = +3

Query  1200  PKEP----FRDYVDRFYKTLR  1250
             PKE      R YV  +Y  LR
Sbjct  273   PKEASYSLIRKYVSQYYPKLR  293


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = +3

Query  7710  KNRKTSKKRMN-KN  7748
             K RKT  K  N KN
Sbjct  233   KSRKTPQKSRNRKN  246


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +3

Query  8703  FPD*QNYTPGPGVRYP  8750
             FP    Y P PGV +P
Sbjct  413   FP----YYPSPGVLFP  424


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +1

Query  5731  LI--DRLIERAEDS  5766
             LI  D L E  EDS
Sbjct  24    LIHADKLGEKVEDS  37


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5357  STEESKK  5377
             S EE KK
Sbjct  110   SSEETKK  116


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  717  VSQNYP  734
            VSQ YP
Sbjct  285  VSQYYP  290


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 10/27 (37%)
 Frame = +3

Query  1692  PEPTAPPEESFRSGV------ETTTPP  1754
             PEP    EES    V      E  TPP
Sbjct  65    PEPDISSEES----VSTVEEQENETPP  87


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +1

Query  8644  FT----PKEDKISLI  8676
             FT    PKE   SLI
Sbjct  267   FTRLCEPKEASYSLI  281


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  750  QGQMVHQAISPRTL  791
            QG++VH    P  L
Sbjct  7    QGELVH----PKAL  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4719  ESPHPRISSE  4748
             E P P ISSE
Sbjct  63    EKPEPDISSE  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  6363  PQ----SLHRPVQR  6392
             PQ     L+R V+R
Sbjct  298   PQLLKNALQRAVER  311


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5937  QMLKHMIQR  5963
             Q+LK   QR
Sbjct  299   QLLKNALQR  307


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4289  LKTAVQMAV  4315
             LK A Q AV
Sbjct  301   LKNALQRAV  309


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1736  YPRPEALF  1713
             YP P  LF
Sbjct  416   YPSPGVLF  423


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8633  GRANSLPKK  8659
             G A  LPKK
Sbjct  489   GKARPLPKK  497


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7935  QPRGDP  7952
             QP G+P
Sbjct  95    QPKGEP  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9181  EALKASF  9161
             EA KA F
Sbjct  167   EAIKACF  173


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  96   EALKASF  76
            EA KA F
Sbjct  167  EAIKACF  173


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  6002  DPNPQ---EVVL  6028
             DP PQ   E VL
Sbjct  252   DPEPQVKLEDVL  263


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  4410  SLVCMSVAIMSTI  4372
             SL  M  AI+S I
Sbjct  340   SL--MEYAILSAI  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  746  HPGAN  760
            HPG N
Sbjct  372  HPGTN  376


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  450  RELER  464
            REL R
Sbjct  209  RELNR  213


>pdb|1J8H|E  Chain E, Crystal Structure Of A Complex Of A Human AlphaBETA-T 
Cell Receptor, Influenza Ha Antigen Peptide, And Mhc Class 
Ii Molecule, Hla-Dr4
Length=246


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            VVE+  K F PEV
Sbjct  111  VVEDLNKVFPPEV  123


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  67    REKKE  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5968  MYLC  5957
             MYLC
Sbjct  87    MYLC  90


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  163   EVHSG------VSTDPQP  174


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  215   LSENDEWT  222


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  64    SVSRE  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4223  VVESMNK  4243
             VVE +NK
Sbjct  111   VVEDLNK  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  129   SEAEIS  134


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = +2

Query  6206  RMI-------M-EKGEI  6232
             R+I       M EKG+I
Sbjct  43    RLIYFSYDVKMKEKGDI  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  234  DAGLGL  251
            D GLGL
Sbjct  37   DPGLGL  42


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  5012  RISTILGTSSINNT  5053
             R S IL   S N T
Sbjct  72    RFSLILESASTNQT  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7103  CSSNITGL  7126
             C S  TGL
Sbjct  90    CASSSTGL  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS Y L
Sbjct  183   DSRYSL  188


>ref|NP_002407.1|  C-X-C motif chemokine 9 precursor [Homo sapiens]
 sp|Q07325.1|CXCL9_HUMAN  RecName: Full=C-X-C motif chemokine 9; AltName: Full=Small-inducible 
cytokine B9; AltName: Full=Gamma-interferon-induced 
monokine; AltName: Full=MIG; Flags: Precursor
Length=125

 GENE ID: 4283 CXCL9 | chemokine (C-X-C motif) ligand 9 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.5 bits (48),  Expect =   302
 Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 17/36 (47%)
 Frame = +2

Query  4367  ERIVDIIAT---DIQT---------KEL----QKQI  4426
             E I +IIAT    +QT         KEL    +KQ+
Sbjct  59    EKI-EIIATLKNGVQTCLNPDSADVKELIKKWEKQV  93


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7599  QGTAVV  7582
             QGT VV
Sbjct  21    QGTPVV  26


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  2514  GVSLFILGMV  2485
             GV LF LG +
Sbjct  5     GV-LFLLGII  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  8724  CS--SANQG  8704
             CS  S NQG
Sbjct  31    CSCISTNQG  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  3823  VIFLMFILGLI  3791
             V FL   LG I
Sbjct  6     VLFL---LGII  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  7067  LFLL  7056
             LFLL
Sbjct  7     LFLL  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  714  QVSQ  725
            QVSQ
Sbjct  92   QVSQ  95


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2544  HRDGKDHQ  2567
             + +GK HQ
Sbjct  99    QKNGKKHQ  106


>pdb|1OGA|E  Chain E, A Structural Basis For Immunodominant Human T-Cell Receptor 
Recognition.
Length=252


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect(2) =   320
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  48    IYYSQIV--NDFQK  59


 Score = 18.0 bits (35),  Expect(2) =   320
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7673  FLCPTPSRS  7647
             +LC   SRS
Sbjct  91    YLCASSSRS  99


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  45    LR-----LIYYSQIV  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  70    REKKE  74


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  165   EVHSG------VSTDPQP  176


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  54    VNDFQK  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  217   LSENDEWT  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  67    SVSRE  71


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  131   SEAEIS  136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS Y L
Sbjct  185   DSRYSL  190


>pdb|2VLJ|E  Chain E, The Structural Dynamics And Energetics Of An Immunodominant 
T-Cell Receptor Are Programmed By Its Vbeta Domain
 pdb|2VLK|E  Chain E, The Structural Dynamics And Energetics Of An Immunodominant 
T-Cell Receptor Are Programmed By Its Vbeta Domain
 pdb|2VLM|E  Chain E, The Structural Dynamics And Energetics Of An Immunodominant 
T-Cell Receptor Are Programmed By Its Vbeta Domain
Length=244


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect(2) =   322
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  48    IYYSQIV--NDFQK  59


 Score = 18.0 bits (35),  Expect(2) =   322
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7673  FLCPTPSRS  7647
             +LC   SRS
Sbjct  91    YLCASSSRS  99


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  45    LR-----LIYYSQIV  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  70    REKKE  74


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  165   EVHSG------VSTDPQP  176


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  54    VNDFQK  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  217   LSENDEWT  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  67    SVSRE  71


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  131   SEAEIS  136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS Y L
Sbjct  185   DSRYSL  190


>sp|P10643.2|CO7_HUMAN  RecName: Full=Complement component C7; Flags: Precursor
Length=843

 GENE ID: 730 C7 | complement component 7 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.0 bits (42),  Expect(2) =   328
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6956  FNSTWS  6973
             +NSTWS
Sbjct  201   YNSTWS  206


 Score = 19.3 bits (38),  Expect(2) =   328
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 10/20 (50%)
 Frame = +2

Query  6896  FNCGGEFFYCNSTQLFNSTW  6955
             FN   EF+        NSTW
Sbjct  196   FNY--EFY--------NSTW  205


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5461  FYNSNW  5444
             FYNS W
Sbjct  200   FYNSTW  205


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -2

Query  411  FPLAL--TEF  388
            FPL L  TEF
Sbjct  561  FPLSLVPTEF  570


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  128  RVTQQTGTHYL  96
            R   Q GTHYL
Sbjct  294  RLIDQYGTHYL  304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8177  WSQELKN  8197
             WS E+KN
Sbjct  679   WSPEMKN  685


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2511  VSLFIL  2494
             +SLFIL
Sbjct  4     ISLFIL  9


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  52   GTHCL  66
            GTHCL
Sbjct  470  GTHCL  474


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9137  GTHCL  9151
             GTHCL
Sbjct  470   GTHCL  474


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4131  LPLSVC  4114
             LPL VC
Sbjct  738   LPLTVC  743


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 0/20 (0%)
 Frame = +2

Query  977   SASSACRAYCTRPDERTKGK  1036
             S SS  R Y    +E  KGK
Sbjct  227   SSSSSSRSYTSHTNEIHKGK  246


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7424  QNNLLR  7441
             QNN LR
Sbjct  367   QNNVLR  372


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8098  DCNED  8112
             DC+ED
Sbjct  108   DCDED  112


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  378  RWEK  389
            RWEK
Sbjct  704  RWEK  707


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1499  LSLVP  1485
             LSLVP
Sbjct  563   LSLVP  567


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3299  TMFP  3288
             TMFP
Sbjct  587   TMFP  590


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3413  FYVD  3424
             FYVD
Sbjct  317   FYVD  320


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6393  TFGQAC  6376
             TFG AC
Sbjct  481   TFGAAC  486


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8401  ILSLTV  8384
             IL LTV
Sbjct  737   ILPLTV  742


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7195  HISSSR  7178
             H SSSR
Sbjct  215   HTSSSR  220


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  135  SYQSHT  118
            SY SHT
Sbjct  234  SYTSHT  239


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  5348  RRYST-EES  5371
             RRYS   ES
Sbjct  401   RRYSAWAES  409


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2086  SATNLSQQI  2060
             S TNL Q I
Sbjct  409   SVTNLPQVI  417


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3029  LLESLCF  3009
             LLE  CF
Sbjct  555   LLEPHCF  561


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5887  LWGTC  5901
             LWG C
Sbjct  778   LWGKC  782


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 6/16 (37%)
 Frame = +1

Query  7174  QTWRR------RYEGQ  7203
             QT RR       Y GQ
Sbjct  46    QTRRRSVAVYGQYGGQ  61


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5243  YETYGDTW  5266
             YE Y  TW
Sbjct  198   YEFYNSTW  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6851  RLLFY  6837
             R LFY
Sbjct  314   RVLFY  318


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/30 (33%), Positives = 12/30 (40%), Gaps = 15/30 (50%)
 Frame = +2

Query  3653  QIIEQ-------LIKKE-------KVYLAW  3700
             Q+I Q       L+K E       K YL W
Sbjct  415   QVIKQKLTPLYELVK-EVPCASVKKLYLKW  443


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2026  SRTYT  2040
             SR YT
Sbjct  232   SRSYT  236


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4857  KKRYS  4871
             K RYS
Sbjct  400   KRRYS  404


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4570  CFSSW  4556
             C SSW
Sbjct  505   CWSSW  509


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1016  DERTK  1030
             DER K
Sbjct  731   DERSK  735


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4926  CFSDSAIRKAL  4958
             CFS   I K L
Sbjct  91    CFSGQCISKSL  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1211  GFLWSLSY  1188
             GF   LSY
Sbjct  383   GFISGLSY  390


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4646  CSNPHP  4629
             C NP P
Sbjct  523   CNNPPP  528


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  4171  PPTGGPNRS-TGE  4136
             PP GG  RS  GE
Sbjct  527   PPSGG-GRSCVGE  538


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2223  FSISVQI  2203
             FSI V++
Sbjct  802   FSICVEV  808


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6488  YMVLF  6474
             Y VLF
Sbjct  313   YRVLF  317


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3910  KRRSHAW  3930
             KRR  AW
Sbjct  400   KRRYSAW  406


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1358  SRWSQC  1341
             S WS C
Sbjct  507   SSWSPC  512


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  663  CFALPL  646
            CF L L
Sbjct  560  CFPLSL  565


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  5120  LGLVPSILC  5094
             L LVP   C
Sbjct  563   LSLVPTEFC  571


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1351  GPNAF  1337
             GP AF
Sbjct  667   GPSAF  671


>pdb|3L5W|L  Chain L, Crystal Structure Of The Complex Between Il-13 And C836 
Fab
 pdb|3L5W|A  Chain A, Crystal Structure Of The Complex Between Il-13 And C836 
Fab
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   329
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  7004  DTITLPCR  7027
             +TITL CR
Sbjct  17    ETITLNCR  24


 Score = 19.3 bits (38),  Expect(2) =   329
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             ++TQSPS
Sbjct  3     QITQSPS  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = +1

Query  2179  RKNKSISRNL--YRD--GK  2223
             R  KSIS  L  Y +  GK
Sbjct  24    RASKSISKYLAWYQEKPGK  42


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3557  PAKLDKLLV  3531
             P K +KLL+
Sbjct  40    PGKTNKLLI  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2321  LLIFS  2307
             LLI+S
Sbjct  46    LLIYS  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = -1

Query  8872  SGSS----IPCRLTG  8840
             SGS     IP R  G
Sbjct  50    SGSTLQSGIPSRFSG  64


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  961  LQNGI  975
            LQ GI
Sbjct  54   LQSGI  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>ref|NP_848697.1|  minor histocompatibility antigen H13 isoform 4 [Homo sapiens]
Length=143

 GENE ID: 81502 HM13 | histocompatibility (minor) 13 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(3) =   342
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -1

Query  4651  FHVL-ILILSTCHTI  4610
             F VL IL LS  HTI
Sbjct  109   FFVLGILALS--HTI  121


 Score = 19.3 bits (38),  Expect(3) =   342
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  4821  SLFLLYADPNMLLLPI  4774
             SL LL     M LLPI
Sbjct  38    SL-LL-----MALLPI  47


 Score = 17.6 bits (34),  Expect(3) =   342
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4755  CVLLNLFL  4732
             C LL L+L
Sbjct  84    CTLLGLYL  91


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 14/49 (28%), Positives = 14/49 (28%), Gaps = 28/49 (57%)
 Frame = +1

Query  2437  IFFSSLR*RLQEVYCIYHT*YKQ*DTRD*ISVQCA----STGM-ERITS  2568
             IFF  LR                       SV CA       M E ITS
Sbjct  47    IFFGALR-----------------------SVRCARGKNASDMPETITS  72


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  424  LYFFFPPGLNRIFSH  380
            LY FF      IFS+
Sbjct  89   LYLFF-----KIFSQ  98


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4870  LYLFF  4856
             LYLFF
Sbjct  89    LYLFF  93


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7927  PPPNPEG  7947
             PP  PEG
Sbjct  25    PPSTPEG  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5899  RYPII  5885
             R+PII
Sbjct  77    RFPII  81


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9092  RDPVQ  9078
             R+PVQ
Sbjct  136   REPVQ  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6096  IISSC  6082
             II SC
Sbjct  80    IIASC  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1570  PFFLGAL  1550
             P F GAL
Sbjct  46    PIFFGAL  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7457  QHLLQL  7474
             QHL QL
Sbjct  129   QHLKQL  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = +2

Query  3023  LK----EPVHG  3043
             LK    EPV+G
Sbjct  131   LKQLSREPVQG  141


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  44   LTREP  58
            L REP
Sbjct  134  LSREP  138


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9129  LTREP  9143
             L REP
Sbjct  134   LSREP  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6619  HNSTAE  6636
             HN  AE
Sbjct  9     HNGSAE  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LL+ LL
Sbjct  40    LLMALL  45


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/20 (30%), Positives = 6/20 (30%), Gaps = 14/20 (70%)
 Frame = -1

Query  3934  LSMHGFSF*LTFITAGYYFF  3875
             LSM              YFF
Sbjct  105   LSM--------------YFF  110


>gb|AAC43026.1|  anti-mucin1 light chain variable region [Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect(2) =   372
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 7/25 (28%)
 Frame = +2

Query  7007  TITLPCRIKQIIN--M-W--QKVGK  7066
             TIT  CR  Q IN  + W  QK GK
Sbjct  20    TIT--CRASQTINNYLNWYQQKPGK  42


 Score = 18.0 bits (35),  Expect(2) =   372
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWY Q
Sbjct  34    NWYQQ  38


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  1032  GSDIAGTTSTLQ  1067
             G D   T STLQ
Sbjct  68    GTDFTLTISTLQ  79


>gb|AAY33375.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect(2) =   372
 Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 13/34 (38%)
 Frame = +2

Query  7007  TITLPCRIKQII----NMW--QKVGKA----MYA  7078
             TIT  CR  Q I    N W  QK GKA     YA
Sbjct  20    TIT--CRASQSISSYLN-WYRQKPGKAPKLLIYA  50


 Score = 18.0 bits (35),  Expect(2) =   372
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWY Q
Sbjct  34    NWYRQ  38


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5877  SQSIMGYL  5900
             SQSI  YL
Sbjct  26    SQSISSYL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>emb|CAB59387.1|  T cell receptor beta chain variable region [Homo sapiens]
Length=87


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   386
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = +1

Query  7381  DGTGQTIIVWYSAAAEQFAEG  7443
             DGTG TI   Y      F EG
Sbjct  75    DGTGNTI---Y------FGEG  86


 Score = 19.3 bits (38),  Expect(2) =   386
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  47    REKKE  51


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  25    IYYSQIV--NDFQK  36


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  22    LR-----LIYYSQIV  31


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  31    VNDFQK  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  44    SVSRE  48


>ref|NP_000619.3|  interleukin-10 receptor subunit beta precursor [Homo sapiens]
Length=325

 GENE ID: 3588 IL10RB | interleukin 10 receptor, beta [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.8 bits (44),  Expect(2) =   391
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  2911  WVNLT-CPI  2888
             WVN T CP+
Sbjct  100   WVNITFCPV  108


 Score = 18.5 bits (36),  Expect(2) =   391
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  2777  GM--EVLSD  2757
             GM  EVL D
Sbjct  117   GMQVEVLAD  125


 Score = 23.1 bits (47),  Expect =   406
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 4/25 (16%)
 Frame = -3

Query  2465  SL--HLRELKNMHHPHPVLLLIFSF  2397
             SL  HL E   + HPH   LL FSF
Sbjct  261   SLPQHLKEF--LGHPHHNTLLFFSF  283


 Score = 22.3 bits (45),  Expect =   731
 Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 14/32 (43%)
 Frame = -2

Query  5838  PRSMVP-HL-----HPH----LHKC*YFSFTL  5773
             PR   P HL     HPH    L    +FSF L
Sbjct  258   PRNSLPQHLKEFLGHPHHNTLL----FFSFPL  285


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 7/24 (29%)
 Frame = +1

Query  157  SQCGK-------SLAVAPEQGPES  207
            S+ GK       SL   P QGP+S
Sbjct  302  SESGKQNPGDSCSLGTPPGQGPQS  325


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  417  FSFPL  403
            FSFPL
Sbjct  281  FSFPL  285


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  663  CFALPLSCLKLPWC  622
            C AL L C  L WC
Sbjct  235  CLAL-LGCFALLWC  247


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4736  SWMRAFIVM  4710
             SWM A I M
Sbjct  220   SWMVAVILM  228


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3221  LFFALPL  3201
             LFF  PL
Sbjct  279   LFFSFPL  285


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3905  DIYHSW  3888
             ++Y SW
Sbjct  147   NVYNSW  152


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  8316  CLILLG----MW  8293
             CL LLG    +W
Sbjct  235   CLALLGCFALLW  246


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = -3

Query  7079  GH----TLLF  7062
             GH    TLLF
Sbjct  271   GHPHHNTLLF  280


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4589  GKQMAGDDC  4615
             GKQ  GD C
Sbjct  305   GKQNPGDSC  313


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2152  WAIHSWL  2132
             W   SWL
Sbjct  3     WSLGSWL  9


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5120  LGLVP  5106
             LG+VP
Sbjct  18    LGMVP  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6168  SVHFK  6154
             SV FK
Sbjct  31    SVNFK  35


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1784  QFLVYR  1767
             Q+L YR
Sbjct  55    QYLSYR  60


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  171  FSTLTK  154
            FS L K
Sbjct  76   FSSLSK  81


>ref|NP_604393.2|  NACHT, LRR and PYD domains-containing protein 4 [Homo sapiens]
Length=994

 GENE ID: 147945 NLRP4 | NLR family, pyrin domain containing 4 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect(2) =   401
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  2872  LLYVIDS  2852
             LL+VIDS
Sbjct  226   LLFVIDS  232


 Score = 17.6 bits (34),  Expect(2) =   401
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 11/28 (39%)
 Frame = -1

Query  2743  CG----KSPPQQMLSQLL---YFCSMLP  2681
             CG    K P Q +LS LL       MLP
Sbjct  248   CGDLMEKRPVQVLLSSLLRKK----MLP  271


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8042  DDLRSLC  8062
             DD RSLC
Sbjct  709   DDIRSLC  715


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  5171  LEELKNEAVRHF  5206
             LEELK E  R F
Sbjct  15    LEELKKEEFRKF  26


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +3

Query  426  LKHIVW-----ASRE  455
            LK+I W     ASRE
Sbjct  39   LKQIPWTEVKKASRE  53


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = -1

Query  3838  CSPITV-IFLM  3809
             CSP TV ++LM
Sbjct  775   CSPDTVLVYLM  785


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 14/35 (40%)
 Frame = -3

Query  1433  CFS-QN--------SCLMAGSSYSLTCCHHFF*CS  1356
             CFS QN        S     S YSL C HH   CS
Sbjct  603   CFSVQNVFKKEDEHS---STSDYSLICWHHI--CS  632


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1685  LKKIPW  1668
             LK IPW
Sbjct  39    LKQIPW  44


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  7640  SKSVPEI--YY  7614
             SKSV EI  Y+
Sbjct  113   SKSVTEIHLYF  123


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 7/19 (36%)
 Frame = +3

Query  825  FSPEVIPMFSALSEGATPQ  881
            F PE         EG TPQ
Sbjct  380  FTPEG-------AEGPTPQ  391


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -3

Query  7562  NPKSPGAVDPLGIF  7521
             NP   G VD L IF
Sbjct  543   NPQ--GQVDSLAIF  554


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             HLREL
Sbjct  639   HLREL  643


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 22/40 (55%)
 Frame = -3

Query  2447  LKNMH--HPHPVL-----LL------------IF--SFLT  2391
             LK  H  HPHP       LL            IF   FLT
Sbjct  466   LKS-HLDHPHPAVRCVQELLVANFEKARRAHWIFLGCFLT  504


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1045  QELLV  1059
             QELLV
Sbjct  481   QELLV  485


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2459  EDFRKY  2476
             E+FRK+
Sbjct  21    EEFRKF  26


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  725  LADLI  711
            LADLI
Sbjct  201  LADLI  205


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/28 (35%), Positives = 12/28 (42%), Gaps = 15/28 (53%)
 Frame = +3

Query  1686  SR--PEPTAP-------PE------ESF  1724
             SR  P+P AP       PE      +SF
Sbjct  206   SREWPDPAAPITEIVSQPERLLFVIDSF  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5790  YFSFTL  5773
             Y SFTL
Sbjct  698   YLSFTL  703


 Score = 16.8 bits (32),  Expect(2) = 11247
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +3

Query  4032  QKL-----FQQKQGRKQHI  4073
             +KL     FQ  Q  KQ+I
Sbjct  513   EKLDAFFGFQLSQEIKQQI  531


 Score = 16.3 bits (31),  Expect(2) = 11247
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4129  QQFHRC  4146
             QQ H C
Sbjct  529   QQIHQC  534


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4915  ITLTVFQ  4935
             ITL +FQ
Sbjct  71    ITLRIFQ  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1077  LFVPEG  1060
             LF PEG
Sbjct  379   LFTPEG  384


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 5/23 (21%)
 Frame = +3

Query  4983  CEYQAG---HNKVGSLQYLALAA  5042
             CEY       NK  S  YL L A
Sbjct  796   CEYISEMLLRNK--SVRYLDLSA  816


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2707  LLYFC  2693
             L YFC
Sbjct  308   LVYFC  312


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 10/18 (55%)
 Frame = -2

Query  7302  LFS----------LCTTL  7279
             LFS          LCT L
Sbjct  334   LFSICQIPLLCWILCTSL  351


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6143  LCVSLK  6160
             LC SLK
Sbjct  347   LCTSLK  352


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  7483  PDCELQQML-LR  7451
             P+C L Q L LR
Sbjct  948   PECAL-QVLGLR  958


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4406  KELQKQIT  4429
             KEL  Q+T
Sbjct  285   KELRDQVT  292


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +1

Query  1477  AILGTK------ER  1500
             A LGTK      ER
Sbjct  431   ALLGTKILLKYGER  444


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8807  LFYL  8796
             LFYL
Sbjct  462   LFYL  465


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5353  LLDRGEQE  5376
             LL+  EQE
Sbjct  506   LLNKKEQE  513


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1503  VKCF  1514
             VKCF
Sbjct  844   VKCF  847


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  8781  VLACS-TIQ  8758
             VL CS T Q
Sbjct  916   VLTCSKTLQ  924


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7471  LQQMLLRLN  7445
             LQQ+ L LN
Sbjct  923   LQQLNLTLN  931


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1298  QGFCHPIFY  1272
             Q FC   FY
Sbjct  456   QEFCAALFY  464


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/18 (38%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = -1

Query  2860  IDSPAVFFWQHYRLYCPF  2807
             +DS A+F       YC F
Sbjct  548   VDSLAIF-------YCLF  558


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  1633  KLACLSVQ  1610
             KL C SVQ
Sbjct  601   KL-CFSVQ  607


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3026  LESLC  3012
             L+SLC
Sbjct  838   LDSLC  842


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6083  ASVLPC  6066
             ASVL C
Sbjct  914   ASVLTC  919


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  879  QDLNTMLNT  905
            Q LN  LNT
Sbjct  924  QQLNLTLNT  932


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8644  FTPKE  8658
             F PKE
Sbjct  139   FAPKE  143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5299  TTAVY  5313
             TT VY
Sbjct  368   TTSVY  372


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5196  LDIFLGF  5216
             LD F GF
Sbjct  515   LDAFFGF  521


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8825  VLSFIGLFY  8799
             VL F  LFY
Sbjct  684   VLLFEVLFY  692


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2586  MLLWN  2572
             MLL N
Sbjct  802   MLLRN  806


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5493  NKSLRHL  5513
             NKS R L
Sbjct  806   NKSVRYL  812


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6045  ILTCGK  6062
             +LTC K
Sbjct  916   VLTCSK  921


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6782  WNNTL  6796
             WN TL
Sbjct  69    WNITL  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5780  KEKYQHLW  5803
             K+K+  LW
Sbjct  104   KQKFSRLW  111


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3077  LLLSLLM  3057
             LL+ L+M
Sbjct  164   LLMKLMM  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  5090  FRNTRQRWLYLF  5055
             FR+   R LY F
Sbjct  178   FRD---RFLYTF  186


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1079  SYLFL  1065
             SY FL
Sbjct  447   SYVFL  451


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7342  SQEPKEQ  7322
             SQE K+Q
Sbjct  524   SQEIKQQ  530


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3926  HGQVD  3940
             +GQVD
Sbjct  545   QGQVD  549


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  4327  IVDEYCHL-YC  4298
             +V  YC L YC
Sbjct  587   VVSAYC-LKYC  596


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4126  IVSMYC  4109
             +VS YC
Sbjct  587   VVSAYC  592


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  6813  LLAICFKVLF  6784
             LL   F VLF
Sbjct  685   LL---FEVLF  691


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  1636  KKLACLSV  1613
             KKL  L V
Sbjct  751   KKLTYLNV  758


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8432  HPICC  8418
             HP CC
Sbjct  833   HPDCC  837


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4022  YIEAEV  4039
             Y E EV
Sbjct  122   YFEEEV  127


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6597  LTDLI  6583
             L DLI
Sbjct  201   LADLI  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7890  LFTIES  7873
             LF I+S
Sbjct  227   LFVIDS  232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  4469  FCC  4461
             FCC
Sbjct  311   FCC  313


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +1

Query  5464  CCF  5472
             CCF
Sbjct  312   CCF  314


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3123  KSHL  3134
             KSHL
Sbjct  467   KSHL  470


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4990  IKQDI  5004
             IKQ I
Sbjct  527   IKQQI  531


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6629  QLNTSV  6646
             QL+T V
Sbjct  762   QLDTGV  767


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7674  LTIT  7685
             LTIT
Sbjct  980   LTIT  983


>pdb|3KGR|A  Chain A, Crystal Structure Of The Human Leukocyte-Associated 
Ig-Like Receptor-1 (Lair-1)
 pdb|3KGR|B  Chain B, Crystal Structure Of The Human Leukocyte-Associated 
Ig-Like Receptor-1 (Lair-1)
 pdb|3KGR|C  Chain C, Crystal Structure Of The Human Leukocyte-Associated 
Ig-Like Receptor-1 (Lair-1)
Length=106


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  4725  PHPRISSE---VHIPLG  4766
             P P IS E   V IPLG
Sbjct  8     PRPSISAEPGTV-IPLG  23


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7550  PGAVDPLG  7527
             PG V PLG
Sbjct  16    PGTVIPLG  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = +1

Query  2479  CIYHT*YK  2502
             CIY   YK
Sbjct  82    CIY---YK  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3044  VYYDPSK  3064
             +YY P K
Sbjct  83    IYYKPPK  89


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  9104  WSNQRD  9087
             WS Q D
Sbjct  90    WSEQSD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  19  WSNQRD  2
           WS Q D
Sbjct  90  WSEQSD  95


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5249  TYGDT  5263
             TY DT
Sbjct  48    TYNDT  52


>pdb|3HUP|A  Chain A, High-Resolution Structure Of The Extracellular Domain 
Of Human Cd69
 pdb|3HUP|B  Chain B, High-Resolution Structure Of The Extracellular Domain 
Of Human Cd69
Length=130


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7781  NWFNIT  7798
             NWFN+T
Sbjct  94    NWFNVT  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4033  CFYIST  4016
             C++IST
Sbjct  27    CYFIST  32


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3387  FSNWY  3373
             F NW+
Sbjct  92    FNNWF  96


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3693  WHGYQ  3707
             W GYQ
Sbjct  20    WVGYQ  24


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2920  FNPWVNLT  2897
             FN W N T
Sbjct  92    FNNWFNVT  99


>pdb|3D18|A  Chain A, Crystal Structure Of Hla-B2709 Complexed With A Variant 
Of The Latent Membrane Protein 2 Peptide (Lmp2(L)) Of Epstein- 
Barr Virus
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  540  QTGSEELRSL---YN  575
            QT  E+LR L   YN
Sbjct  72   QTDREDLRTLLRYYN  86


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DLR L
Sbjct  76    EDLRTL  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  11    SVSRPGRGE  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


>pdb|3EO9|L  Chain L, Crystal Structure The Fab Fragment Of Efalizumab
 pdb|3EOA|L  Chain L, Crystal Structure The Fab Fragment Of Efalizumab In 
Complex With Lfa-1 I Domain, Form I
 pdb|3EOA|A  Chain A, Crystal Structure The Fab Fragment Of Efalizumab In 
Complex With Lfa-1 I Domain, Form I
 pdb|3EOB|L  Chain L, Crystal Structure The Fab Fragment Of Efalizumab In 
Complex With Lfa-1 I Domain, Form Ii
 pdb|3EOB|A  Chain A, Crystal Structure The Fab Fragment Of Efalizumab In 
Complex With Lfa-1 I Domain, Form Ii
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2321  LLIFS  2307
             LLI+S
Sbjct  46    LLIYS  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>pdb|3FXI|A  Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli 
Lps Ra Complex
 pdb|3FXI|B  Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli 
Lps Ra Complex
Length=605


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/13 (53%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = -3

Query  2405  FS-FLTLRDVVFL  2370
             FS FL LR+ ++L
Sbjct  414   FSVFLSLRNLIYL  426


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  6041  LSHLPILLLVG  6009
             LSHL  L L G
Sbjct  75    LSHLSTLILTG  85


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8954  LEVLRM  8937
             LEVL M
Sbjct  447   LEVLKM  452


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8940  PEYFKN  8957
             PEYF N
Sbjct  142   PEYFSN  147


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8873  LRVIHPM  8853
             LRV H M
Sbjct  169   LRVLHQM  175


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7189  RYEGQLEK  7212
             R EG LEK
Sbjct  238   RNEGNLEK  245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3125  LDKFDMS  3105
             L+KFD S
Sbjct  243   LEKFDKS  249


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1290  LSSNFL  1273
             +SSNFL
Sbjct  388   MSSNFL  393


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3821  DISHVH  3804
             DISH H
Sbjct  427   DISHTH  432


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4643  NMEKFSK  4663
             N+EKF K
Sbjct  242   NLEKFDK  248


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5977  PNIMYLC  5957
             PNI Y C
Sbjct  8     PNITYQC  14


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3990  TFPSKCVQS  3964
             TFP KC  S
Sbjct  511   TFPYKCLNS  519


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = +3

Query  420  YKLKHIVWASR--ELERF  467
            Y L HI   S   EL+ F
Sbjct  525  YSLNHIM-TSKKQELQHF  541


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3179  CGHPSFLH  3156
             C H SFL+
Sbjct  559   CEHQSFLQ  566


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  4585  IPNDLCFS  4562
             IP++L FS
Sbjct  22    IPDNLPFS  29


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             KLV VE
Sbjct  104   KLVAVE  109


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  155  LVSVE-NL  175
            LV VE NL
Sbjct  105  LVAVETNL  112


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +1

Query  7681  LHKLNTL  7701
             LHKL TL
Sbjct  202   LHKL-TL  207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 9/26 (34%)
 Frame = -1

Query  7060  YFLPHVYNLFYSAWEGDC---VTSFS  6992
             Y+L  + +LF      +C   V SFS
Sbjct  269   YYLDDIIDLF------NCLTNVSSFS  288


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/18 (38%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = -1

Query  7498  EL-----LDAPDCELQQM  7460
             EL     LD   C+L+Q+
Sbjct  468   ELRNLTFLDLSQCQLEQL  485


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 6/25 (24%)
 Frame = -2

Query  8802  LSYLAQLVLACSTIQRSVDI*PLAL  8728
             LS L  L+L    IQ       LAL
Sbjct  75    LSHLSTLILTGNPIQ------SLAL  93


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  224  PLVSLSL  204
            PL  LSL
Sbjct  176  PLLNLSL  182


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3343  KLPLRN  3326
             KL LRN
Sbjct  204   KLTLRN  209


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  2786  PS-K-GMEVLS  2760
             PS K GM VLS
Sbjct  586   PSDKQGMPVLS  596


 Score = 15.9 bits (30),  Expect(2) = 33581
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  2408  IFSFLT-LRDVVFL  2370
             IF   T LR+  FL
Sbjct  465   IF---TELRNLTFL  475


 Score = 15.1 bits (28),  Expect(2) = 33581
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2473  LPEVF  2459
             LP++F
Sbjct  462   LPDIF  466


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1415  CLMAGSSYSL  1386
             CL   SS+SL
Sbjct  280   CLTNVSSFSL  289


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/21 (33%), Positives = 9/21 (42%), Gaps = 10/21 (47%)
 Frame = -1

Query  6754  LSHISYFSYCNKCSPWSSLDT  6692
             +SH  +F          SLDT
Sbjct  501   MSHNNFF----------SLDT  511


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +3

Query  2733  DLPHQTKNIRKNLHSF  2780
             +LP  TKN   +L SF
Sbjct  25    NLPFSTKNL--DL-SF  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1476  GNFRNQ  1493
             G FRN+
Sbjct  235   GEFRNE  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8664  DILDL  8678
             DI DL
Sbjct  273   DIIDL  277


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3050  NTLHVL  3033
             N L+VL
Sbjct  518   NSLQVL  523


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8332  NPFQAL  8315
             NP Q L
Sbjct  86    NPIQSL  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2867  QKLV  2878
             QKLV
Sbjct  103   QKLV  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2699  IEELR  2713
             IEE R
Sbjct  259   IEEFR  263


>pdb|3FKU|X  Chain X, Crystal Structure Of Influenza Hemagglutinin (H5) In 
Complex With A Broadly Neutralizing Antibody F10
 pdb|3FKU|Y  Chain Y, Crystal Structure Of Influenza Hemagglutinin (H5) In 
Complex With A Broadly Neutralizing Antibody F10
 pdb|3FKU|Z  Chain Z, Crystal Structure Of Influenza Hemagglutinin (H5) In 
Complex With A Broadly Neutralizing Antibody F10
 pdb|3FKU|S  Chain S, Crystal Structure Of Influenza Hemagglutinin (H5) In 
Complex With A Broadly Neutralizing Antibody F10
 pdb|3FKU|T  Chain T, Crystal Structure Of Influenza Hemagglutinin (H5) In 
Complex With A Broadly Neutralizing Antibody F10
 pdb|3FKU|U  Chain U, Crystal Structure Of Influenza Hemagglutinin (H5) In 
Complex With A Broadly Neutralizing Antibody F10
Length=280


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +1

Query  8332  FAIRWV--ASGQ  8361
             FAI WV  A GQ
Sbjct  32    FAISWVRQAPGQ  43


 Score = 22.3 bits (45),  Expect =   731
 Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 18/44 (40%)
 Frame = -2

Query  8898  QTSTLTLLSPGHPSHAGSQGVTSWCSLLYW-------P--LLSY  8794
             QT TLT    G     G QG         W       P  LLSY
Sbjct  155   QTATLT--CTGNSNNVGNQGAA-------WLQQHQGHPPKLLSY  189


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7414  SAAAEQ  7431
             SAAAEQ
Sbjct  257   SAAAEQ  262


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  145   QPPSVS  150


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2232  FPSFSIS  2212
             F SF IS
Sbjct  29    FSSFAIS  35


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = -3

Query  5282  WL----PLL--PKYPHKFH  5244
             WL    P+   P Y +KF+
Sbjct  47    WLGGISPMFGTPNYAQKFQ  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TI G  PED
Sbjct  214   TITGLQPED  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  7282  SGAERKK--SS  7308
             SGAE KK  SS
Sbjct  7     SGAEVKKPGSS  17


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8972  SSMSAV  8955
             SS+SAV
Sbjct  233   SSLSAV  238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  5410  KHPGSQPKTACT  5445
             K PGS  K  CT
Sbjct  12    KKPGSSVKVSCT  23


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  699  TGHSNQV  719
            TG SN V
Sbjct  162  TGNSNNV  168


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8011  ISER  8022
             ISER
Sbjct  198   ISER  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8183  DSNTVGD  8163
             +SN VG+
Sbjct  164   NSNNVGN  170


>pdb|3F8U|A  Chain A, TapasinERP57 HETERODIMER
 pdb|3F8U|C  Chain C, TapasinERP57 HETERODIMER
Length=481


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/13 (53%), Positives = 10/13 (76%), Gaps = 2/13 (15%)
 Frame = +2

Query  2444  SVPL--DEDFRKY  2476
             SVPL  +E+F K+
Sbjct  112   SVPLRTEEEFKKF  124


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  709  AIRSAK  726
            AIR AK
Sbjct  303  AIRTAK  308


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  6020  VVLVNVTENFN  6052
             VV   V ENF+
Sbjct  356   VV---VAENFD  363


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2618  NPDIVI  2635
             +P+IVI
Sbjct  402   DPNIVI  407


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8277  LVELFA  8294
             LVE FA
Sbjct  25    LVEFFA  30


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7514  AVERYLKD  7537
             A ER+L D
Sbjct  324   ALERFLQD  331


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5753  EQKTVA  5770
             E KTVA
Sbjct  192   EDKTVA  197


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1251  LLEFY  1237
             L EFY
Sbjct  374   LIEFY  378


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  405  LALTEFF  385
            L L EFF
Sbjct  23   LMLVEFF  29


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -2

Query  6057  HMLKFSV----TF  6031
             H L F V    TF
Sbjct  271   HKLNFAVASRKTF  283


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  4796  GSAYRRKR  4819
             GS Y R R
Sbjct  251   GSNYWRNR  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7143  VVIATM  7160
             +VIA M
Sbjct  405   IVIAKM  410


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3483  DKKLSP  3500
             +KKL P
Sbjct  435   NKKLNP  440


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1737  ETTTPPQKQE  1766
             E T PP  QE
Sbjct  459   EATNPPVIQE  468


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4485  DQQSSSGKVK  4514
             +Q   SGK+K
Sbjct  200   EQKMTSGKIK  209


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  760  ICPWM  746
            ICP M
Sbjct  219  ICPHM  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5422  FLDA  5411
             FLDA
Sbjct  266   FLDA  269


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 3/5 (60%), Gaps = 0/5 (0%)
 Frame = -1

Query  7033  FYSAW  7019
             FY  W
Sbjct  377   FYAPW  381


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +2

Query  8312  RQG--LERIL  8335
             R G  LER L
Sbjct  320   RDGKALERFL  329


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6872  DPEIV  6886
             DP IV
Sbjct  402   DPNIV  406


>ref|NP_001135995.1|  interleukin-1 receptor-associated kinase 3 isoform b [Homo sapiens]
Length=535

 GENE ID: 11213 IRAK3 | interleukin-1 receptor-associated kinase 3
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +2

Query  8081  LRDLLLIVTRIVELLGRRG  8137
             LRDLL    R  EL+  RG
Sbjct  322   LRDLL----R--ELMEKRG  334


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  6044  FLSHLPILLL  6015
             FLS L +LLL
Sbjct  148   FLSELEVLLL  157


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4957  KAFLIAESE  4931
             K FLI E E
Sbjct  106   KDFLIGEGE  114


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7076  HTLLF  7062
             HTLLF
Sbjct  14    HTLLF  18


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6664  SCTIN  6650
             SCTIN
Sbjct  264   SCTIN  268


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7510  DSCLELLD  7487
             DSCL  LD
Sbjct  336   DSCLSFLD  343


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2126  KLKPGMD  2146
             KL P MD
Sbjct  370   KLRPSMD  376


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6043  FCHIYQY  6023
             FC IY Y
Sbjct  176   FCLIYPY  182


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1944  ELEVL  1958
             ELEVL
Sbjct  151   ELEVL  155


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2555  SIPVE  2541
             SIPVE
Sbjct  415   SIPVE  419


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 3/19 (15%)
 Frame = +2

Query  3851  FNLPPVVAKEIVA---SCD  3898
             F+LPP    E  A   SCD
Sbjct  18    FDLPPALLGELCAVLDSCD  36


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2633  IYQYM  2647
             IY YM
Sbjct  179   IYPYM  183


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  1860  SFSCP-PIF  1837
             SF CP P F
Sbjct  401   SFRCPSPLF  409


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7421  QQNNLL  7438
             Q NNLL
Sbjct  424   QNNNLL  429


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8208  ACSMP  8222
             AC MP
Sbjct  470   ACNMP  474


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7284  TLLFAL  7267
             TLLF L
Sbjct  15    TLLFDL  20


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8668  SLICGS  8685
             S ICGS
Sbjct  227   SVICGS  232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  220  RGALS  234
            RGALS
Sbjct  8    RGALS  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6471  LNVLLL  6454
             L VLLL
Sbjct  152   LEVLLL  157


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1654  EGQIF  1640
             EG+IF
Sbjct  112   EGEIF  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9179  STQGKLY  9159
             STQ  LY
Sbjct  384   STQASLY  390


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  94   STQGKLY  74
            STQ  LY
Sbjct  384  STQASLY  390


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9006  GRRGLG  9023
             G RGLG
Sbjct  40    GWRGLG  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2331  NLIREL  2348
             +L REL
Sbjct  324   DLLREL  329


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2250  GPIFEIF  2230
             G IFE++
Sbjct  113   GEIFEVY  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6622  YGFSIV  6605
             Y F IV
Sbjct  297   YSFGIV  302


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+++D
Sbjct  416   IPVEDD  421


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4502  WKGEGAV  4522
             W G GAV
Sbjct  41    WRGLGAV  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6054  MLKFSVTFTN  6025
             +LK S+ F N
Sbjct  87    LLKSSISFQN  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  1954  TSNSPYHFWF  1925
             TS S  H W+
Sbjct  270   TSSSSKHLWY  279


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  734  RVILAD  717
            RV+L D
Sbjct  311  RVVLDD  316


>ref|NP_009130.2|  interleukin-1 receptor-associated kinase 3 isoform a [Homo sapiens]
Length=596

 GENE ID: 11213 IRAK3 | interleukin-1 receptor-associated kinase 3
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 6/19 (31%)
 Frame = +2

Query  8081  LRDLLLIVTRIVELLGRRG  8137
             LRDLL    R  EL+  RG
Sbjct  383   LRDLL----R--ELMEKRG  395


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  232  RELLW  218
            RELLW
Sbjct  70   RELLW  74


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  6044  FLSHLPILLL  6015
             FLS L +LLL
Sbjct  209   FLSELEVLLL  218


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4957  KAFLIAESE  4931
             K FLI E E
Sbjct  167   KDFLIGEGE  175


 Score = 19.7 bits (39),  Expect(2) =  4167
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6664  SCTIN  6650
             SCTIN
Sbjct  325   SCTIN  329


 Score = 15.9 bits (30),  Expect(2) =  4167
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6622  YGFSIV  6605
             Y F IV
Sbjct  358   YSFGIV  363


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7076  HTLLF  7062
             HTLLF
Sbjct  14    HTLLF  18


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7510  DSCLELLD  7487
             DSCL  LD
Sbjct  397   DSCLSFLD  404


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2126  KLKPGMD  2146
             KL P MD
Sbjct  431   KLRPSMD  437


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6043  FCHIYQY  6023
             FC IY Y
Sbjct  237   FCLIYPY  243


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1944  ELEVL  1958
             ELEVL
Sbjct  212   ELEVL  216


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2555  SIPVE  2541
             SIPVE
Sbjct  476   SIPVE  480


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 3/19 (15%)
 Frame = +2

Query  3851  FNLPPVVAKEIVA---SCD  3898
             F+LPP    E  A   SCD
Sbjct  18    FDLPPALLGELCAVLDSCD  36


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2633  IYQYM  2647
             IY YM
Sbjct  240   IYPYM  244


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  1860  SFSCP-PIF  1837
             SF CP P F
Sbjct  462   SFRCPSPLF  470


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7421  QQNNLL  7438
             Q NNLL
Sbjct  485   QNNNLL  490


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8208  ACSMP  8222
             AC MP
Sbjct  531   ACNMP  535


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7284  TLLFAL  7267
             TLLF L
Sbjct  15    TLLFDL  20


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1892  VLEEM  1906
             VL+EM
Sbjct  89    VLQEM  93


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5815  EMGH  5826
             EMGH
Sbjct  92    EMGH  95


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8668  SLICGS  8685
             S ICGS
Sbjct  288   SVICGS  293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  220  RGALS  234
            RGALS
Sbjct  8    RGALS  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6471  LNVLLL  6454
             L VLLL
Sbjct  213   LEVLLL  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 16/30 (53%)
 Frame = -3

Query  8351  ATHLIA----------KS-----FPSPVLF  8307
             A HLI           KS     FP  +LF
Sbjct  98    AIHLITNYGAVLSPSEKSYQEGGFPN-ILF  126


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1654  EGQIF  1640
             EG+IF
Sbjct  173   EGEIF  177


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9179  STQGKLY  9159
             STQ  LY
Sbjct  445   STQASLY  451


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  94   STQGKLY  74
            STQ  LY
Sbjct  445  STQASLY  451


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2331  NLIREL  2348
             +L REL
Sbjct  385   DLLREL  390


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2182  KNKSI  2196
             KNK I
Sbjct  79    KNKTI  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2250  GPIFEIF  2230
             G IFE++
Sbjct  174   GEIFEVY  180


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+++D
Sbjct  477   IPVEDD  482


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6054  MLKFSVTFTN  6025
             +LK S+ F N
Sbjct  148   LLKSSISFQN  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  1954  TSNSPYHFWF  1925
             TS S  H W+
Sbjct  331   TSSSSKHLWY  340


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  734  RVILAD  717
            RV+L D
Sbjct  372  RVVLDD  377


>emb|CAR63033.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=116


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R SAKN
Sbjct  69    TISRDSAKN  77


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -1

Query  4906  ISWSASSGST  4877
             IS   SSGST
Sbjct  51    IS---SSGST  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  171  ISSSG  185
            ISSSG
Sbjct  51   ISSSG  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7886  NRVRQ  7900
             N VRQ
Sbjct  35    NWVRQ  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


>pdb|3DIF|B  Chain B, Crystal Structure Of Fabox117
 pdb|3DIF|D  Chain D, Crystal Structure Of Fabox117
Length=229


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = -2

Query  4053  VSAG-ITSASIYPLA  4012
             VSA   T  S+YPLA
Sbjct  117   VSAAKTTPPSVYPLA  131


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  8315  QGLERILL*DGW  8350
             QGLE I    GW
Sbjct  43    QGLEWI----GW  50


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/43 (30%), Positives = 14/43 (32%), Gaps = 23/43 (53%)
 Frame = -2

Query  3228  SVVIFCTASVNCFTSLVWAPLILAYFPVFRFLNGS**I*YVHW  3100
             SV I C AS   FTS         Y              Y+HW
Sbjct  17    SVKISCKASGYSFTS---------Y--------------YIHW  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8697  GYFPD  8711
             GYFP+
Sbjct  150   GYFPE  154


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  8256  TLS----VPSAT  8233
             TLS    VPS T
Sbjct  182   TLSSSVTVPSST  193


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  475  LTANRSSS  452
            LTA+ SSS
Sbjct  70   LTADTSSS  77


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = -3

Query  5360  SSNAYSAMSTPNSENG*TAV  5301
             SS AY  +S   SE+   AV
Sbjct  76    SSTAYMQLSSLTSED--SAV  93


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S+YPL
Sbjct  126   SVYPL  130


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7482  QTVSCN  7465
             +TV CN
Sbjct  197   ETVTCN  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6025  YYFLWV  6008
             YY  WV
Sbjct  32    YYIHWV  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3629  QSESELV  3649
             QS  ELV
Sbjct  6     QSGPELV  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2362  FPEVLSS  2342
             FP VL S
Sbjct  172   FPAVLQS  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9055  AYKQL  9069
             AY QL
Sbjct  79    AYMQL  83


>gb|ACA28838.1|  truncated T cell receptor variable alpha 2 chain [Homo sapiens]
Length=144


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/26 (46%), Positives = 13/26 (50%), Gaps = 6/26 (23%)
 Frame = -3

Query  9005  WKVPSGK------SLVASSMSAVLEV  8946
             WKV   K      S VASS  AV E+
Sbjct  20    WKVAESKDQVFQPSTVASSEGAVVEI  45


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7007  TITLPC  7024
             T TLPC
Sbjct  137   TLTLPC  142


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  29  LGALWL  46
           LGA WL
Sbjct  7   LGAVWL  12


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9114  LGALWL  9131
             LGA WL
Sbjct  7     LGAVWL  12


 Score = 17.6 bits (34),  Expect(2) =  9828
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4511  EGAVV  4525
             EGAVV
Sbjct  39    EGAVV  43


 Score = 17.2 bits (33),  Expect(2) =  9828
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4469  NPLWK  4483
             N LWK
Sbjct  17    NSLWK  21


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  3225  VV-IFCTASV  3199
             VV IFC  SV
Sbjct  42    VVEIFCNHSV  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  5295  RILIMASTPAQ  5263
             R L+  S P Q
Sbjct  69    RLLVKGSKPSQ  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8234  VAEGTDRV  8257
             VAE  D V
Sbjct  22    VAESKDQV  29


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  543  SEGMVV  526
            SEG VV
Sbjct  38   SEGAVV  43


>gb|ABR37263.1|  T-cell receptor beta chain [Homo sapiens]
Length=65


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 14/28 (50%)
 Frame = +2

Query  5156  WTLEL----------LEELKNEAVRHFP  5209
             WT EL          LE+LKN  V  FP
Sbjct  32    WTGELFFGEGSRLTVLEDLKN--V--FP  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  105  TLLEALK  85
            T LE LK
Sbjct  45   TVLEDLK  51


>pdb|2D7T|L  Chain L, Crystal Structure Of Human Anti Polyhydroxybutyrate 
Antibody Fv
Length=116


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  1032  GSDIAGTTSTLQ  1067
             G D   T STLQ
Sbjct  68    GTDFTLTISTLQ  79


 Score = 15.1 bits (28),  Expect(2) = 99115
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3542  KLLVTQSSDL  3513
             KLL+   S+L
Sbjct  45    KLLIYAASNL  54


 Score = 15.1 bits (28),  Expect(2) = 99115
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  3415  EGFCSYY  3395
             E F  YY
Sbjct  81    EDFATYY  87


>ref|NP_690880.1|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform b [Homo sapiens]
Length=774

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  543   QTGH-KVLCSIIAGTLHYLYLA  563


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  261   ELLEAPG-DL-ETLPRL---QQ  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  501   CLLLAAL  507


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  420  FSHRS  424


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  365   LAEAPLVLE  373


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  567   WMLLEA  572


 Score = 17.2 bits (33),  Expect(2) = 12386
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  377   QMLL  380


 Score = 15.9 bits (30),  Expect(2) = 12386
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  378   MLLHETHQ---GL  387


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  556   TLHYLYLATLTWMLLEAL  573


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  664   RLSSLNSEVS  673


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  256  LQALDEL  262


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  468   LSSFA  472


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  637   WGFLG  641


 Score = 16.8 bits (32),  Expect(2) = 21291
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  1913  PGRWKP  1930
             PG WKP
Sbjct  193   PG-WKP  197


 Score = 15.1 bits (28),  Expect(2) = 21291
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1781  TVSFN  1795
             TV FN
Sbjct  178   TVCFN  182


 Score = 16.3 bits (31),  Expect(2) = 21294
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  580   RNLTVV  585


 Score = 15.5 bits (29),  Expect(2) = 21294
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  536   LFLVAID  542


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  443   CGHWATTGCS  452


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  573   LYLF  576


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  610   VAISAAS  616


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  713   LFTII-NSL  720


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  732   LSQQVR  737


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  740   YGKWSKG  746


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  747   IRKLKT  752


 Score = 15.9 bits (30),  Expect(2) = 25380
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  467   HLSSFA  472


 Score = 15.5 bits (29),  Expect(2) = 25380
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  454   IGTRDT  459


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2523  DISTMCF  2543
             D ST CF
Sbjct  175   DSSTVCF  181


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  332  QAVMQL  337


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  737   REQYG  741


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  317   EVQKQV  322


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  339   WNQAQK  344


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  471   FAVLM  475


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  654   FLVTLW  659


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  311   GTELSLEV  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  327   TLRQNQA  333


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  425   VIPRQK  430


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  570   LEALYL  575


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  234   DKVQD  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  664   RLSSLNSE  671


>ref|NP_690883.1|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform e [Homo sapiens]
Length=812

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  581   QTGH-KVLCSIIAGTLHYLYLA  601


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  310   ELLEAPG-DL-ETLPRL---QQ  326


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  539   CLLLAAL  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  458  FSHRS  462


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  403   LAEAPLVLE  411


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  605   WMLLEA  610


 Score = 17.2 bits (33),  Expect(2) = 12163
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  415   QMLL  418


 Score = 15.9 bits (30),  Expect(2) = 12163
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  416   MLLHETHQ---GL  425


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  594   TLHYLYLATLTWMLLEAL  611


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  702   RLSSLNSEVS  711


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2034  GPTNTV  2017
             GP NTV
Sbjct  204   GPNNTV  209


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  305  LQALDEL  311


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  506   LSSFA  510


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  675   WGFLG  679


 Score = 16.8 bits (32),  Expect(2) = 20853
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  1913  PGRWKP  1930
             PG WKP
Sbjct  242   PG-WKP  246


 Score = 15.1 bits (28),  Expect(2) = 20853
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1781  TVSFN  1795
             TV FN
Sbjct  227   TVCFN  231


 Score = 16.3 bits (31),  Expect(2) = 20856
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  618   RNLTVV  623


 Score = 15.5 bits (29),  Expect(2) = 20856
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  574   LFLVAID  580


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  55   THCL  66
            THCL
Sbjct  178  THCL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  9140  THCL  9151
             THCL
Sbjct  178   THCL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  481   CGHWATTGCS  490


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  611   LYLF  614


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  648   VAISAAS  654


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  751   LFTII-NSL  758


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  770   LSQQVR  775


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  778   YGKWSKG  784


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  785   IRKLKT  790


 Score = 15.9 bits (30),  Expect(2) = 24917
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  505   HLSSFA  510


 Score = 15.5 bits (29),  Expect(2) = 24917
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  492   IGTRDT  497


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2523  DISTMCF  2543
             D ST CF
Sbjct  224   DSSTVCF  230


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  381  QAVMQL  386


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  775   REQYG  779


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  366   EVQKQV  371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  388   WNQAQK  393


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  509   FAVLM  513


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  692   FLVTLW  697


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  360   GTELSLEV  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  376   TLRQNQA  382


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  463   VIPRQK  468


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  608   LEALYL  613


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  283   DKVQD  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  702   RLSSLNSE  709


>ref|NP_690881.1|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform c [Homo sapiens]
Length=730

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  499   QTGH-KVLCSIIAGTLHYLYLA  519


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  217   ELLEAPG-DL-ETLPRL---QQ  233


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  457   CLLLAAL  463


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  376  FSHRS  380


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  321   LAEAPLVLE  329


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  523   WMLLEA  528


 Score = 17.2 bits (33),  Expect(2) = 12661
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  333   QMLL  336


 Score = 15.9 bits (30),  Expect(2) = 12661
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  334   MLLHETHQ---GL  343


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  512   TLHYLYLATLTWMLLEAL  529


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  620   RLSSLNSEVS  629


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  212  LQALDEL  218


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  424   LSSFA  428


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  593   WGFLG  597


 Score = 16.8 bits (32),  Expect(2) = 21847
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  1913  PGRWKP  1930
             PG WKP
Sbjct  149   PG-WKP  153


 Score = 15.1 bits (28),  Expect(2) = 21847
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1781  TVSFN  1795
             TV FN
Sbjct  134   TVCFN  138


 Score = 16.3 bits (31),  Expect(2) = 21850
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  536   RNLTVV  541


 Score = 15.5 bits (29),  Expect(2) = 21850
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  492   LFLVAID  498


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  399   CGHWATTGCS  408


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  529   LYLF  532


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  566   VAISAAS  572


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  669   LFTII-NSL  676


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  688   LSQQVR  693


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  696   YGKWSKG  702


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  703   IRKLKT  708


 Score = 15.9 bits (30),  Expect(2) = 25977
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  423   HLSSFA  428


 Score = 15.5 bits (29),  Expect(2) = 25977
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  410   IGTRDT  415


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2523  DISTMCF  2543
             D ST CF
Sbjct  131   DSSTVCF  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  288  QAVMQL  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  693   REQYG  697


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  273   EVQKQV  278


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  295   WNQAQK  300


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  427   FAVLM  431


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  610   FLVTLW  615


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  267   GTELSLEV  274


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  283   TLRQNQA  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  381   VIPRQK  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  526   LEALYL  531


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  190   DKVQD  194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  620   RLSSLNSE  627


>ref|NP_690885.1|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform g [Homo sapiens]
Length=719

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  488   QTGH-KVLCSIIAGTLHYLYLA  508


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  217   ELLEAPG-DL-ETLPRL---QQ  233


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  446   CLLLAAL  452


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  365  FSHRS  369


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  310   LAEAPLVLE  318


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  512   WMLLEA  517


 Score = 17.2 bits (33),  Expect(2) = 12733
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  322   QMLL  325


 Score = 15.9 bits (30),  Expect(2) = 12733
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  323   MLLHETHQ---GL  332


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  501   TLHYLYLATLTWMLLEAL  518


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  609   RLSSLNSEVS  618


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  212  LQALDEL  218


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  413   LSSFA  417


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  582   WGFLG  586


 Score = 16.8 bits (32),  Expect(2) = 21995
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  1913  PGRWKP  1930
             PG WKP
Sbjct  149   PG-WKP  153


 Score = 15.1 bits (28),  Expect(2) = 21995
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1781  TVSFN  1795
             TV FN
Sbjct  134   TVCFN  138


 Score = 16.3 bits (31),  Expect(2) = 21998
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  525   RNLTVV  530


 Score = 15.5 bits (29),  Expect(2) = 21998
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  481   LFLVAID  487


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  388   CGHWATTGCS  397


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  518   LYLF  521


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  555   VAISAAS  561


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  658   LFTII-NSL  665


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  677   LSQQVR  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  685   YGKWSKG  691


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  692   IRKLKT  697


 Score = 15.9 bits (30),  Expect(2) = 26138
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  412   HLSSFA  417


 Score = 15.5 bits (29),  Expect(2) = 26138
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  399   IGTRDT  404


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2523  DISTMCF  2543
             D ST CF
Sbjct  131   DSSTVCF  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  288  QAVMQL  293


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  682   REQYG  686


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  273   EVQKQV  278


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  295   WNQAQK  300


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  416   FAVLM  420


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  599   FLVTLW  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  267   GTELSLEV  274


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  283   TLRQNQA  289


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  370   VIPRQK  375


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  515   LEALYL  520


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  190   DKVQD  194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  609   RLSSLNSE  616


>ref|NP_690882.1|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform d [Homo sapiens]
Length=681

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  450   QTGH-KVLCSIIAGTLHYLYLA  470


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  168   ELLEAPG-DL-ETLPRL---QQ  184


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  408   CLLLAAL  414


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  327  FSHRS  331


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  272   LAEAPLVLE  280


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  474   WMLLEA  479


 Score = 17.2 bits (33),  Expect(2) = 12989
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  284   QMLL  287


 Score = 15.9 bits (30),  Expect(2) = 12989
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  285   MLLHETHQ---GL  294


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  463   TLHYLYLATLTWMLLEAL  480


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  571   RLSSLNSEVS  580


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  163  LQALDEL  169


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  375   LSSFA  379


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  544   WGFLG  548


 Score = 16.3 bits (31),  Expect(2) = 22494
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  487   RNLTVV  492


 Score = 15.5 bits (29),  Expect(2) = 22494
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  443   LFLVAID  449


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  350   CGHWATTGCS  359


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  480   LYLF  483


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  517   VAISAAS  523


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  620   LFTII-NSL  627


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  639   LSQQVR  644


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  647   YGKWSKG  653


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  654   IRKLKT  659


 Score = 15.9 bits (30),  Expect(2) = 26729
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  374   HLSSFA  379


 Score = 15.5 bits (29),  Expect(2) = 26729
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  361   IGTRDT  366


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  239  QAVMQL  244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  644   REQYG  648


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  224   EVQKQV  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  246   WNQAQK  251


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  378   FAVLM  382


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  561   FLVTLW  566


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  218   GTELSLEV  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  234   TLRQNQA  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  332   VIPRQK  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  477   LEALYL  482


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  141   DKVQD  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  571   RLSSLNSE  578


>ref|NP_690884.1|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform f [Homo sapiens]
Length=763

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  532   QTGH-KVLCSIIAGTLHYLYLA  552


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  261   ELLEAPG-DL-ETLPRL---QQ  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  490   CLLLAAL  496


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  409  FSHRS  413


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  354   LAEAPLVLE  362


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  556   WMLLEA  561


 Score = 17.2 bits (33),  Expect(2) = 12453
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  366   QMLL  369


 Score = 15.9 bits (30),  Expect(2) = 12453
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  367   MLLHETHQ---GL  376


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  545   TLHYLYLATLTWMLLEAL  562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  653   RLSSLNSEVS  662


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  256  LQALDEL  262


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  457   LSSFA  461


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  626   WGFLG  630


 Score = 16.8 bits (32),  Expect(2) = 21425
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  1913  PGRWKP  1930
             PG WKP
Sbjct  193   PG-WKP  197


 Score = 15.1 bits (28),  Expect(2) = 21425
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1781  TVSFN  1795
             TV FN
Sbjct  178   TVCFN  182


 Score = 16.3 bits (31),  Expect(2) = 21428
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  569   RNLTVV  574


 Score = 15.5 bits (29),  Expect(2) = 21428
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  525   LFLVAID  531


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  432   CGHWATTGCS  441


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  562   LYLF  565


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  599   VAISAAS  605


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  702   LFTII-NSL  709


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  721   LSQQVR  726


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  729   YGKWSKG  735


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  736   IRKLKT  741


 Score = 15.9 bits (30),  Expect(2) = 25523
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  456   HLSSFA  461


 Score = 15.5 bits (29),  Expect(2) = 25523
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  443   IGTRDT  448


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2523  DISTMCF  2543
             D ST CF
Sbjct  175   DSSTVCF  181


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  332  QAVMQL  337


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  726   REQYG  730


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  317   EVQKQV  322


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  339   WNQAQK  344


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  460   FAVLM  464


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  643   FLVTLW  648


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  311   GTELSLEV  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  327   TLRQNQA  333


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  414   VIPRQK  419


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  559   LEALYL  564


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  234   DKVQD  238


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  653   RLSSLNSE  660


>sp|Q86WV1.3|SKAP1_HUMAN  RecName: Full=Src kinase-associated phosphoprotein 1; AltName: 
Full=Src family-associated phosphoprotein 1; AltName: Full=Src 
kinase-associated phosphoprotein of 55 kDa; Short=SKAP-55; 
Short=pp55
Length=359

 GENE ID: 8631 SKAP1 | src kinase associated phosphoprotein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = -2

Query  8673  QGYLV-------FFGSE  8644
             QGYL        FFGSE
Sbjct  111   QGYLEKKSKDHSFFGSE  127


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  518  QYLSTAF  498
            +YL TAF
Sbjct  348  EYLTTAF  354


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1503  QSFFGS  1486
             +SFFGS
Sbjct  121   HSFFGS  126


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = -3

Query  6479  LFH*TSYYYILESQNQP  6429
             LF    YYY  E   QP
Sbjct  139   LF----YYYANEKSKQP  151


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5829  MVPHL  5815
             M PHL
Sbjct  164   MAPHL  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8517  EAQEEEEV  8540
             E  EEE++
Sbjct  263   EEKEEEDI  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3842  PLLSNY  3825
             P LS+Y
Sbjct  85    PFLSDY  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7510  DSCLEL  7493
             +SC EL
Sbjct  175   ESCFEL  180


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2531  YNVLP  2545
             Y VLP
Sbjct  271   YEVLP  275


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7639  ESHDLD  7656
             E HDL+
Sbjct  277   EEHDLE  282


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2711  RQHLLR  2728
             R H LR
Sbjct  38    RDHILR  43


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3016  RDSK  3027
             RDSK
Sbjct  170   RDSK  173


>ref|NP_612154.2|  mucin-4 isoform e [Homo sapiens]
Length=1125

 GENE ID: 4585 MUC4 | mucin 4, cell surface associated [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 9/25 (36%)
 Frame = -2

Query  1302  PTRFLSSNFLPPVKLARL--LEFYR  1234
             P RFL SN         L  L+FYR
Sbjct  244   PDRFLNSN-------SGLQGLQFYR  261


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8248  CPLSYCY  8228
             CP  YCY
Sbjct  835   CPVNYCY  841


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = +2

Query  7544  LLGI--------WGCSG  7570
             LLG+        WGCSG
Sbjct  1095  LLGVGTFVVLRFWGCSG  1111


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2914  PWVNLTC  2894
             PWV L C
Sbjct  10    PWVSLSC  16


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  2520  IPGVSLF  2500
             +PGVSLF
Sbjct  26    VPGVSLF  32


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  7112  NITGLLLTRDGGNSNNESEI  7171
             N TG LL R+G      SE+
Sbjct  500   NATGVLLSRNG------SEV  513


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  4201  GNSKFLLDSR  4172
             GNS FLL  R
Sbjct  427   GNSSFLLQGR  436


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6542  QLLL----NGSLAE  6571
             QLLL    N S+AE
Sbjct  890   QLLLSEEENASMAE  903


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  3711  CAGTHAR*TFSFFIN  3667
             C G  AR  FS+F N
Sbjct  1109  CSG--AR--FSYFLN  1119


 Score = 18.0 bits (35),  Expect(2) =  4158
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6581  VIRSVNFT  6604
             V R V+FT
Sbjct  44    VRRTVDFT  51


 Score = 17.2 bits (33),  Expect(2) =  4158
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6599  FTDNAKTI  6622
             FTDN   I
Sbjct  73    FTDNGQII  80


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8902  LSN-LHSNTSL  8873
             LSN LH   SL
Sbjct  528   LSNILHASASL  538


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  7099  NLSTDGRGIHC  7067
             NL  DGR  HC
Sbjct  813   NLTGDGR--HC  821


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  254  QQAES  240
            QQAES
Sbjct  141  QQAES  145


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  7399  LSGLYRQR--H*GCA  7361
             L  LY QR  H GCA
Sbjct  373   LCALYQQRRPHVGCA  387


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +3

Query  1710  PEESFR--SGVETTTPP  1754
             PE+ FR   G   T PP
Sbjct  557   PEDDFRMPNG--STIPP  571


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +3

Query  6978  KGQITLKEVTQSPSHAE  7028
             KGQ TL    Q  S AE
Sbjct  679   KGQTTL---IQYTSNAE  692


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 21/39 (53%)
 Frame = -3

Query  5159  SIHCV--------APS--------VALGLLGLVPSILCQ  5091
             S+HCV         P          ALG      S LCQ
Sbjct  798   SVHCVPGKGCEACPPNLTGDGRHCAALG-----SSFLCQ  831


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1562  PRGPAI  1545
             PRGP I
Sbjct  953   PRGPVI  958


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  2411  VTVLDVG--DAYF  2443
             VT L+V    AYF
Sbjct  1001  VTALNVSTLKAYF  1013


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6413  WELAQR  6396
             W+ AQR
Sbjct  207   WDVAQR  212


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8610  FLKEKGGLEGL  8642
             FL    GL+GL
Sbjct  247   FLNSNSGLQGL  257


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +2

Query  6869  GDPEI-----VTHSFNCG-GEF  6916
             GDP I     V   FN G G+F
Sbjct  399   GDPHITTLDGVSYTFN-GLGDF  419


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2650  IHVLIDN  2630
             I VL DN
Sbjct  475   IRVLLDN  481


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6464  TFNGTG  6481
             TFN TG
Sbjct  498   TFNATG  503


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7386  TVSVI  7372
             TVSVI
Sbjct  522   TVSVI  526


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7544  LLGIW  7558
             LLG+W
Sbjct  549   LLGVW  553


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6752  QAHCNIS  6772
             Q HC IS
Sbjct  843   QGHCYIS  849


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  230  RAPLVSLS  207
            R P VSLS
Sbjct  8    RVPWVSLS  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  2356  LGSSIRN  2376
             LGSS R+
Sbjct  63    LGSSLRD  69


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7317  ELCSLGSW  7340
             +LCS  SW
Sbjct  321   QLCSFTSW  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6789  LFHF  6778
             LFHF
Sbjct  578   LFHF  581


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1267  CEAC  1256
             CEAC
Sbjct  807   CEAC  810


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3342  NSHSGIQ  3322
             NS SG Q
Sbjct  249   NSNSGLQ  255


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5371  QEMEP  5385
             QE+EP
Sbjct  356   QELEP  360


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4098  HLPANF  4081
             +LP NF
Sbjct  599   QLPSNF  604


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1138  RIIHLL  1121
             R+I+LL
Sbjct  887   RVIQLL  892


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +2

Query  7082  PISGQ-IRCSSNITGL  7126
             PISG+ +R   ++T L
Sbjct  992   PISGEDVR---DVTAL  1004


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1054  VVPAMSL  1034
             VVP  SL
Sbjct  25    VVPGVSL  31


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1296  LLVQNA  1313
             LLVQ A
Sbjct  138   LLVQQA  143


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7107  EHLI  7096
             EHLI
Sbjct  620   EHLI  623


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  705  HSNQVSQNY  731
            H  +VS NY
Sbjct  647  HTREVSKNY  655


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -2

Query  6519  PC---VHC  6505
             PC   VHC
Sbjct  794   PCFPSVHC  801


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3157  CKNEGCP  3177
             C N+ CP
Sbjct  830   CQNQSCP  836


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  1851  CPPIFIVTRGRC  1816
             CPP F  T  RC
Sbjct  860   CPPAF--TDSRC  869


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5306  AVVAEFL  5286
             AVV  FL
Sbjct  968   AVVEAFL  974


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3865  RWQVKIT  3845
             RW  K+T
Sbjct  159   RWALKVT  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5579  LYQS  5590
             LYQS
Sbjct  199   LYQS  202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2429  GDAYF  2443
             GD YF
Sbjct  224   GDGYF  228


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9006  GRRGLG  9023
             GR GLG
Sbjct  313   GRWGLG  318


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5858  HYRSS  5844
             +YRSS
Sbjct  454   QYRSS  458


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8376  GWPTV  8390
             GW TV
Sbjct  519   GWATV  523


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8720  LHTR  8731
             LHTR
Sbjct  646   LHTR  649


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1181  NAGRAIHSY  1155
             N GR I  Y
Sbjct  670   NGGRVIEAY  678


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8252  RVIE  8263
             RVIE
Sbjct  673   RVIE  676


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  5946  LASDAQNRVVV  5914
             LAS  Q R VV
Sbjct  736   LASALQPRTVV  746


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4428  VICFCN  4411
             V+C CN
Sbjct  745   VVCHCN  750


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8873  LRVIH  8859
             LRVI+
Sbjct  886   LRVIQ  890


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3834  EQWLVI  3851
             ++W+VI
Sbjct  941   QHWMVI  946


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7068  QCMPLPS  7088
             QC  LPS
Sbjct  1047  QCQHLPS  1053


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2475  YFLKS  2461
             YFL S
Sbjct  1116  YFLNS  1120


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8986  FPLG  8997
             FPLG
Sbjct  61    FPLG  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1653  KARSSLK  1633
             KAR  LK
Sbjct  157   KARWALK  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6556  WQSSRR  6573
             WQ  RR
Sbjct  298   WQQGRR  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3777  NSTFL  3763
             NS FL
Sbjct  428   NSSFL  432


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7032  FILHGR  7015
             F L+GR
Sbjct  431   FLLQGR  436


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 10/24 (41%)
 Frame = +1

Query  8932  SCI------RSTSRTADIELATRD  8985
             SCI      R  S    I L TR+
Sbjct  631   SCIYDTLALRNAS----IGLHTRE  650


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7712  LQLRSVLSLCN  7680
             LQ R V   CN
Sbjct  740   LQPRTVVCHCN  750


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3081  YRSRG  3095
             YR RG
Sbjct  951   YRPRG  955


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7260  HPPRQREE  7283
             H PR  EE
Sbjct  976   HVPRRSEE  983


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7330  WVLGS  7344
             W LGS
Sbjct  176   WTLGS  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2456  DEDFR  2470
             ++DFR
Sbjct  558   EDDFR  562


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3576  FTSNPE  3559
             +TSN E
Sbjct  687   YTSNAE  692


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5485  CFITKALG  5508
             C+I   LG
Sbjct  846   CYISQTLG  853


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9062  SSCFL  9076
             S CFL
Sbjct  867   SRCFL  871


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  1973  TVLL**NLQFPL  1938
             TV    NL+ PL
Sbjct  879   TV----NLELPL  886


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7464  RCCCAS  7447
             RC C S
Sbjct  1056  RCSCVS  1061


>ref|NP_004523.3|  mucin-4 isoform d [Homo sapiens]
Length=1176

 GENE ID: 4585 MUC4 | mucin 4, cell surface associated [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 9/25 (36%)
 Frame = -2

Query  1302  PTRFLSSNFLPPVKLARL--LEFYR  1234
             P RFL SN         L  L+FYR
Sbjct  295   PDRFLNSN-------SGLQGLQFYR  312


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8248  CPLSYCY  8228
             CP  YCY
Sbjct  886   CPVNYCY  892


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 8/17 (47%)
 Frame = +2

Query  7544  LLGI--------WGCSG  7570
             LLG+        WGCSG
Sbjct  1146  LLGVGTFVVLRFWGCSG  1162


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2914  PWVNLTC  2894
             PWV L C
Sbjct  10    PWVSLSC  16


 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
 Frame = +2

Query  7112  NITGLLLTRDGGNSNNESEI  7171
             N TG LL R+G      SE+
Sbjct  551   NATGVLLSRNG------SEV  564


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  4201  GNSKFLLDSR  4172
             GNS FLL  R
Sbjct  478   GNSSFLLQGR  487


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6542  QLLL----NGSLAE  6571
             QLLL    N S+AE
Sbjct  941   QLLLSEEENASMAE  954


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  3711  CAGTHAR*TFSFFIN  3667
             C G  AR  FS+F N
Sbjct  1160  CSG--AR--FSYFLN  1170


 Score = 18.0 bits (35),  Expect(2) =  4101
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6581  VIRSVNFT  6604
             V R V+FT
Sbjct  95    VRRTVDFT  102


 Score = 17.2 bits (33),  Expect(2) =  4101
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6599  FTDNAKTI  6622
             FTDN   I
Sbjct  124   FTDNGQII  131


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8902  LSN-LHSNTSL  8873
             LSN LH   SL
Sbjct  579   LSNILHASASL  589


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  7099  NLSTDGRGIHC  7067
             NL  DGR  HC
Sbjct  864   NLTGDGR--HC  872


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7387  TGQTII  7404
             T QTII
Sbjct  50    TSQTII  55


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  254  QQAES  240
            QQAES
Sbjct  192  QQAES  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -1

Query  7399  LSGLYRQR--H*GCA  7361
             L  LY QR  H GCA
Sbjct  424   LCALYQQRRPHVGCA  438


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +3

Query  1710  PEESFR--SGVETTTPP  1754
             PE+ FR   G   T PP
Sbjct  608   PEDDFRMPNG--STIPP  622


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +3

Query  6978  KGQITLKEVTQSPSHAE  7028
             KGQ TL    Q  S AE
Sbjct  730   KGQTTL---IQYTSNAE  743


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/39 (30%), Positives = 13/39 (33%), Gaps = 21/39 (53%)
 Frame = -3

Query  5159  SIHCV--------APS--------VALGLLGLVPSILCQ  5091
             S+HCV         P          ALG      S LCQ
Sbjct  849   SVHCVPGKGCEACPPNLTGDGRHCAALG-----SSFLCQ  882


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1562  PRGPAI  1545
             PRGP I
Sbjct  1004  PRGPVI  1009


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  2411  VTVLDVG--DAYF  2443
             VT L+V    AYF
Sbjct  1052  VTALNVSTLKAYF  1064


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6413  WELAQR  6396
             W+ AQR
Sbjct  258   WDVAQR  263


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  8610  FLKEKGGLEGL  8642
             FL    GL+GL
Sbjct  298   FLNSNSGLQGL  308


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = +2

Query  6869  GDPEI-----VTHSFNCG-GEF  6916
             GDP I     V   FN G G+F
Sbjct  450   GDPHITTLDGVSYTFN-GLGDF  470


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2650  IHVLIDN  2630
             I VL DN
Sbjct  526   IRVLLDN  532


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6464  TFNGTG  6481
             TFN TG
Sbjct  549   TFNATG  554


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7386  TVSVI  7372
             TVSVI
Sbjct  573   TVSVI  577


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7544  LLGIW  7558
             LLG+W
Sbjct  600   LLGVW  604


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6752  QAHCNIS  6772
             Q HC IS
Sbjct  894   QGHCYIS  900


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  230  RAPLVSLS  207
            R P VSLS
Sbjct  8    RVPWVSLS  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  2356  LGSSIRN  2376
             LGSS R+
Sbjct  114   LGSSLRD  120


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7317  ELCSLGSW  7340
             +LCS  SW
Sbjct  372   QLCSFTSW  379


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6789  LFHF  6778
             LFHF
Sbjct  629   LFHF  632


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1267  CEAC  1256
             CEAC
Sbjct  858   CEAC  861


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3342  NSHSGIQ  3322
             NS SG Q
Sbjct  300   NSNSGLQ  306


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5371  QEMEP  5385
             QE+EP
Sbjct  407   QELEP  411


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4098  HLPANF  4081
             +LP NF
Sbjct  650   QLPSNF  655


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1138  RIIHLL  1121
             R+I+LL
Sbjct  938   RVIQLL  943


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +2

Query  7082  PISGQ-IRCSSNITGL  7126
             PISG+ +R   ++T L
Sbjct  1043  PISGEDVR---DVTAL  1055


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1296  LLVQNA  1313
             LLVQ A
Sbjct  189   LLVQQA  194


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7107  EHLI  7096
             EHLI
Sbjct  671   EHLI  674


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  705  HSNQVSQNY  731
            H  +VS NY
Sbjct  698  HTREVSKNY  706


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -2

Query  6519  PC---VHC  6505
             PC   VHC
Sbjct  845   PCFPSVHC  852


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3157  CKNEGCP  3177
             C N+ CP
Sbjct  881   CQNQSCP  887


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  1851  CPPIFIVTRGRC  1816
             CPP F  T  RC
Sbjct  911   CPPAF--TDSRC  920


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5306  AVVAEFL  5286
             AVV  FL
Sbjct  1019  AVVEAFL  1025


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3865  RWQVKIT  3845
             RW  K+T
Sbjct  210   RWALKVT  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5579  LYQS  5590
             LYQS
Sbjct  250   LYQS  253


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2429  GDAYF  2443
             GD YF
Sbjct  275   GDGYF  279


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9006  GRRGLG  9023
             GR GLG
Sbjct  364   GRWGLG  369


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5858  HYRSS  5844
             +YRSS
Sbjct  505   QYRSS  509


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8376  GWPTV  8390
             GW TV
Sbjct  570   GWATV  574


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8720  LHTR  8731
             LHTR
Sbjct  697   LHTR  700


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1181  NAGRAIHSY  1155
             N GR I  Y
Sbjct  721   NGGRVIEAY  729


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8252  RVIE  8263
             RVIE
Sbjct  724   RVIE  727


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  5946  LASDAQNRVVV  5914
             LAS  Q R VV
Sbjct  787   LASALQPRTVV  797


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4428  VICFCN  4411
             V+C CN
Sbjct  796   VVCHCN  801


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8873  LRVIH  8859
             LRVI+
Sbjct  937   LRVIQ  941


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3834  EQWLVI  3851
             ++W+VI
Sbjct  992   QHWMVI  997


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7068  QCMPLPS  7088
             QC  LPS
Sbjct  1098  QCQHLPS  1104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2475  YFLKS  2461
             YFL S
Sbjct  1167  YFLNS  1171


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7851  PTKPPTII  7828
             PT   TII
Sbjct  48    PTTSQTII  55


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4839  LPDPNASLF  4813
             LP+   SLF
Sbjct  75    LPERGVSLF  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8986  FPLG  8997
             FPLG
Sbjct  112   FPLG  115


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1653  KARSSLK  1633
             KAR  LK
Sbjct  208   KARWALK  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6556  WQSSRR  6573
             WQ  RR
Sbjct  349   WQQGRR  354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3777  NSTFL  3763
             NS FL
Sbjct  479   NSSFL  483


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7032  FILHGR  7015
             F L+GR
Sbjct  482   FLLQGR  487


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 10/24 (41%)
 Frame = +1

Query  8932  SCI------RSTSRTADIELATRD  8985
             SCI      R  S    I L TR+
Sbjct  682   SCIYDTLALRNAS----IGLHTRE  701


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7712  LQLRSVLSLCN  7680
             LQ R V   CN
Sbjct  791   LQPRTVVCHCN  801


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3081  YRSRG  3095
             YR RG
Sbjct  1002  YRPRG  1006


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7260  HPPRQREE  7283
             H PR  EE
Sbjct  1027  HVPRRSEE  1034


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  7925  SETIMVNIP  7899
             S+TI   IP
Sbjct  51    SQTIISTIP  59


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4152  TVAPVKLLP  4126
             T AP+  LP
Sbjct  68    TAAPIPILP  76


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7330  WVLGS  7344
             W LGS
Sbjct  227   WTLGS  231


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2456  DEDFR  2470
             ++DFR
Sbjct  609   EDDFR  613


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3576  FTSNPE  3559
             +TSN E
Sbjct  738   YTSNAE  743


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5485  CFITKALG  5508
             C+I   LG
Sbjct  897   CYISQTLG  904


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9062  SSCFL  9076
             S CFL
Sbjct  918   SRCFL  922


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  1973  TVLL**NLQFPL  1938
             TV    NL+ PL
Sbjct  930   TV----NLELPL  937


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7464  RCCCAS  7447
             RC C S
Sbjct  1107  RCSCVS  1112


>ref|NP_038475.2|  EGF-like module-containing mucin-like hormone receptor-like 2 
isoform a [Homo sapiens]
Length=823

 GENE ID: 30817 EMR2 | egf-like module containing, mucin-like, hormone
receptor-like 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = +3

Query  4992  QAGHNKV------GSLQYLALA  5039
             Q GH KV      G L+YL LA
Sbjct  592   QTGH-KVLCSIIAGTLHYLYLA  612


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6968  WSTEGS  6985
             W TEGS
Sbjct  86    WNTEGS  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 5/22 (22%)
 Frame = -1

Query  7498  ELLDAPDCELQQMLLRLNSPQQ  7433
             ELL+AP  +L + L RL   QQ
Sbjct  310   ELLEAPG-DL-ETLPRL---QQ  326


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2846  CLFLAAL  2826
             CL LAAL
Sbjct  550   CLLLAAL  556


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3748  SQCWNQE  3768
             S CWN E
Sbjct  83    SDCWNTE  89


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  388  FSHRS  374
            FSHRS
Sbjct  469  FSHRS  473


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3389  EPIVGAETF  3415
             EP+ GA TF
Sbjct  101   EPVSGAKTF  109


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8155  LVESPTVLE  8181
             L E P VLE
Sbjct  414   LAEAPLVLE  422


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8759  WMVLQA  8776
             WM L+A
Sbjct  616   WMLLEA  621


 Score = 17.2 bits (33),  Expect(2) = 12101
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7465  QMLL  7454
             QMLL
Sbjct  426   QMLL  429


 Score = 15.9 bits (30),  Expect(2) = 12101
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  7426  LLLHYTRQ*LSGL  7388
             +LLH T Q   GL
Sbjct  427   MLLHETHQ---GL  436


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -3

Query  3047  TLHVL-------VLLESL  3015
             TLH L        LLE L
Sbjct  605   TLHYLYLATLTWMLLEAL  622


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8905  RLSNLHSNTS  8876
             RLS L S  S
Sbjct  713   RLSSLNSEVS  722


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2034  GPTNTV  2017
             GP NTV
Sbjct  204   GPNNTV  209


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  996  LHALDAL  976
            L+ALD L
Sbjct  305  LQALDEL  311


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3541  LSSFA  3555
             LSSFA
Sbjct  517   LSSFA  521


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5254  WGYLG  5268
             WG+LG
Sbjct  686   WGFLG  690


 Score = 16.8 bits (32),  Expect(2) = 20733
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +2

Query  1913  PGRWKP  1930
             PG WKP
Sbjct  242   PG-WKP  246


 Score = 15.1 bits (28),  Expect(2) = 20733
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1781  TVSFN  1795
             TV FN
Sbjct  227   TVCFN  231


 Score = 16.3 bits (31),  Expect(2) = 20736
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3813  RNITVI  3830
             RN TV+
Sbjct  629   RNLTVV  634


 Score = 15.5 bits (29),  Expect(2) = 20736
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3773  LFLDGID  3793
             LFL  ID
Sbjct  585   LFLVAID  591


 Score = 15.9 bits (30),  Expect(2) = 24792
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6277  HLTSYA  6260
             HL S+A
Sbjct  516   HLSSFA  521


 Score = 15.5 bits (29),  Expect(2) = 24792
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6408  IGSKDT  6391
             IG  DT
Sbjct  503   IGTRDT  508


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  55   THCL  66
            THCL
Sbjct  178  THCL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  9140  THCL  9151
             THCL
Sbjct  178   THCL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  5136  CGPWSSGACS  5107
             CG W    CS
Sbjct  492   CGHWATTGCS  501


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4870  LYLF  4859
             LYLF
Sbjct  622   LYLF  625


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5542  VAVSASS  5522
             VA+SA S
Sbjct  659   VAISAAS  665


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4597  LFSIIPNDL  4571
             LF II N L
Sbjct  762   LFTII-NSL  769


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3504  LTQQIR  3521
             L QQ+R
Sbjct  781   LSQQVR  786


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  789   YGKWSKG  795


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2337  IRELKT  2354
             IR LKT
Sbjct  796   IRKLKT  801


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  238  QDSAC  252
            QDS C
Sbjct  35   QDSSC  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2523  DISTMCF  2543
             D ST CF
Sbjct  224   DSSTVCF  230


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  918  QAAMQM  935
            QA MQ+
Sbjct  381  QAVMQL  386


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6818  REQFG  6832
             REQ+G
Sbjct  786   REQYG  790


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             E QKQ+
Sbjct  366   EVQKQV  371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5106  WNKPQK  5123
             WN  QK
Sbjct  388   WNQAQK  393


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6780  FALLM  6766
             FA LM
Sbjct  520   FAVLM  524


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4338  FLLKLW  4321
             FL  LW
Sbjct  703   FLVTLW  708


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2081  NQSEST  2064
             N+SE T
Sbjct  111   NESENT  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8652  GSELALPV  8629
             G EL L V
Sbjct  360   GTELSLEV  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1242  TLRAEQA  1262
             TLR  QA
Sbjct  376   TLRQNQA  382


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4550  VVPRRK  4567
             V+PR K
Sbjct  474   VIPRQK  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3530  LQAIYL  3547
             L+A YL
Sbjct  619   LEALYL  624


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3791  DKAQD  3805
             DK QD
Sbjct  283   DKVQD  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3064  RLNSRNTE  3087
             RL S N E
Sbjct  713   RLSSLNSE  720


>sp|P19801.4|ABP1_HUMAN  RecName: Full=Amiloride-sensitive amine oxidase [copper-containing]; 
Short=Diamine oxidase; Short=DAO; AltName: Full=Amiloride-binding 
protein; Short=ABP; AltName: Full=Histaminase; 
AltName: Full=Kidney amine oxidase; Short=KAO; Flags: Precursor
Length=751

 GENE ID: 26 ABP1 | amiloride binding protein 1 (amine oxidase
(copper-containing)) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 27/48 (56%)
 Frame = -3

Query  2450  ELKNMHHPHPVLLLIFSFL----TLR-----------DVVFLIE--LP  2358
             ELK  H          SFL     LR           + VFLIE  LP
Sbjct  40    ELKAVH----------SFLWSKKELRLQPSSTTTMAKNTVFLIEMLLP  77


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7406  TIIVWP  7389
             T+IVWP
Sbjct  713   TVIVWP  718


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8051  RSLCLF  8068
             R LCLF
Sbjct  414   RALCLF  419


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8211  CSMPQP  8228
             CSMP P
Sbjct  736   CSMPPP  741


 Score = 18.5 bits (36),  Expect(2) =  3864
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5955  IQRYI  5969
             IQRY+
Sbjct  203   IQRYV  207


 Score = 17.2 bits (33),  Expect(2) =  3864
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6067  HGRTDA  6084
             HG TDA
Sbjct  223   HGSTDA  228


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6777  ALLMLQ  6760
             A LMLQ
Sbjct  10    AILMLQ  15


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2537  VLPQGW  2554
             VLP GW
Sbjct  604   VLPPGW  609


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1727  VWGRDN  1744
             VW RDN
Sbjct  716   VWPRDN  721


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2205  FVQRW  2219
             +VQRW
Sbjct  725   YVQRW  729


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2527  ISNPW  2513
             I NPW
Sbjct  539   ITNPW  543


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7335  SWEQQEA  7355
             SWE Q A
Sbjct  560   SWERQAA  566


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3780  KNSTFLI  3760
             KN  FLI
Sbjct  66    KNTVFLI  72


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1615  VQSFIW  1598
             V+SF W
Sbjct  44    VHSFLW  49


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  776  YGLMYH  759
            Y L+YH
Sbjct  148  YALLYH  153


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3629  DLVVLE  3612
             D VVLE
Sbjct  259   DVVVLE  264


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5074  KGGFIFF  5054
             KGGF F+
Sbjct  436   KGGFNFY  442


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  4972  TMCPNKAFLI  4943
             TM  N  FLI
Sbjct  63    TMAKNTVFLI  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8347  VASGQ  8361
             VASGQ
Sbjct  192   VASGQ  196


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  212  GKPEEL  229
            G PEEL
Sbjct  244  GSPEEL  249


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8327  FPSPV  8313
             FPSP+
Sbjct  291   FPSPI  295


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6390  RYPL  6401
             RYPL
Sbjct  619   RYPL  622


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8742  RYPL  8753
             RYPL
Sbjct  619   RYPL  622


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8358  SKSSVIGWP  8384
             S   VI WP
Sbjct  710   SRDTVIVWP  718


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5878  HSLLW  5892
             HS LW
Sbjct  45    HSFLW  49


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5103  YPLSV  5089
             YPL V
Sbjct  620   YPLAV  624


 Score = 15.1 bits (28),  Expect(2) = 42518
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7324  VPWVLGS  7344
             V W LGS
Sbjct  374   VGWGLGS  380


 Score = 15.1 bits (28),  Expect(2) = 42518
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7354  HYGRSL  7371
             HY R L
Sbjct  411   HYPRAL  416


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  380  MGKNSV  397
            M KN V
Sbjct  64   MAKNTV  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2600  LRFL  2589
             LRFL
Sbjct  83    LRFL  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2053  NYVDR  2039
             NYV R
Sbjct  724   NYVQR  728


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3147  VFRFLN  3130
             V RFL+
Sbjct  82    VLRFLD  87


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6619  HNSTAE  6636
             H+ST E
Sbjct  273   HDSTEE  278


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4364  GERI  4375
             GERI
Sbjct  343   GERI  346


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4035  SASIY  4021
             S SIY
Sbjct  634   SSSIY  638


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  1498  FLW  1490
             FLW
Sbjct  47    FLW  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5356  LDRGE  5370
             LD GE
Sbjct  86    LDKGE  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1192  DKDQRNP  1212
             DK +R P
Sbjct  87    DKGERHP  93


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6211  DNGER  6225
             D GER
Sbjct  87    DKGER  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +1

Query  1654  PTREGQGIFFRADQ  1695
             P RE   + F  DQ
Sbjct  93    PVREARAVIFFGDQ  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  118   PLPGP  122


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6421  IMYGNW  6404
             ++YG W
Sbjct  317   VLYGGW  322


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6499  HSTMYT  6516
             H T YT
Sbjct  486   HATFYT  491


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  744  NIQGQMVH  767
            NI+ ++VH
Sbjct  508  NIHTHLVH  515


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8332  NPFQAL  8315
             N FQ L
Sbjct  527   NSFQTL  532


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3295  MVDRVL  3312
             M D VL
Sbjct  600   MADQVL  605


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2562  DPFHP  2548
             DP HP
Sbjct  642   DPWHP  646


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  913  PPTVF  899
            PP VF
Sbjct  646  PPVVF  650


>ref|NP_001129316.1|  signal-regulatory protein beta-1 isoform 3 precursor [Homo sapiens]
Length=398

 GENE ID: 10326 SIRPB1 | signal-regulatory protein beta 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -1

Query  5842  HPKEHG---APSP  5813
             HPKE+G   AP P
Sbjct  351   HPKEQGSNTAPGP  363


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3080  FLLLSLLMG  3054
             FLL+ LL+G
Sbjct  14    FLLMTLLLG  22


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +3

Query  6990  TLKEVTQSPSHAE  7028
             TL EVTQ P  AE
Sbjct  254   TL-EVTQQPVRAE  265


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4742  TYSWM  4728
             TY WM
Sbjct  308   TYNWM  312


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -2

Query  4581  LMIFAFLLG  4555
             L+I AFLLG
Sbjct  371   LLI-AFLLG  378


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 8/16 (50%)
 Frame = -2

Query  8637  LPVP--------PFLL  8614
             +PVP        PFLL
Sbjct  1     MPVPASWPHLPSPFLL  16


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  2942  LRGTKALTEVI  2974
             LRGT  L E I
Sbjct  239   LRGTANLSETI  249


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  3173  AHTNDVKQLT  3202
             AH +DVK LT
Sbjct  321   AHRDDVK-LT  329


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  4365  PALYPPIP-PFLL  4330
             PA  P  P PFLL
Sbjct  4     PASWPHLPSPFLL  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6279  RKNMHFFI  6302
             R NM F I
Sbjct  98    RNNMDFSI  105


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8329  DFAIR  8343
             DF IR
Sbjct  102   DFSIR  106


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2606  FRKQNPD  2626
             FRK  PD
Sbjct  123   FRKGSPD  129


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6532  SINSTA  6549
             SI STA
Sbjct  207   SIHSTA  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2144  PFLALILL  2121
             PFL + LL
Sbjct  13    PFLLMTLL  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1021  ENQGEVT  1041
             ENQ  VT
Sbjct  265   ENQVNVT  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3824  CDISHV  3807
             C++ HV
Sbjct  227   CEVAHV  232


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             VN TC
Sbjct  268   VNVTC  272


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2017  TYSFMS  2000
             TY  MS
Sbjct  308   TYNWMS  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1189  MSRMLV  1172
             MS +LV
Sbjct  312   MSWLLV  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             V LTC
Sbjct  326   VKLTC  330


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  1591  SFPHFQQPFFL  1559
             S PH   PF L
Sbjct  6     SWPHLPSPFLL  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2771  PFLWM  2785
             PFL M
Sbjct  13    PFLLM  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8873  LRVIHP  8856
             L VI+P
Sbjct  33    LQVIQP  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1796  FPQVT  1810
             FP VT
Sbjct  86    FPRVT  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7567  RATP  7556
             RATP
Sbjct  158   RATP  161


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6026  LVNV  6037
             LVNV
Sbjct  316   LVNV  319


>ref|NP_996554.1|  osteoclast-associated immunoglobulin-like receptor isoform 1 
[Homo sapiens]
Length=286

 GENE ID: 126014 OSCAR | osteoclast associated, immunoglobulin-like receptor
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 36/61 (59%)
 Frame = -3

Query  1775  VYRLLLLRGSCCLYPRPEALFWWGCW---LWS------------ALKKIPWPSLVGRPDL  1641
             +YR       CC Y RP+       W    WS             L   P PSLV    L
Sbjct  101   IYR-------CC-YRRPD-------WGPGVWSQPSDVLELLVTEEL---PRPSLVA---L  139

Query  1640  P  1638
             P
Sbjct  140   P  140


 Score = 21.8 bits (44),  Expect =   981
 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 20/48 (41%)
 Frame = -2

Query  4395  SVAIMSTILSPALYPPIPPFLLKLWMNT--AICTAV-------LRCSA  4279
             SVAI   I  PA Y P P      W+    A  T V       LRC A
Sbjct  23    SVAI---IVPPASYHPKP------WLGAQPA--TVVTPGVNVTLRCRA  59


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5824  APSPPPS  5804
             AP PPPS
Sbjct  239   APGPPPS  245


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             P PPPS
Sbjct  277   PAPPPS  282


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  6264  M-LVLIL  6247
             M LVLIL
Sbjct  1     MALVLIL  7


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1548  CRAP  1559
             CRAP
Sbjct  57    CRAP  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = -2

Query  3483  LPLLVTYPAF-----PNLVSL  3436
             L LLVT         P LV L
Sbjct  123   LELLVT----EELPRPSLVAL  139


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  365  GRIRSM  382
            GR R M
Sbjct  156  GRLRNM  161


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2345  TQDFWE  2362
             TQD W+
Sbjct  271   TQDSWD  276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2417  LLLIFSFLTL  2388
             L LI   LTL
Sbjct  3     LVLILQLLTL  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7010  ITLPCR  7027
             +TL CR
Sbjct  53    VTLRCR  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8717  LLIREV  8700
             LL R+V
Sbjct  77    LLFRDV  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4502  WKGEG  4516
             W GEG
Sbjct  221   WEGEG  225


>ref|NP_789790.2|  NACHT, LRR and PYD domains-containing protein 9 [Homo sapiens]
Length=991

 GENE ID: 338321 NLRP9 | NLR family, pyrin domain containing 9 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  7483  PDCELQQML  7457
             PDC L QML
Sbjct  940   PDCAL-QML  947


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -1

Query  3736  LFI-SSNSFVCW  3704
             LFI   N F CW
Sbjct  330   LFILCHNPFTCW  341


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  3711  TKELEEM-NK  3737
             TK  EEM NK
Sbjct  86    TKAQEEMRNK  95


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 13/30 (43%)
 Frame = -2

Query  8382  AIQSHYF-LTTCHPSYSKILSKPCLI-LLG  8299
             A Q HYF L   HP   K      LI LLG
Sbjct  279   AMQKHYFMLR--HP---K------LIKLLG  297


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 3/14 (21%)
 Frame = -1

Query  1633  KLACLSVQSFIWCP  1592
             KL CL  Q    CP
Sbjct  886   KLECLGLQT---CP  896


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1685  LKKIPWPSL  1659
             LK IPW  L
Sbjct  39    LKPIPWAEL  47


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4746  LNLFL  4732
             LNLFL
Sbjct  73    LNLFL  77


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4306  LYCCL  4292
             +YCCL
Sbjct  779   MYCCL  783


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2063  LLTQIG  2080
             LLTQ+G
Sbjct  487   LLTQVG  492


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1495  LWFLK  1481
             LW+LK
Sbjct  12    LWYLK  16


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7805  LWYIK  7819
             LWY K
Sbjct  12    LWYLK  16


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5567  LIKLL  5581
             LIKLL
Sbjct  292   LIKLL  296


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = -1

Query  5191  FILKLL*KL*C--PFIVWL  5141
             FIL       C  PF  WL
Sbjct  331   FIL-------CHNPFTCWL  342


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  3858  RLKSL-AIA  3835
             RLKSL A A
Sbjct  391   RLKSLCALA  399


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6124  MCKI  6135
             MCKI
Sbjct  713   MCKI  716


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3687  TFSFFIN  3667
             TF FF N
Sbjct  180   TFVFFLN  186


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  5740  RLIERAED  5763
             RL ER ED
Sbjct  350   RL-ERGED  356


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3218  ITTESIV  3238
             I TE IV
Sbjct  498   ISTEEIV  504


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3059  SKDLIAEI  3082
             SKDL  EI
Sbjct  516   SKDLKQEI  523


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6083  ASVLPC  6066
             ASVL C
Sbjct  735   ASVLAC  740


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = +2

Query  5756  QKTVAMRVKEKYQHL  5800
             QK   M V EK  HL
Sbjct  959   QKIL-MSVEEKIPHL  972


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7446  IALSKL  7429
             IAL KL
Sbjct  273   IALGKL  278


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  4948  LI-----AESEKQS  4922
             LI      ESEK S
Sbjct  292   LIKLLGFSESEKKS  305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4987  NIKQDIT  5007
             + KQ+IT
Sbjct  518   DLKQEIT  524


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  4400  QTKELQKQITKIQNF  4444
             Q KE    +TK+ NF
Sbjct  553   QEKEF---VTKVMNF  564


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4269  TCPI  4258
             TCPI
Sbjct  894   TCPI  897


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3027  KNQYME  3044
             KN+Y E
Sbjct  129   KNEYKE  134


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = +1

Query  5356  LDRGEQEME  5382
             L+RGE ++E
Sbjct  351   LERGE-DLE  358


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  412  FPPGLNR  392
            FPP  NR
Sbjct  383  FPPKVNR  389


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1298  QGFCHPIFY  1272
             Q FC   FY
Sbjct  449   QEFCAAMFY  457


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = +3

Query  7554  FGVA-------LENSFA-PL  7589
             FG+        LE SF  PL
Sbjct  496   FGISTEEIVSMLETSFGFPL  515


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7053  CHMFI  7039
             C MFI
Sbjct  623   CSMFI  627


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4847  YGDSLTQ  4827
             YG SL Q
Sbjct  693   YGTSLSQ  699


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2488  GKCSILPEV  2462
             GKC I  EV
Sbjct  722   GKCDISSEV  730


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2597  LEPFRKQ  2617
             L P+RK+
Sbjct  96    LNPYRKH  102


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2165  WPLTEEKI  2188
             WP   EKI
Sbjct  206   WPESSEKI  213


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7526  IFPQP  7512
             IF QP
Sbjct  216   IFSQP  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2359  PEVLSSL  2339
             P +LSSL
Sbjct  254   PIILSSL  260


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  417  FSFPL  403
            F FPL
Sbjct  511  FGFPL  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6472  IERLII  6455
             IE L+I
Sbjct  575   IEHLVI  580


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5380  PFLALLC  5360
             P LA LC
Sbjct  645   PSLAILC  651


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  2187  IFSSVN-GH  2164
             IF SV  GH
Sbjct  665   IFTSVYFGH  673


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6028  GKCD  6039
             GKCD
Sbjct  722   GKCD  725


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7504  KNPGC  7518
             K PGC
Sbjct  824   KHPGC  828


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6440  AILKCNNK  6463
             A+L CN K
Sbjct  850   AVLICNGK  857


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  146  QTLLVSVE  169
            Q  L SVE
Sbjct  959  QKILMSVE  966


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -2

Query  6522  IPCVHCTVLTFVHGP  6478
             IP  H   LT  HGP
Sbjct  969   IP--H---LTISHGP  978


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3017  EILKEP  3034
             E LK+P
Sbjct  28    ELLKQP  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  685  KQQLTQ  702
            KQ+ TQ
Sbjct  520  KQEITQ  525


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  2542  KHIVLISNP  2516
             KH  L+ NP
Sbjct  745   KHLSLVENP  753


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  6777  AL--LMLQCACL  6748
             AL  LML   CL
Sbjct  772   ALERLMLMYCCL  783


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1546  FLAVC  1532
             FL VC
Sbjct  184   FLNVC  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 0/15 (0%)
 Frame = -2

Query  8916  EMLGGCQTSTLTLLS  8872
             EM G  +TS L LLS
Sbjct  189   EMNGIAETSLLELLS  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  8105  TRIVELLGR  8131
             T   ELL R
Sbjct  196   TSLLELLSR  204


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8968  ELATRDFP  8991
             EL  RD P
Sbjct  200   ELLSRDWP  207


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1595  SFLST  1581
             SFL T
Sbjct  370   SFLTT  374


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1769  RLLLLRGSC  1743
             RLL  RG C
Sbjct  432   RLLQRRGDC  440


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1787  SFNFP  1801
             SF FP
Sbjct  510   SFGFP  514


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5942  HLMHKIE  5922
             H M KIE
Sbjct  711   HPMCKIE  717


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6143  LCVSLK  6160
             LC  LK
Sbjct  819   LCAALK  824


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -1

Query  6274  LTSYACADIERAV  6236
             LTS  C DI  AV
Sbjct  840   LTSDSCKDIA-AV  851


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4981  LGLTMCP  4961
             LGL  CP
Sbjct  890   LGLQTCP  896


>ref|NP_922939.1|  C-type lectin domain family 7 member A isoform c [Homo sapiens]
Length=189

 GENE ID: 64581 CLEC7A | C-type lectin domain family 7, member A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query  2576  GIL-LVILSIPV  2544
             GIL LVIL I V
Sbjct  51    GILCLVILVIAV  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             +SQSNT
Sbjct  21    DSQSNT  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  3646  SQSNNR-AV  3669
             SQSN R AV
Sbjct  22    SQSNTRIAV  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9017  ATPPW  9003
             A PPW
Sbjct  39    ASPPW  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7256  VAPTKA  7273
             V PTKA
Sbjct  104   VTPTKA  109


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  4612  II---TCHLFS  4589
             II    C LFS
Sbjct  125   IIYEKSCYLFS  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7590  LCLGMLV  7610
             LCL  LV
Sbjct  53    LCLVILV  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  787  VLGDMA  770
            VLG MA
Sbjct  63   VLGTMA  68


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -2

Query  312  VKIFGVLTSRRPSP  271
            VK  GVL S  P P
Sbjct  110  VKTTGVLSS--PCP  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  8831  LVTPCEPAW  8857
             L  PC P W
Sbjct  116   LSSPCPPNW  124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5581  EKLDE  5567
             E LDE
Sbjct  8     ENLDE  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/23 (30%), Positives = 8/23 (34%), Gaps = 10/23 (43%)
 Frame = -3

Query  8732  PW----------CVVLLIREVAL  8694
             PW          C V L+  V L
Sbjct  42    PWRLIAVILGILCLVILVIAVVL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             LI +IL
Sbjct  45    LIAVIL  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3053  DPSKDLIAE  3079
             D S +LI +
Sbjct  159   DSSNELISD  167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7143  VVIATM  7160
             VV  TM
Sbjct  62    VVLGTM  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  9030  QSRPGHASLE  9001
             +S P + SLE
Sbjct  92    HSQPTQSSLE  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8331  ILSKPC  8314
             +LS PC
Sbjct  115   VLSSPC  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  30   WELSG*LGNPLLK  68
            W+    LG  LLK
Sbjct  149  WQ----LGSNLLK  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4308  WQYSSTILK  4334
             WQ  S  LK
Sbjct  149   WQLGSNLLK  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  9115  WELSG*LGNPLLK  9153
             W+    LG  LLK
Sbjct  149   WQ----LGSNLLK  157


>sp|Q9NP31.3|SH22A_HUMAN  RecName: Full=SH2 domain-containing protein 2A; AltName: Full=T 
cell-specific adapter protein; Short=TSAd; AltName: Full=VEGF 
receptor-associated protein; AltName: Full=SH2 domain-containing 
adapter protein
Length=389

 GENE ID: 9047 SH2D2A | SH2 domain containing 2A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7426  LLLHYT  7409
             LLLHYT
Sbjct  166   LLLHYT  171


 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 9/31 (29%)
 Frame = -3

Query  1448  CYLAHCFSQNSC---LMAGSSY-SLTCCHHF  1368
             CYL   FS+      L     Y S TCC HF
Sbjct  116   CYLVR-FSESAVTFVL----TYRSRTCCRHF  141


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8078  RLRDLLL  8098
             RL DLLL
Sbjct  162   RLQDLLL  168


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 1/15 (6%)
 Frame = -1

Query  9049  LRARHSPVPPRPRLP  9005
             LR    P+P  P LP
Sbjct  243   LRPK-PPIPAKPQLP  256


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 4/18 (22%)
 Frame = -3

Query  4847  YGDSLTQMPVSFSCMQTP  4794
             YG+ LT+ P      QTP
Sbjct  178   YGETLTE-PLA---RQTP  191


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  9040  RHSPVPPRP  9014
             RH P  PRP
Sbjct  266   RHRP-APRP  273


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3154  FSCFQI  3137
             FS FQI
Sbjct  21    FSTFQI  26


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8056  PVPLQ  8070
             PVP+Q
Sbjct  226   PVPMQ  230


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1095  PPIP  1106
             PPIP
Sbjct  247   PPIP  250


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4929  FSDSAI  4946
             FS+SA+
Sbjct  121   FSESAV  126


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3116  IYQEP  3130
             IY EP
Sbjct  279   IYNEP  283


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  292  HQSPP  278
            HQ PP
Sbjct  356  HQPPP  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3246  ERLL  3257
             ERLL
Sbjct  106   ERLL  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7623  DLLLQ  7609
             DLLL+
Sbjct  165   DLLLH  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4350  PIPPF  4336
             PIP F
Sbjct  17    PIPTF  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5101  SSVSFV  5084
             S V FV
Sbjct  124   SAVTFV  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8139  HPLRP  8125
             HPL P
Sbjct  173   HPLSP  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5360  TEES  5371
             TEES
Sbjct  200   TEES  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  918  QAAMQMLKE  944
            QA   M KE
Sbjct  224  QAPVPMQKE  232


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9043  PSDPAY  9060
             PS+P Y
Sbjct  275   PSNPIY  280


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  289  QSPPL  275
            Q PPL
Sbjct  350  QGPPL  354


>ref|NP_922940.1|  C-type lectin domain family 7 member A isoform d [Homo sapiens]
Length=143

 GENE ID: 64581 CLEC7A | C-type lectin domain family 7, member A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query  2576  GIL-LVILSIPV  2544
             GIL LVIL I V
Sbjct  51    GILCLVILVIAV  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             +SQSNT
Sbjct  21    DSQSNT  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  3646  SQSNNR-AV  3669
             SQSN R AV
Sbjct  22    SQSNTRIAV  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9017  ATPPW  9003
             A PPW
Sbjct  39    ASPPW  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  4612  II---TCHLFS  4589
             II    C LFS
Sbjct  79    IIYEKSCYLFS  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7590  LCLGMLV  7610
             LCL  LV
Sbjct  53    LCLVILV  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  8831  LVTPCEPAW  8857
             L  PC P W
Sbjct  70    LSSPCPPNW  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5581  EKLDE  5567
             E LDE
Sbjct  8     ENLDE  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/23 (30%), Positives = 8/23 (34%), Gaps = 10/23 (43%)
 Frame = -3

Query  8732  PW----------CVVLLIREVAL  8694
             PW          C V L+  V L
Sbjct  42    PWRLIAVILGILCLVILVIAVVL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             LI +IL
Sbjct  45    LIAVIL  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  7143  VVIATM----SP  7166
             VV  TM    SP
Sbjct  62    VVLGTMGVLSSP  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3053  DPSKDLIAE  3079
             D S +LI +
Sbjct  113   DSSNELISD  121


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8331  ILSKPC  8314
             +LS PC
Sbjct  69    VLSSPC  74


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  30   WELSG*LGNPLLK  68
            W+    LG  LLK
Sbjct  103  WQ----LGSNLLK  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4308  WQYSSTILK  4334
             WQ  S  LK
Sbjct  103   WQLGSNLLK  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  9115  WELSG*LGNPLLK  9153
             W+    LG  LLK
Sbjct  103   WQ----LGSNLLK  111


>ref|NP_150594.2|  tripartite motif-containing protein 3 [Homo sapiens]
 ref|NP_006449.2|  tripartite motif-containing protein 3 [Homo sapiens]
Length=744

 GENE ID: 10612 TRIM3 | tripartite motif-containing 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3271  GQFKFR  3254
             GQFKFR
Sbjct  517   GQFKFR  522


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 17/38 (44%), Positives = 17/38 (44%), Gaps = 16/38 (42%)
 Frame = +3

Query  492  TSEGCRQIL-GQLQP-SL------------QTGSEELR  563
            T EG RQ L GQ  P SL             TGS ELR
Sbjct  328  TGEGLRQALVGQ--PASLTVTTKDKDGRLVRTGSAELR  363


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  4822  QSLS---PVCR  4799
             QSL    PVCR
Sbjct  53    QSLTLSCPVCR  63


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/16 (43%), Positives = 12/16 (75%), Gaps = 2/16 (12%)
 Frame = +2

Query  5105  MEQAPE-DQGPQREPH  5149
             M+QAP+  + P+ +PH
Sbjct  89    MQQAPDGAHDPE-DPH  103


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = +3

Query  9108  LSLGALWLTREPTA  9149
             L LGAL LT   TA
Sbjct  310   LNLGAL-LTTSATA  322


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  23   LSLGALWLT  49
            L LGAL LT
Sbjct  310  LNLGAL-LT  317


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9072  KQLLICRI  9049
             KQ L+C I
Sbjct  17    KQFLVCSI  24


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -1

Query  217  FPFRFQVPVRAP  182
            F FRF V  R P
Sbjct  519  FKFRFGVRGRSP  530


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7703  RSVLSL  7686
             RSVL L
Sbjct  307   RSVLNL  312


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  188  GATARDF--PH  162
            GAT R F  PH
Sbjct  616  GATDRHFAGPH  626


 Score = 16.8 bits (32),  Expect(2) = 18107
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7572  FPEQPQ  7555
             FPE P+
Sbjct  286   FPERPH  291


 Score = 15.5 bits (29),  Expect(2) = 18107
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7575  SFPEQ  7561
             SF EQ
Sbjct  253   SFAEQ  257


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  7557  GV-ALENSF  7580
             GV AL+N F
Sbjct  72    GVSALQNNF  80


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 12/50 (24%)
 Frame = +2

Query  7382  TVQARQLLSGIVQQQNN-LLRAIEAQQ-HLLQLT-----VWGI-KQLQAR  7507
             TV    LL  +V+Q+   L R  EA    L QL      V GI  QLQ R
Sbjct  148   TV----LLRDVVEQHKAALQRQLEAVRGRLPQLSAAIALVGGISQQLQER  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3307  VLASHLD  3327
             VL S+LD
Sbjct  233   VLQSQLD  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6588  LITTSSSA  6565
             L TTS  A
Sbjct  315   LLTTSATA  322


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4167  QQAALTV  4147
             Q A LTV
Sbjct  339   QPASLTV  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6176  SSNQC  6162
             S NQC
Sbjct  505   SNNQC  509


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2892  QFNFPT  2875
             QFN PT
Sbjct  668   QFNAPT  673


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4062  SCPV  4051
             SCPV
Sbjct  58    SCPV  61


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5362  CRVTPIL  5342
             CR T IL
Sbjct  62    CRQTSIL  68


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +1

Query  5788  ISALVE-MGVEMGHHAP  5835
             IS L E M     ++AP
Sbjct  82    ISSLMEAM-----QQAP  93


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2801  DGVHNP  2784
             DG H+P
Sbjct  94    DGAHDP  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4462  QQKSTLER  4485
             Q+K  L+R
Sbjct  157   QHKAALQR  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8312  RQGLERI  8332
             RQG E I
Sbjct  242   RQGQEHI  248


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3741  STCSF  3727
             S CSF
Sbjct  250   SSCSF  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2719  MLSQLLY  2699
             +LS LLY
Sbjct  399   LLSVLLY  405


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3467  VTNRGRQK  3490
             V  RGR+K
Sbjct  476   VGSRGREK  483


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7912  IIVSD  7926
             IIV D
Sbjct  683   IIVAD  687


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3255  LNLNCP  3272
             L L CP
Sbjct  55    LTLSCP  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3439  PVSCP  3425
             P SCP
Sbjct  112   PLSCP  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  120  TTDGH  106
            T DGH
Sbjct  722  TSDGH  726


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  1630  LACLSVQSF  1604
             LA L  Q F
Sbjct  278   LAALAAQAF  286


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1543  EIAGP  1557
             EI GP
Sbjct  365   EITGP  369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2740  HTRQK  2754
             H RQK
Sbjct  444   HVRQK  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6569  EEEVVIR  6589
             E+E V R
Sbjct  469   EDELVFR  475


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  404  RGKEK  418
            RG EK
Sbjct  479  RGREK  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8425  SAAGSARLI  8399
             SAA S R +
Sbjct  493   SAASSGRIV  501


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4519  CPFTF  4505
             C FTF
Sbjct  598   CVFTF  602


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5922  VVVASFH  5902
             +VV  FH
Sbjct  636   IVVTDFH  642


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5807  ISTSAD  5790
             I TSA+
Sbjct  706   INTSAE  711


>ref|NP_062556.2|  RNA binding motif protein, X-linked-like 1 [Homo sapiens]
 ref|NP_001156008.1|  RNA binding motif protein, X-linked-like 1 [Homo sapiens]
Length=390

 GENE ID: 494115 RBMXL1 | RNA binding motif protein, X-linked-like 1
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  9046  RARHSPVPPRPR  9011
             R RH P PP PR
Sbjct  91    RGRHGP-PPPPR  101


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = -1

Query  571  YNDLSSSDPV*RDG  530
            Y+D SSS    RDG
Sbjct  310  YDDYSSS----RDG  319


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5830  HGAPSPPPS  5804
             HG P PP S
Sbjct  94    HGPPPPPRS  102


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -1

Query  7189  SSSRSEDL  7166
             SSSRS DL
Sbjct  328   SSSRS-DL  334


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8108  RIVELL  8125
             RIVE L
Sbjct  33    RIVEVL  38


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1142  SQDYPS  1125
             S DYPS
Sbjct  222   SRDYPS  227


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5243  YETYGD  5260
             YE YG+
Sbjct  285   YESYGN  290


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7208  RSELY  7222
             RS+LY
Sbjct  331   RSDLY  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5025  IVEIL  5011
             IVE+L
Sbjct  34    IVEVL  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  6245  FNISTSIRG  6271
             FN S S RG
Sbjct  138   FNMSSS-RG  145


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4704  YRHHYES  4724
             YR  YES
Sbjct  281   YRDSYES  287


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  514  YWDSY  528
            Y DSY
Sbjct  281  YRDSY  285


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  7710  KNRKTSKKR  7736
             K+R T K R
Sbjct  41    KDRETNKSR  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8903  PPSISSRGP  8929
             PP   SRGP
Sbjct  97    PPPPRSRGP  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6701  RGPGRAF  6721
             RGP R F
Sbjct  103   RGPPRGF  109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8931  LGPRDE  8914
             L PRD+
Sbjct  207   LSPRDD  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  289  GEYAKNFD  312
            G Y  NF+
Sbjct  132  GGYSMNFN  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1382  MSGSR  1396
             MS SR
Sbjct  140   MSSSR  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  8467  APCFSRSRD  8441
             AP  SR RD
Sbjct  181   AP-LSRGRD  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  2212  RDGKGRE  2232
             RDG GR+
Sbjct  263   RDGYGRD  269


>ref|NP_647538.1|  attractin isoform 2 [Homo sapiens]
Length=1272

 GENE ID: 8455 ATRN | attractin [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1159  ECIALP  1176
             ECIALP
Sbjct  779   ECIALP  784


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = -3

Query  992  MHWMHSIP----FCSFL  954
            ++WM S P    FC  L
Sbjct  880  LQWMPSEPSDAGFCGIL  896


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 9/26 (34%)
 Frame = -2

Query  3603  NAY--------C-ESVTMFTSNPESC  3553
             NAY        C E  TM T  PE C
Sbjct  962   NAYVASFPFGQCMEWYTMSTCPPENC  987


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6885  TISGSPPEDC  6856
             T S  PPE+C
Sbjct  978   TMSTCPPENC  987


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1007  CNRPC  993
             C+RPC
Sbjct  101   CDRPC  105


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 7/20 (35%)
 Frame = -1

Query  7120  CNI**TSNLSTDGRGIHCFS  7061
             CN       S D RG  CFS
Sbjct  299   CN-------SSDVRGCSCFS  311


 Score = 18.0 bits (35),  Expect(2) =  7075
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8963  TSSLLQ  8980
             T SLLQ
Sbjct  876   TNSLLQ  881


 Score = 15.9 bits (30),  Expect(2) =  7075
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  9040  EPSD  9051
             EPSD
Sbjct  886   EPSD  889


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4969  MCPN  4958
             MCPN
Sbjct  249   MCPN  252


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1533  HTARNCRAP  1559
             H A  CR P
Sbjct  924   HSAKQCRTP  932


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -3

Query  6410  ELAQR--IPLDRPV  6375
             +LA R   PL+R V
Sbjct  373   DLASREWLPLNRSV  386


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  5958  VSYALASDAQ  5929
             +S ALA D Q
Sbjct  676   ISWALATDEQ  685


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8537  LLLLL  8523
             LLLLL
Sbjct  61    LLLLL  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1444  TWLI  1433
             TWLI
Sbjct  159   TWLI  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2404  KISNS  2418
             KISNS
Sbjct  261   KISNS  265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3037  TWSVL  3051
             TWS+L
Sbjct  486   TWSIL  490


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  5231  LSHGAK  5214
             +SHGAK
Sbjct  579   MSHGAK  584


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6496  QHSTMY  6513
             + STMY
Sbjct  622   HNSTMY  627


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3810  CSSWAL  3793
             C SWAL
Sbjct  675   CISWAL  680


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SEG+IS
Sbjct  735   SEGQIS  740


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5893  GTCVEGS  5913
             G C+EGS
Sbjct  1014  GKCIEGS  1020


 Score = 16.3 bits (31),  Expect(2) = 17284
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3658  NRAVN  3672
             NR VN
Sbjct  383   NRSVN  387


 Score = 15.5 bits (29),  Expect(2) = 17284
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3677  KEKVYL  3694
             K+K+Y+
Sbjct  401   KDKIYM  406


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  329  ERDGCESV  352
            ERDG E V
Sbjct  209  ERDGNETV  216


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4502  WKGE  4513
             WKGE
Sbjct  277   WKGE  280


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1370  NDDSMS  1387
             ND SMS
Sbjct  575   NDTSMS  580


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 12/29 (41%)
 Frame = -3

Query  1433  CFSQNSCLMAGSSYSLTCCHHFF*CSRWS  1347
             CFS +   MA   Y          C RWS
Sbjct  585   CFSSD--FMA---YDIA-------CDRWS  601


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  5123  DQGPQREPHNE  5155
             DQ  Q EP N+
Sbjct  768   DQNCQWEPRNQ  778


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +1

Query  4411  IT--KTNYKNSK  4440
             IT  K NY N K
Sbjct  802   ITTAKENYDNAK  813


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1609  SFIWCP  1592
             SFI CP
Sbjct  1056  SFIHCP  1061


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/22 (36%), Positives = 8/22 (36%), Gaps = 7/22 (31%)
 Frame = +1

Query  5971  CLGHTCLCTHRPQPTRSSIGKC  6036
             C GH  LC           GKC
Sbjct  1111  CNGHASLCN-------TNTGKC  1125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5516  MAGRSG  5533
             +AGRSG
Sbjct  22    LAGRSG  27


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6475  NRTMY  6489
             N TMY
Sbjct  623   NSTMY  627


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4850  FYGD  4839
             FYGD
Sbjct  1096  FYGD  1099


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4906  ISWSAS  4889
             I W AS
Sbjct  1207  ITWAAS  1212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7214  ELYKYKV  7234
             +LY Y V
Sbjct  533   DLYRYDV  539


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6858  CLKI  6847
             CLKI
Sbjct  799   CLKI  802


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5498  FVMKQ  5484
             FV+KQ
Sbjct  834   FVLKQ  838


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1428  EAMSQVTNS  1454
             E MS  TNS
Sbjct  870   EDMSPFTNS  878


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8022  PFTN  8011
             PFTN
Sbjct  874   PFTN  877


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6179  HSSNQC  6162
             HS  QC
Sbjct  924   HSAKQC  929


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3137  NLKTGK  3154
             NL TGK
Sbjct  1082  NLTTGK  1087


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -1

Query  7462  MLLRLNSPQQIVLLL  7418
             +LL L SP    LLL
Sbjct  63    LLLLLLSPPLLLLLL  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5433  FRLT  5422
             FRLT
Sbjct  136   FRLT  139


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  8752  SGYLTPGPG  8726
             SG+ T GPG
Sbjct  142   SGFVTDGPG  150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6032  NVTENFNM  6055
             N+T  F+M
Sbjct  242   NITYSFDM  249


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3358  LSEIMV  3375
             LS+I+V
Sbjct  637   LSDILV  642


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  753  PGCS  742
            PGCS
Sbjct  316  PGCS  319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2420  VLLLIF  2403
             V+L IF
Sbjct  460   VMLVIF  465


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8730  GPGVR  8744
             GPG+R
Sbjct  661   GPGIR  665


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6694  TDSFSC  6677
             TD +SC
Sbjct  708   TDCYSC  713


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  786  TLNAWV  803
            TL  WV
Sbjct  852  TLTPWV  857


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3622  LCLNDS  3605
             +CL DS
Sbjct  1046  MCLEDS  1051


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4000  YQDNFS  3983
             Y D FS
Sbjct  1234  YKDSFS  1239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8028  KDPFTN  8011
             KD F N
Sbjct  1235  KDSFSN  1240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  271  RRGAAT  288
            RR AAT
Sbjct  14   RRTAAT  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9006  GRRGLG  9023
             GR GLG
Sbjct  39    GRPGLG  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6774  LLMLQC  6757
             LL+L C
Sbjct  74    LLLLPC  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8558  RCDWKT  8541
             RC W T
Sbjct  665   RCVWNT  670


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  263  CALQQ  249
            CAL Q
Sbjct  765  CALDQ  769


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2825  IVLPE  2839
             I LPE
Sbjct  781   IALPE  785


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2482  CSILPE  2465
             C IL E
Sbjct  893   CGILSE  898


>sp|Q8NFZ5.1|TNIP2_HUMAN  RecName: Full=TNFAIP3-interacting protein 2; AltName: Full=Fetal 
liver LKB1-interacting protein; AltName: Full=A20-binding 
inhibitor of NF-kappa-B activation 2; Short=ABIN-2
Length=429

 GENE ID: 79155 TNIP2 | TNFAIP3 interacting protein 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 13/26 (50%)
 Frame = +3

Query  8829  SLLHPVSLHGMDDPEREVLEWRFDSR  8906
             SLLH VS             WR DSR
Sbjct  333   SLLHQVS-------------WRQDSR  345


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/15 (53%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = +1

Query  5707  LRQRKIDRLIDRLIE  5751
             +RQ  I+RL +RL E
Sbjct  90    MRQ-EIERLTERLEE  103


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +1

Query  5734  IDRLIERAEDSGNESE  5781
             I+RL ER E+   E E
Sbjct  94    IERLTERLEE--KERE  107


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 8/23 (34%)
 Frame = -1

Query  7474  ELQQMLLRLNSPQ-----QIVLL  7421
             E+QQ+   L  PQ     ++VLL
Sbjct  107   EMQQL---LSQPQHEREKEVVLL  126


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4847  RMEEKE  4864
             R+EEKE
Sbjct  100   RLEEKE  105


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2725  QQMLSQ  2708
             QQ+LSQ
Sbjct  109   QQLLSQ  114


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6453  VIIRRSM  6473
             V  RRSM
Sbjct  124   VLLRRSM  130


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  3382  RERTHSR  3402
             RER +SR
Sbjct  317   RERAQSR  323


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  623  HQGSFRQD  646
            HQ S RQD
Sbjct  336  HQVSWRQD  343


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  82   CLECF  96
            CL+CF
Sbjct  408  CLQCF  412


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -1

Query  8452  RSR------DAAPTL  8426
             R R      DAAP L
Sbjct  49    RARLAALEGDAAPSL  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5584  IEKLDE  5567
             IEKL E
Sbjct  203   IEKLQE  208


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8391  RERMRRAE  8414
             RE +RR E
Sbjct  75    REQLRRQE  82


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  6702  EDQGEHLL  6725
             ++QGE LL
Sbjct  414   DEQGEELL  421


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4274  DQAEH  4288
             DQ EH
Sbjct  188   DQSEH  192


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +2

Query  1880  ADDTVLEEMSLPGRWKP  1930
             AD   LE M  PG W P
Sbjct  364   AD--ALELM-VPGGWRP  377


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  5537  SDE---ELIR  5557
             SDE   EL R
Sbjct  413   SDEQGEELLR  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6472  IERL  6461
             IERL
Sbjct  94    IERL  97


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = +2

Query  6011  PQ-----EVVL  6028
             PQ     EVVL
Sbjct  115   PQHEREKEVVL  125


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3507  TQQIRR  3524
             T+Q RR
Sbjct  151   THQLRR  156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3717  ELEE  3728
             ELEE
Sbjct  326   ELEE  329


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1000  LLHQ  1011
             LLHQ
Sbjct  334   LLHQ  337


 Score = 15.5 bits (29),  Expect(2) = 46227
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8968  ELATRD  8985
             +LA RD
Sbjct  37    QLAARD  42


 Score = 15.1 bits (28),  Expect(2) = 46227
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8927  PRAA  8938
             PRAA
Sbjct  14    PRAA  17


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8652  QRRQDI  8669
             Q RQ+I
Sbjct  89    QMRQEI  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  638  RQDRGRA  658
            R DR RA
Sbjct  314  RADRERA  320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3521  SDLLC  3507
             SD LC
Sbjct  140   SDVLC  144


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3788  IDKAQDE  3808
             I+K Q+E
Sbjct  203   IEKLQEE  209


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  8183  QELKNSAVSLL  8215
             QEL     SLL
Sbjct  325   QELEEKVASLL  335


>ref|NP_060213.2|  dipeptidyl peptidase 8 isoform 2 [Homo sapiens]
Length=782

 GENE ID: 54878 DPP8 | dipeptidyl-peptidase 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 11/25 (44%)
 Frame = +2

Query  4370  RIVDIIATDIQTKELQKQITKIQNF  4444
             RI+D+I  D   KEL      IQ F
Sbjct  339   RIIDVI--D---KEL------IQPF  352


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 11/25 (44%)
 Frame = -2

Query  4800  DPNMLLLPI*HPLVGCVLLNLFLDE  4726
             +PN LLL     L G      FLDE
Sbjct  705   EPNRLLL-----LHG------FLDE  718


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 17/28 (60%)
 Frame = -1

Query  2539  HIVLISNPWCLIVYTRYGKCSILPEVFI  2456
             +IVLIS                 PE FI
Sbjct  387   QIVLIS-----------------PELFI  397


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1769  RLLLLRG  1749
             RLLLL G
Sbjct  708   RLLLLHG  714


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 23/43 (53%)
 Frame = +3

Query  4599  WQVM------IVWQVDRMRIRTWKSLV-----K-----HHMYV  4679
             W+V+      I  QVD  R R    LV     K     HH+YV
Sbjct  503   WEVLGRHGSNI--QVDEVR-R----LVYFEGTKDSPLEHHLYV  538


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3190  KTINR  3204
             KTINR
Sbjct  104   KTINR  108


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6919  EKFPS  6905
             EKFPS
Sbjct  700   EKFPS  704


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
 Frame = +1

Query  5323  ELGVDI---AE*ALLDRGEQEMEPVD-PRLEP  5406
             +LGV+I   A+       E+  E  D P LEP
Sbjct  9     QLGVEIFETAD------CEENIESQDRPKLEP  34


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1694  WSALKK  1677
             WS LKK
Sbjct  42    WSQLKK  47


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3358  LSEIMV  3375
             +SEIM+
Sbjct  329   MSEIMI  334


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 14/28 (50%)
 Frame = -2

Query  2244  IFEIFPSFSISVQ-----ISTNAFIFSS  2176
             IF +FP      Q     I    FIF S
Sbjct  436   IFHVFP------QSHEEEI---EFIFAS  454


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  1394  YSLTCC--HH--FF  1365
             YS  CC  +H  FF
Sbjct  555   YSHSCCISQHCDFF  568


 Score = 17.2 bits (33),  Expect(2) = 12338
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4705  IDITMKALIQ  4734
             ID+  K LIQ
Sbjct  341   IDVIDKELIQ  350


 Score = 15.9 bits (30),  Expect(2) = 12338
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4737  ISSEVHIPLGD  4769
             IS E  IP  D
Sbjct  391   ISPELFIPVED  401


 Score = 18.0 bits (35),  Expect(2) = 12340
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  5348  YSAMSTPNSEN  5316
             Y AMS  N EN
Sbjct  85    YLAMSGENREN  95


 Score = 15.1 bits (28),  Expect(2) = 12340
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIY L
Sbjct  82    RIYYL  86


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5740  RLIERAEDS  5766
             RLIE   DS
Sbjct  408   RLIESVPDS  416


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2299  TVFFLYG  2279
             TV F YG
Sbjct  648   TVLFIYG  654


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3242  ILLCFL  3225
             ILL FL
Sbjct  727   ILLSFL  732


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7154  NNESEI  7171
             N+ESE+
Sbjct  290   NDESEV  295


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  1972  LSYFDKTSNSP  1940
             L YF+ T +SP
Sbjct  521   LVYFEGTKDSP  531


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  5082  VTKLTEDR  5105
             VT LT DR
Sbjct  547   VTRLT-DR  553


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 6/19 (31%)
 Frame = +2

Query  6545  LLLNGSLAEEEVVIRSVNF  6601
             LLL G L E       V F
Sbjct  710   LLLHGFLDE------NVHF  722


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2587  HATLEY  2570
             +ATL+Y
Sbjct  124   QATLDY  129


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1196  LSYVQN  1179
             L YV+N
Sbjct  233   LTYVHN  238


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2894  PNSISPL  2874
             P+S+ PL
Sbjct  414   PDSVTPL  420


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3620  QPDQSE  3637
             +PDQ E
Sbjct  682   HPDQNE  687


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3407  ETFYVD  3424
             E FYV+
Sbjct  33    EPFYVE  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7036  LFYS  7025
             LFYS
Sbjct  97    LFYS  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5540  DEELIR  5557
             +EEL R
Sbjct  135   EEELLR  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6498  LTFVH  6484
             LT+VH
Sbjct  233   LTYVH  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7641  ITRPGW  7658
             I R GW
Sbjct  362   IARAGW  367


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6747  IFPIFP  6730
             IF +FP
Sbjct  436   IFHVFP  441


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  3722  GGNEQVD---KLV  3751
             G N QVD    LV
Sbjct  510   GSNIQVDEVRRLV  522


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6140  PLCVSL  6157
             P CVSL
Sbjct  578   PHCVSL  583


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8112  LWNFWDAG  8135
             LW F D G
Sbjct  667   LWIFYDTG  674


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5707  LRQRK  5721
             LR+RK
Sbjct  139   LRERK  143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  477  PGLLETS  497
            P L ETS
Sbjct  188  PNLVETS  194


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2004  CPQISM  1987
             CP I M
Sbjct  195   CPNIRM  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -3

Query  6851  RLLFYYFQIVL  6819
             RL     QIVL
Sbjct  385   RL-----QIVL  390


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8117  ELLGRRG  8137
             E LGR G
Sbjct  504   EVLGRHG  510


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1580  FPTALF  1563
             +PT LF
Sbjct  646   YPTVLF  651


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -2

Query  6906  PQLKLCVTISGSP  6868
             PQ    V I G P
Sbjct  656   PQ----VAIAGAP  664


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3737  LVHFLQ  3720
             L H+LQ
Sbjct  764   LLHYLQ  769


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8391  RERMR  8405
             RER R
Sbjct  140   RERKR  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  144  GISSY  130
            GI SY
Sbjct  149  GIASY  153


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+++D
Sbjct  397   IPVEDD  402


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3044  VYYDPSKD  3067
             VY++  KD
Sbjct  522   VYFEGTKD  529


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  4164  QAALTVAPVKL  4132
             Q A   APV L
Sbjct  657   QVAIAGAPVTL  667


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  3760  NQESTIF  3780
             N E T F
Sbjct  92    NRENTLF  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  4502  RGALLVLS  4479
             R A L LS
Sbjct  108   RAAVLMLS  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5254  WGYLGRSGS  5280
             W  LGR GS
Sbjct  503   WEVLGRHGS  511


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6640  CVQLY  6626
             CV LY
Sbjct  580   CVSLY  584


>ref|NP_003153.2|  striatin [Homo sapiens]
Length=780

 GENE ID: 6801 STRN | striatin, calmodulin binding protein [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/15 (66%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = -3

Query  302  LAYSPVAA-PRLLPC  261
            LAYS  AA  RLL C
Sbjct  575  LAYS--AAHQRLLSC  587


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  2821  AYSAARKRQLDC  2856
             AYSAA  R L C
Sbjct  576   AYSAAHQRLLSC  587


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  612  EIKDTKEAL  638
            E  DTKEAL
Sbjct  277  EDRDTKEAL  285


 Score = 18.9 bits (37),  Expect(2) =  2031
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7494  CLMPQ  7480
             CLMP+
Sbjct  316   CLMPE  320


 Score = 18.0 bits (35),  Expect(2) =  2031
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  7471  LQQML--LR  7451
             LQ ML  LR
Sbjct  354   LQDMLANLR  362


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  940  KRPSMRKLQN  969
            KRP   KLQ+
Sbjct  347  KRPNRSKLQD  356


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  1637  REDL----AFLQG  1663
             R +L    AFLQG
Sbjct  74    RAELQAQIAFLQG  86


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5832  SMVPHL  5815
             SMV HL
Sbjct  701   SMVAHL  706


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  403  QGERK  417
            QGERK
Sbjct  85   QGERK  89


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7388  QARQLL  7405
             Q RQLL
Sbjct  157   QGRQLL  162


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = +2

Query  728  LPYSAEHP-----GANGT  766
            L YSA H       A+GT
Sbjct  575  LAYSAAHQRLLSCSADGT  592


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 23/44 (52%)
 Frame = -1

Query  5326  ILKMDKQQ--L-LQ-------NSYYGFHSC--------PSIPIS  5249
             I  M+ QQ  L L+       NS     SC        P  PIS
Sbjct  641   IFNMETQQRILTLESNVDTTANS-----SCQINRVISHPTLPIS  679


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6573  SSARLP  6556
             SS RLP
Sbjct  381   SSSRLP  386


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2687  HRTKIEE  2707
             HR K EE
Sbjct  747   HRKKFEE  753


 Score = 16.8 bits (32),  Expect(2) = 14836
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5839  DVDDL  5853
             DVD+L
Sbjct  363   DVDEL  367


 Score = 15.9 bits (30),  Expect(2) = 14836
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5836  WDVD  5847
             W+VD
Sbjct  322   WNVD  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  5174  EELKNEAVRHFPRI  5215
             E LK + VR   RI
Sbjct  92    ENLKKDLVR---RI  102


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 4/19 (21%)
 Frame = +2

Query  7493  QLQARI--LAVERYLKDQQ  7543
             +LQA I  L  ER  K Q+
Sbjct  76    ELQAQIAFLQGER--KGQE  92


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1070  TNRMDDK  1090
             T+R DDK
Sbjct  194   TDREDDK  200


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  541  RQDQKNLD  564
            R+D KN D
Sbjct  196  REDDKNQD  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5494  TKALGI  5511
             TK LGI
Sbjct  611   TKELGI  616


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  127  LVTRDPS  147
            LV  DPS
Sbjct  622  LVSSDPS  628


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8422  AAGSAR  8405
             AAG AR
Sbjct  39    AAGAAR  44


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             ELQ QI
Sbjct  76    ELQAQI  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  6211  DNGERRDKK  6237
             D GE RD K
Sbjct  274   DSGEDRDTK  282


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6812  KLREQF  6829
             KL EQ+
Sbjct  331   KLKEQY  336


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6122  ALGFDPI  6102
             AL F PI
Sbjct  468   ALAFHPI  474


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  7499  QARILAVE  7522
             Q RIL  E
Sbjct  647   QQRILTLE  654


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6179  DTNTNSS  6199
             DT  NSS
Sbjct  658   DTTANSS  664


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  3029  EPVHGVYYDPSK  3064
             E +H V + PSK
Sbjct  753   ESIHDVAFHPSK  764


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2851  PAVFF  2837
             P VFF
Sbjct  7     PGVFF  11


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2221  KGRENFK  2241
             KG EN K
Sbjct  89    KGQENLK  95


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  3248  KT--PKFKL  3268
             KT  PKF L
Sbjct  451   KTWNPKFTL  459


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  4938  SAIRKALLGH  4967
             S  R  LLGH
Sbjct  559   SVLRGPLLGH  568


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2735  VPTSTDVVS  2709
             +P S D VS
Sbjct  616   IPASVDLVS  624


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6481  SCSIERLI  6458
             SC I R I
Sbjct  664   SCQINRVI  671


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  397  NRIFSH  380
            NR+ SH
Sbjct  668  NRVISH  673


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  172  SLAVAP  189
            SLAV P
Sbjct  711  SLAVDP  716


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1140  PGLSIF  1123
             P LS+F
Sbjct  603   PALSVF  608


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1181  NAGRAIHS  1158
             N G  IHS
Sbjct  694   NTGKLIHS  701


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1412  LMAGS  1398
             LM GS
Sbjct  721   LMSGS  725


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  441  WASRELER  464
            WA  E ER
Sbjct  60   WARFEVER  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1062  LQEQI  1076
             LQ QI
Sbjct  77    LQAQI  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  524  LSQYL  510
            L QYL
Sbjct  162  LRQYL  166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -3

Query  3563  PNPAKL-DKL  3537
             PN  KL D L
Sbjct  349   PNRSKLQDML  358


>gb|AAH00641.2|  MYBBP1A protein [Homo sapiens]
Length=566

 GENE ID: 10514 MYBBP1A | MYB binding protein (P160) 1a [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = +3

Query  6456  IIRRSM-------EQD  6482
             IIRRS+       EQD
Sbjct  93    IIRRSLRSSSSKQEQD  108


 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 7/19 (36%)
 Frame = -2

Query  4842  RLPD-P------NASLFLL  4807
             R PD P      NASL+LL
Sbjct  151   RQPDSPTALYHFNASLYLL  169


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  854  SIIRRS  871
            SIIRRS
Sbjct  92   SIIRRS  97


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  4447  GLLQGQQKS  4473
             G LQGQQ S
Sbjct  348   GVLQGQQQS  356


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6023  VLVNVTEN  6046
             VL  VTEN
Sbjct  297   VLAKVTEN  304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +2

Query  5141  EPHNEWTLELLEEL  5182
             +P N   LELLE L
Sbjct  77    QPENALVLELLEPL  90


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5756  QKTVAMR  5776
             QKT  MR
Sbjct  273   QKTLSMR  279


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5758  EDSGNESE  5781
             EDS NE E
Sbjct  11    EDSENEEE  18


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  204  FRSLFGRH  181
            F SLF RH
Sbjct  236  FLSLFSRH  243


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  8164  SPTVLESGTK  8193
             SP  L+SG K
Sbjct  546   SPSLLQSGAK  555


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8083  ERLTLD  8100
             E LTLD
Sbjct  337   EKLTLD  342


 Score = 18.5 bits (36),  Expect(2) =  9505
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  137  LVTRV  123
            LVTRV
Sbjct  211  LVTRV  215


 Score = 15.5 bits (29),  Expect(2) =  9505
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  248  AESCV  234
            AE CV
Sbjct  177  AEGCV  181


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  9091  ETQYRQKA  9068
             ETQ  QKA
Sbjct  183   ETQEKQKA  190


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4202  REFQI  4188
             R+FQI
Sbjct  60    RDFQI  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5344  LLCRHPIL  5321
             L  RHP+L
Sbjct  239   LFSRHPVL  246


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 12/26 (46%)
 Frame = +1

Query  5071  LC------LVLRN*QRIDGTSPRRPR  5130
             LC      LV    Q I  T P RPR
Sbjct  246   LCQSLLPILV----QHI--TGPVRPR  265


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  394  RIFSH  380
            RIF H
Sbjct  115  RIFTH  119


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1416  RVLAEA  1433
             RVL EA
Sbjct  306   RVLGEA  311


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7507  SCLELLD  7487
             S LELL+
Sbjct  322   SSLELLN  328


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +2

Query  5150  NEWTLELLEELKNEA  5194
             NE      EEL +EA
Sbjct  15    NE------EELGDEA  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  3914  GE---AMHGQVD  3940
             GE   A+H QV+
Sbjct  132   GERAGALHAQVE  143


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  1137  LGLNKIVRMYS  1169
             L LN + R YS
Sbjct  207   LDLNLVTRVYS  217


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = +1

Query  8305  KNKTGLGK------DFAIR  8343
             KNK  L K      DF IR
Sbjct  49    KNK--LQKEKALRRDFQIR  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1187  VQNAGR  1170
             VQ AGR
Sbjct  146   VQQAGR  151


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7507  SCLEL  7493
             SCL+L
Sbjct  205   SCLDL  209


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  9049  DPAYKQLL  9072
             DP  KQL+
Sbjct  287   DPEWKQLM  294


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5825  TMLLGML  5845
             T LLG L
Sbjct  344   TVLLGVL  350


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  463  RSSSLL  446
            RS SLL
Sbjct  545  RSPSLL  550


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3734  QVDKLV  3751
             QV+ LV
Sbjct  141   QVERLV  146


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  7481  WGIKQLQARILA  7516
             W  KQL   +LA
Sbjct  290   W--KQLMGQVLA  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  541  RQDQKN  558
            R D+KN
Sbjct  45   RRDEKN  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +2

Query  3629  QSESELVNQIIEQL  3670
             Q E  LV +  E L
Sbjct  77    QPENALVLELLEPL  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8924  GPRAAS  8941
             GP AAS
Sbjct  200   GPQAAS  205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +2

Query  5162  LELLEEL----KNE  5191
             LELL  L    K E
Sbjct  324   LELLNVLFRTCKHE  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  3602  LGIIQAQPDQS  3634
             LG+ Q Q  QS
Sbjct  347   LGVLQGQ-QQS  356


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6730  RKNRKYE  6750
             RK RK E
Sbjct  419   RKKRKSE  425


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  127  LVTRDPS  147
            LV R PS
Sbjct  542  LVIRSPS  548


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8517  EAQEEEEVG  8543
             + + EEE G
Sbjct  12    DSENEEELG  20


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  994   QGLLHQ-AR  1017
             Q LLH  AR
Sbjct  107   QDLLHKTAR  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7485  PQTVSC  7468
             PQ  SC
Sbjct  201   PQAASC  206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3874  KRNS  3885
             KRNS
Sbjct  226   KRNS  229


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8404  LILSLTV  8384
             L L LTV
Sbjct  339   LTLDLTV  345


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1585  ERKDTK  1602
             E KD K
Sbjct  388   EKKDAK  393


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2750  KKHQK  2764
             KK QK
Sbjct  491   KKNQK  495


>gb|AAC98380.1|  complement protein C4B frameshift mutant [Homo sapiens]
Length=354

 GENE ID: 721 C4B | complement component 4B (Chido blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  378  RWEKIRLRPG  407
            RW+  RLRPG
Sbjct  329  RWQ-TRLRPG  337


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  191   AFVTI  195


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  135   SLAQEQV  141


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  13    DPNM  16


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  77    DKTEQW  82


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  67    APTLAA  72


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6456  IIRRSME  6476
             +I RSM+
Sbjct  171   VIHRSMQ  177


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -3

Query  278  PRLL-----PC  261
            PRLL     PC
Sbjct  293  PRLLATHPTPC  303


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4216  TLGIVGNS  4193
             TL I GNS
Sbjct  5     TLDIPGNS  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  38   GSEGAL  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  149   QETSNW----LLSQ  158


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  94    VDLI---------QKGYMRIQQFR  108


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  136   LAQEQVG  142


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1548  CRAPR  1562
             CR PR
Sbjct  290   CRPPR  294


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5425  QPKTACTNCY  5454
             QP   CT C+
Sbjct  314   QPTPCCTSCF  323


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  71    AASRYLDK  78


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2378  PHPAGLK  2398
             P+P GLK
Sbjct  306   PQPCGLK  312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41   WLTRE  55
            WL R+
Sbjct  117  WLSRD  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  117   WLSRD  121


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  128   AFVLK  132


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  129   FVLKVL  134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  201   LAVFQ  205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  262   HNNLMAMA  269


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5821  PSPPPSPQ  5798
             P P P PQ
Sbjct  300   PTPCPRPQ  307


>ref|NP_037434.1|  eukaryotic elongation factor 2 kinase [Homo sapiens]
Length=725

 GENE ID: 29904 EEF2K | eukaryotic elongation factor-2 kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  3757  WNQESTIF  3780
             W+QES +F
Sbjct  546   WDQESAVF  553


 Score = 18.9 bits (37),  Expect(2) =  1337
 Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 42/78 (53%)
 Frame = +3

Query  1299  LVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLA----------------E  1430
             L Q A    KTIL       T EE    C   G P    R L                 E
Sbjct  342   LLQSA----KTILRG-----T-EEK---C---GSP--RVRTLSGSRPPLLRPLSENSGDE  383

Query  1431  AMSQVT--------NSAT  1460
              MS VT         SAT
Sbjct  384   NMSDVTFDSLPSSPSSAT  401


 Score = 18.9 bits (37),  Expect(2) =  1337
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1535  HSQKL  1549
             HSQKL
Sbjct  403   HSQKL  407


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 4/17 (23%)
 Frame = +2

Query  5510  SPMAGR---S-GDSDEE  5548
             SP AG    S GDSD+E
Sbjct  18    SPRAGHDGDSDGDSDDE  34


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6736  NRKYE  6750
             NRKYE
Sbjct  465   NRKYE  469


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  8859  MDDPE-RE  8879
             +DDPE RE
Sbjct  451   LDDPEPRE  458


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = -1

Query  4141  GEIAAIVS---MY  4112
             GE  AIV    MY
Sbjct  562   GELEAIVGLGLMY  574


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5974  NIMYLCII  5951
             +IM +CII
Sbjct  208   DIMQMCII  215


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  559  LDHYI  573
            L+HYI
Sbjct  228  LEHYI  232


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7869  AKTILKPT  7846
             AKTIL  T
Sbjct  346   AKTILRGT  353


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 6/13 (46%)
 Frame = +2

Query  5516  MAGRSGDSDEELI  5554
             MA      DE+LI
Sbjct  1     MA------DEDLI  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5401  EPWKH  5415
             E WKH
Sbjct  83    EAWKH  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  9035  LPS-PAQATP  9009
             LPS P  ATP
Sbjct  393   LPSSPSSATP  402


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7658  EWDRE  7672
             EWD E
Sbjct  545   EWDQE  549


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3802  LGLIYS  3785
             LGL YS
Sbjct  570   LGLMYS  575


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8041  PDKCQ  8027
             PD CQ
Sbjct  628   PDRCQ  632


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8030  PRIRSL  8013
             PR+R L
Sbjct  360   PRVRTL  365


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = -2

Query  7809  HSQFVMLNQFHKLAHL  7762
             HSQ        KL HL
Sbjct  403   HSQ--------KLDHL  410


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6197  SSGRMIMEK  6223
             SSGR   EK
Sbjct  477   SSGRVCVEK  485


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +2

Query  3806  EH--E----KYHSN  3829
             EH  E    KY SN
Sbjct  229   EHYIEGKYIKYNSN  242


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4809  LYADP  4795
             LY DP
Sbjct  281   LYTDP  285


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5758  EDSGNE  5775
             E+SG+E
Sbjct  378   ENSGDE  383


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2056  SNYV  2045
             SNYV
Sbjct  165   SNYV  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6361  HLSHY  6375
             HL HY
Sbjct  227   HLEHY  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3131  MALDKFDMS  3105
             M L  FD+S
Sbjct  321   MGLAPFDLS  329


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1686  SEENSL  1669
             S+E+SL
Sbjct  470   SDEDSL  475


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1974  MIRY  1985
             M+RY
Sbjct  530   MVRY  533


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  3710  VLVPMPDRPF  3681
             VL+ M   PF
Sbjct  129   VLIKMASQPF  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7470  CNRCC  7456
             CNR C
Sbjct  314   CNRIC  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1599  QMKDCTE  1619
             +M DC E
Sbjct  646   EMTDCDE  652


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  853  QHYQK  867
            Q YQK
Sbjct  711  QYYQK  715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8446  ETWKNMEQ  8469
             E W  ME+
Sbjct  718   EAWAQMEE  725


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  208  ERETR  222
            ER TR
Sbjct  110  ERATR  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8282  RAIRH  8296
             RA RH
Sbjct  111   RATRH  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3428  AANRETKL  3451
             A N  TKL
Sbjct  335   AVNQNTKL  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3190  KTINRG  3207
             KTI RG
Sbjct  347   KTILRG  352


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4891  SSGSTCV  4871
             SSG  CV
Sbjct  477   SSGRVCV  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9085  QYRQKA  9068
             QY QKA
Sbjct  711   QYYQKA  716


>ref|NP_001138620.1|  corticotropin-releasing factor receptor 1 isoform 4 [Homo sapiens]
Length=401

 GENE ID: 1394 CRHR1 | corticotropin releasing hormone receptor 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 12/25 (48%)
 Frame = +1

Query  7105  FIKYY---------RAAINKRW--W  7146
             FI Y+         R AI KRW  W
Sbjct  344   FI-YFNSFLESFQVRSAIRKRWHRW  367


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1445  YLAHCFS  1425
             YL HC S
Sbjct  124   YLGHCIS  130


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4563  LLGTTFM  4543
             LLG T+M
Sbjct  322   LLGITYM  328


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6944  NSTWF  6958
             N TWF
Sbjct  166   NATWF  170


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7109  SNITGL  7126
             SNI GL
Sbjct  37    SNISGL  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7781  NWFNITNWLW  7810
             N F +TN  W
Sbjct  196   NYFHVTNFFW  205


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VT+FF
Sbjct  200   VTNFF  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  4727  RAFIVMSIKPSP---SF  4686
             RA   MSI  SP   SF
Sbjct  379   RA---MSIPTSPTRVSF  392


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 18/28 (64%)
 Frame = +1

Query  1051  LLVPF------------RNK*DG*QIIH  1098
             LLV F            RN      IIH
Sbjct  134   LLVAFVLFLRLRSIRCLRN------IIH  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6288  MHFFIN  6305
             M FF+N
Sbjct  328   MLFFVN  333


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5342  AMSTPNS  5322
             AMS P S
Sbjct  380   AMSIPTS  386


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3447  LVSLLAA  3427
             LV LL A
Sbjct  131   LVALLVA  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2767  FFLMF  2753
             FF MF
Sbjct  203   FFWMF  207


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5478  AMKATL  5461
             A KATL
Sbjct  312   AVKATL  317


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8524  KRRRRW  8541
             KR  RW
Sbjct  362   KRWHRW  367


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 3/17 (17%)
 Frame = -1

Query  1081  HPICS*RVLVVPAMSLP  1031
             H I   R  V  AMS P
Sbjct  371   HSI---RARVARAMSIP  384


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  58   HCLSL  72
            HC SL
Sbjct  127  HCISL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9143  HCLSL  9157
             HC SL
Sbjct  127   HCISL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7097  IRCSSNI  7117
             IRC  NI
Sbjct  147   IRCLRNI  153


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6189  PIVVA  6203
             PI+VA
Sbjct  241   PIIVA  245


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6906  PQLKL  6892
             PQL L
Sbjct  5     PQLRL  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6356  CNTSV  6370
             CN SV
Sbjct  44    CNASV  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3017  EILKE  3031
             EIL E
Sbjct  104   EILNE  108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3213  CTASVN  3196
             C ASV+
Sbjct  44    CNASVD  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 2/20 (10%)
 Frame = -3

Query  7751  IILVHSFLAGFAI-LQLRSV  7695
             I LV   L  F   L LRS+
Sbjct  129   ISLV-ALLVAFVLFLRLRSI  147


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  386  KNSVKAR  406
            K S+ AR
Sbjct  370  KHSIRAR  376


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3798  ALSIP  3784
             A+SIP
Sbjct  380   AMSIP  384


>ref|NP_068352.1|  leukocyte-associated immunoglobulin-like receptor 1 isoform b 
precursor [Homo sapiens]
Length=270

 GENE ID: 3903 LAIR1 | leukocyte-associated immunoglobulin-like receptor 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  4725  PHPRISSE---VHIPLG  4766
             P P IS E   V IPLG
Sbjct  27    PRPSISAEPGTV-IPLG  42


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -3

Query  5123  LLGLVPSILC  5094
             LLGLV   LC
Sbjct  8     LLGLV---LC  14


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2831  LPEKD  2845
             LPEKD
Sbjct  212   LPEKD  216


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  199  PESERET  219
            PE +RET
Sbjct  213  PEKDRET  219


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7550  PGAVDPLG  7527
             PG V PLG
Sbjct  35    PGTVIPLG  42


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = +1

Query  2479  CIYHT*YK  2502
             CIY   YK
Sbjct  101   CIY---YK  105


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1767  APASEG  1750
             APAS+G
Sbjct  136   APASQG  141


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6792  VLFHFALLML  6763
             V F F LL+L
Sbjct  155   VVFLFCLLLL  164


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  588  LYCVHQRIEIK  620
            L+C H   +IK
Sbjct  166  LFCLHRQNQIK  176


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  4477  LERTS-KA  4497
             LERT  KA
Sbjct  200   LERTADKA  207


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6413  WELAQR  6396
             W L QR
Sbjct  240   WALTQR  245


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -2

Query  528  VAVPVFVYSLLM  493
            V V VF + LL+
Sbjct  153  VSV-VFLFCLLL  163


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4109  TIHT  4120
             TIHT
Sbjct  18    TIHT  21


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3044  VYYDPSK  3064
             +YY P K
Sbjct  102   IYYKPPK  108


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  7820  LFIMIVGGLVGLRIVF  7867
             L+I+I     G  +VF
Sbjct  147   LYILI-----GVSVVF  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  9104  WSNQRD  9087
             WS Q D
Sbjct  109   WSEQSD  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  19   WSNQRD  2
            WS Q D
Sbjct  109  WSEQSD  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5985  CVAQT  5971
             C AQT
Sbjct  14    CLAQT  18


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5249  TYGDT  5263
             TY DT
Sbjct  67    TYNDT  71


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 10/22 (45%)
 Frame = +1

Query  6697  PERTRESICYNRKNRKYETSTL  6762
             PE  RE           +TS L
Sbjct  213   PEKDRET----------DTSAL  224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1263  SQEV  1274
             SQEV
Sbjct  229   SQEV  232


>gb|AAA36075.1|  immunoglobulin heavy chain VDJC region [Homo sapiens]
Length=120


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5464  TFYNSNWY  5441
             TFY S WY
Sbjct  45    TFYRSTWY  52


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             W+R+SP
Sbjct  30    WIRQSP  35


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4275  SLTCPI  4258
             SLTC I
Sbjct  11    SLTCAI  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1905  ISSNTVSS  1882
             IS + VSS
Sbjct  16    ISGDSVSS  23


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  3730  ISSNSFVCW  3704
             +SSN F  W
Sbjct  21    VSSNTFA-W  28


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/7 (42%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3384  SNWYHNF  3364
             S WY ++
Sbjct  49    STWYNDY  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6314  IPIDNDT  6334
             I ID DT
Sbjct  63    ISIDPDT  69


 Score = 15.9 bits (30),  Expect(2) = 45019
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2902  LTCPI  2888
             LTC I
Sbjct  12    LTCAI  16


 Score = 15.9 bits (30),  Expect(2) = 45019
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + PS G+E
Sbjct  33    QSPSRGLE  40


>ref|NP_055694.3|  P2Y purinoceptor 14 [Homo sapiens]
 ref|NP_001074924.1|  P2Y purinoceptor 14 [Homo sapiens]
Length=338

 GENE ID: 9934 P2RY14 | purinergic receptor P2Y, G-protein coupled, 14
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 0/14 (0%)
 Frame = +1

Query  6529  SSINSTAVKWQSSR  6570
             SS NST VK  SSR
Sbjct  220   SSRNSTSVKKKSSR  233


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -1

Query  808  TFTHAFKVLGD  776
            TF   FK+LGD
Sbjct  73   TF--PFKILGD  81


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8343  SYSKILS  8323
             SYSK LS
Sbjct  136   SYSKLLS  142


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5391  IYWLHFLL  5368
             I+W  FLL
Sbjct  194   IFWIVFLL  201


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = -1

Query  4564  SSWHYFYV----TIILY  4526
             S W +FYV      I Y
Sbjct  43    SGWIFFYVPSSKSFIIY  59


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7034  VLFCM  7020
             VL+CM
Sbjct  27    VLYCM  31


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2874  NFCMSLT  2854
             +F MSLT
Sbjct  67    DFVMSLT  73


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6764  NISRAKWNNT  6793
             +ISR K  NT
Sbjct  321   DISRIKRGNT  330


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1701  TAPPEES  1721
             T PP+ES
Sbjct  7     TQPPDES  13


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1227  DRFYK  1241
             DR+YK
Sbjct  118   DRYYK  122


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  6238  VFYLSFLHYH  6209
             VF+  F  YH
Sbjct  241   VFFVCFVPYH  250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/21 (33%), Positives = 9/21 (42%), Gaps = 10/21 (47%)
 Frame = -2

Query  6870  PPEDCLKIIVLLFPNCSLNLL  6808
             PP++           CS NLL
Sbjct  9     PPDE----------SCSQNLL  19


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/9 (44%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  444  PILYVLIYI  418
            P+LY +++I
Sbjct  26   PVLYCMVFI  34


 Score = 16.3 bits (31),  Expect(2) = 24725
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4339  FSFKI  4325
             F FKI
Sbjct  74    FPFKI  78


 Score = 15.9 bits (30),  Expect(2) = 24725
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4285  FSLISY  4268
             F LIS+
Sbjct  112   FGLISF  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6158  KCTDLKND  6181
             KC +LK +
Sbjct  171   KCIELKSE  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  6769  NVTMCLSHISYF  6734
             NV  CL  I YF
Sbjct  287   NV--CLDPIIYF  296


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6407  IPIHYC  6424
             IP+ YC
Sbjct  25    IPVLYC  30


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5062  IFFGVI  5045
             +FFG I
Sbjct  110   VFFGLI  115


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  904  VFSMVF  887
            +FS VF
Sbjct  235  IFSIVF  240


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3539  LLVTQ  3525
             LL+TQ
Sbjct  18    LLITQ  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2631  LSINTWM  2651
             LS+  WM
Sbjct  141   LSVIVWM  147


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7632  CSRDLL  7615
             CS +LL
Sbjct  14    CSQNLL  19


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  589  RVATVLY  569
            RV  VL+
Sbjct  95   RVSAVLF  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = -1

Query  5194  SFIL-----KLL*KL*CPFIVWL  5141
             SFI      KLL       IVW+
Sbjct  130   SFIQSVSYSKLL-----SVIVWM  147


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  6264  MLVLIL  6247
             ML L L
Sbjct  147   MLMLLL  152


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8542  VFQSHL  8559
             +F SHL
Sbjct  213   IFKSHL  218


>gb|AAC23982.1|  Jak2 kinase [Homo sapiens]
Length=1132

 GENE ID: 3717 JAK2 | Janus kinase 2 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = +2

Query  6677  TRKRIR------IQ  6700
             TRKRIR      IQ
Sbjct  225   TRKRIRYRFRRFIQ  238


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 15/32 (46%)
 Frame = +1

Query  6223  RRDKKLLFQY----------QHKHKR*GAERI  6288
             RR+ KL  +Y          Q KHK    ERI
Sbjct  922   RRNLKLIMEYLPYGSLRDYLQ-KHK----ERI  948


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -3

Query  8720  VLLIRE----------VALCVVDPQI------KDIL  8661
             +LLIRE          + L   DP I      KDIL
Sbjct  679   ILLIREEDRKTGNPPFIKLS--DPGISITVLPKDIL  712


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2813  SIYQDG  2796
             SIYQ+G
Sbjct  18    SIYQNG  23


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +3

Query  1038  DIAGTTSTLQEQIGWMTNNPP  1100
             DI      LQE I W    PP
Sbjct  710   DI------LQERIPWV---PP  721


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  5843  LMICSATEKLW  5875
             LM  S TE  W
Sbjct  87    LM--SETERIW  95


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4296  VLRCS  4282
             VLRCS
Sbjct  424   VLRCS  428


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7548  WGFGVAL  7568
             W FGV L
Sbjct  1038  WSFGVVL  1044


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7423  LLHYTRQ  7403
             LL+YT Q
Sbjct  953   LLQYTSQ  959


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1465  IMVAEFV  1445
             I+V EFV
Sbjct  623   ILVQEFV  629


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2011  YRYSISR  2031
             YR  ISR
Sbjct  132   YRHGISR  138


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7593  CLGMLV  7610
             CLGM V
Sbjct  178   CLGMAV  183


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5458  YNSNWYKQF  5432
             YNS  YK F
Sbjct  201   YNSISYKTF  209


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7914  YRFR  7925
             YRFR
Sbjct  231   YRFR  234


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3972  VQSSCH  3955
             +QS CH
Sbjct  396   IQSNCH  401


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4851  ILWRL  4837
             ILW L
Sbjct  647   ILWKL  651


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8284  STSSLY  8267
             STSS Y
Sbjct  15    STSSIY  20


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2915  SLGKSD  2898
             SLGKS+
Sbjct  46    SLGKSE  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3827  YCDISHV  3807
             YCD S +
Sbjct  317   YCDFSNI  323


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/37 (29%), Positives = 11/37 (29%), Gaps = 21/37 (56%)
 Frame = +1

Query  8086  RLTLD-----CNEDCGTSGTQGVGSPQILVESPTVLE  8181
             RLT D     C E                V  P VLE
Sbjct  374   RLTADAHHYLCKE----------------VAPPAVLE  394


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  6263  IRGKVQKEY  6289
             IR K+Q +Y
Sbjct  214   IRAKIQ-DY  221


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  544  QDQKNLD  564
            QD KNL+
Sbjct  347  QDGKNLE  353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -1

Query  5104  LSSV----SFVTL  5078
             LSS     SFV L
Sbjct  356   LSSLREALSFVSL  368


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4288  MFSLIS  4271
             MF L S
Sbjct  84    MFALMS  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7630  FQRFI  7616
             F RFI
Sbjct  233   FRRFI  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6443  ILKCNNKTFN  6472
             +L C  K FN
Sbjct  424   VLRCSPKDFN  433


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7920  NDNGEY  7903
             N+N EY
Sbjct  457   NENEEY  462


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5080  LGKGGF  5063
             LGKG F
Sbjct  855   LGKGNF  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8968  ELATRD  8985
             +LATR+
Sbjct  976   DLATRN  981


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 0/18 (0%)
 Frame = +3

Query  1338  KALGPAATLEEMMTACQG  1391
             K   P A LE     C+G
Sbjct  385   KEVAPPAVLENIQSNCHG  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  4863  SFSSILW  4843
             SF   LW
Sbjct  738   SFGTTLW  744


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4559  RRKAKIIRDY  4588
             RR  K I +Y
Sbjct  922   RRNLKLIMEY  931


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2201  EICTEME  2221
             +IC  ME
Sbjct  959   QICKGME  965


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9001  KSPAESP  8981
             K P ESP
Sbjct  1011  KEPGESP  1017


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1875  QEQMI  1889
             Q QMI
Sbjct  1070  QGQMI  1074


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1686  SEENSLAFP  1660
             SE + L FP
Sbjct  50    SEADYLTFP  58


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4984  VNIKQ  4998
             V IKQ
Sbjct  326   VSIKQ  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8152  ILVE  8163
             ILVE
Sbjct  982   ILVE  985


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2537  VLPQ  2548
             VLPQ
Sbjct  1000  VLPQ  1003


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  8096  LIVTRIVELL---GR  8131
             +IV   +ELL   GR
Sbjct  1073  MIVFHLIELLKNNGR  1087


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  846  MFSALSE  866
            MF  +SE
Sbjct  84   MFALMSE  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1637  REDLAF  1654
             RE L F
Sbjct  360   REALSF  365


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8456  FQVSRCC  8436
             FQ   CC
Sbjct  493   FQFTKCC  499


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3100  PMDISNL  3120
             P D SNL
Sbjct  503   PKDKSNL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1192  DKDQRN  1209
             DK +RN
Sbjct  584   DKAHRN  589


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6607  VREIDR  6590
             +RE DR
Sbjct  682   IREEDR  687


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3353  PPLVKL  3370
             PP +KL
Sbjct  692   PPFIKL  697


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9092  RDPVQ  9078
             RDP Q
Sbjct  839   RDPTQ  843


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6619  HNSTAEH  6639
             + ST EH
Sbjct  885   QHSTEEH  891


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3168  LILAYFP  3148
             LI+ Y P
Sbjct  927   LIMEYLP  933


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1299  LVQNAN  1316
             LV+N N
Sbjct  983   LVENEN  988


>gb|AAK29630.1|  chemokine receptor CXCR4 [Homo sapiens]
Length=352

 GENE ID: 7852 CXCR4 | chemokine (C-X-C motif) receptor 4 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6847  YCFIISK  6827
             YC IISK
Sbjct  219   YCIIISK  225


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  584  CYCII  570
            CYCII
Sbjct  218  CYCII  222


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  5031  PSIVEILPCY  5002
             P IV IL CY
Sbjct  211   PGIV-ILSCY  219


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 4/13 (30%)
 Frame = -1

Query  4225  YS---LTLGIVGN  4196
             YS   LT GIVGN
Sbjct  45    YSIIFLT-GIVGN  56


 Score = 18.5 bits (36),  Expect(2) =  2530
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6244  FQYQH  6258
             FQ+QH
Sbjct  199   FQFQH  203


 Score = 18.5 bits (36),  Expect(2) =  2530
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  6324  IM---ILPAI  6344
             IM   ILP I
Sbjct  204   IMVGLILPGI  213


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5911  FLPHRYPII  5885
             FLP  Y II
Sbjct  40    FLPTIYSII  48


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4676  CFRE  4687
             CFRE
Sbjct  28    CFRE  31


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  8459  FFQVSRCCSHPI  8424
             FF+   CC  PI
Sbjct  292   FFH---CCLNPI  300


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8753  DLWMV  8767
             DLW V
Sbjct  193   DLWVV  197


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3846  VILTC  3860
             VIL C
Sbjct  214   VILSC  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6628  YYYGFSI  6608
             YY G SI
Sbjct  255   YYIGISI  261


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  5096  CQFRNTRQRW  5067
             C+F NT + W
Sbjct  274   CEFENTVHKW  283


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2754  FLSGVV  2737
             FL G+V
Sbjct  49    FLTGIV  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8825  VLSFIGL  8805
             +L FI L
Sbjct  126   ILAFISL  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7029  ILHGRVIVS  7003
             IL G VI S
Sbjct  209   ILPGIVILS  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8196  IVLLAC  8213
             IV L C
Sbjct  213   IVILSC  218


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F CW P
Sbjct  249   FACWLP  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2205  ISTNAFI  2185
             IS + FI
Sbjct  259   ISIDSFI  265


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6800  VLKCYSI  6780
             +L CY I
Sbjct  215   ILSCYCI  221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7474  HSLGHQ  7491
             HS GHQ
Sbjct  228   HSKGHQ  233


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7057  FLPHVY  7040
             FLP +Y
Sbjct  40    FLPTIY  45


>gb|AAZ32314.1|  immunoglobulin kappa light chain [Homo sapiens]
Length=117


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8795  IWLNWY  8778
             IWL WY
Sbjct  31    IWLAWY  36


 Score = 19.7 bits (39),  Expect(2) =  2057
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +2

Query  7010  ITLPCRIKQIINMW  7051
             IT  CR  Q +N W
Sbjct  21    IT--CRANQSVNIW  32


 Score = 18.0 bits (35),  Expect(2) =  2057
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +3

Query  756  QMVHQAISPRTLNA  797
            QM +   SP TL A
Sbjct  3    QMTQ---SPSTLSA  13


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2886  NFPTNFC  2866
             +F T FC
Sbjct  82    DFATYFC  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  508  LQPSD  494
            LQP D
Sbjct  78   LQPGD  82


>gb|AAY33464.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             ISS   EDL
Sbjct  75    ISSLQPEDL  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5877  SQSIMGYL  5900
             SQ I  YL
Sbjct  26    SQGISSYL  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8480  QYSSY  8494
             QY SY
Sbjct  90    QYDSY  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = -2

Query  4065  VSCPVSAGITSASIYPLA  4012
             + C  S GI S   Y LA
Sbjct  21    ITCRASQGISS---Y-LA  34


>gb|AAY33449.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5877  SQSIMGYL  5900
             SQ I  YL
Sbjct  26    SQGISSYL  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = -2

Query  4065  VSCPVSAGITSASIYPLA  4012
             + C  S GI S   Y LA
Sbjct  21    ITCRASQGISS---Y-LA  34


>gb|AAY33461.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4065  VSCPVSAGITSA  4030
             + C  S GI SA
Sbjct  21    ITCRASQGISSA  32


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>gb|AAY33352.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 9/25 (36%)
 Frame = -2

Query  2886  NFPTNFCMSLTVQ-----LSFSGST  2827
             +F T FC+    Q     L F G T
Sbjct  82    DFATYFCL----QHHDYPLTFGGGT  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  74    TISSLQPEDFATYFCL  89


>gb|AAY33339.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8480  QYSSY  8494
             QY SY
Sbjct  90    QYNSY  94


>gb|AAS59837.1|  T-cell immune regulator 1 transcript variant 7 [Homo sapiens]
Length=95

 GENE ID: 10312 TCIRG1 | T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  5266  PSIPISFIDM  5237
             PSI I FI+M
Sbjct  24    PSILIHFINM  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -3

Query  5108  PSILCQFRNTRQRWLYLF  5055
             PSIL +F N     ++LF
Sbjct  24    PSILIHFIN-----MFLF  36


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8670  GYLVF  8656
             GYLVF
Sbjct  2     GYLVF  6


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  438  VWASR  452
            VWA R
Sbjct  15   VWAAR  19


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2342  RTQDFWEVQ  2368
             R Q  WE Q
Sbjct  67    RSQGHWELQ  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  1798  PSGHSLATTPR  1830
             P  H L  TPR
Sbjct  57    PGSHGLMGTPR  67


>ref|NP_932065.1|  dipeptidyl peptidase 8 isoform 4 [Homo sapiens]
Length=847

 GENE ID: 54878 DPP8 | dipeptidyl-peptidase 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 11/25 (44%)
 Frame = +2

Query  4370  RIVDIIATDIQTKELQKQITKIQNF  4444
             RI+D+I  D   KEL      IQ F
Sbjct  355   RIIDVI--D---KEL------IQPF  368


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 11/25 (44%)
 Frame = -2

Query  4800  DPNMLLLPI*HPLVGCVLLNLFLDE  4726
             +PN LLL     L G      FLDE
Sbjct  770   EPNRLLL-----LHG------FLDE  783


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 17/28 (60%)
 Frame = -1

Query  2539  HIVLISNPWCLIVYTRYGKCSILPEVFI  2456
             +IVLIS                 PE FI
Sbjct  403   QIVLIS-----------------PELFI  413


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1769  RLLLLRG  1749
             RLLLL G
Sbjct  773   RLLLLHG  779


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 23/43 (53%)
 Frame = +3

Query  4599  WQVM------IVWQVDRMRIRTWKSLV-----K-----HHMYV  4679
             W+V+      I  QVD  R R    LV     K     HH+YV
Sbjct  519   WEVLGRHGSNI--QVDEVR-R----LVYFEGTKDSPLEHHLYV  554


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3190  KTINR  3204
             KTINR
Sbjct  120   KTINR  124


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6919  EKFPS  6905
             EKFPS
Sbjct  765   EKFPS  769


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
 Frame = +1

Query  5323  ELGVDI---AE*ALLDRGEQEMEPVD-PRLEP  5406
             +LGV+I   A+       E+  E  D P LEP
Sbjct  25    QLGVEIFETAD------CEENIESQDRPKLEP  50


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1694  WSALKK  1677
             WS LKK
Sbjct  58    WSQLKK  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3358  LSEIMV  3375
             +SEIM+
Sbjct  345   MSEIMI  350


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 14/28 (50%)
 Frame = -2

Query  2244  IFEIFPSFSISVQ-----ISTNAFIFSS  2176
             IF +FP      Q     I    FIF S
Sbjct  452   IFHVFP------QSHEEEI---EFIFAS  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  1394  YSLTCC--HH--FF  1365
             YS  CC  +H  FF
Sbjct  571   YSHSCCISQHCDFF  584


 Score = 17.2 bits (33),  Expect(2) = 11968
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4705  IDITMKALIQ  4734
             ID+  K LIQ
Sbjct  357   IDVIDKELIQ  366


 Score = 15.9 bits (30),  Expect(2) = 11968
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4737  ISSEVHIPLGD  4769
             IS E  IP  D
Sbjct  407   ISPELFIPVED  417


 Score = 18.0 bits (35),  Expect(2) = 11970
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  5348  YSAMSTPNSEN  5316
             Y AMS  N EN
Sbjct  101   YLAMSGENREN  111


 Score = 15.1 bits (28),  Expect(2) = 11970
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIY L
Sbjct  98    RIYYL  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5740  RLIERAEDS  5766
             RLIE   DS
Sbjct  424   RLIESVPDS  432


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2299  TVFFLYG  2279
             TV F YG
Sbjct  664   TVLFIYG  670


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3242  ILLCFL  3225
             ILL FL
Sbjct  792   ILLSFL  797


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7154  NNESEI  7171
             N+ESE+
Sbjct  306   NDESEV  311


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  1972  LSYFDKTSNSP  1940
             L YF+ T +SP
Sbjct  537   LVYFEGTKDSP  547


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  5082  VTKLTEDR  5105
             VT LT DR
Sbjct  563   VTRLT-DR  569


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 6/19 (31%)
 Frame = +2

Query  6545  LLLNGSLAEEEVVIRSVNF  6601
             LLL G L E       V F
Sbjct  775   LLLHGFLDE------NVHF  787


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2587  HATLEY  2570
             +ATL+Y
Sbjct  140   QATLDY  145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1196  LSYVQN  1179
             L YV+N
Sbjct  249   LTYVHN  254


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2894  PNSISPL  2874
             P+S+ PL
Sbjct  430   PDSVTPL  436


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7220  YKYKVVKI  7243
             +KYK V I
Sbjct  718   FKYKMVAI  725


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3620  QPDQSE  3637
             +PDQ E
Sbjct  747   HPDQNE  752


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3407  ETFYVD  3424
             E FYV+
Sbjct  49    EPFYVE  54


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7036  LFYS  7025
             LFYS
Sbjct  113   LFYS  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5540  DEELIR  5557
             +EEL R
Sbjct  151   EEELLR  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6498  LTFVH  6484
             LT+VH
Sbjct  249   LTYVH  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7641  ITRPGW  7658
             I R GW
Sbjct  378   IARAGW  383


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6747  IFPIFP  6730
             IF +FP
Sbjct  452   IFHVFP  457


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  3722  GGNEQVD---KLV  3751
             G N QVD    LV
Sbjct  526   GSNIQVDEVRRLV  538


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6140  PLCVSL  6157
             P CVSL
Sbjct  594   PHCVSL  599


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8112  LWNFWDAG  8135
             LW F D G
Sbjct  732   LWIFYDTG  739


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5707  LRQRK  5721
             LR+RK
Sbjct  155   LRERK  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  477  PGLLETS  497
            P L ETS
Sbjct  204  PNLVETS  210


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2004  CPQISM  1987
             CP I M
Sbjct  211   CPNIRM  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -3

Query  6851  RLLFYYFQIVL  6819
             RL     QIVL
Sbjct  401   RL-----QIVL  406


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8117  ELLGRRG  8137
             E LGR G
Sbjct  520   EVLGRHG  526


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1580  FPTALF  1563
             +PT LF
Sbjct  662   YPTVLF  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3737  LVHFLQ  3720
             L H+LQ
Sbjct  829   LLHYLQ  834


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8391  RERMR  8405
             RER R
Sbjct  156   RERKR  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  144  GISSY  130
            GI SY
Sbjct  165  GIASY  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+++D
Sbjct  413   IPVEDD  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3044  VYYDPSKD  3067
             VY++  KD
Sbjct  538   VYFEGTKD  545


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1827  RGRCQR  1810
             RG C+R
Sbjct  705   RGSCHR  710


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7140  MVVIA  7154
             MV IA
Sbjct  722   MVAIA  726


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  3760  NQESTIF  3780
             N E T F
Sbjct  108   NRENTLF  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  4502  RGALLVLS  4479
             R A L LS
Sbjct  124   RAAVLMLS  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5254  WGYLGRSGS  5280
             W  LGR GS
Sbjct  519   WEVLGRHGS  527


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6640  CVQLY  6626
             CV LY
Sbjct  596   CVSLY  600


>ref|NP_620385.1|  cell surface glycoprotein CD200 receptor 1 isoform b [Homo sapiens]
Length=188

 GENE ID: 131450 CD200R1 | CD200 receptor 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 15/33 (45%)
 Frame = -1

Query  5008  LLCP---A*YSHLGL----TMCPNKAFLIAESE  4931
             +LCP   A    LGL    T      FL+AE E
Sbjct  1     MLCPWRTA---NLGLLLILTI-----FLVAEAE  25


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7458  CCASIALSKL  7429
             CC  IAL  L
Sbjct  83    CCPPIALRNL  92


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 3/16 (18%)
 Frame = +2

Query  4820  LAFGSGSLHRMEEKEI  4867
             LA  S SL  M+EK+I
Sbjct  45    LA--SSSLC-MDEKQI  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +2

Query  4415  QKQITKIQNF  4444
             +KQIT  QN+
Sbjct  54    EKQIT--QNY  61


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5569  ESDCSDE  5549
             E +C DE
Sbjct  120   ETNCTDE  126


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  5813  WRWGTMLLGMLMI  5851
             WR  T  LG+L+I
Sbjct  5     WR--TANLGLLLI  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2570  LLVILSI  2550
             LL IL I
Sbjct  12    LLLILTI  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2565  QQYSKV  2582
             Q YSKV
Sbjct  59    QNYSKV  64


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8090  LLLIVT  8107
             LLLI T
Sbjct  12    LLLILT  17


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  1975  ILSYFDKTS  1949
             IL YF  TS
Sbjct  179   ILRYF--TS  185


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8340  YSKIL  8326
             YSK+L
Sbjct  61    YSKVL  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 17/39 (43%)
 Frame = +3

Query  381  WEKIRLR--PGGKKKYKLK-------------HIVWASR  452
            WE I LR  P   K YK K              I W SR
Sbjct  97   WE-IILRGQPSCTKAYK-KETNETKETNCTDERITWVSR  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6693  VSREDQ  6710
             VSR DQ
Sbjct  131   VSRPDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -1

Query  4642  LILILSTCHTI  4610
             L LIL    TI
Sbjct  12    LLLIL----TI  18


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2065  QISSNY  2048
             QI  NY
Sbjct  56    QITQNY  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7712  LQLRSV  7695
             LQ R V
Sbjct  140   LQIRTV  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  769  RPYHLE  786
            R YHL+
Sbjct  166  RGYHLQ  171


>ref|NP_411241.1|  cyclin-D1-binding protein 1 isoform 2 [Homo sapiens]
Length=232

 GENE ID: 23582 CCNDBP1 | cyclin D-type binding-protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -3

Query  4496  ALLVLSK-VDF  4467
             ALL L K VDF
Sbjct  45    ALLMLTKNVDF  55


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  7581  QMSFPEQPQIPR  7546
             QM     PQIPR
Sbjct  33    QM-----PQIPR  39


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  61   CLSL---NKACL  87
            CL L    KACL
Sbjct  116  CLALVRASKACL  127


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  9146  CLSL---NKACL  9172
             CL L    KACL
Sbjct  116   CLALVRASKACL  127


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6777  ALLML  6763
             ALLML
Sbjct  45    ALLML  49


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  175  LAVAPEQGPE  204
            L V P Q PE
Sbjct  8    LSVTPTQSPE  17


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  1195  CLMS-RMLV  1172
             CL   RMLV
Sbjct  126   CLKKIRMLV  134


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6996  KEVTQS  7013
             KE TQS
Sbjct  223   KELTQS  228


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7902  PCLTL  7888
             PCL L
Sbjct  115   PCLAL  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8276  ACRAIRHIPR  8305
             AC    +IPR
Sbjct  30    ACQQMPQIPR  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1908  LISSNTV  1888
             LIS N V
Sbjct  21    LISYNSV  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6176  NDTNTNSS  6199
             NDT  N S
Sbjct  78    NDTEENNS  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7569  ENSFAPLL  7592
             E+S  PLL
Sbjct  204   EDSWIPLL  211


>ref|NP_057595.2|  C-type lectin domain family 1 member A [Homo sapiens]
Length=280

 GENE ID: 51267 CLEC1A | C-type lectin domain family 1, member A [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  9081  YWVSLVRPD  9107
             YW  L RPD
Sbjct  196   YWTGLLRPD  204


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8726  CVVLLI  8709
             C VLLI
Sbjct  58    CLVLLI  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6911  EFFY  6922
             EFFY
Sbjct  191   EFFY  194


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  7590  LCLGMLVG  7613
             LCL +L+G
Sbjct  57    LCLVLLIG  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  7143  VVIATMSPRSSD  7178
             ++I   SPRS D
Sbjct  224   IIIDVTSPRSRD  235


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6357  VTPQSLH  6377
             V P+SLH
Sbjct  264   VKPESLH  270


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2322  ISENLIREL  2348
             + E L REL
Sbjct  117   VAEKLCREL  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  986  WMHSIPF  966
            WM   PF
Sbjct  211  WMDGTPF  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  4820  LAFGSGSLHRMEEK  4861
             LA   GSL+   EK
Sbjct  110   LA---GSLQHVAEK  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5323  LKMDKQQ  5303
             LK +KQ+
Sbjct  173   LKINKQE  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
 Frame = -1

Query  5857  TTDHQHPK--EHGAPS  5816
             TT H  P   EH APS
Sbjct  29    TTRHPEPRRTEHRAPS  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1640  EDLAF  1654
             EDL F
Sbjct  179   EDLEF  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7033  FYSAW  7019
             FYS W
Sbjct  193   FYSYW  197


>ref|NP_922945.1|  C-type lectin domain family 7 member A isoform f [Homo sapiens]
Length=77

 GENE ID: 64581 CLEC7A | C-type lectin domain family 7, member A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query  2576  GIL-LVILSIPV  2544
             GIL LVIL I V
Sbjct  51    GILCLVILVIAV  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             +SQSNT
Sbjct  21    DSQSNT  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  3646  SQSNNR-AV  3669
             SQSN R AV
Sbjct  22    SQSNTRIAV  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9017  ATPPW  9003
             A PPW
Sbjct  39    ASPPW  43


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7590  LCLGMLV  7610
             LCL  LV
Sbjct  53    LCLVILV  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  787  VLGDMA  770
            VLG MA
Sbjct  63   VLGTMA  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5581  EKLDE  5567
             E LDE
Sbjct  8     ENLDE  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/23 (30%), Positives = 8/23 (34%), Gaps = 10/23 (43%)
 Frame = -3

Query  8732  PW----------CVVLLIREVAL  8694
             PW          C V L+  V L
Sbjct  42    PWRLIAVILGILCLVILVIAVVL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             LI +IL
Sbjct  45    LIAVIL  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7143  VVIATM  7160
             VV  TM
Sbjct  62    VVLGTM  67


>ref|NP_001136122.1|  heterogeneous nuclear ribonucleoprotein L-like isoform 2 [Homo 
sapiens]
Length=537

 GENE ID: 92906 HNRPLL | heterogeneous nuclear ribonucleoprotein L-like
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = +1

Query  5794  ALVEMG----VE  5817
             ALVEMG    VE
Sbjct  370   ALVEMGDEYAVE  381


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1235  EPVYI  1221
             EPVYI
Sbjct  129   EPVYI  133


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 9/22 (40%)
 Frame = +2

Query  608  DRDK---R------HQGSFRQD  646
            DR K   R      H  SFR+D
Sbjct  263  DRGKGRQRQAILGEHPSSFRHD  284


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  2438  YFSVPL---DEDFRK  2473
             Y+ VPL   +E F K
Sbjct  453   YYNVPLCVTEETFTK  467


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1471  REAILG  1488
             R+AILG
Sbjct  270   RQAILG  275


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7596  GTAVVQM  7576
             GTA V+M
Sbjct  368   GTALVEM  374


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2617  LFSKRL  2600
             LF KRL
Sbjct  392   LFGKRL  397


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7801  ICYV  7790
             ICYV
Sbjct  97    ICYV  100


 Score = 16.8 bits (32),  Expect(2) = 17149
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6140  PLCV  6151
             PLCV
Sbjct  457   PLCV  460


 Score = 15.9 bits (30),  Expect(2) = 17149
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6044  NFNMWKND  6067
             +F M KN+
Sbjct  424   DFAMSKNN  431


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6305  LDIIPIDND  6331
             L++I  DND
Sbjct  242   LNVIRNDND  250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  638  RQDRGRAKQ  664
            R DRG   Q
Sbjct  261  RRDRGKGRQ  269


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7045  VYNLF  7031
             V+NLF
Sbjct  347   VFNLF  351


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1429  SAKTL  1415
             SAKTL
Sbjct  488   SAKTL  492


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5200  SNSFILKL  5177
             SN + LKL
Sbjct  522   SNPYTLKL  529


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5808  GGGDG  5822
             GGGDG
Sbjct  44    GGGDG  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3427  PIYIEG  3410
             P+YI G
Sbjct  130   PVYIAG  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  1761  QEPIDKELYPLT  1796
             Q P    LYP T
Sbjct  169   QNP----LYPIT  176


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  872  HPTRFKH  892
            HP  F H
Sbjct  277  HPSSFRH  283


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5885  YYGVP  5899
             YY VP
Sbjct  453   YYNVP  457


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8015  LIEWIC  7998
             L EW C
Sbjct  495   LLEWEC  500


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4573  LCFS  4562
             LCFS
Sbjct  529   LCFS  532


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5354  YSTEE  5368
             YS EE
Sbjct  29    YSAEE  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3128  ALDKF  3114
             AL+KF
Sbjct  90    ALEKF  94


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 11/21 (52%)
 Frame = +1

Query  1573  VGNVERKDTK*KIVLRDRLIF  1635
             VG V+R      IV     IF
Sbjct  187   VGKVQR------IV-----IF  196


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3474  LVTYP  3460
             LV YP
Sbjct  309   LVAYP  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7687  CVIVNFSVPL  7658
             CV   + VPL
Sbjct  449   CVLHYYNVPL  458


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8612  FKRKG  8626
             FKR G
Sbjct  196   FKRNG  200


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8702  VALCV  8688
             V LCV
Sbjct  456   VPLCV  460


>ref|NP_006044.1|  V-type proton ATPase 116 kDa subunit a isoform 3 isoform b [Homo 
sapiens]
 gb|AAC35742.1|  TIRC7 [Homo sapiens]
 gb|EAW74689.1|  T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal 
V0 subunit A3, isoform CRA_a [Homo sapiens]
Length=614

 GENE ID: 10312 TCIRG1 | T-cell, immune regulator 1, ATPase, H+ transporting,
lysosomal V0 subunit A3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  5266  PSIPISFIDM  5237
             PSI I FI+M
Sbjct  388   PSILIHFINM  397


 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5467  CFHCQV  5484
             CFHC+V
Sbjct  22    CFHCHV  27


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1494  RKIVKCFNC  1520
             RKI  CF C
Sbjct  17    RKITDCFHC  25


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  501  LLMFL  487
            LLMFL
Sbjct  195  LLMFL  199


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 5/18 (27%)
 Frame = -3

Query  5108  PSILCQFRNTRQRWLYLF  5055
             PSIL +F N     ++LF
Sbjct  388   PSILIHFIN-----MFLF  400


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 6/22 (27%)
 Frame = +1

Query  8017  ERILGTYLGRSAEPVPLQ-LPP  8079
             ER L   LGR    V LQ LPP
Sbjct  59    ERFLSQVLGR----V-LQLLPP  75


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8670  GYLVF  8656
             GYLVF
Sbjct  366   GYLVF  370


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 8/19 (42%)
 Frame = -3

Query  6029  PILLLVGWG----LWVHRH  5985
             PILLL   G    L  HRH
Sbjct  429   PILLL---GTPLHL-LHRH  443


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3536  AIYLAL  3553
             A+YLAL
Sbjct  85    AVYLAL  90


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1739  LYPRPE  1722
             LYPR E
Sbjct  409   LYPRQE  414


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4028  EAEVIPAE  4051
             EAE +P E
Sbjct  488   EAELVPSE  495


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -1

Query  8464  PCFSRSRDAAPTL  8426
             PC    RD  PTL
Sbjct  137   PC----RDMPPTL  145


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3989  VILVAVHVA  4015
             VIL  VH A
Sbjct  323   VILGVVHMA  331


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 35/62 (56%)
 Frame = +3

Query  5145  HTMNGH*SF*RSLRMKL-LD-----IFLG---FG-----SMA*GN-IS------MKLMGI  5261
             HTM             L LD     +FLG   FG     S+A  N  S      MK+  I
Sbjct  279   HTM-------------LTLDPNVTGVFLGPYPFGIDPIWSLA-ANHLSFLNSFKMKMSVI  324

Query  5262  LG  5267
             LG
Sbjct  325   LG  326


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7587  VVQMSF  7570
             VV+M F
Sbjct  327   VVHMAF  332


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2530  LISNPWC  2510
             LI   WC
Sbjct  102   LIAEAWC  108


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5872  VGHSLL  5889
             VGH LL
Sbjct  191   VGHGLL  196


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3809  VHLGPYLF  3786
             V LGPY F
Sbjct  291   VFLGPYPF  298


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3258  LGVFPHI  3238
             LGVF H+
Sbjct  336   LGVFNHV  342


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  438  VWASR  452
            VWA R
Sbjct  379  VWAAR  383


 Score = 16.8 bits (32),  Expect(2) = 23430
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = -1

Query  3814  LMFILGL--------IY  3788
             L F LGL        IY
Sbjct  358   LTFLLGLFGYLVFLVIY  374


 Score = 15.1 bits (28),  Expect(2) = 23430
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  3745  FIYLFISSNS  3716
             FI +F  S S
Sbjct  394   FINMFLFSHS  403


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8461  CFSR  8450
             CFSR
Sbjct  248   CFSR  251


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4398  MSVAIM  4381
             M VAI+
Sbjct  567   MTVAIL  572


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4030  FYISTGY  4010
             FY  TGY
Sbjct  596   FYSGTGY  602


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4516  PFTF  4505
             PFTF
Sbjct  606   PFTF  609


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  1480  ILGTKERLLS  1509
             +LG  ER LS
Sbjct  54    VLGETERFLS  63


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7842  PPTIIMNN  7819
             PPT I  N
Sbjct  142   PPTLIRTN  149


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  216  FPFAFRSLFG  187
            FPF F  +FG
Sbjct  180  FPFLFAVMFG  189


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6627  TIMVLAL  6607
             T  VLAL
Sbjct  419   TLVVLAL  425


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7350  EALWA  7364
             E LWA
Sbjct  533   EVLWA  537


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6789  LFHFALLM  6766
             +F FAL M
Sbjct  197   MFLFALAM  204


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8643  LALPVPPFLL  8614
             LAL   P LL
Sbjct  423   LALAMVPILL  432


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  980  HSIPFC  963
            H I FC
Sbjct  503  HTIEFC  508


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4619  ASRQDED  4639
             A RQ+E+
Sbjct  452   ADRQEEN  458


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  951  NEEAAE  968
            +EE AE
Sbjct  485  DEEEAE  490


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  2573  ILLVI--LS  2553
             ILLV   LS
Sbjct  571   ILLVMEGLS  579


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5220  SQILG  5206
             SQ+LG
Sbjct  63    SQVLG  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8886  LTLLSPGH  8863
             L LL PG+
Sbjct  70    LQLLPPGQ  77


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5915  LLPSTQV  5895
             LLP  QV
Sbjct  72    LLPPGQV  78


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3181  SVGTPHSC  3158
             SV T H C
Sbjct  94    SVSTTHKC  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4383  MSTIL  4369
             MS IL
Sbjct  321   MSVIL  325


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3029  LLESL  3015
             LLE L
Sbjct  351   LLETL  355


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8640  LIHSQRR  8660
             L H +RR
Sbjct  439   LLHRHRR  445


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  1875  VSNRASF  1855
             VSN AS+
Sbjct  512   VSNTASY  518


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6335  TSYKL  6349
             T YKL
Sbjct  600   TGYKL  604


>ref|NP_573399.1|  osteoclast-associated immunoglobulin-like receptor isoform 4 
[Homo sapiens]
Length=263

 GENE ID: 126014 OSCAR | osteoclast associated, immunoglobulin-like receptor
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 36/61 (59%)
 Frame = -3

Query  1775  VYRLLLLRGSCCLYPRPEALFWWGCW---LWS------------ALKKIPWPSLVGRPDL  1641
             +YR       CC Y RP+       W    WS             L   P PSLV    L
Sbjct  97    IYR-------CC-YRRPD-------WGPGVWSQPSDVLELLVTEEL---PRPSLVA---L  135

Query  1640  P  1638
             P
Sbjct  136   P  136


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  6264  M-LVLIL  6247
             M LVLIL
Sbjct  1     MALVLIL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  8    LVRPDL------SLGAL  40
            LVR  L      SLGAL
Sbjct  230  LVRLGLAGLVLISLGAL  246


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +3

Query  9093  LVRPDL------SLGAL  9125
             LVR  L      SLGAL
Sbjct  230   LVRLGLAGLVLISLGAL  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1346  GTSGYTR  1366
             G S YTR
Sbjct  221   GSSDYTR  227


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5129  LGLLGLV  5109
             LGL GLV
Sbjct  233   LGLAGLV  239


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1548  CRAP  1559
             CRAP
Sbjct  53    CRAP  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = -2

Query  3483  LPLLVTYPAF-----PNLVSL  3436
             L LLVT         P LV L
Sbjct  119   LELLVT----EELPRPSLVAL  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  365  GRIRSM  382
            GR R M
Sbjct  152  GRLRNM  157


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  942  LLTFAW  925
            L TF W
Sbjct  246  LVTFDW  251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2417  LLLIFSFLTL  2388
             L LI   LTL
Sbjct  3     LVLILQLLTL  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7010  ITLPCR  7027
             +TL CR
Sbjct  49    VTLRCR  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8717  LLIREV  8700
             LL R+V
Sbjct  73    LLFRDV  78


>ref|NP_570127.2|  osteoclast-associated immunoglobulin-like receptor isoform 3 
[Homo sapiens]
Length=267

 GENE ID: 126014 OSCAR | osteoclast associated, immunoglobulin-like receptor
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 36/61 (59%)
 Frame = -3

Query  1775  VYRLLLLRGSCCLYPRPEALFWWGCW---LWS------------ALKKIPWPSLVGRPDL  1641
             +YR       CC Y RP+       W    WS             L   P PSLV    L
Sbjct  101   IYR-------CC-YRRPD-------WGPGVWSQPSDVLELLVTEEL---PRPSLVA---L  139

Query  1640  P  1638
             P
Sbjct  140   P  140


 Score = 21.8 bits (44),  Expect =   981
 Identities = 18/48 (37%), Positives = 19/48 (39%), Gaps = 20/48 (41%)
 Frame = -2

Query  4395  SVAIMSTILSPALYPPIPPFLLKLWMNT--AICTAV-------LRCSA  4279
             SVAI   I  PA Y P P      W+    A  T V       LRC A
Sbjct  23    SVAI---IVPPASYHPKP------WLGAQPA--TVVTPGVNVTLRCRA  59


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  6264  M-LVLIL  6247
             M LVLIL
Sbjct  1     MALVLIL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  8    LVRPDL------SLGAL  40
            LVR  L      SLGAL
Sbjct  234  LVRLGLAGLVLISLGAL  250


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +3

Query  9093  LVRPDL------SLGAL  9125
             LVR  L      SLGAL
Sbjct  234   LVRLGLAGLVLISLGAL  250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1346  GTSGYTR  1366
             G S YTR
Sbjct  225   GSSDYTR  231


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5129  LGLLGLV  5109
             LGL GLV
Sbjct  237   LGLAGLV  243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1548  CRAP  1559
             CRAP
Sbjct  57    CRAP  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = -2

Query  3483  LPLLVTYPAF-----PNLVSL  3436
             L LLVT         P LV L
Sbjct  123   LELLVT----EELPRPSLVAL  139


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  365  GRIRSM  382
            GR R M
Sbjct  156  GRLRNM  161


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  942  LLTFAW  925
            L TF W
Sbjct  250  LVTFDW  255


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2417  LLLIFSFLTL  2388
             L LI   LTL
Sbjct  3     LVLILQLLTL  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7010  ITLPCR  7027
             +TL CR
Sbjct  53    VTLRCR  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8717  LLIREV  8700
             LL R+V
Sbjct  77    LLFRDV  82


>ref|NP_573398.1|  osteoclast-associated immunoglobulin-like receptor isoform 5 
[Homo sapiens]
Length=252

 GENE ID: 126014 OSCAR | osteoclast associated, immunoglobulin-like receptor
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 18/61 (29%), Positives = 20/61 (32%), Gaps = 36/61 (59%)
 Frame = -3

Query  1775  VYRLLLLRGSCCLYPRPEALFWWGCW---LWS------------ALKKIPWPSLVGRPDL  1641
             +YR       CC Y RP+       W    WS             L   P PSLV    L
Sbjct  86    IYR-------CC-YRRPD-------WGPGVWSQPSDVLELLVTEEL---PRPSLVA---L  124

Query  1640  P  1638
             P
Sbjct  125   P  125


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  6264  M-LVLIL  6247
             M LVLIL
Sbjct  1     MALVLIL  7


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +2

Query  8    LVRPDL------SLGAL  40
            LVR  L      SLGAL
Sbjct  219  LVRLGLAGLVLISLGAL  235


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = +3

Query  9093  LVRPDL------SLGAL  9125
             LVR  L      SLGAL
Sbjct  219   LVRLGLAGLVLISLGAL  235


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1346  GTSGYTR  1366
             G S YTR
Sbjct  210   GSSDYTR  216


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5129  LGLLGLV  5109
             LGL GLV
Sbjct  222   LGLAGLV  228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1548  CRAP  1559
             CRAP
Sbjct  42    CRAP  45


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = -2

Query  3483  LPLLVTYPAF-----PNLVSL  3436
             L LLVT         P LV L
Sbjct  108   LELLVT----EELPRPSLVAL  124


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  365  GRIRSM  382
            GR R M
Sbjct  141  GRLRNM  146


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  942  LLTFAW  925
            L TF W
Sbjct  235  LVTFDW  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2417  LLLIFSFLTL  2388
             L LI   LTL
Sbjct  3     LVLILQLLTL  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7010  ITLPCR  7027
             +TL CR
Sbjct  38    VTLRCR  43


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8717  LLIREV  8700
             LL R+V
Sbjct  62    LLFRDV  67


>ref|NP_569118.1|  dipeptidyl peptidase 8 isoform 1 [Homo sapiens]
Length=882

 GENE ID: 54878 DPP8 | dipeptidyl-peptidase 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 11/25 (44%)
 Frame = +2

Query  4370  RIVDIIATDIQTKELQKQITKIQNF  4444
             RI+D+I  D   KEL      IQ F
Sbjct  339   RIIDVI--D---KEL------IQPF  352


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 11/25 (44%)
 Frame = -2

Query  4800  DPNMLLLPI*HPLVGCVLLNLFLDE  4726
             +PN LLL     L G      FLDE
Sbjct  805   EPNRLLL-----LHG------FLDE  818


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 17/28 (60%)
 Frame = -1

Query  2539  HIVLISNPWCLIVYTRYGKCSILPEVFI  2456
             +IVLIS                 PE FI
Sbjct  387   QIVLIS-----------------PELFI  397


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1769  RLLLLRG  1749
             RLLLL G
Sbjct  808   RLLLLHG  814


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 23/43 (53%)
 Frame = +3

Query  4599  WQVM------IVWQVDRMRIRTWKSLV-----K-----HHMYV  4679
             W+V+      I  QVD  R R    LV     K     HH+YV
Sbjct  503   WEVLGRHGSNI--QVDEVR-R----LVYFEGTKDSPLEHHLYV  538


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5010  VGSLQYLA  5033
             V  LQYLA
Sbjct  715   VEGLQYLA  722


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3190  KTINR  3204
             KTINR
Sbjct  104   KTINR  108


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6919  EKFPS  6905
             EKFPS
Sbjct  800   EKFPS  804


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
 Frame = +1

Query  5323  ELGVDI---AE*ALLDRGEQEMEPVD-PRLEP  5406
             +LGV+I   A+       E+  E  D P LEP
Sbjct  9     QLGVEIFETAD------CEENIESQDRPKLEP  34


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1694  WSALKK  1677
             WS LKK
Sbjct  42    WSQLKK  47


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3358  LSEIMV  3375
             +SEIM+
Sbjct  329   MSEIMI  334


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 14/28 (50%)
 Frame = -2

Query  2244  IFEIFPSFSISVQ-----ISTNAFIFSS  2176
             IF +FP      Q     I    FIF S
Sbjct  436   IFHVFP------QSHEEEI---EFIFAS  454


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  1394  YSLTCC--HH--FF  1365
             YS  CC  +H  FF
Sbjct  555   YSHSCCISQHCDFF  568


 Score = 17.2 bits (33),  Expect(2) = 11783
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4705  IDITMKALIQ  4734
             ID+  K LIQ
Sbjct  341   IDVIDKELIQ  350


 Score = 15.9 bits (30),  Expect(2) = 11783
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4737  ISSEVHIPLGD  4769
             IS E  IP  D
Sbjct  391   ISPELFIPVED  401


 Score = 18.0 bits (35),  Expect(2) = 11784
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  5348  YSAMSTPNSEN  5316
             Y AMS  N EN
Sbjct  85    YLAMSGENREN  95


 Score = 15.1 bits (28),  Expect(2) = 11784
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIY L
Sbjct  82    RIYYL  86


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5740  RLIERAEDS  5766
             RLIE   DS
Sbjct  408   RLIESVPDS  416


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2299  TVFFLYG  2279
             TV F YG
Sbjct  648   TVLFIYG  654


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3242  ILLCFL  3225
             ILL FL
Sbjct  827   ILLSFL  832


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7154  NNESEI  7171
             N+ESE+
Sbjct  290   NDESEV  295


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  1972  LSYFDKTSNSP  1940
             L YF+ T +SP
Sbjct  521   LVYFEGTKDSP  531


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  5082  VTKLTEDR  5105
             VT LT DR
Sbjct  547   VTRLT-DR  553


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 6/19 (31%)
 Frame = +2

Query  6545  LLLNGSLAEEEVVIRSVNF  6601
             LLL G L E       V F
Sbjct  810   LLLHGFLDE------NVHF  822


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2587  HATLEY  2570
             +ATL+Y
Sbjct  124   QATLDY  129


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1196  LSYVQN  1179
             L YV+N
Sbjct  233   LTYVHN  238


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2894  PNSISPL  2874
             P+S+ PL
Sbjct  414   PDSVTPL  420


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7220  YKYKVVKIE  7246
             +KYK   IE
Sbjct  702   FKYKMGQIE  710


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3620  QPDQSE  3637
             +PDQ E
Sbjct  782   HPDQNE  787


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3407  ETFYVD  3424
             E FYV+
Sbjct  33    EPFYVE  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7036  LFYS  7025
             LFYS
Sbjct  97    LFYS  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5540  DEELIR  5557
             +EEL R
Sbjct  135   EEELLR  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6498  LTFVH  6484
             LT+VH
Sbjct  233   LTYVH  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7641  ITRPGW  7658
             I R GW
Sbjct  362   IARAGW  367


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6747  IFPIFP  6730
             IF +FP
Sbjct  436   IFHVFP  441


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  3722  GGNEQVD---KLV  3751
             G N QVD    LV
Sbjct  510   GSNIQVDEVRRLV  522


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6140  PLCVSL  6157
             P CVSL
Sbjct  578   PHCVSL  583


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8112  LWNFWDAG  8135
             LW F D G
Sbjct  767   LWIFYDTG  774


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5707  LRQRK  5721
             LR+RK
Sbjct  139   LRERK  143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  477  PGLLETS  497
            P L ETS
Sbjct  188  PNLVETS  194


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2004  CPQISM  1987
             CP I M
Sbjct  195   CPNIRM  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -3

Query  6851  RLLFYYFQIVL  6819
             RL     QIVL
Sbjct  385   RL-----QIVL  390


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8117  ELLGRRG  8137
             E LGR G
Sbjct  504   EVLGRHG  510


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1580  FPTALF  1563
             +PT LF
Sbjct  646   YPTVLF  651


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3737  LVHFLQ  3720
             L H+LQ
Sbjct  864   LLHYLQ  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8391  RERMR  8405
             RER R
Sbjct  140   RERKR  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  144  GISSY  130
            GI SY
Sbjct  149  GIASY  153


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+++D
Sbjct  397   IPVEDD  402


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3044  VYYDPSKD  3067
             VY++  KD
Sbjct  522   VYFEGTKD  529


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1827  RGRCQR  1810
             RG C+R
Sbjct  689   RGSCHR  694


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1552  LQFLA  1538
             LQ+LA
Sbjct  718   LQYLA  722


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  3760  NQESTIF  3780
             N E T F
Sbjct  92    NRENTLF  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  4502  RGALLVLS  4479
             R A L LS
Sbjct  108   RAAVLMLS  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5254  WGYLGRSGS  5280
             W  LGR GS
Sbjct  503   WEVLGRHGS  511


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6640  CVQLY  6626
             CV LY
Sbjct  580   CVSLY  584


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +2

Query  6290  AFFYKLDIIPIDN  6328
             AF YK+  I ID+
Sbjct  701   AFKYKMGQIEIDD  713


>ref|NP_620161.1|  cell surface glycoprotein CD200 receptor 1 isoform a [Homo sapiens]
Length=348

 GENE ID: 131450 CD200R1 | CD200 receptor 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 15/33 (45%)
 Frame = -1

Query  5008  LLCP---A*YSHLGL----TMCPNKAFLIAESE  4931
             +LCP   A    LGL    T      FL+AE E
Sbjct  1     MLCPWRTA---NLGLLLILTI-----FLVAEAE  25


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  1507  LTI--FLWFLK  1481
             LTI  F W LK
Sbjct  278   LTIVGFIWLLK  288


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  7458  CCASIALSKL  7429
             CC  IAL  L
Sbjct  83    CCPPIALRNL  92


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -2

Query  3315  CQYSVHHVS----HVS  3280
             C+  VH VS    HVS
Sbjct  227   CHWEVHNVSTVTCHVS  242


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6491  NVSTVQC  6511
             NVSTV C
Sbjct  233   NVSTVTC  239


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 3/16 (18%)
 Frame = +2

Query  4820  LAFGSGSLHRMEEKEI  4867
             LA  S SL  M+EK+I
Sbjct  45    LA--SSSLC-MDEKQI  57


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  7021  W--EGDCVT  7001
             W  EGDC T
Sbjct  203   WIPEGDCAT  211


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +2

Query  4415  QKQITKIQNF  4444
             +KQIT  QN+
Sbjct  54    EKQIT--QNY  61


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5569  ESDCSDE  5549
             E +C DE
Sbjct  120   ETNCTDE  126


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  5813  WRWGTMLLGMLMI  5851
             WR  T  LG+L+I
Sbjct  5     WR--TANLGLLLI  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2570  LLVILSI  2550
             LL IL I
Sbjct  12    LLLILTI  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2565  QQYSKV  2582
             Q YSKV
Sbjct  59    QNYSKV  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4314  TAICTAV  4294
             TA+C AV
Sbjct  187   TAVCKAV  193


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8090  LLLIVT  8107
             LLLI T
Sbjct  12    LLLILT  17


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6411  PYII  6422
             PYII
Sbjct  269   PYII  272


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5368  EQEMEP  5385
             E EM+P
Sbjct  308   EDEMQP  313


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8340  YSKIL  8326
             YSK+L
Sbjct  61    YSKVL  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 17/39 (43%)
 Frame = +3

Query  381  WEKIRLR--PGGKKKYKLK-------------HIVWASR  452
            WE I LR  P   K YK K              I W SR
Sbjct  97   WE-IILRGQPSCTKAYK-KETNETKETNCTDERITWVSR  133


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6693  VSREDQ  6710
             VSR DQ
Sbjct  131   VSRPDQ  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  417  KYKL  428
            KYKL
Sbjct  294  KYKL  297


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -1

Query  4642  LILILSTCHTI  4610
             L LIL    TI
Sbjct  12    LLLIL----TI  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  1060  VLVVPAMSL  1034
             VLV P   L
Sbjct  172   VLVTPEVTL  180


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7903  IFTIIV  7920
             I TII+
Sbjct  272   ILTIII  277


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  3917  EAMHGQVD  3940
             EA++ +VD
Sbjct  335   EALQSEVD  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2065  QISSNY  2048
             QI  NY
Sbjct  56    QITQNY  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7712  LQLRSV  7695
             LQ R V
Sbjct  140   LQIRTV  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  769  RPYHLE  786
            R YHL+
Sbjct  166  RGYHLQ  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = +2

Query  4148  TVRAACWW  4171
             TV   C W
Sbjct  222   TVKSTCHW  229


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2821  LYCPFI  2804
             LY P+I
Sbjct  266   LYIPYI  271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6855  LKIIVL  6838
             L II+L
Sbjct  273   LTIIIL  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2119  TSKIKA  2136
             T K+KA
Sbjct  328   TNKVKA  333


>dbj|BAE48231.1|  regulatory factor X4, isoform c [Homo sapiens]
Length=744

 GENE ID: 5992 RFX4 | regulatory factor X, 4 (influences HLA class II
expression) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5110  TSPRRPRATE  5139
             T PRR R TE
Sbjct  15    TRPRRRRSTE  24


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1198  PCLMS  1184
             PCLMS
Sbjct  666   PCLMS  670


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  2650  IHVLIDNYV  2624
             IH + D+YV
Sbjct  465   IHLMFDDYV  473


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6573  SSARLPFNS  6547
             SSA  PFNS
Sbjct  651   SSAQYPFNS  659


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 8/24 (33%)
 Frame = +2

Query  7100  RCSSNITGLLLTRDGGN-SNNESE  7168
             R SS  T L      GN SN+E E
Sbjct  38    RYSSH-TSL------GNVSNDENE  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  774  WPDVP  760
            WP+VP
Sbjct  684  WPEVP  688


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 11/23 (47%)
 Frame = -3

Query  4871  AIS--LFP------PFYGDSLTQ  4827
             AIS  L P      P   DSLTQ
Sbjct  271   AISGVLMPTVLQALP---DSLTQ  290


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3408  SAPTMGSF  3385
             SAP  GSF
Sbjct  455   SAPSFGSF  462


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6373  YTGLS  6387
             YTGLS
Sbjct  547   YTGLS  551


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1202  WSLSY  1188
             WSL Y
Sbjct  561   WSLTY  565


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2716  TSVEV  2730
             TSVEV
Sbjct  529   TSVEV  533


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1884  SAPVSN  1867
             S PVSN
Sbjct  537   SSPVSN  542


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2435  HHPHP  2421
             +HPHP
Sbjct  621   QHPHP  625


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +3

Query  8403  RRAEPAA--DR  8429
             RRA P A  DR
Sbjct  4     RRAHPGAGGDR  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  706  TAIRSAKIT  732
            T I SA IT
Sbjct  344  TVIHSADIT  352


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5988  PVYPQ  6002
             PVYP+
Sbjct  599   PVYPH  603


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1700  NSPTRR  1717
             NSPT R
Sbjct  658   NSPTSR  663


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5342  QNRRYS  5359
             +N RYS
Sbjct  35    ENKRYS  40


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4287  ILRQQY  4304
             I RQQ+
Sbjct  115   IIRQQF  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  3477  LLVTYPAFPN  3448
             LL   P FPN
Sbjct  186   LL---PEFPN  192


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  3504  LTQQIRRLSYKQ  3539
             LTQ IR    KQ
Sbjct  288   LTQVIRKFA-KQ  298


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3807  NMRNI  3821
             N+RNI
Sbjct  313   NLRNI  317


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +2

Query  5534  DS-DEELIRTVRLIKLLYQ  5587
             DS DE   R   LI  LYQ
Sbjct  377   DSRDEH--R--KLITQLYQ  391


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4860  KRYSTQ  4877
             KRYS +
Sbjct  37    KRYSSH  42


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5159  TLELLEE  5179
             TL+ LEE
Sbjct  70    TLQWLEE  76


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  789  LNAWVKV  809
            L+ W KV
Sbjct  299  LDEWLKV  305


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1526  RRAH  1537
             RRAH
Sbjct  4     RRAH  7


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4571  KIIR  4582
             KIIR
Sbjct  114   KIIR  117


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6061  FPHVK  6047
             FP VK
Sbjct  190   FPNVK  194


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  1936  HFW  1928
             HFW
Sbjct  239   HFW  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4860  FSSILWR  4840
             FS IL R
Sbjct  325   FSQILRR  331


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7506  LAWSC  7492
             L WSC
Sbjct  438   LMWSC  442


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5701  KILRQ  5715
             KI RQ
Sbjct  114   KIIRQ  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1796  FPQVT  1810
             FPQ T
Sbjct  120   FPQLT  124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2960  LTEVI  2974
             LT+VI
Sbjct  288   LTQVI  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4574  IIRDYGKQM  4600
             +IR + KQ+
Sbjct  291   VIRKFAKQL  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7893  TLFTIE  7876
             TL+T E
Sbjct  371   TLYTME  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  7538  QQLLGIWGC  7564
             QQ L  W C
Sbjct  434   QQFLLMWSC  442


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP P P P
Sbjct  513   APTPSPVP  520


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4649  PCSNPHPVY  4623
             P SNP P Y
Sbjct  539   PVSNPSPEY  547


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             T  GSP E+
Sbjct  569   TAAGSPAEN  577


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7208  RSELY  7222
             RS LY
Sbjct  88    RSALY  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3759  ESGKYY  3776
             ES  YY
Sbjct  145   ESSQYY  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  703  DTAIR  717
            DT IR
Sbjct  223  DTVIR  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = -2

Query  2574  NIAGDPFHPCGSTLY  2530
             NI G     C S LY
Sbjct  259   NIVG----VCDSILY  269


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4287  ILRQQ  4301
             ILR Q
Sbjct  328   ILRRQ  332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  4845  IEW  4853
             IEW
Sbjct  407   IEW  409


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7918  VSDPPP  7935
             VS+P P
Sbjct  540   VSNPSP  545


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5132  PQREPH  5149
             P+RE H
Sbjct  602   PHREEH  607


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2736  LPHQT  2750
             LPH T
Sbjct  633   LPHDT  637


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  6191  NSSSGRM  6211
             NS   RM
Sbjct  658   NSPTSRM  664


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3153  FPVFRFLNG  3127
             FP F + NG
Sbjct  728   FPGFAYING  736


>pdb|1ZA6|A  Chain A, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
 pdb|1ZA6|C  Chain C, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
 pdb|1ZA6|E  Chain E, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
 pdb|1ZA6|G  Chain G, The Structure Of An Antitumor Ch2-Domain-Deleted Humanized 
Antibody
Length=220


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  100   YPLTFG  105


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8083  ERLTLDC  8103
             ER TL+C
Sbjct  17    ERVTLNC  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -1

Query  4525  YYC------PFTF  4505
             YYC      P TF
Sbjct  92    YYCQQYYSYPLTF  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  196   KVYACEVTH  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  174   SKDSTYSLSSTLT-LS  188


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  183   STLTL  187


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  122  FIFPP  126


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  174   SKDSTY  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -1

Query  7192  ISSSRSEDLGLIVAI  7148
             ISS   ED    VA+
Sbjct  81    ISSVQAED----VAV  91


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8165  LLQYW  8179
             LL YW
Sbjct  52    LLIYW  56


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  177   STYSL  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  202   VTHQGLSSPV  211


>pdb|2BSR|A  Chain A, Crystal Structures And Kir3dl1 Recognition Of Three 
Immunodominant Viral Peptides Complexed To Hla-B2705
 pdb|2BSS|A  Chain A, Crystal Structures And Kir3dl1 Recognition Of Three 
Immunodominant Viral Peptides Complexed To Hla-B2705
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  540  QTGSEELRSL---YN  575
            QT  E+LR L   YN
Sbjct  72   QTDREDLRTLLRYYN  86


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DLR L
Sbjct  76    EDLRTL  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  11    SVSRPGRGE  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


>pdb|1SYV|A  Chain A, Hla-B4405 Complexed To The Dominant Self Ligand Eefgraygf
 pdb|3DX8|A  Chain A, Crystal Structure Of B4405 Presenting A 10mer Ebv Epitope
 pdb|3DXA|A  Chain A, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 
And Decamer Ebv Antigen
 7 more sequence titles
 pdb|3DXA|F  Chain F, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 
And Decamer Ebv Antigen
 pdb|3DXA|K  Chain K, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 
And Decamer Ebv Antigen
 pdb|3KPP|A  Chain A, Crystal Structure Of Hla B4405 In Complex With Eeylqafty 
A Self Peptide From The Abcd3 Protein
 pdb|3KPR|A  Chain A, Crystal Structure Of The Lc13 Tcr In Complex With Hla 
B4405 Bound To Eeylkawtf A Mimotope
 pdb|3KPR|F  Chain F, Crystal Structure Of The Lc13 Tcr In Complex With Hla 
B4405 Bound To Eeylkawtf A Mimotope
 pdb|3KPS|A  Chain A, Crystal Structure Of The Lc13 Tcr In Complex With Hla 
B4405 Bound To Eeylqafty A Self Peptide From The Abcd3 Protein
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  39    DATSPRKEPRA  49


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  2096  ENLK-----CNQSE  2070
             ENL       NQSE
Sbjct  76    ENLRTALRYYNQSE  89


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  94    IIQRMY  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  12    MSRPGR  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  159   YLEGLC  164


>pdb|1R70|B  Chain B, Model Of Human Iga2 Determined By Solution Scattering, 
Curve Fitting And Homology Modelling
 pdb|1R70|D  Chain D, Model Of Human Iga2 Determined By Solution Scattering, 
Curve Fitting And Homology Modelling
 pdb|3CM9|A  Chain A, Solution Structure Of Human Siga2
 pdb|3CM9|B  Chain B, Solution Structure Of Human Siga2
 pdb|3CM9|C  Chain C, Solution Structure Of Human Siga2
 pdb|3CM9|D  Chain D, Solution Structure Of Human Siga2
Length=462


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  4366  PCTVPPNPP  4340
             PC VPP PP
Sbjct  222   PCPVPPPPP  230


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  182  TARDFP  165
            TAR+FP
Sbjct  171  TARNFP  176


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6691  DSFSCIV  6671
             D FSC V
Sbjct  418   DTFSCMV  424


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -1

Query  9031  PVPP-----RPRL  9008
             PVPP      PRL
Sbjct  224   PVPPPPPCCHPRL  236


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6369  SLHRP  6383
             SLHRP
Sbjct  237   SLHRP  241


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7276  EKSGAERKK  7302
             E SGAE KK
Sbjct  6     EQSGAEVKK  14


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6642  DVFSCTIMV  6616
             D FSC  MV
Sbjct  418   DTFSC--MV  424


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3843  LVILTC  3860
             LV LTC
Sbjct  354   LVTLTC  359


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4814  FSCM  4803
             FSCM
Sbjct  420   FSCM  423


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = +3

Query  441  WASRELER------FAV  473
            WASR+ E       FAV
Sbjct  388  WASRQ-EPSQGTTTFAV  403


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -2

Query  3213  CTASVNCFTS--LVW---AP  3169
             C AS   FTS  L W   AP
Sbjct  23    CKASGYSFTSYGLHWVRQAP  42


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8917  ITWPES  8934
             +TW ES
Sbjct  161   VTWSES  166


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2091  IFPLAL  2108
             +FPL L
Sbjct  130   VFPLSL  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8694  QGYFP  8708
             QG+FP
Sbjct  151   QGFFP  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  4655  TFPCSNPHP  4629
             TF C   HP
Sbjct  310   TFTCTAAHP  318


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             +SC+V H
Sbjct  420   FSCMVGH  426


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1254  EQASQEVK  1277
             EQ   EVK
Sbjct  6     EQSGAEVK  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5264  KYPHKF  5247
             KY +KF
Sbjct  60    KYSQKF  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2905  NLTC  2894
             NLTC
Sbjct  253   NLTC  256


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  7865  FAVLSIVNRV  7894
             FAV SI  RV
Sbjct  401   FAVTSIL-RV  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6762  VTLVEQNG  6785
             V L EQ G
Sbjct  2     VKLLEQSG  9


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3075  QKYRSR  3092
             QK+R R
Sbjct  63    QKFRGR  68


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  6849  SL-SNPQEG  6872
             SL S PQ+G
Sbjct  134   SLDSTPQDG  142


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4065  VSCPV  4051
             V CPV
Sbjct  221   VPCPV  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  226   PPPPP  230


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5570  IKLLYQS  5590
             +KLL QS
Sbjct  2     VKLLEQS  8


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5482  LGNESN  5465
             LG E N
Sbjct  248   LGSEAN  253


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4900  WSASSG  4883
             W  SSG
Sbjct  271   WTPSSG  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  2024  LVG-PTPVNI  2050
             L G PT VN+
Sbjct  441   LAGKPTHVNV  450


>emb|CAG29712.1|  immunoglobulin heavy chain [Homo sapiens]
 emb|CAR62725.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=110


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -1

Query  3895  TAGYY------FFCYY  3866
             TA YY      ++CYY
Sbjct  91    TAVYYCASSRSYYCYY  106


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 16/32 (50%)
 Frame = -1

Query  2062  ISSNYVD----R--------C---RSY*YCTY  2012
             IS  YV+    R        C   RSY YC Y
Sbjct  76    ISTAYVELSSLRSDDTAVYYCASSRSY-YCYY  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  83    LSSLRS  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7282  SGAERKK  7302
             SGAE KK
Sbjct  7     SGAEVKK  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6025  YYFLWV  6008
             YY  WV
Sbjct  32    YYIHWV  37


>pdb|1N2R|A  Chain A, A Natural Selected Dimorphism In Hla B44 Alters Self, 
Peptide Reportoire And T Cell Recognition.
 pdb|1SYS|A  Chain A, Crystal Structure Of Hla, B4403, And Peptide Eeptvikky
 pdb|3DX7|A  Chain A, Crystal Structure Of Hla-B4403 Presenting 10mer Ebv 
Antigen
 pdb|3KPN|A  Chain A, Crystal Structure Of Hla B4403 In Complex With Eeylqafty 
A Self Peptide From The Abcd3 Protein
 pdb|3KPO|A  Chain A, Crystal Structure Of Hla B4403 In Complex With Eeylkawtf, 
A Mimotope
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  39    DATSPRKEPRA  49


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  2096  ENLK-----CNQSE  2070
             ENL       NQSE
Sbjct  76    ENLRTALRYYNQSE  89


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  94    IIQRMY  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  12    MSRPGR  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  159   YLEGLC  164


>pdb|2ZKH|H  Chain H, Human Thrombopoietin Neutralizing Antibody Tn1 Fab
Length=217


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = -2

Query  4053  VSAG-ITSASIYPLA  4012
             VSA   T  S+YPLA
Sbjct  114   VSAAKTTPPSVYPLA  128


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             WVR+SP
Sbjct  36    WVRQSP  41


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM+W R+
Sbjct  33    WMDWVRQ  39


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5752  RAEDSG  5769
             RAED G
Sbjct  89    RAEDTG  94


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8697  GYFPD  8711
             GYFP+
Sbjct  147   GYFPE  151


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  8256  TLS----VPSAT  8233
             TLS    VPS T
Sbjct  179   TLSSSVTVPSST  190


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S+YPL
Sbjct  123   SVYPL  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7482  QTVSCN  7465
             +TV CN
Sbjct  194   ETVTCN  199


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +3

Query  8859  MD----DPEREVLEW  8891
             MD     PE   LEW
Sbjct  34    MDWVRQSPEKG-LEW  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6693  VSRED  6707
             VSR+D
Sbjct  72    VSRDD  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3940  VYLSM  3926
             VYL M
Sbjct  81    VYLQM  85


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2362  FPEVLSS  2342
             FP VL S
Sbjct  169   FPAVLQS  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  88    LRAE  91


>pdb|3HXO|A  Chain A, Crystal Structure Of Von Willebrand Factor (Vwf) A1 
Domain In Complex With Dna Aptamer Arc1172, An Inhibitor Of 
Vwf- Platelet Binding
 pdb|3HXQ|A  Chain A, Crystal Structure Of Von Willebrand Factor (Vwf) A1 
Domain In Complex With Dna Aptamer Arc1172, An Inhibitor Of 
Vwf- Platelet Binding
Length=209


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  2390  GLKKKKSVTVLDVG  2431
             GLKKKK V V  VG
Sbjct  144   GLKKKK-VIVIPVG  156


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  2898  VRFTQGLK  2921
             VR+ QGLK
Sbjct  139   VRYVQGLK  146


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  2193  AFIFSSVN  2170
             AF+ SSV+
Sbjct  178   AFVLSSVD  185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5376  FLLSSVE  5356
             F LSSV+
Sbjct  179   FVLSSVD  185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8404  DELSQQ  8421
             DEL QQ
Sbjct  185   DELEQQ  190


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  589  RVATVLYND  563
            RVA V Y D
Sbjct  56   RVAVVEYHD  64


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4244  ELKKIIGQV  4270
             EL  I  QV
Sbjct  80    ELRRIASQV  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2384  DVVFLIE  2364
             D VFL +
Sbjct  18    DLVFLLD  24


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4734  RISSEV  4751
             RI S+V
Sbjct  83    RIASQV  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2471  KYTAFTI  2491
             KYT F I
Sbjct  103   KYTLFQI  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6074  EQMHEDIIS  6100
             EQ  ++I+S
Sbjct  188   EQQRDEIVS  196


>pdb|1M6O|A  Chain A, Crystal Structure Of Hla B4402 In Complex With Hla Dpa0201 
Peptide
 pdb|3DX6|A  Chain A, Crystal Structure Of B4402 Presenting A 10mer Ebv Epitope
 pdb|3KPL|A  Chain A, Crystal Structure Of Hla B4402 In Complex With Eeylqafty 
A Self Peptide From The Abcd3 Protein
 6 more sequence titles
 pdb|3KPM|A  Chain A, Crystal Structure Of Hla B4402 In Complex With Eeylkawtf, 
A Mimotope
 pdb|3L3D|A  Chain A, Crystal Structure Of Hla-B4402 In Complex With The F3a 
Mutant Of A Self-Peptide Derived From Dpa0201
 pdb|3L3G|A  Chain A, Crystal Structure Of Hla-B4402 In Complex With The R5a 
Mutant Of A Self-Peptide Derived From Dpa0201
 pdb|3L3I|A  Chain A, Crystal Structure Of Hla-B4402 In Complex With The F7a 
Mutant Of A Self-Peptide Derived From Dpa0201
 pdb|3L3J|A  Chain A, Crystal Structure Of Hla-B4402 In Complex With The F3aR5A 
Double Mutant Of A Self-Peptide Derived From Dpa0201
 pdb|3L3K|A  Chain A, Crystal Structure Of Hla-B4402 In Complex With The R5aF7A 
Double Mutant Of A Self-Peptide Derived From Dpa0201
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  39    DATSPRKEPRA  49


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  2096  ENLK-----CNQSE  2070
             ENL       NQSE
Sbjct  76    ENLRTALRYYNQSE  89


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  94    IIQRMY  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  12    MSRPGR  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  159   YLEGLC  164


>ref|NP_932064.1|  dipeptidyl peptidase 8 isoform 3 [Homo sapiens]
 sp|Q6V1X1.1|DPP8_HUMAN  RecName: Full=Dipeptidyl peptidase 8; Short=DP8; AltName: Full=Dipeptidyl 
peptidase VIII; Short=DPP VIII; AltName: Full=Prolyl 
dipeptidase DPP8; AltName: Full=Dipeptidyl peptidase IV-related 
protein 1; Short=DPRP-1
Length=898

 GENE ID: 54878 DPP8 | dipeptidyl-peptidase 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/25 (44%), Positives = 13/25 (52%), Gaps = 11/25 (44%)
 Frame = +2

Query  4370  RIVDIIATDIQTKELQKQITKIQNF  4444
             RI+D+I  D   KEL      IQ F
Sbjct  355   RIIDVI--D---KEL------IQPF  368


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 11/25 (44%)
 Frame = -2

Query  4800  DPNMLLLPI*HPLVGCVLLNLFLDE  4726
             +PN LLL     L G      FLDE
Sbjct  821   EPNRLLL-----LHG------FLDE  834


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/28 (32%), Positives = 10/28 (35%), Gaps = 17/28 (60%)
 Frame = -1

Query  2539  HIVLISNPWCLIVYTRYGKCSILPEVFI  2456
             +IVLIS                 PE FI
Sbjct  403   QIVLIS-----------------PELFI  413


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1769  RLLLLRG  1749
             RLLLL G
Sbjct  824   RLLLLHG  830


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 23/43 (53%)
 Frame = +3

Query  4599  WQVM------IVWQVDRMRIRTWKSLV-----K-----HHMYV  4679
             W+V+      I  QVD  R R    LV     K     HH+YV
Sbjct  519   WEVLGRHGSNI--QVDEVR-R----LVYFEGTKDSPLEHHLYV  554


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5010  VGSLQYLA  5033
             V  LQYLA
Sbjct  731   VEGLQYLA  738


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3190  KTINR  3204
             KTINR
Sbjct  120   KTINR  124


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6919  EKFPS  6905
             EKFPS
Sbjct  816   EKFPS  820


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 10/32 (31%)
 Frame = +1

Query  5323  ELGVDI---AE*ALLDRGEQEMEPVD-PRLEP  5406
             +LGV+I   A+       E+  E  D P LEP
Sbjct  25    QLGVEIFETAD------CEENIESQDRPKLEP  50


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1694  WSALKK  1677
             WS LKK
Sbjct  58    WSQLKK  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3358  LSEIMV  3375
             +SEIM+
Sbjct  345   MSEIMI  350


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 14/28 (50%)
 Frame = -2

Query  2244  IFEIFPSFSISVQ-----ISTNAFIFSS  2176
             IF +FP      Q     I    FIF S
Sbjct  452   IFHVFP------QSHEEEI---EFIFAS  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  1394  YSLTCC--HH--FF  1365
             YS  CC  +H  FF
Sbjct  571   YSHSCCISQHCDFF  584


 Score = 17.2 bits (33),  Expect(2) = 11701
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4705  IDITMKALIQ  4734
             ID+  K LIQ
Sbjct  357   IDVIDKELIQ  366


 Score = 15.9 bits (30),  Expect(2) = 11701
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  4737  ISSEVHIPLGD  4769
             IS E  IP  D
Sbjct  407   ISPELFIPVED  417


 Score = 18.0 bits (35),  Expect(2) = 11702
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  5348  YSAMSTPNSEN  5316
             Y AMS  N EN
Sbjct  101   YLAMSGENREN  111


 Score = 15.1 bits (28),  Expect(2) = 11702
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIY L
Sbjct  98    RIYYL  102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5740  RLIERAEDS  5766
             RLIE   DS
Sbjct  424   RLIESVPDS  432


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2299  TVFFLYG  2279
             TV F YG
Sbjct  664   TVLFIYG  670


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3242  ILLCFL  3225
             ILL FL
Sbjct  843   ILLSFL  848


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7154  NNESEI  7171
             N+ESE+
Sbjct  306   NDESEV  311


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  1972  LSYFDKTSNSP  1940
             L YF+ T +SP
Sbjct  537   LVYFEGTKDSP  547


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  5082  VTKLTEDR  5105
             VT LT DR
Sbjct  563   VTRLT-DR  569


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 6/19 (31%)
 Frame = +2

Query  6545  LLLNGSLAEEEVVIRSVNF  6601
             LLL G L E       V F
Sbjct  826   LLLHGFLDE------NVHF  838


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2587  HATLEY  2570
             +ATL+Y
Sbjct  140   QATLDY  145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1196  LSYVQN  1179
             L YV+N
Sbjct  249   LTYVHN  254


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2894  PNSISPL  2874
             P+S+ PL
Sbjct  430   PDSVTPL  436


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7220  YKYKVVKIE  7246
             +KYK   IE
Sbjct  718   FKYKMGQIE  726


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3620  QPDQSE  3637
             +PDQ E
Sbjct  798   HPDQNE  803


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3407  ETFYVD  3424
             E FYV+
Sbjct  49    EPFYVE  54


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7036  LFYS  7025
             LFYS
Sbjct  113   LFYS  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5540  DEELIR  5557
             +EEL R
Sbjct  151   EEELLR  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6498  LTFVH  6484
             LT+VH
Sbjct  249   LTYVH  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7641  ITRPGW  7658
             I R GW
Sbjct  378   IARAGW  383


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6747  IFPIFP  6730
             IF +FP
Sbjct  452   IFHVFP  457


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  3722  GGNEQVD---KLV  3751
             G N QVD    LV
Sbjct  526   GSNIQVDEVRRLV  538


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6140  PLCVSL  6157
             P CVSL
Sbjct  594   PHCVSL  599


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8112  LWNFWDAG  8135
             LW F D G
Sbjct  783   LWIFYDTG  790


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5707  LRQRK  5721
             LR+RK
Sbjct  155   LRERK  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  477  PGLLETS  497
            P L ETS
Sbjct  204  PNLVETS  210


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2004  CPQISM  1987
             CP I M
Sbjct  211   CPNIRM  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -3

Query  6851  RLLFYYFQIVL  6819
             RL     QIVL
Sbjct  401   RL-----QIVL  406


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8117  ELLGRRG  8137
             E LGR G
Sbjct  520   EVLGRHG  526


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1580  FPTALF  1563
             +PT LF
Sbjct  662   YPTVLF  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3737  LVHFLQ  3720
             L H+LQ
Sbjct  880   LLHYLQ  885


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8391  RERMR  8405
             RER R
Sbjct  156   RERKR  160


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  144  GISSY  130
            GI SY
Sbjct  165  GIASY  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6314  IPIDND  6331
             IP+++D
Sbjct  413   IPVEDD  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3044  VYYDPSKD  3067
             VY++  KD
Sbjct  538   VYFEGTKD  545


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1827  RGRCQR  1810
             RG C+R
Sbjct  705   RGSCHR  710


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1552  LQFLA  1538
             LQ+LA
Sbjct  734   LQYLA  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  3760  NQESTIF  3780
             N E T F
Sbjct  108   NRENTLF  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  4502  RGALLVLS  4479
             R A L LS
Sbjct  124   RAAVLMLS  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5254  WGYLGRSGS  5280
             W  LGR GS
Sbjct  519   WEVLGRHGS  527


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6640  CVQLY  6626
             CV LY
Sbjct  596   CVSLY  600


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +2

Query  6290  AFFYKLDIIPIDN  6328
             AF YK+  I ID+
Sbjct  717   AFKYKMGQIEIDD  729


>pdb|1HKF|A  Chain A, The Three Dimensional Structure Of Nk Cell Receptor 
Nkp44, A Triggering Partner In Natural Cytotoxicity
Length=122


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  3904  SAKRRSHAWTSR  3939
             S K R  AWTSR
Sbjct  61    SSKPRTMAWTSR  72


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  8006  IRLVNGS----LAL-----IWDD  8047
             IRLV  S    +A      IWDD
Sbjct  56    IRLVTSSKPRTMAWTSRFTIWDD  78


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5905  EGSNHH  5922
             EGS HH
Sbjct  2     EGSHHH  7


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5752  RAEDSG  5769
             R EDSG
Sbjct  92    REEDSG  97


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  4699  GFIDITMKALIQE  4737
             GF  +TM  L +E
Sbjct  82    GFFTVTMTDLREE  94


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5018  RSYLVMS  4998
             R YLV S
Sbjct  116   RFYLVVS  122


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9058  MQDLR  9044
             M DLR
Sbjct  88    MTDLR  92


>ref|NP_998774.2|  family with sequence similarity 19 (chemokine (C-C motif)-like), 
member A1 precursor [Homo sapiens]
Length=133

 GENE ID: 407738 FAM19A1 | family with sequence similarity 19 (chemokine (C-C
motif)-like), member A1 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 24/51 (47%)
 Frame = -2

Query  7482  QTV--SC----------NRCCC--ASIALSKLFC----C-----C-TIPDN  7402
             QTV  SC          NR  C  ASI   K  C    C     C T PDN
Sbjct  63    QTVKCSCLPGKVAGTTRNRPSCVDASIVIGKWWCEMEPCLEGEECKTLPDN  113


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  105  CARLLC  122
            CA LLC
Sbjct  18   CAMLLC  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6355  TCQLIA  6338
             TC+ IA
Sbjct  43    TCEVIA  48


>ref|NP_775829.2|  FYVE, RhoGEF and PH domain-containing protein 2 [Homo sapiens]
Length=655

 GENE ID: 221472 FGD2 | FYVE, RhoGEF and PH domain containing 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 9/24 (37%)
 Frame = +2

Query  2831  LPE----KDSWTVN----D-IQKL  2875
             LPE     D WT N    D IQKL
Sbjct  166   LPELQRRLDDWTANPRIGDVIQKL  189


 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  1949  QFPLSFLVS  1923
             +FP SFLVS
Sbjct  382   EFPHSFLVS  390


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  2342  RTQDFWEV-Q-LG  2374
             R QD WEV Q LG
Sbjct  296   RLQDLWEVYQRLG  308


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4736  SWMRAF  4719
             SWM AF
Sbjct  408   SWMQAF  413


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  292  EYAKNFD  312
            EY KNF+
Sbjct  198  EYVKNFE  204


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  8346  GGKWSKSSVIGW  8381
             G KW KS   GW
Sbjct  555   GDKWGKSGPRGW  566


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/32 (34%), Positives = 14/32 (43%), Gaps = 13/32 (40%)
 Frame = +1

Query  8407  EL---SQQQ-IGWEQHLETWKNMEQSQVAIQQ  8490
             EL   SQ++ I W         M+  Q AI Q
Sbjct  397   ELQARSQEEMISW---------MQAFQAAIDQ  419


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4394  DIQTKELQ  4417
             DIQ  ELQ
Sbjct  437   DIQEQELQ  444


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  9055  QDLRARHSPVP  9023
             QD+RA H  +P
Sbjct  584   QDMRA-HTSIP  593


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 8/23 (34%)
 Frame = -2

Query  6888  VTISGS---PPEDCLKIIV--LL  6835
             VT SGS    PE   K IV  LL
Sbjct  92    VTLSGSGTQEPE---KKIVQELL  111


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  1065  QEQ-IGWM  1085
             QE+ I WM
Sbjct  403   QEEMISWM  410


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6589  ICQFHGQ  6609
             I QFH Q
Sbjct  157   IYQFHSQ  163


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1875  QEQMI  1889
             QE+MI
Sbjct  403   QEEMI  407


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7177  SEDLGL  7160
             SE+LGL
Sbjct  445   SEELGL  450


 Score = 16.8 bits (32),  Expect(2) = 10935
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  137  EIPQTLLVS  163
            E P+  LVS
Sbjct  382  EFPHSFLVS  390


 Score = 16.8 bits (32),  Expect(2) = 10935
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  184  APEQGPE  204
            A  QGPE
Sbjct  429  AAAQGPE  435


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -2

Query  8946  TPDAALGPRDEML  8908
             TP+AA  PR + L
Sbjct  24    TPEAA--PRGQRL  34


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  1582  HFQQPFFLGALQ  1547
             +F+  FFL  LQ
Sbjct  159   QFHSQFFLPELQ  170


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2912  GIKVRQL  2932
             G KVR+L
Sbjct  372   GMKVREL  378


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3122  QEPFKNL  3142
             QEPF  L
Sbjct  468   QEPFNAL  474


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  3070  NSRNTEAGAR  3099
             NSR  EA  R
Sbjct  21    NSRTPEAAPR  30


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2375  FLIELPRSLE  2346
             FL EL R L+
Sbjct  165   FLPELQRRLD  174


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7604  ASWSNKS  7624
             A W +KS
Sbjct  211   ATWTDKS  217


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7412  IVQQQNNLLR  7441
             IV   N LLR
Sbjct  313   IVDPSNTLLR  322


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8335  QNPFQAL  8315
             Q PF AL
Sbjct  468   QEPFNAL  474


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3967  LYTF  3978
             LYTF
Sbjct  618   LYTF  621


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8455  SRSRDAAP  8432
             SR  +AAP
Sbjct  22    SRTPEAAP  29


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = +2

Query  2525  YQYNVLPQGWKGSPAIFQ  2578
             YQ  V PQ   G P +FQ
Sbjct  597   YQVTVGPQ---GDPRVFQ  611


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +2

Query  5543  EELIRTVRLIKLLYQSSK  5596
             +EL  T R       SSK
Sbjct  130   QELLKTAR-------SSK  140


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  303  FGVLTSRR  280
            F  LT RR
Sbjct  471  FNALTRRR  478


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2545  TGMER  2559
             T MER
Sbjct  292   TEMER  296


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3563  GLEVNIV  3583
             GLE +IV
Sbjct  308   GLEDDIV  314


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1968  DSMIRY  1985
             D M RY
Sbjct  335   DPMERY  340


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  870  ATPQDL  887
            A PQD+
Sbjct  581  AAPQDM  586


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5291  ILQQLL  5308
             I Q+LL
Sbjct  106   IVQELL  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3203  EAVQKI  3220
             E VQ I
Sbjct  244   EPVQRI  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6413  WELAQRIPLD  6384
             WE  QR  L+
Sbjct  301   WEVYQRLGLE  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5537  SDEELI  5554
             S EE+I
Sbjct  402   SQEEMI  407


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  8760  GWC  8768
             GWC
Sbjct  565   GWC  567


>ref|NP_003317.1|  tumor necrosis factor ligand superfamily member 4 [Homo sapiens]
Length=183

 GENE ID: 7292 TNFSF4 | tumor necrosis factor (ligand) superfamily, member 4
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +3

Query  714  QVSQNYPIVQNI  749
            QVS+ YP +Q I
Sbjct  51   QVSHRYPRIQSI  62


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +2

Query  6626  VQLNTSVEINC  6658
             VQ N SV INC
Sbjct  88    VQ-NNSVIINC  97


 Score = 19.3 bits (38),  Expect(2) =  1854
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5902  HRYPII  5885
             HRYP I
Sbjct  54    HRYPRI  59


 Score = 18.5 bits (36),  Expect(2) =  1854
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5890  IIDCD  5876
             II+CD
Sbjct  94    IINCD  98


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3677  KEKVYL  3694
             K+KVYL
Sbjct  146   KDKVYL  151


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +1

Query  856  HYQK--EP  873
            HYQK  EP
Sbjct  118  HYQKDEEP  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  5377  MEPVDPRLE  5403
             ME V P LE
Sbjct  1     MERVQP-LE  8


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3239  LLCF  3228
             LLCF
Sbjct  37    LLCF  40


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  9133  VSQRAPRLRS  9104
             VS+R PR  S
Sbjct  52    VSHRYPRIQS  61


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  48  VSQRAPRLRS  19
           VS+R PR  S
Sbjct  52  VSHRYPRIQS  61


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3193  FYIIS  3179
             FY IS
Sbjct  100   FYLIS  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -1

Query  7906  ISLPNSIHYRK  7874
             ISL    HY K
Sbjct  115   ISL----HYQK  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2793  NSILIN  2810
             NS+ IN
Sbjct  91    NSVIIN  96


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  955  SLMV  944
            SLMV
Sbjct  137  SLMV  140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2032  TYTCQH  2049
             TY C H
Sbjct  41    TYICLH  46


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4740  SSEVHIPL  4763
             S EV I L
Sbjct  110   SQEVNISL  117


>ref|NP_003584.2|  forkhead box protein N1 [Homo sapiens]
Length=648

 GENE ID: 8456 FOXN1 | forkhead box N1 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 8/24 (33%)
 Frame = -2

Query  1920  LPGKLISSNTVSSAPVSNRASFSC  1849
             LPG        S AP S  A FSC
Sbjct  33    LPG--------SPAPQSKHAGFSC  48


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  319  RLEGER  336
            RLEGER
Sbjct  18   RLEGER  23


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  3560  NPAKLDKL  3537
             NPAK DK+
Sbjct  349   NPAKIDKM  356


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2211  QRWKRK  2228
             Q WKRK
Sbjct  361   QKWKRK  366


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 16/54 (29%), Positives = 21/54 (38%), Gaps = 27/54 (50%)
 Frame = -2

Query  519  PVFVYSLLMFL------TGQD*LRIVLAPCLPI--LYVLIYIFSFPLALTEFFP  382
            P++ YS L F+      TG           LP+      IY F     +TE FP
Sbjct  272  PIYSYSILIFMALKNSKTG----------SLPVSE----IYNF-----MTEHFP  306


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  203  KAKGKPEEL  229
            K   KPEEL
Sbjct  373  KSMAKPEEL  381


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -3

Query  7550  PGAVDPLGIFPQP  7512
             PG   PL  FPQP
Sbjct  465   PGPPQPL--FPQP  475


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = -2

Query  2613  FLKGSKIFVMLLWNIAGDPFHP  2548
             FLKGS             PFHP
Sbjct  115   FLKGSH-----------APFHP  125


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3065  LLMGH  3051
             LLMGH
Sbjct  442   LLMGH  446


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1104  PVGEIY  1121
             PV EIY
Sbjct  293   PVSEIY  298


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  3788  IDKAQDEHEK  3817
             IDK Q+E +K
Sbjct  353   IDKMQEELQK  362


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2031  DLHLST  2048
             DLHL T
Sbjct  610   DLHLTT  615


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5317  FSELGVDIAE  5346
             F E  VD+AE
Sbjct  158   FEEIPVDVAE  167


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  3438  LLAAPST*KVSAPTM  3394
             LLA PS     A TM
Sbjct  505   LLAEPS----PARTM  515


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1401  PGHKARVLAE  1430
             P H A  LAE
Sbjct  499   PSHSAKLLAE  508


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2543  PQGWKGS  2563
             P GWK S
Sbjct  312   PDGWKNS  318


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7168  DLQTWRR  7188
             +LQ W R
Sbjct  359   ELQKWKR  365


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  48   LGNPLL  65
            LG PLL
Sbjct  392  LGSPLL  397


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  9133  LGNPLL  9150
             LG PLL
Sbjct  392   LGSPLL  397


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2949  PLRSLH  2932
             PL SLH
Sbjct  422   PLHSLH  427


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8824  TPACY  8838
             TP CY
Sbjct  447   TPSCY  451


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1436  HCFSQNSCL  1410
             HCF    CL
Sbjct  579   HCFPPGPCL  587


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5490  ETNLAMK  5470
             ET LA+K
Sbjct  139   ETTLALK  145


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3753  VLESG  3767
             VLESG
Sbjct  206   VLESG  210


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5444  PIAIVKSVA  5470
             PIA+ KS A
Sbjct  368   PIAVRKSMA  376


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 9/28 (32%)
 Frame = +2

Query  8858  DG*PGERSVRVEV*QPPSISSRGPRAAS  8941
             DG P ER         PS     PR AS
Sbjct  54    DG-PPERT--------PSLPPHSPRIAS  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7707  LKNRKT  7724
             LKN KT
Sbjct  284   LKNSKT  289


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  7643  DSKS----VPEIY  7617
             +SK     V EIY
Sbjct  286   NSKTGSLPVSEIY  298


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2433  SPTSS  2419
             SPTSS
Sbjct  565   SPTSS  569


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  8035  YLGRSAEPVPL  8067
             YL  S  PV L
Sbjct  637   YLSPSSKPVAL  647


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/23 (39%), Positives = 11/23 (47%), Gaps = 8/23 (34%)
 Frame = -2

Query  4722  FHSDVY----KTIP*LSLK-HTY  4669
             FH DV+     T   L LK H +
Sbjct  130   FHEDVFPEAETT---LALKGHSF  149


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6788  YSILLY  6771
             YSIL +
Sbjct  276   YSILIF  281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2053  WKKSV  2067
             WK SV
Sbjct  315   WKNSV  319


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -1

Query  9037  HS--PVP-PRPRLPGKSP  8993
             HS  P P P    PGK P
Sbjct  424   HSLHPAPGP---IPGKNP  438


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7918  VSDPPP  7935
             VSD PP
Sbjct  52    VSDGPP  57


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  763  YIRPYH  780
            Y RP+H
Sbjct  126  YKRPFH  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2228  LPFPS  2214
             LP+PS
Sbjct  184   LPYPS  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6398  FEPIPI  6415
             FE IP+
Sbjct  158   FEEIPV  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  748  MFC  740
            MFC
Sbjct  213  MFC  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7491  LMPQTVSC  7468
             LM +T SC
Sbjct  443   LMGHTPSC  450


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8214  SMPQP  8228
             SMP P
Sbjct  570   SMPPP  574


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7733  FLAGF  7719
             FL GF
Sbjct  171   FLPGF  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4647  WKSLVKHHM  4673
             WK  V H +
Sbjct  315   WKNSVRHNL  323


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3789  IPSKN  3775
             IP KN
Sbjct  433   IPGKN  437


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4354  PPNPP  4340
             PP PP
Sbjct  464   PPGPP  468


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  468  AVNPGL  485
            A+NP L
Sbjct  531  AINPSL  536


>sp|P30481.1|1B44_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-44 alpha 
chain; AltName: Full=MHC class I antigen B*44; AltName: 
Full=Bw-44; Flags: Precursor
Length=362

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2939  LLRGTKALTE  2968
             LL G  ALTE
Sbjct  12    LLWGAVALTE  21


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  2096  ENLK-----CNQSE  2070
             ENL       NQSE
Sbjct  100   ENLRTALRYYNQSE  113


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  118   IIQRMY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  183   YLEGLC  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2022  TVPI  2011
             TVPI
Sbjct  305   TVPI  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  8724  CSSANQGS--SL  8695
             CS   QGS  SL
Sbjct  349   CSDSAQGSDVSL  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3494  VTLTDT  3511
             V LT+T
Sbjct  17    VALTET  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  809  YFY  801
            YFY
Sbjct  31   YFY  33


>sp|P03989.2|1B27_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-27 alpha 
chain; AltName: Full=MHC class I antigen B*27; Flags: Precursor
Length=362

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  540  QTGSEELRSL---YN  575
            QT  E+LR L   YN
Sbjct  96   QTDREDLRTLLRYYN  110


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2939  LLRGTKALTE  2968
             LL G  ALTE
Sbjct  12    LLWGAVALTE  21


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DLR L
Sbjct  100   EDLRTL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  35    SVSRPGRGE  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2022  TVPI  2011
             TVPI
Sbjct  305   TVPI  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  8724  CSSANQGS--SL  8695
             CS   QGS  SL
Sbjct  349   CSDSAQGSDVSL  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3494  VTLTDT  3511
             V LT+T
Sbjct  17    VALTET  22


>ref|NP_789792.1|  NACHT, LRR and PYD domains-containing protein 14 [Homo sapiens]
Length=1093

 GENE ID: 338323 NLRP14 | NLR family, pyrin domain containing 14 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  5490  HNKSLRHL  5513
             HNKSL HL
Sbjct  898   HNKSLTHL  905


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +1

Query  8080  LERLTLDCNEDCG  8118
             LERL L   E CG
Sbjct  817   LERLSL---ESCG  826


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  7483  PDCELQQMLL  7454
             P+C LQ +LL
Sbjct  700   PNCKLQKLLL  709


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5490  HNKSLRHL  5513
             HNK L HL
Sbjct  727   HNKNLMHL  734


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  2872  LLYVIDS  2852
             LL++IDS
Sbjct  254   LLFIIDS  260


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             LEE+NK
Sbjct  19    LEELNK  24


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  927   MQML---KETINEEA  962
             +Q L   KE  +EEA
Sbjct  1045  LQVLGLCKEAFDEEA  1059


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 15/27 (55%)
 Frame = +2

Query  8093  LLIVTRI---------------VELLG  8128
             LL+ TR                VELLG
Sbjct  303   LLVTTRLTTSKRLKQLLKNHHYVELLG  329


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = -2

Query  4764  LVGCVL-----LNL  4738
             L GCVL     L+L
Sbjct  936   LMGCVLTNACCLDL  949


 Score = 18.0 bits (35),  Expect(2) =  6200
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +1

Query  5068  HLCL---VL  5085
             HLCL   VL
Sbjct  847   HLCLADNVL  855


 Score = 16.3 bits (31),  Expect(2) =  6200
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5022  QYLALA  5039
             +YL LA
Sbjct  833   EYLSLA  838


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7685  TSLIH  7699
             TSLIH
Sbjct  723   TSLIH  727


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  521  SQYLST  504
            S+YLST
Sbjct  889  SEYLST  894


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1161  MYSPTSIL  1184
             MY P S L
Sbjct  248   MYQPSSLL  255


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1631  FFREDL  1648
             F+RE+L
Sbjct  442   FYRENL  447


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8826  TSLLH  8840
             TSLLH
Sbjct  894   TSLLH  898


 Score = 16.8 bits (32),  Expect(2) = 15468
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  114  LLCD  125
            LLCD
Sbjct  919  LLCD  922


 Score = 15.5 bits (29),  Expect(2) = 15468
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  23   LSLGALWL  46
            L LG  WL
Sbjct  905  LDLGSNWL  912


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5774  RVKEKY  5791
             R+KEK+
Sbjct  129   RIKEKF  134


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4451  KPENF  4437
             KPE+F
Sbjct  146   KPEDF  150


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1525  KKGTQPEI  1548
             K G QP+I
Sbjct  171   KTGAQPQI  178


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2371  RNTTSRRVK  2397
             R TTS R K
Sbjct  308   RLTTSKRLK  316


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -2

Query  3870  TTGGRLKSLAIALQLL  3823
             TT  RLK      QLL
Sbjct  310   TTSKRLK------QLL  319


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = +3

Query  2295  TV---LNGEN**ISENLIR  2342
             TV   LN     IS  LIR
Sbjct  771   TVFCCLN-----ISNALIR  784


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6478  CSIERL  6461
             C I+RL
Sbjct  986   CNIQRL  991


 Score = 16.3 bits (31),  Expect(2) = 21811
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7390  LYRQR  7376
             LY QR
Sbjct  205   LYQQR  209


 Score = 15.1 bits (28),  Expect(2) = 21811
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7435  QIVLL  7421
             QIV L
Sbjct  177   QIVVL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1943  PLSFLVS  1923
             P SFL S
Sbjct  284   PVSFLMS  290


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -3

Query  1214  KGFLWSLSYV  1185
             KG  W + YV
Sbjct  433   KG-IWTMTYV  441


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8969  SLLQGT  8986
             SLLQ T
Sbjct  513   SLLQST  518


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3551  KLDKLL  3534
             KL KLL
Sbjct  703   KLQKLL  708


 Score = 15.5 bits (29),  Expect(2) = 26047
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  5323  LKMDKQQLLQNSYY  5282
             LK    QLL N  Y
Sbjct  315   LK----QLLKNHHY  324


 Score = 15.5 bits (29),  Expect(2) = 26047
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5246  HRYVAL  5229
             H YV L
Sbjct  322   HHYVEL  327


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  8293  ANSSTSS  8273
             A+SS SS
Sbjct  2     ADSSSSS  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6011  PQEVVL  6028
             PQ VVL
Sbjct  176   PQIVVL  181


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7667  REIN  7678
             REIN
Sbjct  219   REIN  222


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8901  CQTST  8887
             CQT T
Sbjct  393   CQTTT  397


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  178  LEIFH  164
            LE FH
Sbjct  580  LELFH  584


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5555  RTVRL  5569
             RT+RL
Sbjct  629   RTIRL  633


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 7/20 (35%)
 Frame = -2

Query  4125  LSVCIVF------TGHLPAN  4084
             LSV +VF      T  LP N
Sbjct  633   LSVTVVFEKKILKTS-LPTN  651


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3125  LDKFDMSI  3102
             LDK  M I
Sbjct  685   LDKSAMNI  692


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  6167  QCTL  6156
             QCTL
Sbjct  871   QCTL  874


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/24 (33%), Positives = 8/24 (33%), Gaps = 15/24 (62%)
 Frame = +3

Query  5250  LMGILGQEWKP**EFC---NNCCL  5312
             LMG            C   N CCL
Sbjct  936   LMG------------CVLTNACCL  947


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  7712  LQLRSVLSLC  7683
             LQ   VL LC
Sbjct  1045  LQ---VLGLC  1051


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4944  IRKALL  4961
             +RKA+L
Sbjct  193   VRKAML  198


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3119  YQEPFK  3136
             YQ+ FK
Sbjct  206   YQQRFK  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -3

Query  3092  PASVFLLLSLL  3060
             P S FL+ SLL
Sbjct  284   PVS-FLMSSLL  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2405  KSVTVLDVG  2431
             KS T LD G
Sbjct  900   KSLTHLDLG  908


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSLA  PE
Sbjct  141  KSLAGKPE  148


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3358  GRGINKL  3338
             GR IN L
Sbjct  218   GREINQL  224


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7890  LFTIES  7873
             LF I+S
Sbjct  255   LFIIDS  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  4650  KSLVKHHMYV  4679
             K L K H YV
Sbjct  316   KQLLKNHHYV  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6034  IYQYY  6020
             IYQ++
Sbjct  339   IYQFF  343


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3846  VILTCH  3863
             V LTC+
Sbjct  389   VTLTCQ  394


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3513  QIRRL  3527
             Q RRL
Sbjct  423   QLRRL  427


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3125  EPFKNLK  3145
             +PF +LK
Sbjct  506   QPFEDLK  512


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  552  EELRSL  569
            E+L SL
Sbjct  509  EDLKSL  514


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DL SL
Sbjct  509   EDLKSL  514


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7021  WEGDCVT  7001
             W+GD +T
Sbjct  653   WDGDRIT  659


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2232  KFQKLGLK  2255
             K QKL LK
Sbjct  703   KLQKLLLK  710


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1474  EAILG  1488
             EA+LG
Sbjct  117   EAVLG  121


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             V LTC
Sbjct  389   VTLTC  393


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5915  TTTLF  5929
             TT LF
Sbjct  396   TTALF  400


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8048  LRSLC  8062
             LR LC
Sbjct  424   LRRLC  428


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6248  NISTS  6262
             +ISTS
Sbjct  720   DISTS  724


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  9108  LSLGALWL  9131
             L LG  WL
Sbjct  905   LDLGSNWL  912


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2887  ELGKSDL  2907
             +LG  DL
Sbjct  963   DLGNNDL  969


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2494  RYGKCSI  2474
             RY  C I
Sbjct  982   RYPNCNI  988


>sp|P20273.2|CD22_HUMAN  RecName: Full=B-cell receptor CD22; AltName: Full=Sialic acid-binding 
Ig-like lectin 2; Short=Siglec-2; AltName: Full=T-cell 
surface antigen Leu-14; AltName: Full=B-lymphocyte cell 
adhesion molecule; Short=BL-CAM; AltName: CD_antigen=CD22; Flags: 
Precursor
Length=847

 GENE ID: 933 CD22 | CD22 molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7024  AWEGDCV  7004
             AWEG CV
Sbjct  34    AWEGACV  40


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  6995  EGSDTITLPC  7024
             EG DT+TL C
Sbjct  434   EG-DTVTLSC  442


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  888  LNLVG-WLLLIML  853
            + L G WLLL  L
Sbjct  1    MHLLGPWLLLLVL  13


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  2812  DSTAYSAARKRQ  2847
             D   YSA  KRQ
Sbjct  792   DTVTYSALHKRQ  803


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5156  WTLELL  5173
             WTLE L
Sbjct  585   WTLEVL  590


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 20/43 (46%)
 Frame = +3

Query  8517  EAQEEEEV-----------GFPVTPQ-----VPLRPMTYKAAV  8597
             E QE +EV           G+P+  Q     VP+R     AAV
Sbjct  150   EIQESQEVTLTCLLNFSCYGYPIQLQWLLEGVPMR----QAAV  188


 Score = 18.5 bits (36),  Expect(2) =  6771
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  6782  W-NNTLKQIASK  6814
             W NN   Q ASK
Sbjct  572   WVNNSIGQTASK  583


 Score = 15.9 bits (30),  Expect(2) =  6771
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6687  ESVSREDQG  6713
             +S+S ED G
Sbjct  559   DSISPEDAG  567


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6677  YCCWV  6663
             Y CWV
Sbjct  569   YSCWV  573


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  7643  HTTWMEWDREINN  7681
             H TW +W    NN
Sbjct  626   HYTWFDW----NN  634


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1535  HSQKL  1549
             HSQKL
Sbjct  640   HSQKL  644


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2214  RWKR  2225
             RWKR
Sbjct  711   RWKR  714


 Score = 17.6 bits (34),  Expect(2) = 11968
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  1474  EAILGTKER  1500
             E ILGT +R
Sbjct  399   ENILGTGQR  407


 Score = 15.5 bits (29),  Expect(2) = 11968
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1457  YHNDAERQ  1480
             YHN  E Q
Sbjct  367   YHNGKEMQ  374


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1257  QASQEV  1274
             Q SQEV
Sbjct  152   QESQEV  157


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4612  IITCHL  4595
             I+TC+L
Sbjct  216   IVTCQL  221


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5031  PSIVEIL  5011
             PS V+IL
Sbjct  333   PSTVQIL  339


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6480  PVPLNV  6463
             PV LNV
Sbjct  496   PVALNV  501


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2294  DSTKW  2308
             DS KW
Sbjct  20    DSSKW  24


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2868  CMSL  2857
             CMSL
Sbjct  353   CMSL  356


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2344  NSRLLG  2361
             N RLLG
Sbjct  546   NGRLLG  551


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5879  TVYY  5890
             TVYY
Sbjct  676   TVYY  679


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5215  LAPWL  5229
             L PWL
Sbjct  4     LGPWL  8


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7018  EGDCVT  7001
             EGD VT
Sbjct  257   EGDSVT  262


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  1409  MAGSSYSLTC  1380
             M G S  LTC
Sbjct  607   MEGKSATLTC  616


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5921  TLFCASDA  5944
             TL C SDA
Sbjct  613   TLTCESDA  620


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  459  LAPCLPIL  436
            L  CL IL
Sbjct  692  LGSCLAIL  699


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7369  LNDADG  7386
             L DADG
Sbjct  221   LQDADG  226


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1807  DLREV  1793
             +LREV
Sbjct  295   NLREV  299


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5844  NIPR  5833
             NIPR
Sbjct  771   NIPR  774


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5579  LYQSSK  5596
             LY+S K
Sbjct  76    LYESTK  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5301  NCCLSI  5318
             NC LSI
Sbjct  101   NCTLSI  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3849  ILTCHL  3866
             I TC+L
Sbjct  216   IVTCQL  221


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2756  HQKEPPFLW  2782
             H KE  F W
Sbjct  535   HPKEVQFFW  543


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6509  CTHGIRPV  6532
             CT  I PV
Sbjct  102   CTLSIHPV  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6626  VQLN  6637
             VQLN
Sbjct  234   VQLN  237


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2462  LHLRE  2448
             L LRE
Sbjct  294   LNLRE  298


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3759  ESGKY  3773
             +SGKY
Sbjct  303   QSGKY  307


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6921  TVIQ  6932
             TVIQ
Sbjct  424   TVIQ  427


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/14 (35%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +3

Query  6654  IVQDPTTIQEKESV  6695
             ++Q+P  I E + V
Sbjct  425   VIQNPMPIREGDTV  438


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  6130  YTW  6122
             YTW
Sbjct  627   YTW  629


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3542  YLALQDS  3562
             YLA  DS
Sbjct  15    YLAFSDS  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  496  DVSNRP  479
            +VS RP
Sbjct  135  NVSERP  140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4541  DIKVVP  4558
             +IKV P
Sbjct  245   EIKVTP  250


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2396  LTLRDV  2379
             L LR+V
Sbjct  294   LNLREV  299


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9128  PESSQAQI  9105
             PE S  QI
Sbjct  331   PEPSTVQI  338


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  43   PESSQAQI  20
            PE S  QI
Sbjct  331  PEPSTVQI  338


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3317  LANTLST  3297
             LAN L T
Sbjct  356   LANPLPT  362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4787  NILG  4798
             NILG
Sbjct  400   NILG  403


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1651  LPTREG  1668
             +P REG
Sbjct  430   MPIREG  435


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4742  FRSTHP  4759
             F S HP
Sbjct  531   FSSSHP  536


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5365  GEQEME  5382
             G+Q ME
Sbjct  603   GDQVME  608


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  825  FSPEVI  842
            +SPE I
Sbjct  679  YSPETI  684


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4079  LKLAGRW  4099
             LKL  RW
Sbjct  706   LKLQRRW  712


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PP DC
Sbjct  786   PPPDC  790


>ref|NP_922938.1|  C-type lectin domain family 7 member A isoform a [Homo sapiens]
Length=247

 GENE ID: 64581 CLEC7A | C-type lectin domain family 7, member A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query  2576  GIL-LVILSIPV  2544
             GIL LVIL I V
Sbjct  51    GILCLVILVIAV  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             +SQSNT
Sbjct  21    DSQSNT  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  3646  SQSNNR-AV  3669
             SQSN R AV
Sbjct  22    SQSNTRIAV  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 5/19 (26%)
 Frame = +2

Query  2729  W-GLTTPDKKHQKEPPFLW  2782
             W GL  P    Q E P LW
Sbjct  180   WIGLSRP----QTEVPWLW  194


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9017  ATPPW  9003
             A PPW
Sbjct  39    ASPPW  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7256  VAPTKA  7273
             V PTKA
Sbjct  104   VTPTKA  109


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  4612  II---TCHLFS  4589
             II    C LFS
Sbjct  125   IIYEKSCYLFS  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7586  TAVPW  7600
             T VPW
Sbjct  188   TEVPW  192


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7590  LCLGMLV  7610
             LCL  LV
Sbjct  53    LCLVILV  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  787  VLGDMA  770
            VLG MA
Sbjct  63   VLGTMA  68


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  9081  YWVSLVRP  9104
             +W+ L RP
Sbjct  179   FWIGLSRP  186


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1586  STFPTALF  1563
             STF   LF
Sbjct  198   STFSSNLF  205


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7636  NLFQ  7625
             NLFQ
Sbjct  203   NLFQ  206


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = -2

Query  312  VKIFGVLTSRRPSP  271
            VK  GVL S  P P
Sbjct  110  VKTTGVLSS--PCP  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  8831  LVTPCEPAW  8857
             L  PC P W
Sbjct  116   LSSPCPPNW  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7177  SEDLGLIV  7154
             S +LG IV
Sbjct  161   SNELGFIV  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/17 (35%), Positives = 6/17 (35%), Gaps = 10/17 (58%)
 Frame = -3

Query  7442  PSANCSAAALYQTIIVW  7392
             PS NC          VW
Sbjct  216   PSPNC----------VW  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5581  EKLDE  5567
             E LDE
Sbjct  8     ENLDE  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/23 (30%), Positives = 8/23 (34%), Gaps = 10/23 (43%)
 Frame = -3

Query  8732  PW----------CVVLLIREVAL  8694
             PW          C V L+  V L
Sbjct  42    PWRLIAVILGILCLVILVIAVVL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             LI +IL
Sbjct  45    LIAVIL  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7143  VVIATM  7160
             VV  TM
Sbjct  62    VVLGTM  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  9030  QSRPGHASLE  9001
             +S P + SLE
Sbjct  92    HSQPTQSSLE  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8331  ILSKPC  8314
             +LS PC
Sbjct  115   VLSSPC  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  30   WELSG*LGNPLLK  68
            W+    LG  LLK
Sbjct  149  WQ----LGSNLLK  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4308  WQYSSTILK  4334
             WQ  S  LK
Sbjct  149   WQLGSNLLK  157


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  9115  WELSG*LGNPLLK  9153
             W+    LG  LLK
Sbjct  149   WQ----LGSNLLK  157


>ref|NP_003845.2|  interleukin-1 receptor-like 2 precursor [Homo sapiens]
Length=575

 GENE ID: 8808 IL1RL2 | interleukin 1 receptor-like 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 20/45 (44%)
 Frame = +2

Query  6620  IIVQLNTSVEINC----TRPN--------NNT--------RKRIR  6694
             I VQL T   ++C    T  N        NNT         KRIR
Sbjct  237   IEVQLGTTLIVDCNVTDTKDNTNLRCWRVNNTLVDDYYDESKRIR  281


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3735  CSFPPI  3718
             C FPPI
Sbjct  42    CTFPPI  47


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6898  KTVRY  6884
             KTVRY
Sbjct  530   KTVRY  534


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 5/10 (50%)
 Frame = +2

Query  7649  TW-----MEW  7663
             TW     MEW
Sbjct  78    TWILFLPMEW  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2476  ILPEV  2462
             ILPEV
Sbjct  408   ILPEV  412


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2902  LTCPIQFP  2879
             LTC  +FP
Sbjct  144   LTCHLHFP  151


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8306  RIRQGLE  8326
             RIR+G E
Sbjct  279   RIREGVE  285


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1391  SLTCCHHF  1368
             SLTC  HF
Sbjct  143   SLTCHLHF  150


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2378  VFLIEL  2361
             V LIEL
Sbjct  483   VILIEL  488


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  1095  PPIPVGEI----YK  1124
             PPI  GE+    YK
Sbjct  45    PPITSGEVSVTWYK  58


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3995  LVAVHVASGYI  4027
             LVAV V   YI
Sbjct  345   LVAVAVSVVYI  355


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  993  HALDAL  976
            HA DAL
Sbjct  399  HAVDAL  404


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7900  LPNSIHYRK  7874
             +P SI+Y K
Sbjct  497   MPESIQYIK  505


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  9046  SDPAYKQLL  9072
             SD  YKQ L
Sbjct  129   SD-EYKQIL  136


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 5/16 (31%)
 Frame = +1

Query  8380  GLL*GKE*DELSQQQI  8427
             GLL  K    LS++QI
Sbjct  460   GLL--KN---LSEEQI  470


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/28 (35%), Positives = 13/28 (46%), Gaps = 12/28 (42%)
 Frame = +2

Query  2171  LTEEKI---KALVE-------ICTEMEK  2224
             L EE I    AL++       I  E+EK
Sbjct  465   LSEEQIAVYSALIQDGMKVILI--ELEK  490


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  4909  ICITLTVFQ  4935
             I + LTVF+
Sbjct  106   IHVNLTVFE  114


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1108  TGIGGL  1091
             T IGGL
Sbjct  120   TSIGGL  125


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1087  QIIHL  1101
             QI HL
Sbjct  134   QILHL  138


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  8953  RTADIELATR  8982
             RTA  EL  R
Sbjct  557   RTAGPELGSR  566


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7336  LGSSRK  7353
             LGS RK
Sbjct  563   LGSRRK  568


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5692  EYRKIL  5709
             EY  IL
Sbjct  131   EYKQIL  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -3

Query  7634  SVPEIYYS-N*HS  7599
             SVP I Y  N HS
Sbjct  225   SVPKIIYPKN-HS  236


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1996  DFYEYLI  1976
             DF  YLI
Sbjct  333   DFRAYLI  339


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  7805  LWY  7813
             LWY
Sbjct  365   LWY  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3224  TESIV  3238
             TE IV
Sbjct  374   TETIV  378


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3531  YKQFI  3545
             YK FI
Sbjct  419   YKLFI  423


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  1060  VLVVPAMSL  1034
             V VVP  SL
Sbjct  450   VIVVPE-SL  457


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2825  IVLPE  2839
             IV PE
Sbjct  451   IVVPE  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8869  RREKC  8883
             RR KC
Sbjct  566   RRKKC  570


>ref|NP_055071.2|  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 
[Homo sapiens]
Length=372

 GENE ID: 10331 B3GNT3 | UDP-GlcNAc:betaGal
beta-1,3-N-acetylglucosaminyltransferase 3 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6305  LDIIPIDN  6328
             LDI PID+
Sbjct  290   LDIFPIDD  297


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -3

Query  2402  SF--LTLRDVVFL  2370
             SF  LTL  V FL
Sbjct  181   SFFNLTLKQVLFL  193


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  2070  VNRFLP-IML  2044
             V RFLP  ML
Sbjct  343   VHRFLPYEML  352


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  1414  AL-WPGPPT  1391
             AL WP PPT
Sbjct  46    ALAWPTPPT  54


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5981  WPKHYVP  5961
             W K YVP
Sbjct  249   WSKYYVP  255


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 7/25 (28%)
 Frame = +2

Query  8084  RDLLLIVTRIV--E-LLGRRGWEAL  8149
             RDLLL V R    E LL    W+AL
Sbjct  338   RDLLL-VHRFLPYEMLL---MWDAL  358


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = -1

Query  250  KPSPAS---RELL---W  218
            K SP     RELL   W
Sbjct  114  KSSPSNYVRRELLRRTW  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3984  PSKCVQ  3967
             PSKC Q
Sbjct  100   PSKCAQ  105


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3083  VFLLL  3069
             VFLLL
Sbjct  107   VFLLL  111


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 8/18 (44%)
 Frame = +2

Query  6875  PEIVTHSFN------CGG  6910
             PE+VT+  N      CGG
Sbjct  255   PEVVTQ--NERYPPYCGG  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7745  LVHSFL  7728
             LVH FL
Sbjct  342   LVHRFL  347


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  5716  RKIDRLID  5739
             RK++RL +
Sbjct  157   RKVNRLLE  164


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4473  GFLLS  4459
             GFLLS
Sbjct  272   GFLLS  276


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3339  SHSGI  3325
             SHSGI
Sbjct  313   SHSGI  317


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4830  PNASLFL  4810
             PNA L L
Sbjct  9     PNATLIL  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1727  PEALFW  1710
             PEAL W
Sbjct  44    PEALAW  49


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  4721  FIVMSIKPSPS  4689
             F  + IK SPS
Sbjct  108   FLLLVIKSSPS  118


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1073  LFLKGTSS  1050
             LFL GT S
Sbjct  144   LFLVGTAS  151


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2414  LLIFSFL  2394
             LL FS L
Sbjct  22    LLLFSLL  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1781  FLVYR  1767
             FL YR
Sbjct  83    FLLYR  87


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +2

Query  2327  RELNKRTQDFW  2359
             REL  RT   W
Sbjct  123   RELLRRT---W  130


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  337  WVRER  351
            W RER
Sbjct  130  WGRER  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  101  YLKHSR  84
            YL H R
Sbjct  3    YLRHRR  8


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3441  SLLAAPST  3418
             SLL  P T
Sbjct  26    SLLVSPPT  33


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8890  HSNTSL  8873
             H NTS+
Sbjct  62    HANTSM  67


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5484  NLAMKATLF  5458
             NL +K  LF
Sbjct  184   NLTLKQVLF  192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1592  RTPNERL  1612
             R P +RL
Sbjct  323   RAPSQRL  329


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8033  LIWDDL  8050
             L WD L
Sbjct  353   LMWDAL  358


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  517  WDSYNHP  537
            WD  N+P
Sbjct  355  WDALNQP  361


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -2

Query  9042  LA--TPQSRP  9019
             LA  TP  RP
Sbjct  47    LAWPTPPTRP  56


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1952  LQFPLSFLV  1926
             LQ  L FLV
Sbjct  139   LQLRLLFLV  147


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  5294  LQQLLFIHFQ  5323
             L Q LF + Q
Sbjct  187   LKQVLFLQWQ  196


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1207  SFGPC  1193
             SF PC
Sbjct  331   SFDPC  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2417  LLLIFSFL  2394
             LLL+  FL
Sbjct  340   LLLVHRFL  347


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4696  DGFIDITMK  4722
             D F + T+K
Sbjct  180   DSFFNLTLK  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6990  TLKEV  7004
             TLK+V
Sbjct  186   TLKQV  190


>ref|NP_067009.1|  zona pellucida sperm-binding protein 4 preproprotein [Homo sapiens]
Length=540

 GENE ID: 57829 ZP4 | zona pellucida glycoprotein 4 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -3

Query  1067  LKGTSSSCYVT  1035
             L  T SSCYVT
Sbjct  87    LEATYSSCYVT  97


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5136  CGPWS  5122
             CGPWS
Sbjct  34    CGPWS  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 8/25 (32%)
 Frame = -1

Query  9058  MQDLRARHSP-------VPPRPRLP  9005
             M DL AR  P       +P R RLP
Sbjct  130   M-DLLARDAPDTDWCDSIPARDRLP  153


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  994   QGLLHQ  1011
             QGLLH+
Sbjct  61    QGLLHE  66


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -1

Query  5380  PFLALL---CRVTP  5348
             P+L LL   C  TP
Sbjct  358   PYLGLLLQQCWATP  371


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 12/27 (44%)
 Frame = -3

Query  272  LLPCALQQAESCVERAPLVSLSL--SG  198
            LL C L     C      VSLSL  SG
Sbjct  3    LLRCVLL----C------VSLSLAVSG  19


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3324  QVACQYSV  3301
             +V C YSV
Sbjct  282   HVSCSYSV  289


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6718  CSPWS  6704
             C PWS
Sbjct  34    CGPWS  38


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  765  HQAISPRTLNAW  800
            ++A SP  L AW
Sbjct  47   QEATSPPVLIAW  58


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8909  SISSRGP  8929
             S+SS GP
Sbjct  478   SVSSKGP  484


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4364  LHCT  4353
             LHCT
Sbjct  187   LHCT  190


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             L+SYL
Sbjct  522   LVSYL  526


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  172  SLAVAPEQGPE  204
            SLAV  ++ PE
Sbjct  14   SLAVSGQHKPE  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8311  YSSRYV  8294
             YSS YV
Sbjct  91    YSSCYV  96


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = -3

Query  4790  CCYYQSS  4770
             CCY  SS
Sbjct  169   CCY--SS  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7004  DTITLPC  7024
             +T+TL C
Sbjct  183   NTVTLHC  189


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  5822  GTMLLGMLMI  5851
             GT+ LG L++
Sbjct  514   GTLILGALLV  523


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3477  LLVTY  3463
             LLV Y
Sbjct  521   LLVSY  525


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1737  ETTTPP  1754
             E T PP
Sbjct  48    EATSPP  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1491  QRKIVKC  1511
             +RK  KC
Sbjct  122   ERKLLKC  128


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4545  MSLLSCI  4525
             M LL C+
Sbjct  1     MWLLRCV  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1695  EPTAPP  1712
             E T PP
Sbjct  48    EATSPP  53


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7127  LLTRD  7141
             LL RD
Sbjct  132   LLARD  136


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3930  PCMASPFS  3907
             PC  SP S
Sbjct  153   PCAPSPIS  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6906  EGNFS  6920
             EG FS
Sbjct  192   EGHFS  196


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6527  PVVSTQ  6544
             PV  TQ
Sbjct  225   PVMATQ  230


>pdb|1I8L|A  Chain A, Human B7-1CTLA-4 Co-Stimulatory Complex
 pdb|1I8L|B  Chain B, Human B7-1CTLA-4 Co-Stimulatory Complex
Length=208


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1644  IWPSYKGR  1667
             IWP YK R
Sbjct  49    IWPEYKNR  56


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5394  RIYW  5383
             RIYW
Sbjct  29    RIYW  32


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1505  NNLSLV  1488
             NNLS V
Sbjct  63    NNLSIV  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  579  VATLYCVH  602
            VATL C H
Sbjct  11   VATLSCGH  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  482  PVRNIRR  502
            P  NIRR
Sbjct  119  PTSNIRR  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  158  VSVENL  175
            VSVE L
Sbjct  20   VSVEEL  25


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1100  RWIIC  1086
             R IIC
Sbjct  124   RRIIC  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3231  LSVVI  3217
             LS+VI
Sbjct  65    LSIVI  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  193  QGPESE  210
            Q PE E
Sbjct  157  QDPETE  162


>ref|NP_001552.2|  tumor necrosis factor receptor superfamily member 9 precursor 
[Homo sapiens]
Length=255

 GENE ID: 3604 TNFRSF9 | tumor necrosis factor receptor superfamily, member 9
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -3

Query  2417  LLLIFSFLTLR  2385
             L L F FLTLR
Sbjct  200   LFLLF-FLTLR  209


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  570  YNTVATL  590
            YN VATL
Sbjct  6    YNIVATL  12


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5455  CKKCCF  5472
             CK CCF
Sbjct  117   CKDCCF  122


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7863  FLLYFL  7880
             FLL+FL
Sbjct  201   FLLFFL  206


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1161  FLLFYL  1144
             FLLF+L
Sbjct  201   FLLFFL  206


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  535  DGCSC  521
            DGCSC
Sbjct  239  DGCSC  243


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  6718  CSPWS--SLD  6695
             C PW   SLD
Sbjct  133   CRPWTNCSLD  142


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  420  IFSFPLALT  394
            I SF LALT
Sbjct  187  IISFFLALT  195


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7070  LLFLL  7056
             LLFLL
Sbjct  199   LLFLL  203


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = -1

Query  3817  FLMFILGLIYSI  3782
             FL+F L L +S+
Sbjct  201   FLLFFLTLRFSV  212


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 13/36 (36%), Positives = 13/36 (36%), Gaps = 20/36 (55%)
 Frame = -2

Query  501  LLMFLTGQD*LRI-VLAPCLPILYV------LIYIF  415
            LL FLT    LR  V         V      L YIF
Sbjct  202  LLFFLT----LRFSV---------VKRGRKKLLYIF  224


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6063  FFHMLKFSV  6037
             FF  L FSV
Sbjct  204   FFLTLRFSV  212


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/20 (45%), Positives = 12/20 (60%), Gaps = 4/20 (20%)
 Frame = +2

Query  3941  CSPGIWQLDCTHLEGKVILV  4000
             C P  W  +C  L+GK +LV
Sbjct  133   CRP--WT-NCS-LDGKSVLV  148


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8173  VLESGTKE  8196
             VL  GTKE
Sbjct  146   VLVNGTKE  153


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2764  FLMFF  2750
             FL+FF
Sbjct  201   FLLFF  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6828  NCSLN  6814
             NCSL+
Sbjct  138   NCSLD  142


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  828  SPEVIPMFSAL  860
            SP++I  F AL
Sbjct  184  SPQIISFFLAL  194


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3971  YNLVAIFL  3948
             YN VA  L
Sbjct  6     YNIVATLL  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3938  DCSPG  3952
             DC PG
Sbjct  87    DCTPG  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = +2

Query  6524  RPVVSTQLLLNGSLAEEE  6577
             RPV  TQ        EE+
Sbjct  230   RPVQTTQ--------EED  239


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2796  SILING  2813
             S+L+NG
Sbjct  145   SVLVNG  150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1579  FQQPF  1565
             F QPF
Sbjct  224   FKQPF  228


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8283  LQAPC  8269
             LQ PC
Sbjct  24    LQDPC  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3467  VTNRGRQK  3490
             V  RGR K
Sbjct  212   VVKRGRKK  219


>ref|NP_002278.1|  leukocyte-associated immunoglobulin-like receptor 1 isoform a 
precursor [Homo sapiens]
Length=287

 GENE ID: 3903 LAIR1 | leukocyte-associated immunoglobulin-like receptor 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 4/17 (23%)
 Frame = +3

Query  4725  PHPRISSE---VHIPLG  4766
             P P IS E   V IPLG
Sbjct  27    PRPSISAEPGTV-IPLG  42


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -3

Query  5123  LLGLVPSILC  5094
             LLGLV   LC
Sbjct  8     LLGLV---LC  14


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2831  LPEKD  2845
             LPEKD
Sbjct  229   LPEKD  233


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  199  PESERET  219
            PE +RET
Sbjct  230  PEKDRET  236


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7550  PGAVDPLG  7527
             PG V PLG
Sbjct  35    PGTVIPLG  42


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  25   EPGSS  39
            EPGSS
Sbjct  133  EPGSS  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9110  EPGSS  9124
             EPGSS
Sbjct  133   EPGSS  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = +1

Query  2479  CIYHT*YK  2502
             CIY   YK
Sbjct  101   CIY---YK  105


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1767  APASEG  1750
             APAS+G
Sbjct  153   APASQG  158


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6792  VLFHFALLML  6763
             V F F LL+L
Sbjct  172   VVFLFCLLLL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  588  LYCVHQRIEIK  620
            L+C H   +IK
Sbjct  183  LFCLHRQNQIK  193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +1

Query  4477  LERTS-KA  4497
             LERT  KA
Sbjct  217   LERTADKA  224


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6413  WELAQR  6396
             W L QR
Sbjct  257   WALTQR  262


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -2

Query  528  VAVPVFVYSLLM  493
            V V VF + LL+
Sbjct  170  VSV-VFLFCLLL  180


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4109  TIHT  4120
             TIHT
Sbjct  18    TIHT  21


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3044  VYYDPSK  3064
             +YY P K
Sbjct  102   IYYKPPK  108


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  7820  LFIMIVGGLVGLRIVF  7867
             L+I+I     G  +VF
Sbjct  164   LYILI-----GVSVVF  174


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  9104  WSNQRD  9087
             WS Q D
Sbjct  109   WSEQSD  114


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  19   WSNQRD  2
            WS Q D
Sbjct  109  WSEQSD  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5985  CVAQT  5971
             C AQT
Sbjct  14    CLAQT  18


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5249  TYGDT  5263
             TY DT
Sbjct  67    TYNDT  71


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 10/22 (45%)
 Frame = +1

Query  6697  PERTRESICYNRKNRKYETSTL  6762
             PE  RE           +TS L
Sbjct  230   PEKDRET----------DTSAL  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1263  SQEV  1274
             SQEV
Sbjct  246   SQEV  249


>emb|CAD32736.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=122


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  5885  YYGVPVWKEATT  5920
             YYG  VW + TT
Sbjct  106   YYGMHVWGQGTT  117


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G +TFY D
Sbjct  55    GVDTFYAD  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6634  QLYYYG  6617
             Q YYYG
Sbjct  103   QYYYYG  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6523  NSMCTLY  6503
             NSM TLY
Sbjct  74    NSMQTLY  80


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/37 (32%), Positives = 12/37 (32%), Gaps = 20/37 (54%)
 Frame = -1

Query  3943  TVYLSMHGFSF*LTFI----TAGYYFFC-------YY  3866
             T YL M G            TA YY  C       YY
Sbjct  78    TLYLQMNG-------LRDDDTAVYY--CAKGGLGQYY  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4850  FYGDS  4836
             FY DS
Sbjct  59    FYADS  63


>sp|P30488.1|1B50_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-50 alpha 
chain; AltName: Full=MHC class I antigen B*50; AltName: 
Full=Bw-50; AltName: Full=HLA class I histocompatibility antigen, 
B-21 alpha chain; Flags: Precursor
Length=362


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4173  RESSRNL  4193
             RES RNL
Sbjct  99    RESLRNL  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7073  TLLFLLSA  7050
             T L LLSA
Sbjct  8     TVLLLLSA  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7174  QTWRRRY  7194
             +TW R Y
Sbjct  117   HTWQRMY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL   LA
Sbjct  11    LLLSAALA  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  3113  QIYQEPFKNL  3142
             Q Y E   NL
Sbjct  96    QTYRESLRNL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 9/21 (42%)
 Frame = +2

Query  4421  QITKI--Q-------NFRVYY  4456
             QI K   Q       N R YY
Sbjct  89    QISKTNTQTYRESLRNLRGYY  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  183   YLEGLC  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


>ref|NP_006842.2|  glioma pathogenesis-related protein 1 precursor [Homo sapiens]
 sp|P48060.3|GLIP1_HUMAN  RecName: Full=Glioma pathogenesis-related protein 1; Short=GliPR 
1; AltName: Full=Protein RTVP-1; Flags: Precursor
Length=266

 GENE ID: 11010 GLIPR1 | GLI pathogenesis-related 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 6/23 (26%)
 Frame = -1

Query  4663  FTKLFHVL---ILILSTCHTIIT  4604
             +T LF +    ILILS    IIT
Sbjct  233   YTSLFLIVNSVILILS---VIIT  252


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 10/21 (47%)
 Frame = -2

Query  5475  MKATLFTIAIGTSSFRLTSWM  5413
             M  TL TIA          WM
Sbjct  1     MRVTLATIA----------WM  11


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 11/29 (37%)
 Frame = -3

Query  3086  SVFLLLS----LLMGH---NTLHVLVLLE  3021
             SV L LS     L  H   N    LVLL+
Sbjct  242   SVILILSVIITILVQHKYPN----LVLLD  266


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1111  EKFIKD  1128
             E FIKD
Sbjct  31    EDFIKD  36


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8761  PKVSGY  8744
             PKVSG+
Sbjct  157   PKVSGF  162


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  7676  NNYTSLIHSLI  7708
             N YTSL   LI
Sbjct  231   NRYTSLF--LI  239


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 2/12 (16%)
 Frame = +2

Query  593  LCASKDRD--KR  622
            LC    RD  KR
Sbjct  205  LCVNRQRDQVKR  216


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  871  PPHK  882
            PPHK
Sbjct  85   PPHK  88


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  6063  MTW  6071
             MTW
Sbjct  58    MTW  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2552  WKGSPAIF  2575
             W GS  IF
Sbjct  101   WTGSVPIF  108


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6893  CALQF  6879
             CA QF
Sbjct  151   CAVQF  155


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5234  ALSHGA  5217
             ALS GA
Sbjct  164   ALSNGA  169


 Score = 15.5 bits (29),  Expect(2) = 47513
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4821  SLFL  4810
             SLFL
Sbjct  235   SLFL  238


 Score = 15.5 bits (29),  Expect(2) = 47513
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4797  PNMLLL  4780
             PN+ LL
Sbjct  260   PNLVLL  265


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6782  WNNTLKQIA  6808
             W+  L QIA
Sbjct  60    WDPALAQIA  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3231  LSVVI  3217
             LSV+I
Sbjct  247   LSVII  251


>ref|NP_612403.2|  heterogeneous nuclear ribonucleoprotein L-like isoform 1 [Homo 
sapiens]
 sp|Q8WVV9.1|HNRLL_HUMAN  RecName: Full=Heterogeneous nuclear ribonucleoprotein L-like; 
Short=hnRNPLL; AltName: Full=Stromal RNA-regulating factor
Length=542

 GENE ID: 92906 HNRPLL | heterogeneous nuclear ribonucleoprotein L-like
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = +1

Query  5794  ALVEMG----VE  5817
             ALVEMG    VE
Sbjct  375   ALVEMGDEYAVE  386


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1235  EPVYI  1221
             EPVYI
Sbjct  134   EPVYI  138


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 9/22 (40%)
 Frame = +2

Query  608  DRDK---R------HQGSFRQD  646
            DR K   R      H  SFR+D
Sbjct  268  DRGKGRQRQAILGEHPSSFRHD  289


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  2438  YFSVPL---DEDFRK  2473
             Y+ VPL   +E F K
Sbjct  458   YYNVPLCVTEETFTK  472


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1471  REAILG  1488
             R+AILG
Sbjct  275   RQAILG  280


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7596  GTAVVQM  7576
             GTA V+M
Sbjct  373   GTALVEM  379


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2617  LFSKRL  2600
             LF KRL
Sbjct  397   LFGKRL  402


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7801  ICYV  7790
             ICYV
Sbjct  102   ICYV  105


 Score = 16.8 bits (32),  Expect(2) = 17090
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6140  PLCV  6151
             PLCV
Sbjct  462   PLCV  465


 Score = 15.9 bits (30),  Expect(2) = 17090
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6044  NFNMWKND  6067
             +F M KN+
Sbjct  429   DFAMSKNN  436


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6305  LDIIPIDND  6331
             L++I  DND
Sbjct  247   LNVIRNDND  255


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  638  RQDRGRAKQ  664
            R DRG   Q
Sbjct  266  RRDRGKGRQ  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7045  VYNLF  7031
             V+NLF
Sbjct  352   VFNLF  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1429  SAKTL  1415
             SAKTL
Sbjct  493   SAKTL  497


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5200  SNSFILKL  5177
             SN + LKL
Sbjct  527   SNPYTLKL  534


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5808  GGGDG  5822
             GGGDG
Sbjct  49    GGGDG  53


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3427  PIYIEG  3410
             P+YI G
Sbjct  135   PVYIAG  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  1761  QEPIDKELYPLT  1796
             Q P    LYP T
Sbjct  174   QNP----LYPIT  181


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  872  HPTRFKH  892
            HP  F H
Sbjct  282  HPSSFRH  288


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5885  YYGVP  5899
             YY VP
Sbjct  458   YYNVP  462


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8015  LIEWIC  7998
             L EW C
Sbjct  500   LLEWEC  505


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4573  LCFS  4562
             LCFS
Sbjct  534   LCFS  537


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5354  YSTEE  5368
             YS EE
Sbjct  34    YSAEE  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3128  ALDKF  3114
             AL+KF
Sbjct  95    ALEKF  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 11/21 (52%)
 Frame = +1

Query  1573  VGNVERKDTK*KIVLRDRLIF  1635
             VG V+R      IV     IF
Sbjct  192   VGKVQR------IV-----IF  201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3474  LVTYP  3460
             LV YP
Sbjct  314   LVAYP  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7687  CVIVNFSVPL  7658
             CV   + VPL
Sbjct  454   CVLHYYNVPL  463


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8612  FKRKG  8626
             FKR G
Sbjct  201   FKRNG  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8702  VALCV  8688
             V LCV
Sbjct  461   VPLCV  465


>emb|CAB51727.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=127


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
 Frame = -1

Query  6280  LHLTSYACADIERAVFY  6230
             LHLTS   AD   AVF+
Sbjct  80    LHLTSVTAADT--AVFF  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  2217  ISVQISTNAF  2188
             ISV  S N F
Sbjct  69    ISVDTSKNQF  78


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5107  HLSSV  5093
             HL SV
Sbjct  81    HLTSV  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1378  VIISS  1364
             VI+SS
Sbjct  118   VIVSS  122


>sp|O00206.2|TLR4_HUMAN  RecName: Full=Toll-like receptor 4; AltName: Full=hToll; AltName: 
CD_antigen=CD284; Flags: Precursor
Length=839

 GENE ID: 7099 TLR4 | toll-like receptor 4 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/13 (53%), Positives = 10/13 (76%), Gaps = 1/13 (7%)
 Frame = -3

Query  2405  FS-FLTLRDVVFL  2370
             FS FL LR+ ++L
Sbjct  440   FSVFLSLRNLIYL  452


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  6041  LSHLPILLLVG  6009
             LSHL  L L G
Sbjct  101   LSHLSTLILTG  111


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8954  LEVLRM  8937
             LEVL M
Sbjct  473   LEVLKM  478


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8940  PEYFKN  8957
             PEYF N
Sbjct  168   PEYFSN  173


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8873  LRVIHPM  8853
             LRV H M
Sbjct  195   LRVLHQM  201


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  7189  RYEGQLEK  7212
             R EG LEK
Sbjct  264   RNEGNLEK  271


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3125  LDKFDMS  3105
             L+KFD S
Sbjct  269   LEKFDKS  275


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1290  LSSNFL  1273
             +SSNFL
Sbjct  414   MSSNFL  419


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3821  DISHVH  3804
             DISH H
Sbjct  453   DISHTH  458


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4643  NMEKFSK  4663
             N+EKF K
Sbjct  268   NLEKFDK  274


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -2

Query  432  VLIYIFSFPLAL  397
            VL+Y F F L L
Sbjct  649  VLVYKFYFHLML  660


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5977  PNIMYLC  5957
             PNI Y C
Sbjct  34    PNITYQC  40


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3990  TFPSKCVQS  3964
             TFP KC  S
Sbjct  537   TFPYKCLNS  545


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 3/18 (16%)
 Frame = +3

Query  420  YKLKHIVWASR--ELERF  467
            Y L HI   S   EL+ F
Sbjct  551  YSLNHIM-TSKKQELQHF  567


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3179  CGHPSFLH  3156
             C H SFL+
Sbjct  585   CEHQSFLQ  592


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4947  RKALL  4961
             RKALL
Sbjct  812   RKALL  816


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  4585  IPNDLCFS  4562
             IP++L FS
Sbjct  48    IPDNLPFS  55


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             KLV VE
Sbjct  130   KLVAVE  135


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  155  LVSVE-NL  175
            LV VE NL
Sbjct  131  LVAVETNL  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +1

Query  7681  LHKLNTL  7701
             LHKL TL
Sbjct  228   LHKL-TL  233


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 9/26 (34%)
 Frame = -1

Query  7060  YFLPHVYNLFYSAWEGDC---VTSFS  6992
             Y+L  + +LF      +C   V SFS
Sbjct  295   YYLDDIIDLF------NCLTNVSSFS  314


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/18 (38%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = -1

Query  7498  EL-----LDAPDCELQQM  7460
             EL     LD   C+L+Q+
Sbjct  494   ELRNLTFLDLSQCQLEQL  511


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6839  YYFQIVLL  6816
             +YF+  LL
Sbjct  654   FYFHLMLL  661


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 6/25 (24%)
 Frame = -2

Query  8802  LSYLAQLVLACSTIQRSVDI*PLAL  8728
             LS L  L+L    IQ       LAL
Sbjct  101   LSHLSTLILTGNPIQ------SLAL  119


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  224  PLVSLSL  204
            PL  LSL
Sbjct  202  PLLNLSL  208


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3343  KLPLRN  3326
             KL LRN
Sbjct  230   KLTLRN  235


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  2786  PS-K-GMEVLS  2760
             PS K GM VLS
Sbjct  612   PSDKQGMPVLS  622


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5175  RSLRMKLLD  5201
             R LR  LLD
Sbjct  809   RRLRKALLD  817


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3757  WNQESTI  3777
             WN E T+
Sbjct  821   WNPEGTV  827


 Score = 15.9 bits (30),  Expect(2) = 28999
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  2408  IFSFLT-LRDVVFL  2370
             IF   T LR+  FL
Sbjct  491   IF---TELRNLTFL  501


 Score = 15.1 bits (28),  Expect(2) = 28999
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2473  LPEVF  2459
             LP++F
Sbjct  488   LPDIF  492


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  1415  CLMAGSSYSL  1386
             CL   SS+SL
Sbjct  306   CLTNVSSFSL  315


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/21 (33%), Positives = 9/21 (42%), Gaps = 10/21 (47%)
 Frame = -1

Query  6754  LSHISYFSYCNKCSPWSSLDT  6692
             +SH  +F          SLDT
Sbjct  527   MSHNNFF----------SLDT  537


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2620  SRHSYL  2637
             SR  YL
Sbjct  790   SRNTYL  795


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5903  WKEAT  5917
             W EAT
Sbjct  833   WQEAT  837


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +3

Query  2733  DLPHQTKNIRKNLHSF  2780
             +LP  TKN   +L SF
Sbjct  51    NLPFSTKNL--DL-SF  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1476  GNFRNQ  1493
             G FRN+
Sbjct  261   GEFRNE  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8664  DILDL  8678
             DI DL
Sbjct  299   DIIDL  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3050  NTLHVL  3033
             N L+VL
Sbjct  544   NSLQVL  549


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1382  MSGSR  1396
             MS SR
Sbjct  2     MSASR  6


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8332  NPFQAL  8315
             NP Q L
Sbjct  112   NPIQSL  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2867  QKLV  2878
             QKLV
Sbjct  129   QKLV  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2699  IEELR  2713
             IEE R
Sbjct  285   IEEFR  289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6199  TTIGISI  6179
             T IG+S+
Sbjct  632   TIIGVSV  638


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2520  IPGV  2509
             IPGV
Sbjct  713   IPGV  716


>sp|Q99436.1|PSB7_HUMAN  RecName: Full=Proteasome subunit beta type-7; AltName: Full=Proteasome 
subunit Z; AltName: Full=Macropain chain Z; AltName: 
Full=Multicatalytic endopeptidase complex chain Z; Flags: 
Precursor
Length=277

 GENE ID: 5695 PSMB7 | proteasome (prosome, macropain) subunit, beta type, 7
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 14/40 (35%)
 Frame = +3

Query  5940  MLKHMI---QRYI----------MFGPHM-PVYPQTPTHK  6017
             MLK+M    Q YI            GPH+  +YP+  T K
Sbjct  125   MLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDK  164


 Score = 22.3 bits (45),  Expect =   731
 Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 20/45 (44%)
 Frame = +3

Query  4125  MAAISPVLRLGPPVGG------RESSRN--LE--FP----TIPKV  4217
             MAA+S V    PPVGG      R   RN  LE  F       PKV
Sbjct  1     MAAVS-V--YAPPVGGFSFDNCR---RNAVLEADFAKRGYKLPKV  39


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  540  EGMVVA  523
            EGMVVA
Sbjct  65   EGMVVA  70


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7073  YAPPISG  7093
             YAPP+ G
Sbjct  7     YAPPVGG  13


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6232  KKLLFQYQ  6255
             K +LF YQ
Sbjct  127   KQMLFRYQ  134


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5288  RILQQLLF  5311
             R L Q+LF
Sbjct  124   RMLKQMLF  131


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1908  LISSN  1894
             LISSN
Sbjct  101   LISSN  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7471  LQQMLLR  7451
             L QML R
Sbjct  126   LKQMLFR  132


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2719  MLSQLLY  2699
             ML Q+L+
Sbjct  125   MLKQMLF  131


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -3

Query  6092  YPHASV--LP  6069
             YPH S   LP
Sbjct  157   YPHGSTDKLP  166


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8526  EEEE  8537
             EEEE
Sbjct  190   EEEE  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1047  GTTSTLQEQI  1076
             GTT  L E I
Sbjct  250   GTTAVLTEKI  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4029  KQKLF  4043
             KQ LF
Sbjct  127   KQMLF  131


>sp|P30487.2|1B49_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-49 alpha 
chain; AltName: Full=MHC class I antigen B*49; AltName: 
Full=HLA class I histocompatibility antigen, B-21 alpha chain; 
Flags: Precursor
Length=362

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7073  TLLFLLSA  7050
             T L LLSA
Sbjct  8     TVLLLLSA  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  2096  ENLK-----CNQSE  2070
             ENL       NQSE
Sbjct  100   ENLRIALRYYNQSE  113


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7174  QTWRRRY  7194
             +TW R Y
Sbjct  117   HTWQRMY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL   LA
Sbjct  11    LLLSAALA  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  183   YLEGLC  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


>ref|NP_003255.2|  toll-like receptor 2 precursor [Homo sapiens]
 sp|O60603.1|TLR2_HUMAN  RecName: Full=Toll-like receptor 2; AltName: Full=Toll/interleukin-1 
receptor-like protein 4; AltName: CD_antigen=CD282; 
Flags: Precursor
Length=784

 GENE ID: 7097 TLR2 | toll-like receptor 2 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 14/33 (42%), Positives = 14/33 (42%), Gaps = 15/33 (45%)
 Frame = -1

Query  4240  IHRFY--------YSLT-----LGIVGNSK-FL  4184
             I RFY        YSLT        V NSK FL
Sbjct  319   IPRFYLFYDLSTLYSLTERVKRI-TVENSKVFL  350


 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8491  LPMLLV  8508
             LPMLLV
Sbjct  498   LPMLLV  503


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -2

Query  2061  FLPIMLTGV  2035
             FL I+LTGV
Sbjct  599   FLLILLTGV  607


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +3

Query  5181  LRMK----LLDIF  5207
             L MK    LL+IF
Sbjct  205   LHMKQHILLLEIF  217


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 12/26 (46%)
 Frame = +2

Query  8249  DRVI-----EVVQGACRAIR--HIPR  8305
             DRVI     E        IR  HIPR
Sbjct  301   DRVIDPGKVETL-----TIRRLHIPR  321


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6137  LILHM  6123
             LILHM
Sbjct  203   LILHM  207


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1525  LPQLKHLTI  1499
             LPQLK L I
Sbjct  476   LPQLKELYI  484


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7643  HTTWMEW  7663
             HT WM W
Sbjct  3     HTLWMVW  9


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4267  LSYNFL  4250
             LSYN+L
Sbjct  107   LSYNYL  112


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = +2

Query  2063  LLTQIG---------CTLN  2092
             LL QI          CTLN
Sbjct  272   LLNQISGLLELEFDDCTLN  290


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  3197  LTEAVQKITTE  3229
             LTE V  IT E
Sbjct  334   LTERVKRITVE  344


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8756  LWMV  8767
             LWMV
Sbjct  5     LWMV  8


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             LP++LVL
Sbjct  498   LPMLLVL  504


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN AS SC
Sbjct  23    SNQASLSC  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3209  LPLLIVL  3189
             LP+L VL
Sbjct  498   LPMLLVL  504


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8859  MDDPERE  8879
             MD+ +RE
Sbjct  766   MDEAQRE  772


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5016  SLQYLAL  5036
             SL+YL L
Sbjct  361   SLEYLDL  367


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  2325  SENLIRE--LKTS  2357
             SENL  E  LK S
Sbjct  368   SENLMVEEYLKNS  380


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +3

Query  1281  WMTETLLVQ---NANP  1319
             W  E L+VQ   N NP
Sbjct  654   WV-ENLMVQELENFNP  668


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  155  KGSEGSL  135
            KGS GSL
Sbjct  37   KGSSGSL  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4643  NMEKFSK  4663
             NM+ F K
Sbjct  158   NMDTFTK  164


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5572  QASLS  5586
             QASLS
Sbjct  25    QASLS  29


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3038  VLVLLE  3021
             +L+LLE
Sbjct  733   ILILLE  738


 Score = 16.3 bits (31),  Expect(2) = 25254
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 2/22 (9%)
 Frame = -1

Query  7501  LELLDAPDCELQQMLLRLNSPQ  7436
             LE LD  +  L   L  LN PQ
Sbjct  459   LEILDVSNNNLN--LFSLNLPQ  478


 Score = 15.1 bits (28),  Expect(2) = 25254
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7524  LSTARI  7507
             LS  RI
Sbjct  443   LSSTRI  448


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4220  GVVESMNKE  4246
             GV+ S+ KE
Sbjct  12    GVIISLSKE  20


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 9/24 (37%)
 Frame = -1

Query  8395  SLT----VGHPI-TL----LFDHL  8351
             SLT     G P  TL    LF HL
Sbjct  125   SLTFLNLLGNPYKTLGETSLFSHL  148


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2255  NPYNT  2269
             NPY T
Sbjct  134   NPYKT  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4510  TFPEEL  4493
             TF EEL
Sbjct  174   TFLEEL  179


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1198  PCLMS  1184
             PCL+S
Sbjct  352   PCLLS  356


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5563  QTHQASLSK  5589
             Q H ASL K
Sbjct  396   QNHLASLEK  404


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3683  KVYLAW  3700
             K YL W
Sbjct  759   KTYLEW  764


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -2

Query  6942  NS----CVELQ  6922
             NS    CV LQ
Sbjct  69    NSDLQRCVNLQ  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  3753  LTNLSTCSFPP  3721
             L NLS   F P
Sbjct  112   LSNLSSSWFKP  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4551  TFMSLL  4534
             TF+ LL
Sbjct  127   TFLNLL  132


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = -2

Query  3243  HITMLSVVIFC--TASVNC  3193
             HI +L   IF   T SV C
Sbjct  210   HILLLE--IFVDVTSSVEC  226


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3215  KITTES  3232
             KIT ES
Sbjct  260   KITDES  265


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +3

Query  8943  EYFKNC*HRAC  8975
             EY KN    AC
Sbjct  375   EYLKN---SAC  382


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2465  SLHLRELK  2442
             SL L +LK
Sbjct  473   SLNLPQLK  480


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6047  NFLSHL  6030
             N+LS L
Sbjct  110   NYLSNL  115


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5725  DRLID  5739
             DR ID
Sbjct  301   DRVID  305


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  860  IRRSHPTRF  886
            IRR H  RF
Sbjct  314  IRRLHIPRF  322


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5114  LVPSILCQ  5091
             LVP  L Q
Sbjct  350   LVPCLLSQ  357


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  923  CLMSPH  906
            CL+S H
Sbjct  353  CLLSQH  358


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  101  YLKHS  87
            YLK S
Sbjct  376  YLKNS  380


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4730  SKNKFRS  4750
             SKN F S
Sbjct  421   SKNSFHS  427


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  501  LLMFLTG  481
            LL  LTG
Sbjct  600  LLILLTG  606


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7422  SRTIC  7436
             SR IC
Sbjct  636   SRNIC  640


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  810  VEEKAFS  830
            +EE  FS
Sbjct  91   IEEDSFS  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7438  QQIVLL  7421
             Q+I LL
Sbjct  209   QHILLL  214


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7617  LLQLAF  7600
             LL+L F
Sbjct  279   LLELEF  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7925  SETIMV  7908
             SE  MV
Sbjct  368   SENLMV  373


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6709  WSSLDT  6692
             W SL T
Sbjct  386   WPSLQT  391


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4081  KISR  4092
             KISR
Sbjct  505   KISR  508


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7011  SPSH  7022
             SPSH
Sbjct  566   SPSH  569


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/7 (42%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  836  FWAESLL  816
            +W E L+
Sbjct  653  YWVENLM  659


>ref|NP_036274.3|  cyclin-D1-binding protein 1 isoform 1 [Homo sapiens]
Length=360

 GENE ID: 23582 CCNDBP1 | cyclin D-type binding-protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -3

Query  4496  ALLVLSK-VDF  4467
             ALL L K VDF
Sbjct  173   ALLMLTKNVDF  183


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  7581  QMSFPEQPQIPR  7546
             QM     PQIPR
Sbjct  161   QM-----PQIPR  167


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  61   CLSL---NKACL  87
            CL L    KACL
Sbjct  244  CLALVRASKACL  255


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  9146  CLSL---NKACL  9172
             CL L    KACL
Sbjct  244   CLALVRASKACL  255


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 13/30 (43%)
 Frame = +2

Query  6005  PNPQEVVLVNVTENFNMWKNDMVEQMHEDI  6094
             P PQE      T+ F        EQ H  I
Sbjct  80    PSPQE------TQKF-------CEQVHAAI  96


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6777  ALLML  6763
             ALLML
Sbjct  173   ALLML  177


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  175  LAVAPEQGPE  204
            L V P Q PE
Sbjct  136  LSVTPTQSPE  145


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -1

Query  1540  AVCPSL--P--QLKHL  1505
             AV P L  P  QL HL
Sbjct  10    AV-PTLASPLEQLRHL  24


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  8661  VFFGSELALPVP  8626
             VF  S+L LP P
Sbjct  73    VF--SQLPLPSP  82


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  1195  CLMS-RMLV  1172
             CL   RMLV
Sbjct  254   CLKKIRMLV  262


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6996  KEVTQS  7013
             KE TQS
Sbjct  351   KELTQS  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  6038  TENFN--M-W  6058
             TE FN  M W
Sbjct  44    TEEFNREMFW  53


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 3/12 (25%)
 Frame = -2

Query  3087  FCI---SAIKSF  3061
             FC     AIK F
Sbjct  88    FCEQVHAAIKAF  99


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8816  FIGLFYL  8796
             FI  +YL
Sbjct  99    FIAVYYL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7902  PCLTL  7888
             PCL L
Sbjct  243   PCLAL  247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6842  TIIFKQ  6859
             TI+F Q
Sbjct  71    TIVFSQ  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8276  ACRAIRHIPR  8305
             AC    +IPR
Sbjct  158   ACQQMPQIPR  167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  375  LILPR  361
            L LPR
Sbjct  30   LLLPR  34


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6693  VSRE  6704
             VSRE
Sbjct  63    VSRE  66


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1159  LTILF  1145
             LTI F
Sbjct  70    LTIVF  74


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1908  LISSNTV  1888
             LIS N V
Sbjct  149   LISYNSV  155


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6176  NDTNTNSS  6199
             NDT  N S
Sbjct  206   NDTEENNS  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7569  ENSFAPLL  7592
             E+S  PLL
Sbjct  332   EDSWIPLL  339


>ref|NP_005337.2|  heat shock 70 kDa protein 1A/1B [Homo sapiens]
Length=641

 GENE ID: 3304 HSPA1B | heat shock 70kDa protein 1B [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  942  LLTFAWLLDVPPLCL  898
            LL    LLDV PL L
Sbjct  391  LL----LLDVAPLSL  401


 Score = 19.3 bits (38),  Expect(2) =  3280
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1386  QGVGGPG  1406
             QG GGPG
Sbjct  612   QGAGGPG  618


 Score = 16.8 bits (32),  Expect(2) =  3280
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  1266  QEVKNWM-TETL  1298
             QEV  W+   TL
Sbjct  575   QEVISWLDANTL  586


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  2312  KLV-DF---RELNK  2341
             KL  DF   R+LNK
Sbjct  348   KLLQDFFNGRDLNK  361


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4376  VDIIATD  4396
             V+IIA D
Sbjct  26    VEIIAND  32


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1457  YHNDAERQ  1480
             Y ND +RQ
Sbjct  149   YFNDSQRQ  156


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  6467  TSYYYILESQNQPG  6426
             T Y     S NQPG
Sbjct  429   TTY-----SDNQPG  437


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8796  KIEEANK  8816
             KI EA+K
Sbjct  561   KISEADK  567


 Score = 15.9 bits (30),  Expect(2) = 27423
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4781  NNNILG  4798
             +NN LG
Sbjct  452   DNNLLG  457


 Score = 15.5 bits (29),  Expect(2) = 27423
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4717  MKALI  4731
             M ALI
Sbjct  410   MTALI  414


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  4477  LERTSKAPLER  4509
             L+RT K   ER
Sbjct  185   LDRTGKG--ER  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8895  FDSRL  8909
             FD RL
Sbjct  233   FDNRL  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1764  EPIDKEL  1784
             EP++K L
Sbjct  315   EPVEKAL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7555  NPQELLIL  7532
             N Q+LL L
Sbjct  387   NVQDLLLL  394


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3459  QDMLLIE  3479
             QD+LL +
Sbjct  389   QDLLLLD  395


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6039  VTFTNT  6022
             V FT+T
Sbjct  42    VAFTDT  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4083  FKRK  4072
             FKRK
Sbjct  245   FKRK  248


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 6/19 (31%)
 Frame = -1

Query  1285  IQFFTSC------EACSAL  1247
             I F+TS       E CS L
Sbjct  291   IDFYTSITRARFEELCSDL  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = -3

Query  9095  QRDPVQAKSSCL--YA  9054
             QR+ V AK   L  YA
Sbjct  532   QRERVSAKNA-LESYA  546


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4588  IIPND  4574
             II ND
Sbjct  28    IIAND  32


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2324  NLLIF  2310
             N LIF
Sbjct  194   NVLIF  198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = -2

Query  7281  LLFALVGATPNGSIFT  7234
             L F L G T + SI T
Sbjct  196   LIFDLGGGTFDVSILT  211


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3116  FDMSI  3102
             FD SI
Sbjct  205   FDVSI  209


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  2900  DLPNSISP  2877
             DL  SI P
Sbjct  358   DLNKSINP  365


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  8222  TAIAVAEGTDR  8254
             TA A+A G DR
Sbjct  177   TAAAIAYGLDR  187


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  124  SHNRRA  107
            S+N RA
Sbjct  254  SQNKRA  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 5/18 (27%)
 Frame = -1

Query  988  TGC-----TLSHSAASSL  950
            T C     TLS S   SL
Sbjct  265  TACERAKRTLSSSTQASL  282


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5308  QQLLQN  5291
             Q LLQ+
Sbjct  347   QKLLQD  352


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8087  DLLL  8098
             DLLL
Sbjct  390   DLLL  393


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7532  KDQQLLG  7552
             KD  LLG
Sbjct  451   KDNNLLG  457


>ref|NP_003132.2|  52 kDa Ro protein [Homo sapiens]
Length=475

 GENE ID: 6737 TRIM21 | tripartite motif-containing 21 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3962  VAIFLDY  3942
             V IFLDY
Sbjct  407   VGIFLDY  413


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5379  HFLLSS  5362
             HFLLSS
Sbjct  368   HFLLSS  373


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2025  NTVPIALCP  1999
             NT P  LCP
Sbjct  456   NTAPLTLCP  464


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5994  YPQTPTH  6014
             YPQTP H
Sbjct  393   YPQTPLH  399


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  3960  CHIPGL  3943
             CH+PGL
Sbjct  273   CHVPGL  278


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8620  KRGDWK  8637
             KR DWK
Sbjct  163   KRADWK  168


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 16/39 (41%)
 Frame = +2

Query  7415  VQQQNNLLRAIEAQQHLLQLTVWGIKQL------QARIL  7513
             VQQ N L   +E +Q  LQ       +L      Q RIL
Sbjct  183   VQQKNFL---VEEEQRQLQ-------ELEKDEREQLRIL  211


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  170  NL*QWRPNRDL  202
            NL   RPNR L
Sbjct  62   NL---RPNRQL  69


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  523  CPSICLQP  500
            CP ICL P
Sbjct  16   CP-ICLDP  22


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5924  LFCASDAKA  5950
             LFC  D KA
Sbjct  101   LFCEKDGKA  109


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  2050  NWKKSVD  2070
             +WKK V+
Sbjct  166   DWKKTVE  172


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             LELL+E
Sbjct  241   LELLQE  246


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +2

Query  7784  WFNITNWLW  7810
             W   T WLW
Sbjct  378   W---TIWLW  383


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6814  IKRTIWK  6834
             IKR  WK
Sbjct  162   IKRADWK  168


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 10/21 (47%)
 Frame = +2

Query  8948  LQELLT-------SS---LLQ  8980
             LQEL         SS   LLQ
Sbjct  225   LQELISELDRRCHSSALELLQ  245


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4819  SLSPVCR  4799
             S  PVCR
Sbjct  49    SVCPVCR  55


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  5417  QEVSLKLLVPIAI  5455
             QE   KL V IAI
Sbjct  150   QELAEKLEVEIAI  162


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4336  KRGDW  4350
             KR DW
Sbjct  163   KRADW  167


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3436  VSCPI  3422
             V CPI
Sbjct  14    VTCPI  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6767  ISRAKWNNT  6793
             I RA W  T
Sbjct  162   IKRADWKKT  170


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  268  CRARF  254
            CR RF
Sbjct  54   CRQRF  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1254  EQASQE  1271
             E+A QE
Sbjct  129   EEAAQE  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  369  ELDR  380
            ELDR
Sbjct  231  ELDR  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8045  DLRSLC  8062
             +LRS C
Sbjct  268   ELRSVC  273


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5091  LTEDR  5105
             L EDR
Sbjct  302   LSEDR  306


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4590  ENRWQV  4607
             E+R QV
Sbjct  304   EDRRQV  309


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3796  LIYS  3785
             LIYS
Sbjct  429   LIYS  432


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8622  FLLK  8611
             FLLK
Sbjct  58    FLLK  61


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  6788  NTLKQIASKLRE  6823
             N LK+I    RE
Sbjct  74    NNLKEISQEARE  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2725  EVGTY  2739
             E GTY
Sbjct  389   EAGTY  393


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1928  VSIFL  1914
             V IFL
Sbjct  407   VGIFL  411


>pdb|1FM5|A  Chain A, Crystal Structure Of Human Cd69
Length=199


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7781  NWFNIT  7798
             NWFN+T
Sbjct  163   NWFNVT  168


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  620  RHQGSF  637
            RH+GSF
Sbjct  32   RHEGSF  37


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  205  FQVPV  191
            FQVPV
Sbjct  37   FQVPV  41


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  8820  ENTSLLHP  8843
             EN S LHP
Sbjct  10    ENSS-LHP  16


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4033  CFYIST  4016
             C++IST
Sbjct  96    CYFIST  101


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3387  FSNWY  3373
             F NW+
Sbjct  161   FNNWF  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -2

Query  6627  TIMV---LALSV  6601
             TI++    ALSV
Sbjct  52    TILIIALIALSV  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3693  WHGYQ  3707
             W GYQ
Sbjct  89    WVGYQ  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4049  ETGQE  4063
             E GQE
Sbjct  17    ESGQE  21


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6323  DNDTTS  6340
             +ND TS
Sbjct  21    ENDATS  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2920  FNPWVNLT  2897
             FN W N T
Sbjct  161   FNNWFNVT  168


>pdb|3FCT|A  Chain A, Mature Metal Chelatase Catalytic Antibody With Hapten
 pdb|3FCT|C  Chain C, Mature Metal Chelatase Catalytic Antibody With Hapten
 pdb|1NGW|L  Chain L, Chimeric Affinity Matured Fab 7g12 Complexed With Mesoporphyrin
 pdb|1NGW|A  Chain A, Chimeric Affinity Matured Fab 7g12 Complexed With Mesoporphyrin
Length=213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8480  QYSSY  8494
             QYSSY
Sbjct  90    QYSSY  94


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS   SEDL
Sbjct  75    ISNMQSEDL  83


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1400  SSYSLT  1383
             SSY LT
Sbjct  92    SSYPLT  97


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3251  TPKF  3262
             TPKF
Sbjct  7     TPKF  10


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5495  VMKQT  5481
             VM QT
Sbjct  3     VMTQT  7


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2321  LLIFS  2307
             LLI+S
Sbjct  46    LLIYS  50


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>sp|P41279.2|M3K8_HUMAN  RecName: Full=Mitogen-activated protein kinase kinase kinase 
8; AltName: Full=Serine/threonine-protein kinase cot; AltName: 
Full=Proto-oncogene c-Cot; AltName: Full=Cancer Osaka thyroid 
oncogene; AltName: Full=Tumor progression locus 2; Short=TPL-2
Length=467

 GENE ID: 1326 MAP3K8 | mitogen-activated protein kinase kinase kinase 8
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 0/18 (0%)
 Frame = -3

Query  7265  WVlllmvqfllLYIYIIH  7212
             WV          Y YIIH
Sbjct  327   WVKRYPRSAYPSYLYIIH  344


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 7/24 (29%)
 Frame = -2

Query  2490  MVNAVYF---LKSSSKGTEKYASP  2428
             M   VYF   L     GTE Y SP
Sbjct  277   MTEDVYFPKDLR----GTEIYMSP  296


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3938  DCSPGIWQL  3964
             DCSPG  +L
Sbjct  356   DCSPGMREL  364


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5700  ENIKTKK  5720
             ++IKTKK
Sbjct  156   QDIKTKK  162


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4831  PKCQSL  4814
             P CQSL
Sbjct  396   PRCQSL  401


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +3

Query  7719  KTSKKRM  7739
             KT KKRM
Sbjct  159   KT-KKRM  164


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  7792  HNKLAVVYKIIHND  7833
             H K     K+IH D
Sbjct  245   HSK-----KVIHHD  253


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  9014  TPPW  9003
             TPPW
Sbjct  324   TPPW  327


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/26 (38%), Positives = 10/26 (38%), Gaps = 11/26 (42%)
 Frame = -1

Query  289  QSPPLA----SCRARFSKPSPASREL  224
            Q PPL      C       SP  REL
Sbjct  346  QAPPLEDIADDC-------SPGMREL  364


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5078  RQRWLY  5061
             RQR LY
Sbjct  440   RQRSLY  445


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6961  IKPSTI  6944
             IKPS I
Sbjct  254   IKPSNI  259


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +2

Query  2624  DIVIYQYMDDLY  2659
             DI     M++LY
Sbjct  28    DI-----MENLY  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             KL+PV+
Sbjct  167   KLIPVD  172


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 4/19 (21%)
 Frame = +1

Query  8329  DFAIRWVASGQKVV*LDGL  8385
             +F I WV    K V L GL
Sbjct  227   EFEIIWVT---KHV-LKGL  241


 Score = 16.3 bits (31),  Expect(2) = 31363
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5122  RPRATE  5139
             RPRA +
Sbjct  376   RPRAAD  381


 Score = 15.1 bits (28),  Expect(2) = 31363
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5180  LKNEA  5194
             LK EA
Sbjct  383   LKHEA  387


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1371  MMTACQ  1388
             +MT CQ
Sbjct  46    LMTMCQ  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6354  VVTPQ  6368
             V+TPQ
Sbjct  113   VITPQ  117


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8974  QARCQ  8960
             Q RCQ
Sbjct  395   QPRCQ  399


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7164  PRSSDL  7181
             PR  DL
Sbjct  377   PRAADL  382


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  463  RSSSLL  446
            RS SLL
Sbjct  59   RSKSLL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6077  QMHEDI  6094
             QM ED+
Sbjct  276   QMTEDV  281


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  2869  LYVIDSPAVF  2840
             LY  + PAV+
Sbjct  33    LYASEEPAVY  42


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  850  NMGIT  836
            NM IT
Sbjct  111  NMVIT  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5999  WVHRHV  5982
             WV  HV
Sbjct  232   WVTKHV  237


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5965  YLCII  5951
             YL II
Sbjct  339   YLYII  343


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3061  KRLNSR  3078
             KRL SR
Sbjct  409   KRLLSR  414


>sp|P30479.1|1B41_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-41 alpha 
chain; AltName: Full=MHC class I antigen B*41; AltName: 
Full=Bw-41; Flags: Precursor
Length=362

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4173  RESSRNL  4193
             RES RNL
Sbjct  99    RESLRNL  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7073  TLLFLLSA  7050
             T L LLSA
Sbjct  8     TVLLLLSA  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7174  QTWRRRY  7194
             +TW R Y
Sbjct  117   HTWQRMY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL   LA
Sbjct  11    LLLSAALA  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  3113  QIYQEPFKNL  3142
             Q Y E   NL
Sbjct  96    QTYRESLRNL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 9/21 (42%)
 Frame = +2

Query  4421  QITKI--Q-------NFRVYY  4456
             QI K   Q       N R YY
Sbjct  89    QISKTNTQTYRESLRNLRGYY  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2022  TVPI  2011
             TVPI
Sbjct  305   TVPI  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  8724  CSSANQGS--SL  8695
             CS   QGS  SL
Sbjct  349   CSDSAQGSDVSL  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


>ref|NP_002146.2|  heat shock 70 kDa protein 6 [Homo sapiens]
Length=643

 GENE ID: 3310 HSPA6 | heat shock 70kDa protein 6 (HSP70B') [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = -2

Query  942  LLTFAWLLDVPPLCL  898
            LL    LLDV PL L
Sbjct  393  LL----LLDVAPLSL  403


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  9095  QRDPVQAKSS  9066
             QRD V AK S
Sbjct  534   QRDRVAAKNS  543


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8874  REVLEW  8891
             REVL W
Sbjct  577   REVLAW  582


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3273  YKRKHGK  3293
             + RKHGK
Sbjct  247   FRRKHGK  253


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1457  YHNDAERQ  1480
             Y ND +RQ
Sbjct  151   YFNDSQRQ  158


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  2312  KLV-DF---RELNK  2341
             KL  DF    ELNK
Sbjct  350   KLLQDFFNGKELNK  363


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  3453  EK-QDMLLIE  3479
             EK QD+LL +
Sbjct  388   EKVQDLLLLD  397


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  6467  TSYYYILESQNQPG  6426
             T Y     S NQPG
Sbjct  431   TTY-----SDNQPG  439


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6634  EHICR  6648
             E+ICR
Sbjct  602   EQICR  606


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  759  MVHQA  773
            MVH+A
Sbjct  520  MVHEA  524


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5408  GSIQEVSL  5431
             GS QE SL
Sbjct  553   GSLQEESL  560


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -2

Query  2187  IFSSVNGHCLTFGPSIPG  2134
             IFS   G     GP +PG
Sbjct  608   IFSRLYG-----GPGVPG  620


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3994  PGSSSC  4011
             PG SSC
Sbjct  619   PGGSSC  624


 Score = 16.8 bits (32),  Expect(2) = 19203
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8895  FDSRL  8909
             FD RL
Sbjct  235   FDNRL  239


 Score = 15.5 bits (29),  Expect(2) = 19203
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8870  GERSV  8884
             GER V
Sbjct  193   GERNV  197


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  8967  RACYKG  8984
             R CY G
Sbjct  106   RVCYRG  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1764  EPIDKEL  1784
             EP++K L
Sbjct  317   EPVEKAL  323


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1708  HQKR  1719
             HQKR
Sbjct  596   HQKR  599


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6039  VTFTNT  6022
             V FT+T
Sbjct  44    VAFTDT  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6557  GSLAEE  6574
             GSL EE
Sbjct  553   GSLQEE  558


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  450  RELE  461
            RELE
Sbjct  599  RELE  602


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2324  NLLIF  2310
             N LIF
Sbjct  196   NVLIF  200


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7549  QELLIL  7532
             Q+LL L
Sbjct  391   QDLLLL  396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4781  NNNILG  4798
             +NN LG
Sbjct  454   DNNLLG  459


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5308  QQLLQN  5291
             Q LLQ+
Sbjct  349   QKLLQD  354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4241  KELKKII  4261
             KEL K I
Sbjct  359   KELNKSI  365


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1295  LVGPKCE  1315
             L G KCE
Sbjct  382   LMGDKCE  388


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8087  DLLL  8098
             DLLL
Sbjct  392   DLLL  395


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7532  KDQQLLG  7552
             KD  LLG
Sbjct  453   KDNNLLG  459


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3518  QKTELQAI  3541
             QK EL+ I
Sbjct  597   QKRELEQI  604


>ref|NP_005182.1|  T-lymphocyte activation antigen CD80 precursor [Homo sapiens]
Length=288

 GENE ID: 941 CD80 | CD80 molecule [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1644  IWPSYKGR  1667
             IWP YK R
Sbjct  83    IWPEYKNR  90


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2700  IFVLCC  2683
             IFV CC
Sbjct  257   IFVICC  262


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5394  RIYW  5383
             RIYW
Sbjct  63    RIYW  66


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8251  ICPLSYCY  8228
             IC L YC+
Sbjct  260   ICCLTYCF  267


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1451  ICYLAHCF  1428
             IC L  CF
Sbjct  260   ICCLTYCF  267


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1505  NNLSLV  1488
             NNLS V
Sbjct  97    NNLSIV  102


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  579  VATLYCVH  602
            VATL C H
Sbjct  45   VATLSCGH  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  482  PVRNIRR  502
            P  NIRR
Sbjct  153  PTSNIRR  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  158  VSVENL  175
            VSVE L
Sbjct  54   VSVEEL  59


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8394  ERMRR  8408
             ER+RR
Sbjct  278   ERLRR  282


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1100  RWIIC  1086
             R IIC
Sbjct  158   RRIIC  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 0/15 (0%)
 Frame = -2

Query  3804  SWALSIPSKNSTFLI  3760
             SWA    S N  F I
Sbjct  246   SWAITLISVNGIFVI  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3231  LSVVI  3217
             LS+VI
Sbjct  99    LSIVI  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  3240  ITMLSV----VI  3217
             IT+ SV    VI
Sbjct  249   ITLISVNGIFVI  260


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  193  QGPESE  210
            Q PE E
Sbjct  191  QDPETE  196


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6762  VTLVEQNGI  6788
             +TL+  NGI
Sbjct  249   ITLISVNGI  257


>pdb|1K5N|A  Chain A, Hla-B2709 Bound To Nona-Peptide M9
 pdb|1JGD|A  Chain A, Hla-B2709 Bound To Deca-Peptide S10r
 pdb|1OF2|A  Chain A, Crystal Structure Of Hla-B2709 Complexed With The Vasoactive 
Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 
400-408)
 pdb|1W0W|A  Chain A, Crystal Structure Of Hla-B2709 Complexed With The Self- 
Peptide Tis From Egf-Response Factor 1
 pdb|3B3I|A  Chain A, Citrullination-Dependent Differential Presentation Of 
A Self-Peptide By Hla-B27 Subtypes
 pdb|3BP7|A  Chain A, The High Resolution Crystal Structure Of Hla-B2709 In 
Complex With A Cathepsin A Signal Sequence Peptide, Pcata
 pdb|3CZF|A  Chain A, Crystal Structure Of Hla-B2709 Complexed With The Glucagon 
Receptor (Gr) Peptide (Residues 412-420)
 pdb|3HCV|A  Chain A, Crystal Structure Of Hla-B2709 Complexed With The Double 
Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor 
(Vipr) Peptide (Residues 400-408)
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  540  QTGSEELRSL---YN  575
            QT  E+LR L   YN
Sbjct  72   QTDREDLRTLLRYYN  86


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DLR L
Sbjct  76    EDLRTL  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  11    SVSRPGRGE  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


>ref|NP_004480.1|  G protein pathway suppressor 2 [Homo sapiens]
Length=327

 GENE ID: 2874 GPS2 | G protein pathway suppressor 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8523  QEEEEV  8540
             QEEEEV
Sbjct  31    QEEEEV  36


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = +3

Query  1461  IMMQRGNFRNQRK  1499
             IMM+R     +RK
Sbjct  22    IMMER-----ERK  29


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5970  MFGPH  5984
             MFGP+
Sbjct  153   MFGPQ  157


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  8876  SLRVIHPMQA  8847
             SLR  HP QA
Sbjct  270   SLRPMHP-QA  278


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8568  LRPM  8579
             LRPM
Sbjct  271   LRPM  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +3

Query  3714  KELEE-M  3731
             KE+EE M
Sbjct  54    KEMEERM  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3731  EQVDKL  3748
             E+VDK+
Sbjct  34    EEVDKM  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1311  HFGPT  1297
             H+GPT
Sbjct  196   HYGPT  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6363  PQSLH  6377
             PQ LH
Sbjct  276   PQALH  280


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6564  RLPF  6553
             RLPF
Sbjct  312   RLPF  315


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2173  DRRKNK  2190
             +RRK K
Sbjct  49    ERRKKK  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6059  KNDMVEQM  6082
             K +M E M
Sbjct  53    KKEMEERM  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4557  QEEKQR  4574
             +EEK R
Sbjct  96    EEEKRR  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4626  LLATQSSP  4603
             LL  Q SP
Sbjct  128   LLSMQGSP  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4998  GHNKVGSL  5021
             GHN  G L
Sbjct  137   GHNRPGTL  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 11/20 (55%)
 Frame = -1

Query  2734  SPPQQM-----------LSQ  2708
             SP QQ+           LSQ
Sbjct  205   SPSQQLRAPSAFPAVQYLSQ  224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 10/25 (40%)
 Frame = -3

Query  8966  MSAVLEVLRMQLSG--------HVM  8916
             M A LE  R  LS         H+M
Sbjct  1     MPALLE--RPKLSNAMARALHRHIM  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2386  RRVKKE  2403
             RR KKE
Sbjct  50    RRKKKE  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9067  AAYMQDL  9047
             AAY Q L
Sbjct  114   AAYQQSL  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6162  HFKLTQSG  6139
             HF  TQ G
Sbjct  235   HFQPTQTG  242


>sp|P30483.1|1B45_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-45 alpha 
chain; AltName: Full=MHC class I antigen B*45; AltName: 
Full=Bw-45; Flags: Precursor
Length=362


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4173  RESSRNL  4193
             RES RNL
Sbjct  99    RESLRNL  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7073  TLLFLLSA  7050
             T L LLSA
Sbjct  8     TVLLLLSA  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7174  QTWRRRY  7194
             +TW R Y
Sbjct  117   HTWQRMY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL   LA
Sbjct  11    LLLSAALA  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  3113  QIYQEPFKNL  3142
             Q Y E   NL
Sbjct  96    QTYRESLRNL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 9/21 (42%)
 Frame = +2

Query  4421  QITKI--Q-------NFRVYY  4456
             QI K   Q       N R YY
Sbjct  89    QISKTNTQTYRESLRNLRGYY  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  183   YLEGLC  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


>ref|NP_002911.2|  transcription factor RFX4 isoform b [Homo sapiens]
Length=563

 GENE ID: 5992 RFX4 | regulatory factor X, 4 (influences HLA class II
expression) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5110  TSPRRPRATE  5139
             T PRR R TE
Sbjct  15    TRPRRRRSTE  24


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  2650  IHVLIDNYV  2624
             IH + D+YV
Sbjct  465   IHLMFDDYV  473


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 8/24 (33%)
 Frame = +2

Query  7100  RCSSNITGLLLTRDGGN-SNNESE  7168
             R SS  T L      GN SN+E E
Sbjct  38    RYSSH-TSL------GNVSNDENE  54


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 11/23 (47%)
 Frame = -3

Query  4871  AIS--LFP------PFYGDSLTQ  4827
             AIS  L P      P   DSLTQ
Sbjct  271   AISGVLMPTVLQALP---DSLTQ  290


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3408  SAPTMGSF  3385
             SAP  GSF
Sbjct  455   SAPSFGSF  462


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6373  YTGLS  6387
             YTGLS
Sbjct  547   YTGLS  551


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2716  TSVEV  2730
             TSVEV
Sbjct  529   TSVEV  533


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1884  SAPVSN  1867
             S PVSN
Sbjct  537   SSPVSN  542


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +3

Query  8403  RRAEPAA--DR  8429
             RRA P A  DR
Sbjct  4     RRAHPGAGGDR  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  706  TAIRSAKIT  732
            T I SA IT
Sbjct  344  TVIHSADIT  352


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5342  QNRRYS  5359
             +N RYS
Sbjct  35    ENKRYS  40


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4287  ILRQQY  4304
             I RQQ+
Sbjct  115   IIRQQF  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  3477  LLVTYPAFPN  3448
             LL   P FPN
Sbjct  186   LL---PEFPN  192


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  3504  LTQQIRRLSYKQ  3539
             LTQ IR    KQ
Sbjct  288   LTQVIRKFA-KQ  298


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3807  NMRNI  3821
             N+RNI
Sbjct  313   NLRNI  317


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 5/19 (26%)
 Frame = +2

Query  5534  DS-DEELIRTVRLIKLLYQ  5587
             DS DE   R   LI  LYQ
Sbjct  377   DSRDEH--R--KLITQLYQ  391


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4860  KRYSTQ  4877
             KRYS +
Sbjct  37    KRYSSH  42


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5159  TLELLEE  5179
             TL+ LEE
Sbjct  70    TLQWLEE  76


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  789  LNAWVKV  809
            L+ W KV
Sbjct  299  LDEWLKV  305


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1526  RRAH  1537
             RRAH
Sbjct  4     RRAH  7


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4571  KIIR  4582
             KIIR
Sbjct  114   KIIR  117


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6061  FPHVK  6047
             FP VK
Sbjct  190   FPNVK  194


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  1936  HFW  1928
             HFW
Sbjct  239   HFW  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4860  FSSILWR  4840
             FS IL R
Sbjct  325   FSQILRR  331


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7506  LAWSC  7492
             L WSC
Sbjct  438   LMWSC  442


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5701  KILRQ  5715
             KI RQ
Sbjct  114   KIIRQ  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1796  FPQVT  1810
             FPQ T
Sbjct  120   FPQLT  124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2960  LTEVI  2974
             LT+VI
Sbjct  288   LTQVI  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  4574  IIRDYGKQM  4600
             +IR + KQ+
Sbjct  291   VIRKFAKQL  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7893  TLFTIE  7876
             TL+T E
Sbjct  371   TLYTME  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  7538  QQLLGIWGC  7564
             QQ L  W C
Sbjct  434   QQFLLMWSC  442


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP P P P
Sbjct  513   APTPSPVP  520


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  4649  PCSNPHPVY  4623
             P SNP P Y
Sbjct  539   PVSNPSPEY  547


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7208  RSELY  7222
             RS LY
Sbjct  88    RSALY  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3759  ESGKYY  3776
             ES  YY
Sbjct  145   ESSQYY  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  703  DTAIR  717
            DT IR
Sbjct  223  DTVIR  227


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = -2

Query  2574  NIAGDPFHPCGSTLY  2530
             NI G     C S LY
Sbjct  259   NIVG----VCDSILY  269


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4287  ILRQQ  4301
             ILR Q
Sbjct  328   ILRRQ  332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  4845  IEW  4853
             IEW
Sbjct  407   IEW  409


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7918  VSDPPP  7935
             VS+P P
Sbjct  540   VSNPSP  545


>ref|NP_742150.1|  interleukin-28A precursor [Homo sapiens]
Length=200

 GENE ID: 282616 IL28A | interleukin 28A (interferon, lambda 2) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 14/28 (50%)
 Frame = -3

Query  5102  ILCQFRN-----------TRQR---WLY  5061
             IL QFR            TR R   WLY
Sbjct  133   ILSQFRACIQPQPTAGPRTRGRLHHWLY  160


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +2

Query  7481  WGIKQLQARILAVER  7525
             W   QLQ R    ER
Sbjct  84    WDLRQLQVR----ER  94


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -1

Query  3268  QFKFRSLSP  3242
             QFK  SLSP
Sbjct  45    QFK--SLSP  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 9/21 (42%)
 Frame = -2

Query  2949  PLRSLHNCLTLIPG*I*LAQF  2887
             PL  LH     I     L QF
Sbjct  126   PLHTLHH----I-----LSQF  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1715  RELQVWGR  1738
             R+LQV  R
Sbjct  87    RQLQVRER  94


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3379  VRER  3390
             VRER
Sbjct  91    VRER  94


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8690  HTRLLP  8707
             H RL P
Sbjct  76    HSRLFP  81


>ref|NP_258428.2|  membrane metallo-endopeptidase-like 1 [Homo sapiens]
Length=779

 GENE ID: 79258 MMEL1 | membrane metallo-endopeptidase-like 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = +2

Query  413  EKI*IKTYSMGKQGARTI  466
            E I I TYS     ARTI
Sbjct  384  ENI-IDTYS-----ARTI  395


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3720  LEEMN  3734
             LEEMN
Sbjct  515   LEEMN  519


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  2644  VLIDNYVW  2621
             VLID ++W
Sbjct  231   VLIDLFIW  238


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6563  LAEEEVVI  6586
             L +EEVV+
Sbjct  367   LPDEEVVV  374


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  1886  DTVLEEM  1906
             D +LEEM
Sbjct  512   DYILEEM  518


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  1513  SIVAKKGTQP  1542
             S++ K G QP
Sbjct  179   SVIEKRGSQP  188


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1872  IQEQMIQ  1892
             +QE M+Q
Sbjct  301   VQEDMVQ  307


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -3

Query  1214  KGFLWSLSYVQ  1182
             KGF W L ++Q
Sbjct  347   KGFNWTL-FIQ  356


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -3

Query  1787  IQ-FLVYRLLL  1758
             IQ +LV RL L
Sbjct  395   IQNYLVWRLVL  405


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 9/23 (39%)
 Frame = +2

Query  8090  LLLIVTRIVEL--LG-----RRG  8137
             LLL VT    L  LG     RRG
Sbjct  32    LLLLVT--AALVALGVLYADRRG  52


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4121  DNGSNF  4138
             DNG NF
Sbjct  621   DNGRNF  626


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6403  LKGYLWT  6383
             LKG+ WT
Sbjct  346   LKGFNWT  352


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  5297  QQLLFIHF-QNW  5329
             +QL FI + Q W
Sbjct  712   EQLFFINYAQVW  723


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/16 (37%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -1

Query  1192  LMS-----RMLVGLYI  1160
             LM      R L+ L+I
Sbjct  222   LMNSQFNRRVLIDLFI  237


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  6613  SIVRE-ID  6593
             S VRE ID
Sbjct  466   SMVRELID  473


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
 Frame = +3

Query  897  LNTVGGHQAAMQMLKETINEEAAEWD  974
            L  VGG   AM    ET+     EW+
Sbjct  193  LEVVGGWPVAMDRWNETV---GLEWE  215


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = -1

Query  2785  HPKEW-RFFLMFFVW  2744
             HPKE  R      VW
Sbjct  771   HPKERCR------VW  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  999  ALHALDALY  973
            AL AL  LY
Sbjct  39   ALVALGVLY  47


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5794  ALVEMGV  5814
             ALV +GV
Sbjct  39    ALVALGV  45


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5842  HPKE  5831
             HPKE
Sbjct  771   HPKE  774


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2200  RNLYR  2214
             R LYR
Sbjct  169   RTLYR  173


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4752  VLLNLF  4735
             VL +LF
Sbjct  231   VLIDLF  236


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1648  GLPTRE  1665
             G+P RE
Sbjct  257   GMPSRE  262


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 4/18 (22%)
 Frame = +2

Query  3683  KVYLAWVPAHKGIGGNEQ  3736
             K YL W       GG +Q
Sbjct  689   KAYLKWMAE----GGKDQ  702


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1822  TPRHNKDR  1845
             TP H K+R
Sbjct  768   TPMHPKER  775


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1996  DFYEY  1982
             DFY++
Sbjct  114   DFYQF  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5899  RYPIID  5882
             RY I D
Sbjct  135   RYSIFD  140


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1944  ELEV  1955
             ELEV
Sbjct  145   ELEV  148


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  1293  TLLVQNAN  1316
             TLL ++AN
Sbjct  286   TLLREDAN  293


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3440  ETKLGKA  3460
             ET L KA
Sbjct  312   ETQLAKA  318


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2607  LENKIQT  2627
             LEN I T
Sbjct  383   LENIIDT  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  7187  GDMRDNWRS  7213
             G+M D W S
Sbjct  630   GNMMD-WWS  637


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3538  NLSSFA  3555
             NL  FA
Sbjct  754   NLAAFA  759


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  2616  CFLKGSKIFV  2587
             CFL     FV
Sbjct  63    CFLQEERTFV  72


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5345  NRRYS  5359
             N RYS
Sbjct  133   NSRYS  137


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  573  NTVATLY  593
            N V  LY
Sbjct  449  NAVGSLY  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  949  SMRKL  963
            S+RKL
Sbjct  551  SLRKL  555


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4293  RQQYK  4307
             RQ YK
Sbjct  685   RQAYK  689


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9123  ELPGSDL  9103
             +LPG DL
Sbjct  703   QLPGLDL  709


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  38   ELPGSDL  18
            +LPG DL
Sbjct  703  QLPGLDL  709


>ref|NP_036288.2|  band 4.1-like protein 1 isoform a [Homo sapiens]
Length=881

 GENE ID: 2036 EPB41L1 | erythrocyte membrane protein band 4.1-like 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 21/62 (33%), Positives = 23/62 (37%), Gaps = 33/62 (53%)
 Frame = +2

Query  2666  SDLEIGQHRT--KIEELR--QHLLRWGLTTP-------DK------KHQ----------K  2764
             S+ E G+ RT  KI EL   Q       TTP       DK      KHQ          K
Sbjct  466   SEAEEGEVRTPTKIKELKPEQE------TTPRHKQEFLDKPEDVLLKHQASINELKRTLK  519

Query  2765  EP  2770
             EP
Sbjct  520   EP  521


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +3

Query  1743  TTPPQKQEPIDK  1778
             TTP +KQE  DK
Sbjct  488   TTPRHKQEFLDK  499


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  5116  PRRPRATEGAT  5148
             P RPRA E  T
Sbjct  570   PPRPRAPESDT  580


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5999  TDPNPQE  6019
             TDP P+E
Sbjct  867   TDPSPEE  873


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3708  HTKELEE  3728
             +T ELEE
Sbjct  246   QTRELEE  252


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2860  IDSPAVFF  2837
             ID PA FF
Sbjct  410   IDRPAPFF  417


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1819  TTPRH  1833
             TTPRH
Sbjct  488   TTPRH  492


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8287  SSTSSL  8270
             SSTSSL
Sbjct  611   SSTSSL  616


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2486  TIPSINNET  2512
             T PSI  ET
Sbjct  743   TTPSITTET  751


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3218  ITTESI  3235
             ITTE I
Sbjct  747   ITTETI  752


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  3077  EIQKQGQGQ  3103
             E++K+G GQ
Sbjct  112   EVEKHGRGQ  120


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -3

Query  2387  RDVVFL------IE  2364
             RD VFL      IE
Sbjct  589   RDTVFLKDNHLAIE  602


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  5887  LWGTCVEGSNHH  5922
             LW  C+E   HH
Sbjct  363   LWKVCIE---HH  371


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 28/52 (53%)
 Frame = -3

Query  1613  TIFHLVS-------FL---STF------------PTALFPRGPAISGCVPFF  1524
             T F LVS       FL   S F              AL  R PA     PFF
Sbjct  372   TFFRLVSPEPPPKGFLVMGSKFRYSGRTQAQTRQASALIDR-PA-----PFF  417


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3838  CSPITV  3821
             CS ITV
Sbjct  605   CSSITV  610


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2048  IIGRNLLT  2071
             IIG + LT
Sbjct  786   IIGKDVLT  793


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6002  LWVHRHVWPK  5973
             L + R  WPK
Sbjct  314   LRINRFAWPK  323


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3256  RSLSP  3242
             RSLSP
Sbjct  781   RSLSP  785


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  4241  KELKKIIGQVR  4273
             KE KK   Q+R
Sbjct  156   KEIKK---QIR  163


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4406  KELQKQI  4426
             KE  KQI
Sbjct  156   KEIKKQI  162


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8442  SRDLEK  8459
             SRDL K
Sbjct  658   SRDLNK  663


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4400  QTKELQKQI  4426
             QT EL+  I
Sbjct  246   QTRELEERI  254


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5563  QTHQAS  5580
             QT QAS
Sbjct  402   QTRQAS  407


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  7585  GANEFSR  7565
             GA EFSR
Sbjct  433   GA-EFSR  438


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7121  GLLLTRD  7141
             GLL  RD
Sbjct  654   GLLFSRD  660


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/24 (33%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  1005  APGQMREPRGSDIAGTTSTLQEQI  1076
             AP Q RE            L+E I
Sbjct  243   APNQTRE------------LEERI  254


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6680  RKRIRIQR  6703
             R R RI R
Sbjct  311   RDRLRINR  318


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             PS P SP
Sbjct  539   PSSPASP  545


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2177  EEKIK  2191
             EEK+K
Sbjct  565   EEKVK  569


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  8514  LEAQEEEEVGFPV  8552
             LEA    EV F V
Sbjct  616   LEA----EVDFTV  624


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  4411  ITKTNYKNSKF  4443
             I K  YK S F
Sbjct  324   ILKISYKRSNF  334


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2014  RYSISR  2031
             RY  SR
Sbjct  424   RYTMSR  429


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  337  WVRER  351
            W RER
Sbjct  532  WERER  536


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3719  IGGNEQVD  3742
             I G+E VD
Sbjct  830   ITGDEDVD  837


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6504  YNVHMELG  6527
             Y V+ ELG
Sbjct  218   YAVQAELG  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6410  ELAQRI  6393
             EL +RI
Sbjct  249   ELEERI  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6919  EKFPSTI  6899
             E F STI
Sbjct  344   EQFESTI  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6791  TLKQIASKL  6817
             TLK+  SKL
Sbjct  517   TLKEPNSKL  525


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3822  TVIGE  3836
             TVIG+
Sbjct  623   TVIGD  627


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8672  KDILSS  8655
             KD+L S
Sbjct  789   KDVLTS  794


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8204  VSLLNA  8221
             V LL+A
Sbjct  101   VTLLDA  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  483  LLETSE  500
            LL+ SE
Sbjct  103  LLDASE  108


>sp|O60674.2|JAK2_HUMAN  RecName: Full=Tyrosine-protein kinase JAK2; AltName: Full=Janus 
kinase 2; Short=JAK-2
Length=1132

 GENE ID: 3717 JAK2 | Janus kinase 2 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = +2

Query  6677  TRKRIR------IQ  6700
             TRKRIR      IQ
Sbjct  225   TRKRIRYRFRRFIQ  238


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 12/32 (37%), Positives = 14/32 (43%), Gaps = 15/32 (46%)
 Frame = +1

Query  6223  RRDKKLLFQY----------QHKHKR*GAERI  6288
             RR+ KL  +Y          Q KHK    ERI
Sbjct  922   RRNLKLIMEYLPYGSLRDYLQ-KHK----ERI  948


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 18/36 (50%)
 Frame = -3

Query  8720  VLLIRE----------VALCVVDPQI------KDIL  8661
             +LLIRE          + L   DP I      KDIL
Sbjct  679   ILLIREEDRKTGNPPFIKLS--DPGISITVLPKDIL  712


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2813  SIYQDG  2796
             SIYQ+G
Sbjct  18    SIYQNG  23


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +3

Query  1038  DIAGTTSTLQEQIGWMTNNPP  1100
             DI      LQE I W    PP
Sbjct  710   DI------LQERIPWV---PP  721


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  5843  LMICSATEKLW  5875
             LM  S TE  W
Sbjct  87    LM--SETERIW  95


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4296  VLRCS  4282
             VLRCS
Sbjct  424   VLRCS  428


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7548  WGFGVAL  7568
             W FGV L
Sbjct  1038  WSFGVVL  1044


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7423  LLHYTRQ  7403
             LL+YT Q
Sbjct  953   LLQYTSQ  959


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1465  IMVAEFV  1445
             I+V EFV
Sbjct  623   ILVQEFV  629


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2011  YRYSISR  2031
             YR  ISR
Sbjct  132   YRHGISR  138


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7593  CLGMLV  7610
             CLGM V
Sbjct  178   CLGMAV  183


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5458  YNSNWYKQF  5432
             YNS  YK F
Sbjct  201   YNSISYKTF  209


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7914  YRFR  7925
             YRFR
Sbjct  231   YRFR  234


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3972  VQSSCH  3955
             +QS CH
Sbjct  396   IQSNCH  401


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4851  ILWRL  4837
             ILW L
Sbjct  647   ILWKL  651


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8284  STSSLY  8267
             STSS Y
Sbjct  15    STSSIY  20


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2915  SLGKSD  2898
             SLGKS+
Sbjct  46    SLGKSE  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/37 (29%), Positives = 11/37 (29%), Gaps = 21/37 (56%)
 Frame = +1

Query  8086  RLTLD-----CNEDCGTSGTQGVGSPQILVESPTVLE  8181
             RLT D     C E                V  P VLE
Sbjct  374   RLTADAHHYLCKE----------------VAPPAVLE  394


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  6263  IRGKVQKEY  6289
             IR K+Q +Y
Sbjct  214   IRAKIQ-DY  221


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  544  QDQKNLD  564
            QD KNL+
Sbjct  347  QDGKNLE  353


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -1

Query  5104  LSSV----SFVTL  5078
             LSS     SFV L
Sbjct  356   LSSLREALSFVSL  368


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4288  MFSLIS  4271
             MF L S
Sbjct  84    MFALMS  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7630  FQRFI  7616
             F RFI
Sbjct  233   FRRFI  237


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6443  ILKCNNKTFN  6472
             +L C  K FN
Sbjct  424   VLRCSPKDFN  433


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7920  NDNGEY  7903
             N+N EY
Sbjct  457   NENEEY  462


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5080  LGKGGF  5063
             LGKG F
Sbjct  855   LGKGNF  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8968  ELATRD  8985
             +LATR+
Sbjct  976   DLATRN  981


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 0/18 (0%)
 Frame = +3

Query  1338  KALGPAATLEEMMTACQG  1391
             K   P A LE     C+G
Sbjct  385   KEVAPPAVLENIQSNCHG  402


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  4863  SFSSILW  4843
             SF   LW
Sbjct  738   SFGTTLW  744


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4559  RRKAKIIRDY  4588
             RR  K I +Y
Sbjct  922   RRNLKLIMEY  931


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2201  EICTEME  2221
             +IC  ME
Sbjct  959   QICKGME  965


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  9001  KSPAESP  8981
             K P ESP
Sbjct  1011  KEPGESP  1017


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1875  QEQMI  1889
             Q QMI
Sbjct  1070  QGQMI  1074


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1686  SEENSLAFP  1660
             SE + L FP
Sbjct  50    SEADYLTFP  58


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4984  VNIKQ  4998
             V IKQ
Sbjct  326   VSIKQ  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8152  ILVE  8163
             ILVE
Sbjct  982   ILVE  985


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2537  VLPQ  2548
             VLPQ
Sbjct  1000  VLPQ  1003


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +2

Query  8096  LIVTRIVELL---GR  8131
             +IV   +ELL   GR
Sbjct  1073  MIVFHLIELLKNNGR  1087


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  846  MFSALSE  866
            MF  +SE
Sbjct  84   MFALMSE  90


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6408  FPYII  6422
             FP II
Sbjct  320   FPNII  324


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1637  REDLAF  1654
             RE L F
Sbjct  360   REALSF  365


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8456  FQVSRCC  8436
             FQ   CC
Sbjct  493   FQFTKCC  499


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3100  PMDISNL  3120
             P D SNL
Sbjct  503   PKDKSNL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1192  DKDQRN  1209
             DK +RN
Sbjct  584   DKAHRN  589


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6607  VREIDR  6590
             +RE DR
Sbjct  682   IREEDR  687


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3353  PPLVKL  3370
             PP +KL
Sbjct  692   PPFIKL  697


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9092  RDPVQ  9078
             RDP Q
Sbjct  839   RDPTQ  843


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6619  HNSTAEH  6639
             + ST EH
Sbjct  885   QHSTEEH  891


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3168  LILAYFP  3148
             LI+ Y P
Sbjct  927   LIMEYLP  933


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1299  LVQNAN  1316
             LV+N N
Sbjct  983   LVENEN  988


>ref|NP_003812.1|  receptor-interacting serine/threonine-protein kinase 2 [Homo 
sapiens]
Length=540

 GENE ID: 8767 RIPK2 | receptor-interacting serine-threonine kinase 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -3

Query  7655  SRSCDSKSVPE----IY  7617
             SRS  SKS PE    IY
Sbjct  178   SRS--SKSAPEGGTIIY  192


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 13/30 (43%)
 Frame = +2

Query  9005  REAWPGRDWGVASPQILHIS--SCFLPVLG  9088
             REA           +ILH    S  LP+LG
Sbjct  65    REA-----------EILHKARFSYILPILG  83


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7066  FSYFLP  7049
             FSY LP
Sbjct  75    FSYILP  80


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/32 (37%), Positives = 12/32 (37%), Gaps = 14/32 (43%)
 Frame = +2

Query  3629  QSESE-LVNQIIE----Q---------LIKKE  3682
             QS  E  VNQ  E    Q         LI KE
Sbjct  441   QSKREDIVNQMTEACLNQSLDALLSRDLIMKE  472


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3188  VKQLTEA  3208
             V Q+TEA
Sbjct  448   VNQMTEA  454


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 9/18 (50%)
 Frame = +1

Query  4990  IKQDITR*DLYN----TW  5031
             IK+DI     Y     TW
Sbjct  208   IKHDI-----YSYAVITW  220


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 3/18 (16%)
 Frame = +2

Query  6065  DMVEQMHEDIISLWDQSL  6118
             D V QM E    L +QSL
Sbjct  446   DIVNQMTEA--CL-NQSL  460


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4975  ALGVN  4989
             ALGVN
Sbjct  129   ALGVN  133


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -1

Query  7588  SGANEFSRATPNPQE  7544
             SG  E SR  P PQ+
Sbjct  355   SGSPETSRSLPAPQD  369


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5994  TQACVAQTL  5968
             T+AC  Q L
Sbjct  452   TEACLNQSL  460


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  1540  AVCPSLPQLKHLTI  1499
             A+C  LP     TI
Sbjct  5     AICSALP-----TI  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  6831  PNCSLN-LL  6808
             PN SLN LL
Sbjct  99    PNGSLNELL  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3824  SNWRAM  3841
             S WR M
Sbjct  168   SKWRMM  173


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  948  INEE  959
            INEE
Sbjct  250  INEE  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3506  DTTNQKTE  3529
             D  NQ TE
Sbjct  446   DIVNQMTE  453


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5500  ALGISY  5517
             ALG+ Y
Sbjct  129   ALGVNY  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  4743  NLFLDEGFH  4717
             N  LD  FH
Sbjct  151   NILLDNEFH  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3788  FHLKI  3774
             FH KI
Sbjct  158   FHVKI  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4035  SASIYPLAT  4009
             SA I PL T
Sbjct  416   SAIINPLST  424


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6255  LILKE  6241
             LI+KE
Sbjct  468   LIMKE  472


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2600  LRFLS  2586
             LR+LS
Sbjct  21    LRYLS  25


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1401  PGHKAR  1418
             PG+K R
Sbjct  200   PGQKSR  205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2558  LSIPV  2544
             L IPV
Sbjct  333   LNIPV  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2604  LLENK  2618
             LL+NK
Sbjct  534   LLQNK  538


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4176  ESSRNL  4193
             E SR L
Sbjct  359   ETSRSL  364


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6010  PTRSS  6024
             PTR S
Sbjct  481   PTRTS  485


>pdb|1HSA|A  Chain A, The Three-Dimensional Structure Of Hla-B27 At 2.1 Angstroms 
Resolution Suggests A General Mechanism For Tight Peptide 
Binding To Mhc
 pdb|1HSA|D  Chain D, The Three-Dimensional Structure Of Hla-B27 At 2.1 Angstroms 
Resolution Suggests A General Mechanism For Tight Peptide 
Binding To Mhc
 pdb|1JGE|A  Chain A, Hla-B2705 Bound To Nona-Peptide M9
 8 more sequence titles
 pdb|1OGT|A  Chain A, Crystal Structure Of Hla-B2705 Complexed With The Vasoactive 
Intestinal Peptide Type 1 Receptor (Vipr) Peptide (Residues 
400-408)
 pdb|1W0V|A  Chain A, Crystal Structure Of Hla-B2705 Complexed With The Self- 
Peptide Tis From Egf-Response Factor 1
 pdb|2BST|A  Chain A, Crystal Structures And Kir3dl1 Recognition Of Three 
Immunodominant Viral Peptides Complexed To Hla-B2705
 pdb|2A83|A  Chain A, Crystal Structure Of Hla-B2705 Complexed With The Glucagon 
Receptor (Gr) Peptide (Residues 412-420)
 pdb|3B6S|A  Chain A, Crystal Structure Of Hla-B2705 Complexed With The Citrullinated 
Vasoactive Intestinal Peptide Type 1 Receptor (Vipr) 
Peptide (Residues 400-408)
 pdb|3BP4|A  Chain A, The High Resolution Crystal Structure Of Hla-B2705 In 
Complex With A Cathepsin A Signal Sequence Peptide Pcata
 pdb|3DTX|A  Chain A, Crystal Structure Of Hla-B2705 Complexed With The Double 
Citrullinated Vasoactive Intestinal Peptide Type 1 Receptor 
(Vipr) Peptide (Residues 400-408)
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  540  QTGSEELRSL---YN  575
            QT  E+LR L   YN
Sbjct  72   QTDREDLRTLLRYYN  86


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  51    WIEQEGPEYWDRE  63


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  22    FITVGY  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DLR L
Sbjct  76    EDLRTL  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  11    SVSRPGRGE  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


>ref|NP_647537.1|  attractin isoform 1 [Homo sapiens]
 sp|O75882.2|ATRN_HUMAN  RecName: Full=Attractin; AltName: Full=Mahogany homolog; AltName: 
Full=DPPT-L; Flags: Precursor
Length=1429

 GENE ID: 8455 ATRN | attractin [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1159  ECIALP  1176
             ECIALP
Sbjct  779   ECIALP  784


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +1

Query  7273  KEKSGAERKKSSGNR  7317
             KEKSGA R     NR
Sbjct  1408  KEKSGAVR-----NR  1417


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 14/39 (35%)
 Frame = +3

Query  423   KLKHIVWAS-------RELE----R-FA-VNPGLLETSE  500
             K K+  WAS       RE++    R FA VN   LET E
Sbjct  1302  KIKQSCWASRRREQLLREMQQMASRPFASVNVA-LETDE  1339


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = -3

Query  992  MHWMHSIP----FCSFL  954
            ++WM S P    FC  L
Sbjct  880  LQWMPSEPSDAGFCGIL  896


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 9/26 (34%)
 Frame = -2

Query  3603  NAY--------C-ESVTMFTSNPESC  3553
             NAY        C E  TM T  PE C
Sbjct  962   NAYVASFPFGQCMEWYTMSTCPPENC  987


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6885  TISGSPPEDC  6856
             T S  PPE+C
Sbjct  978   TMSTCPPENC  987


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  2594  FLSCYFGILLV  2562
             F SC+   LLV
Sbjct  1286  FFSCFLSLLLV  1296


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1007  CNRPC  993
             C+RPC
Sbjct  101   CDRPC  105


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 7/20 (35%)
 Frame = -1

Query  7120  CNI**TSNLSTDGRGIHCFS  7061
             CN       S D RG  CFS
Sbjct  299   CN-------SSDVRGCSCFS  311


 Score = 18.0 bits (35),  Expect(2) =  6777
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8963  TSSLLQ  8980
             T SLLQ
Sbjct  876   TNSLLQ  881


 Score = 15.9 bits (30),  Expect(2) =  6777
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  9040  EPSD  9051
             EPSD
Sbjct  886   EPSD  889


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4969  MCPN  4958
             MCPN
Sbjct  249   MCPN  252


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1533  HTARNCRAP  1559
             H A  CR P
Sbjct  924   HSAKQCRTP  932


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = +1

Query  6547  AVKW---QS---SRRR  6576
             AV W   QS   SRRR
Sbjct  1298  AVVWKIKQSCWASRRR  1313


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -3

Query  6410  ELAQR--IPLDRPV  6375
             +LA R   PL+R V
Sbjct  373   DLASREWLPLNRSV  386


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  5958  VSYALASDAQ  5929
             +S ALA D Q
Sbjct  676   ISWALATDEQ  685


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7478  VWGIKQ  7495
             VW IKQ
Sbjct  1300  VWKIKQ  1305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7474  ELQQM  7460
             E+QQM
Sbjct  1319  EMQQM  1323


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7952  RVPSGLGG  7929
             R P GLGG
Sbjct  1374  RLPRGLGG  1381


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8537  LLLLL  8523
             LLLLL
Sbjct  61    LLLLL  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1444  TWLI  1433
             TWLI
Sbjct  159   TWLI  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2404  KISNS  2418
             KISNS
Sbjct  261   KISNS  265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3037  TWSVL  3051
             TWS+L
Sbjct  486   TWSIL  490


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  5231  LSHGAK  5214
             +SHGAK
Sbjct  579   MSHGAK  584


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6496  QHSTMY  6513
             + STMY
Sbjct  622   HNSTMY  627


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3810  CSSWAL  3793
             C SWAL
Sbjct  675   CISWAL  680


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SEG+IS
Sbjct  735   SEGQIS  740


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5893  GTCVEGS  5913
             G C+EGS
Sbjct  1014  GKCIEGS  1020


 Score = 16.3 bits (31),  Expect(2) = 16396
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3658  NRAVN  3672
             NR VN
Sbjct  383   NRSVN  387


 Score = 15.5 bits (29),  Expect(2) = 16396
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3677  KEKVYL  3694
             K+K+Y+
Sbjct  401   KDKIYM  406


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  329  ERDGCESV  352
            ERDG E V
Sbjct  209  ERDGNETV  216


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4502  WKGE  4513
             WKGE
Sbjct  277   WKGE  280


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1370  NDDSMS  1387
             ND SMS
Sbjct  575   NDTSMS  580


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/29 (34%), Positives = 11/29 (37%), Gaps = 12/29 (41%)
 Frame = -3

Query  1433  CFSQNSCLMAGSSYSLTCCHHFF*CSRWS  1347
             CFS +   MA   Y          C RWS
Sbjct  585   CFSSD--FMA---YDIA-------CDRWS  601


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  5123  DQGPQREPHNE  5155
             DQ  Q EP N+
Sbjct  768   DQNCQWEPRNQ  778


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +1

Query  4411  IT--KTNYKNSK  4440
             IT  K NY N K
Sbjct  802   ITTAKENYDNAK  813


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1609  SFIWCP  1592
             SFI CP
Sbjct  1056  SFIHCP  1061


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/22 (36%), Positives = 8/22 (36%), Gaps = 7/22 (31%)
 Frame = +1

Query  5971  CLGHTCLCTHRPQPTRSSIGKC  6036
             C GH  LC           GKC
Sbjct  1111  CNGHASLCN-------TNTGKC  1125


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3154  FSCF  3143
             FSCF
Sbjct  1287  FSCF  1290


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  2141  FLALILLV  2118
             FL L LLV
Sbjct  1290  FLSL-LLV  1296


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5516  MAGRSG  5533
             +AGRSG
Sbjct  22    LAGRSG  27


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6475  NRTMY  6489
             N TMY
Sbjct  623   NSTMY  627


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4850  FYGD  4839
             FYGD
Sbjct  1096  FYGD  1099


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4906  ISWSAS  4889
             I W AS
Sbjct  1207  ITWAAS  1212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7214  ELYKYKV  7234
             +LY Y V
Sbjct  533   DLYRYDV  539


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6858  CLKI  6847
             CLKI
Sbjct  799   CLKI  802


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5498  FVMKQ  5484
             FV+KQ
Sbjct  834   FVLKQ  838


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1428  EAMSQVTNS  1454
             E MS  TNS
Sbjct  870   EDMSPFTNS  878


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8022  PFTN  8011
             PFTN
Sbjct  874   PFTN  877


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6179  HSSNQC  6162
             HS  QC
Sbjct  924   HSAKQC  929


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3137  NLKTGK  3154
             NL TGK
Sbjct  1082  NLTTGK  1087


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = -1

Query  7462  MLLRLNSPQQIVLLL  7418
             +LL L SP    LLL
Sbjct  63    LLLLLLSPPLLLLLL  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5433  FRLT  5422
             FRLT
Sbjct  136   FRLT  139


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  8752  SGYLTPGPG  8726
             SG+ T GPG
Sbjct  142   SGFVTDGPG  150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6032  NVTENFNM  6055
             N+T  F+M
Sbjct  242   NITYSFDM  249


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3358  LSEIMV  3375
             LS+I+V
Sbjct  637   LSDILV  642


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5719  FFVLIFS  5699
             FFV  FS
Sbjct  1282  FFVTFFS  1288


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  753  PGCS  742
            PGCS
Sbjct  316  PGCS  319


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2420  VLLLIF  2403
             V+L IF
Sbjct  460   VMLVIF  465


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8730  GPGVR  8744
             GPG+R
Sbjct  661   GPGIR  665


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6694  TDSFSC  6677
             TD +SC
Sbjct  708   TDCYSC  713


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  786  TLNAWV  803
            TL  WV
Sbjct  852  TLTPWV  857


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3622  LCLNDS  3605
             +CL DS
Sbjct  1046  MCLEDS  1051


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4000  YQDNFS  3983
             Y D FS
Sbjct  1234  YKDSFS  1239


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8028  KDPFTN  8011
             KD F N
Sbjct  1235  KDSFSN  1240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8274  ELVELFATY  8300
             +LV+ F T+
Sbjct  1278  DLVQFFVTF  1286


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2767  FFLMFF  2750
             FF  FF
Sbjct  1282  FFVTFF  1287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  271  RRGAAT  288
            RR AAT
Sbjct  14   RRTAAT  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9006  GRRGLG  9023
             GR GLG
Sbjct  39    GRPGLG  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6774  LLMLQC  6757
             LL+L C
Sbjct  74    LLLLPC  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8558  RCDWKT  8541
             RC W T
Sbjct  665   RCVWNT  670


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  263  CALQQ  249
            CAL Q
Sbjct  765  CALDQ  769


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2825  IVLPE  2839
             I LPE
Sbjct  781   IALPE  785


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2482  CSILPE  2465
             C IL E
Sbjct  893   CGILSE  898


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6784  PFCSTNV  6764
             PF S NV
Sbjct  1327  PFASVNV  1333


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1946  IGGFIK  1963
             IGG IK
Sbjct  1345  IGGSIK  1350


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  465   IVLAPC  448
             I L PC
Sbjct  1356  IALEPC  1361


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = +3

Query  5907  RKQ-PP  5921
             RKQ PP
Sbjct  1417  RKQQPP  1422


>pdb|1IGA|C  Chain C, Model Of Human Iga1 Determined By Solution Scattering 
Curve- Fitting And Homology Modelling
 pdb|1IGA|D  Chain D, Model Of Human Iga1 Determined By Solution Scattering 
Curve- Fitting And Homology Modelling
 16 more sequence titles
 pdb|1R70|A  Chain A, Model Of Human Iga2 Determined By Solution Scattering, 
Curve Fitting And Homology Modelling
 pdb|1R70|C  Chain C, Model Of Human Iga2 Determined By Solution Scattering, 
Curve Fitting And Homology Modelling
 pdb|2ESG|L  Chain L, Solution Structure Of The Complex Between Immunoglobulin 
Iga1 And Human Serum Albumin
 pdb|2ESG|M  Chain M, Solution Structure Of The Complex Between Immunoglobulin 
Iga1 And Human Serum Albumin
 pdb|2QTJ|L  Chain L, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|2QTJ|M  Chain M, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|2QTJ|N  Chain N, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|2QTJ|O  Chain O, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|3CHN|L  Chain L, Solution Structure Of Human Secretory Iga1
 pdb|3CHN|M  Chain M, Solution Structure Of Human Secretory Iga1
 pdb|3CHN|N  Chain N, Solution Structure Of Human Secretory Iga1
 pdb|3CHN|O  Chain O, Solution Structure Of Human Secretory Iga1
 pdb|3CM9|L  Chain L, Solution Structure Of Human Siga2
 pdb|3CM9|M  Chain M, Solution Structure Of Human Siga2
 pdb|3CM9|N  Chain N, Solution Structure Of Human Siga2
 pdb|3CM9|O  Chain O, Solution Structure Of Human Siga2
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPLTFG
Sbjct  94    YPLTFG  99


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = -3

Query  8195  SLVPDSNTVGDSTNI  8151
             SL   S  VGD  NI
Sbjct  10    SL---SASVGDRVNI  21


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4065  VSCPVSAGITSA  4030
             + C  S GI SA
Sbjct  21    IACRASQGISSA  32


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>pdb|3CCK|A  Chain A, Human Cd69
 pdb|3CCK|B  Chain B, Human Cd69
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7781  NWFNIT  7798
             NWFN+T
Sbjct  82    NWFNVT  87


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  4033  CFYIST  4016
             C++IST
Sbjct  15    CYFIST  20


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3387  FSNWY  3373
             F NW+
Sbjct  80    FNNWF  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3693  WHGYQ  3707
             W GYQ
Sbjct  8     WVGYQ  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2920  FNPWVNLT  2897
             FN W N T
Sbjct  80    FNNWFNVT  87


>sp|Q04826.1|1B40_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-40 alpha 
chain; AltName: Full=MHC class I antigen B*40; AltName: 
Full=Bw-60; Flags: Precursor
Length=362

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4173  RESSRNL  4193
             RES RNL
Sbjct  99    RESLRNL  105


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2939  LLRGTKALTE  2968
             LL G  ALTE
Sbjct  12    LLWGAVALTE  21


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  3113  QIYQEPFKNL  3142
             Q Y E   NL
Sbjct  96    QTYRESLRNL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  35    SVSRPGRGE  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 9/21 (42%)
 Frame = +2

Query  4421  QITKI--Q-------NFRVYY  4456
             QI K   Q       N R YY
Sbjct  89    QISKTNTQTYRESLRNLRGYY  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2022  TVPI  2011
             TVPI
Sbjct  305   TVPI  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  8724  CSSANQGS--SL  8695
             CS   QGS  SL
Sbjct  349   CSDSAQGSDVSL  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3494  VTLTDT  3511
             V LT+T
Sbjct  17    VALTET  22


>pdb|1DR9|A  Chain A, Crystal Structure Of A Soluble Form Of B7-1 (Cd80)
Length=201


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1644  IWPSYKGR  1667
             IWP YK R
Sbjct  49    IWPEYKNR  56


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5394  RIYW  5383
             RIYW
Sbjct  29    RIYW  32


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1505  NNLSLV  1488
             NNLS V
Sbjct  63    NNLSIV  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  579  VATLYCVH  602
            VATL C H
Sbjct  11   VATLSCGH  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  482  PVRNIRR  502
            P  NIRR
Sbjct  119  PTSNIRR  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  158  VSVENL  175
            VSVE L
Sbjct  20   VSVEEL  25


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1100  RWIIC  1086
             R IIC
Sbjct  124   RRIIC  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3231  LSVVI  3217
             LS+VI
Sbjct  65    LSIVI  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  193  QGPESE  210
            Q PE E
Sbjct  157  QDPETE  162


>pdb|3F21|A  Chain A, Crystal Structure Of Zalpha In Complex With D(Cacgtg)
 pdb|3F21|B  Chain B, Crystal Structure Of Zalpha In Complex With D(Cacgtg)
 pdb|3F21|C  Chain C, Crystal Structure Of Zalpha In Complex With D(Cacgtg)
 pdb|3F22|A  Chain A, Crystal Structure Of Zalpha In Complex With D(Cgtacg)
 pdb|3F22|B  Chain B, Crystal Structure Of Zalpha In Complex With D(Cgtacg)
 pdb|3F22|C  Chain C, Crystal Structure Of Zalpha In Complex With D(Cgtacg)
 pdb|3F23|A  Chain A, Crystal Structure Of Zalpha In Complex With D(Cggccg)
 pdb|3F23|B  Chain B, Crystal Structure Of Zalpha In Complex With D(Cggccg)
 pdb|3F23|C  Chain C, Crystal Structure Of Zalpha In Complex With D(Cggccg)
Length=81


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2816  LSIYQD  2799
             LSIYQD
Sbjct  5     LSIYQD  10


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6269  GKVQKE  6286
             GK QKE
Sbjct  55    GKLQKE  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2580  LWNIA  2566
             LW IA
Sbjct  66    LWKIA  70


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2226  KGKFQK  2243
             KGK QK
Sbjct  54    KGKLQK  59


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -2

Query  8298  MWRIAL--QA  8275
             +W IA   QA
Sbjct  66    LWKIAVSTQA  75


>ref|NP_073737.1|  E3 ubiquitin-protein ligase MARCH7 [Homo sapiens]
 sp|Q9H992.1|MARH7_HUMAN  RecName: Full=E3 ubiquitin-protein ligase MARCH7; AltName: Full=Membrane-associated 
RING finger protein 7; AltName: Full=Membrane-associated 
RING-CH protein VII; Short=MARCH-VII; AltName: 
Full=RING finger protein 177; AltName: Full=Axotrophin
Length=704

 GENE ID: 64844 MARCH7 | membrane-associated ring finger (C3HC4) 7
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  5860  STTDHQHPKEH  5828
             S T+HQ P EH
Sbjct  199   SSTNHQLPSEH  209


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5428  PKTACTNC  5451
             PK  CTNC
Sbjct  92    PKLSCTNC  99


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4457  RDSRNPL  4477
             RDSRN L
Sbjct  216   RDSRNSL  222


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  8458  FSRSRDAAPTLS  8423
             +S SRD AP  S
Sbjct  244   YSSSRDEAPIIS  255


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8297  IPRRI  8311
             IPRRI
Sbjct  8     IPRRI  12


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8990  RWGLS  9004
             RWGLS
Sbjct  354   RWGLS  358


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  4613  NHHLPS  4596
             NH+LPS
Sbjct  202   NHQLPS  207


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8514  LEAQEEEE  8537
             LE  EEEE
Sbjct  541   LEDSEEEE  548


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6361  VTTCQL  6344
             VTTC+L
Sbjct  601   VTTCEL  606


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = +1

Query  2173  DRRKNKSISRNL  2208
             +RR + SIS NL
Sbjct  147   ERRTDSSIS-NL  157


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/25 (32%), Positives = 9/25 (36%), Gaps = 14/25 (56%)
 Frame = -3

Query  545  CLKGWL*LSQYLSTAF*CF*QARIN  471
            C+K WL              QA IN
Sbjct  583  CMKKWL--------------QAKIN  593


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1382  MSGSR  1396
             MSGSR
Sbjct  25    MSGSR  29


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8978  VASSMS  8961
             +ASSMS
Sbjct  286   IASSMS  291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6449  LESQNQP  6429
             LE QN P
Sbjct  434   LEAQNDP  440


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  462  RFAVNPGL  485
            RFAV P L
Sbjct  485  RFAVPPAL  492


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5013  GSLQY  5027
             GSLQY
Sbjct  574   GSLQY  578


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6629  QLNTS  6643
             QLNTS
Sbjct  195   QLNTS  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4491  AGPFQS  4474
             A PFQS
Sbjct  59    ASPFQS  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9040  RHSPVP  9023
             RHS VP
Sbjct  120   RHSQVP  125


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  2708  LRQHLLRWGL  2737
             LR    RWGL
Sbjct  351   LRR---RWGL  357


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3911  LADIYHS  3891
             L D YHS
Sbjct  33    LNDTYHS  39


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2734  TYHTR  2748
             TYH R
Sbjct  36    TYHSR  40


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  774  ISPRTLNA  797
            +SPR L A
Sbjct  316  VSPRILTA  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  290  VSTPKILT  313
            VS P ILT
Sbjct  316  VS-PRILT  322


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6041  ENFN  6052
             ENFN
Sbjct  371   ENFN  374


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5690  MITMD  5676
             MIT D
Sbjct  501   MITVD  505


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  1868  LDTGADDTVLEE  1903
             L+T  DD   EE
Sbjct  684   LETSEDDS--EE  693


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 22/40 (55%)
 Frame = -1

Query  991  CTGC-------------TLS-----HSAA--SSLMV--SF  938
            CT C             TLS     HS    SS MV  SF
Sbjct  96   CTNCTTSAGRNVGNGLNTLSDSSWRHSQVPRSSSMVLGSF  135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  5909  PS-TQVPHNR  5883
             PS  +VP NR
Sbjct  331   PSASEVPDNR  340


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4512  SPFQ  4501
             SPFQ
Sbjct  60    SPFQ  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1017  MREPR  1031
             MRE R
Sbjct  140   MRERR  144


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8445  RDLE  8456
             RDLE
Sbjct  144   RDLE  147


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4376  VDII  4387
             VDII
Sbjct  504   VDII  507


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = +2

Query  1838  KIGGQLKEALL  1870
             KI    KE LL
Sbjct  534   KI----KESLL  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8329  PFQALSYS  8306
             PFQ   YS
Sbjct  61    PFQSAWYS  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2327  RELNKRT  2347
             R+L  RT
Sbjct  144   RDLERRT  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7189  SSSRSE  7172
             SSSR E
Sbjct  245   SSSRDE  250


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6526  ASSINST  6546
             ASS  ST
Sbjct  287   ASSMSST  293


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6928  ITVEKFPS  6905
             ITV+  PS
Sbjct  502   ITVDIIPS  509


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1433  NEPS  1444
             NEPS
Sbjct  662   NEPS  665


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9064  AYMQDL  9047
             A M+DL
Sbjct  679   AHMEDL  684


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7522  FHSQDS  7505
             +HS DS
Sbjct  37    YHSRDS  42


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5911  SNHHSIL  5931
             S H+ IL
Sbjct  207   SEHQTIL  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1037  TSPWFS  1020
             T PW S
Sbjct  382   TGPWLS  387


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6789  LFHFA  6775
             LF FA
Sbjct  483   LFRFA  487


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1273  TSCEAC  1256
             T CE C
Sbjct  602   TTCELC  607


>ref|NP_055215.2|  ly6/PLAUR domain-containing protein 3 precursor [Homo sapiens]
 6 more sequence titles
 emb|CAA11469.2|  hypothetical protein [Homo sapiens]
Length=346

 GENE ID: 27076 LYPD3 | LY6/PLAUR domain containing 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  876  GWLLLIML  853
            GWLLL +L
Sbjct  17   GWLLLLLL  24


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1766  LLLLRG  1749
             LLLLRG
Sbjct  21    LLLLRG  26


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8996  GLSREA  9013
             GLSREA
Sbjct  145   GLSREA  150


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2805  INGQYSL  2825
             I GQ+SL
Sbjct  71    IHGQFSL  77


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3353  PPLVKL  3370
             PPLV L
Sbjct  236   PPLVRL  241


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1699  QQPHQK  1716
             QQPH K
Sbjct  319   QQPHNK  324


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +1

Query  967   NGIECIQCMQGL  1002
             NG+EC  C  GL
Sbjct  136   NGVECYSCV-GL  146


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  4134  ISPVLRLGPP  4163
             I P  RL PP
Sbjct  235   IPPLVRLPPP  244


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  286  SPPLASC  266
            SPP  SC
Sbjct  155  SPPVVSC  161


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6585  ITTSSSA  6565
             +TTS SA
Sbjct  255   VTTSTSA  261


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 7/21 (33%)
 Frame = +1

Query  5737  DR------LIERAED-SGNES  5778
             DR      L  RA D  GNES
Sbjct  111   DRCNAKLNLTSRALDPAGNES  131


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7014  VIVSLP  6997
             V VSLP
Sbjct  184   VTVSLP  189


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  3935  VDCSPGIWQLD-CT  3973
             V C PG+   D CT
Sbjct  52    VKCAPGV---DVCT  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9116  QAQIW  9102
             QA IW
Sbjct  10    QAMIW  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  31  QAQIW  17
           QA IW
Sbjct  10  QAMIW  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1692  PEPT  1703
             PEPT
Sbjct  244   PEPT  247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -2

Query  4353  PPIPPFLLKL  4324
             P IPP L  L
Sbjct  233   PRIPP-LVRL  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5983  CGPNIM  5966
             C PN M
Sbjct  44    CSPNKM  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9103  GLTRE  9089
             GL RE
Sbjct  145   GLSRE  149


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  18   GLTRE  4
            GL RE
Sbjct  145  GLSRE  149


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1810  SDLR  1799
             SDLR
Sbjct  223   SDLR  226


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8136  PLRPRSST  8113
             P RP S T
Sbjct  262   PVRPTSTT  269


>ref|NP_071898.2|  E3 ubiquitin-protein ligase RNF25 [Homo sapiens]
Length=459

 GENE ID: 64320 RNF25 | ring finger protein 25 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2256  IHTILQ  2273
             IHTILQ
Sbjct  94    IHTILQ  99


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = -3

Query  2780  KGMEVLSD--------VFCL  2745
             KG E+L D        V CL
Sbjct  120   KGKEILTDNNIPHGQCVICL  139


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  1583  W---KGRTP  1600
             W   KGRTP
Sbjct  420   WERSKGRTP  428


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4670  YVCF  4681
             YVCF
Sbjct  61    YVCF  64


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4208  PQSQGV  4225
             P+SQGV
Sbjct  389   PHSQGV  394


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  264  RQEARGG  284
            RQ+ RGG
Sbjct  244  RQQERGG  250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 4/16 (25%)
 Frame = -1

Query  4810  PVCR-PQYVVITNLAS  4766
             PVCR P    + +LAS
Sbjct  199   PVCREP---LVYDLAS  211


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1924  PSSWQ  1910
             P SWQ
Sbjct  403   PGSWQ  407


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1408  WPGPP  1394
             W GPP
Sbjct  406   WQGPP  410


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4807  QEKE  4818
             QEKE
Sbjct  143   QEKE  146


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6678  QEKE  6689
             QEKE
Sbjct  143   QEKE  146


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6498  AQYNVHME  6521
             A Y  HME
Sbjct  163   ARYIQHME  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  7564  ATPNPQ---EL  7541
             A P PQ   EL
Sbjct  214   AAPEPQQPMEL  224


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7269  RQREE  7283
             RQ EE
Sbjct  233   RQQEE  237


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1095  PPIPV  1109
             PP PV
Sbjct  306   PPLPV  310


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7064  KAMYAPP  7084
             KAM  PP
Sbjct  334   KAMLDPP  340


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8765  PSKGQW  8748
             PS G W
Sbjct  342   PSRGPW  347


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3595  ICIRN  3609
             I IRN
Sbjct  81    ISIRN  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1535  HSQKLQGP  1558
             HSQ  +GP
Sbjct  390   HSQGVEGP  397


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1019  ERTKG  1033
             ER KG
Sbjct  421   ERSKG  425


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7180  RSEDLGL  7160
             R E LGL
Sbjct  447   RRESLGL  453


>ref|NP_004082.1|  transcription factor E2F2 [Homo sapiens]
Length=437

 GENE ID: 1870 E2F2 | E2F transcription factor 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 7/17 (41%)
 Frame = -1

Query  1054  VVPAMSLP--LGSLIWP  1010
             VVPAMS P  L    WP
Sbjct  18    VVPAMS-PTEL----WP  29


 Score = 21.8 bits (44),  Expect =   981
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 6/21 (28%)
 Frame = -3

Query  9038  PLPSPAQATPPWKVPSGKSLV  8976
             P P P QA PP   P   SLV
Sbjct  352   PAPTPQQAPPP---P---SLV  366


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5988  PVYPQT  6005
             P YPQT
Sbjct  47    PLYPQT  52


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5821  PSPPPSPQ  5798
             P P P PQ
Sbjct  350   PAPAPTPQ  357


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 11/29 (37%)
 Frame = +1

Query  8416  QQQIGWEQHLETWK---NMEQSQVAIQQL  8493
             QQQ G  Q L   K   N EQ   A  QL
Sbjct  207   QQQLG--QEL---KELMNTEQ---ALDQL  227


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7775  NLPIYL  7758
             NL IYL
Sbjct  286   NLQIYL  291


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7559  PKSPG  7545
             PKSPG
Sbjct  121   PKSPG  125


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4794  WGLHTGE  4814
             WGL  GE
Sbjct  414   WGLEAGE  420


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1695  EPTAPPEE  1718
             EP  P EE
Sbjct  309   EPDSPSEE  316


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8998  SPAESPL  8978
             SP E PL
Sbjct  312   SPSEEPL  318


 Score = 16.8 bits (32),  Expect(2) = 26907
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  2372  LIELPRSL  2349
             L ELP  L
Sbjct  374   LLELPHPL  381


 Score = 15.1 bits (28),  Expect(2) = 26907
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2430  PTSSTV  2413
             PT S V
Sbjct  344   PTASSV  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5969  YVPLY  5955
             Y PLY
Sbjct  45    YTPLY  49


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  8793  LAQLVLACS  8767
             L QL+  CS
Sbjct  224   LDQLIQSCS  232


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  7648  DLDGVG  7665
             DL+G+G
Sbjct  90    DLEGIG  95


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  8183  QELKNSAVSLLN  8218
             QELK     L+N
Sbjct  212   QELKE----LMN  219


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  1278  NWMTETLLVQ  1307
             NW  E L VQ
Sbjct  156   NWAAEVLDVQ  165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3191  KQLTE  3205
             K+LTE
Sbjct  236   KHLTE  240


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1745  NSPSE  1759
             +SPSE
Sbjct  311   DSPSE  315


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  9045  GLATPQ  9028
             GL  PQ
Sbjct  31    GLSSPQ  36


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5303  VVAEF  5289
             VV EF
Sbjct  98    VVPEF  102


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4611  SSPAICF-P*SL  4579
             SSP I F P SL
Sbjct  397   SSPLISFSP-SL  407


>pdb|1FNS|A  Chain A, Crystal Structure Of The Von Willebrand Factor (Vwf) 
A1 Domain I546v Mutant In Complex With The Function Blocking 
Fab Nmc4
Length=196


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = +2

Query  2390  GLKKKKSVTVLDVG  2431
             GLKKKK V V  VG
Sbjct  134   GLKKKK-VIVIPVG  146


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  2898  VRFTQGLK  2921
             VR+ QGLK
Sbjct  129   VRYVQGLK  136


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  2193  AFIFSSVN  2170
             AF+ SSV+
Sbjct  168   AFVLSSVD  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5376  FLLSSVE  5356
             F LSSV+
Sbjct  169   FVLSSVD  175


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8404  DELSQQ  8421
             DEL QQ
Sbjct  175   DELEQQ  180


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  589  RVATVLYND  563
            RVA V Y D
Sbjct  46   RVAVVEYHD  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4244  ELKKIIGQV  4270
             EL  I  QV
Sbjct  70    ELRRIASQV  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2384  DVVFLIE  2364
             D VFL +
Sbjct  8     DLVFLLD  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4734  RISSEV  4751
             RI S+V
Sbjct  73    RIASQV  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2471  KYTAFTI  2491
             KYT F I
Sbjct  93    KYTLFQI  99


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  6074  EQMHEDIIS  6100
             EQ  ++I+S
Sbjct  178   EQQRDEIVS  186


>pdb|1A81|A  Chain A, Crystal Structure Of The Tandem Sh2 Domain Of The Syk 
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
 pdb|1A81|C  Chain C, Crystal Structure Of The Tandem Sh2 Domain Of The Syk 
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
 pdb|1A81|E  Chain E, Crystal Structure Of The Tandem Sh2 Domain Of The Syk 
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
 pdb|1A81|G  Chain G, Crystal Structure Of The Tandem Sh2 Domain Of The Syk 
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
 pdb|1A81|I  Chain I, Crystal Structure Of The Tandem Sh2 Domain Of The Syk 
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
 pdb|1A81|K  Chain K, Crystal Structure Of The Tandem Sh2 Domain Of The Syk 
Kinase Bound To A Dually Tyrosine-Phosphorylated Itam
Length=254


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2328  ENLIRE  2345
             ENLIRE
Sbjct  117   ENLIRE  122


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  7571  KLICTTA---VPW  7600
             KLI TTA    PW
Sbjct  148   KLIATTAHEKMPW  160


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  746  VLHYRV  729
            VLHYR+
Sbjct  205  VLHYRI  210


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  4565  KAKIIRDYGKQ  4597
             K   IR+Y KQ
Sbjct  116   KENLIREYVKQ  126


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  744  NIQGQMVHQAI  776
            N QGQ   QAI
Sbjct  129  NLQGQALEQAI  139


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6456  LHFRIAK  6436
             LH+RI K
Sbjct  206   LHYRIDK  212


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -1

Query  7522  FHSQDS----CL  7499
             +HSQ+S    CL
Sbjct  83    YHSQESDGLVCL  94


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2349  KTSGKF  2366
             KT GKF
Sbjct  179   KTNGKF  184


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  344  RTHLSPSSL  318
            RTH SP  L
Sbjct  72   RTHASPADL  80


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5489  KQTW  5478
             KQTW
Sbjct  125   KQTW  128


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  298  RTHQSP  281
            RTH SP
Sbjct  72   RTHASP  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6217  HYHS  6206
             HYHS
Sbjct  82    HYHS  85


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/18 (33%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  2702  EELRQHLLR------WGL  2737
             E+L + L R      W L
Sbjct  113   EDLKENLIREYVKQTWNL  130


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1063  RVLVVP  1046
             RVL VP
Sbjct  245   RVLTVP  250


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1736  RDNN  1747
             RDNN
Sbjct  189   RDNN  192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7438  QQIVL  7424
             +QIVL
Sbjct  171   EQIVL  175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2539  HIVLI  2525
             +IVLI
Sbjct  172   QIVLI  176


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  379  DGKKF  393
            +GKKF
Sbjct  222  EGKKF  226


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1570  PFFLG  1556
             PFF G
Sbjct  6     PFFFG  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  121  HNRRAH  104
            H R AH
Sbjct  49   HGRKAH  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3128  PFKNLK  3145
             PF +LK
Sbjct  111   PFEDLK  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4198  NSKFL  4184
             N KFL
Sbjct  181   NGKFL  185


>ref|NP_072092.2|  C-type lectin domain family 7 member A isoform b [Homo sapiens]
Length=201

 GENE ID: 64581 CLEC7A | C-type lectin domain family 7, member A [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 9/12 (75%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -3

Query  2576  GIL-LVILSIPV  2544
             GIL LVIL I V
Sbjct  51    GILCLVILVIAV  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4929  NSQSNT  4912
             +SQSNT
Sbjct  21    DSQSNT  26


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  3646  SQSNNR-AV  3669
             SQSN R AV
Sbjct  22    SQSNTRIAV  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 5/19 (26%)
 Frame = +2

Query  2729  W-GLTTPDKKHQKEPPFLW  2782
             W GL  P    Q E P LW
Sbjct  134   WIGLSRP----QTEVPWLW  148


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9017  ATPPW  9003
             A PPW
Sbjct  39    ASPPW  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = -1

Query  4612  II---TCHLFS  4589
             II    C LFS
Sbjct  79    IIYEKSCYLFS  89


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7586  TAVPW  7600
             T VPW
Sbjct  142   TEVPW  146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7590  LCLGMLV  7610
             LCL  LV
Sbjct  53    LCLVILV  59


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  9081  YWVSLVRP  9104
             +W+ L RP
Sbjct  133   FWIGLSRP  140


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1586  STFPTALF  1563
             STF   LF
Sbjct  152   STFSSNLF  159


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7636  NLFQ  7625
             NLFQ
Sbjct  157   NLFQ  160


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  8831  LVTPCEPAW  8857
             L  PC P W
Sbjct  70    LSSPCPPNW  78


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7177  SEDLGLIV  7154
             S +LG IV
Sbjct  115   SNELGFIV  122


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/17 (35%), Positives = 6/17 (35%), Gaps = 10/17 (58%)
 Frame = -3

Query  7442  PSANCSAAALYQTIIVW  7392
             PS NC          VW
Sbjct  170   PSPNC----------VW  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5581  EKLDE  5567
             E LDE
Sbjct  8     ENLDE  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/23 (30%), Positives = 8/23 (34%), Gaps = 10/23 (43%)
 Frame = -3

Query  8732  PW----------CVVLLIREVAL  8694
             PW          C V L+  V L
Sbjct  42    PWRLIAVILGILCLVILVIAVVL  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7760  LIPIIL  7743
             LI +IL
Sbjct  45    LIAVIL  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  7143  VVIATM----SP  7166
             VV  TM    SP
Sbjct  62    VVLGTMGVLSSP  73


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8331  ILSKPC  8314
             +LS PC
Sbjct  69    VLSSPC  74


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  30   WELSG*LGNPLLK  68
            W+    LG  LLK
Sbjct  103  WQ----LGSNLLK  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4308  WQYSSTILK  4334
             WQ  S  LK
Sbjct  103   WQLGSNLLK  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  9115  WELSG*LGNPLLK  9153
             W+    LG  LLK
Sbjct  103   WQ----LGSNLLK  111


>sp|P30485.1|1B47_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-47 alpha 
chain; AltName: Full=MHC class I antigen B*47; AltName: 
Full=Bw-47; Flags: Precursor
Length=362


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 23.1 bits (47),  Expect =   406
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5104  DGTSPRR-PRA  5133
             D TSPR  PRA
Sbjct  63    DATSPRKEPRA  73


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = +2

Query  7652  WME------WDRE  7672
             W E      WDRE
Sbjct  75    WIEQEGPEYWDRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FIT GY
Sbjct  46    FITVGY  51


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  552  EELRSL---YN  575
            E+LR L   YN
Sbjct  100  EDLRTLLRYYN  110


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2939  LLRGTKALTE  2968
             LL G  ALTE
Sbjct  12    LLWGAVALTE  21


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8042  DDLRSL  8059
             +DLR L
Sbjct  100   EDLRTL  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +2

Query  4514  GAVVIQDNSDIKVVPRRK  4567
             GAVV        VV RRK
Sbjct  324   GAVVAA------VVCRRK  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2022  TVPI  2011
             TVPI
Sbjct  305   TVPI  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  8724  CSSANQGS--SL  8695
             CS   QGS  SL
Sbjct  349   CSDSAQGSDVSL  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3494  VTLTDT  3511
             V LT+T
Sbjct  17    VALTET  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  809  YFY  801
            YFY
Sbjct  31   YFY  33


>pdb|3HMW|L  Chain L, Crystal Structure Of Ustekinumab Fab
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   422
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   422
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  8603  KIYSCLVSH  8577
             K+Y C V H
Sbjct  190   KVYACEVTH  198


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/16 (56%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = -2

Query  3783  SKNSTF-LIPALTNLS  3739
             SK+ST+ L   LT LS
Sbjct  168   SKDSTYSLSSTLT-LS  182


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8892  STLTL  8878
             STLTL
Sbjct  177   STLTL  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YP TFG
Sbjct  94    YPYTFG  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  6811  QIKRTI  6828
             +IKRT+
Sbjct  105   EIKRTV  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  418  FFFPP  404
            F FPP
Sbjct  116  FIFPP  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4102  SKNNTY  4119
             SK+ TY
Sbjct  168   SKDSTY  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -1

Query  6043  FCH---IYQYYF  6017
             +C+   IY Y F
Sbjct  87    YCQQYNIYPYTF  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1400  SSYSL  1386
             S YSL
Sbjct  171   STYSL  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VT Q L  PV
Sbjct  196   VTHQGLSSPV  205


>ref|XP_001719515.1|  PREDICTED: similar to complement component C3, partial [Homo 
sapiens]
Length=1295

 GENE ID: 100133511 LOC100133511 | hypothetical protein LOC100133511
[Homo sapiens]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   475
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  442   QALPYST--VGNS  452


 Score = 18.0 bits (35),  Expect(2) =   475
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  446   YS------TVGNSNN  454


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  981   LLQ----GTPVAQM  990


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  162   TVMVNI  167


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  897   PYVIVP  902


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  789   KLMNIFL  795


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  119   KVVLVSLQ--SGY  129


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  212   NSPQQV  217


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  749   SNLDEDI---IAEEN  760


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  773   WNVEDL  778


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  586   EGDHGARVVLVAV  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  826   MQDFFIDL  833


 Score = 17.6 bits (34),  Expect(2) =  8457
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  117  VEKVVLVSL  125


 Score = 15.9 bits (30),  Expect(2) =  8457
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  91   PANRE  95


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL H PL L S
Sbjct  13    LLTHLPLALGS  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  243   YYIYN  247


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  194   DIPELVNMG  202


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  245   IY---NEKGLEVTI  255


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4987  SHLGL  4973
             SHLGL
Sbjct  742   SHLGL  746


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  927  KSLKVVPE  934


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  937   RMNK  940


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  940   KTVAVR  945


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  1120  EDAPVIHQE  1128


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  237   EPTEKFYY  244


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  282   ISLPES  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  353   YQIHFTKTPKY  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  369   PFDLMVFVTNP  379


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  456   LHLSVLRTELRP  467


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  798   SITTWEI  804


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  843   EQVEIRAV  850


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  987   VAQMTED  993


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  70    SSEKTVLTP  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  88    FTIP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  139   YTPGSTVLY  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  425   RTKKQEL  431


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  753   EDII  756


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  767   FPESW  771


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  933   PEGIRMNKTVAVRTLD  948


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  1174  DFLEA  1178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  1238  LALLQL  1243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80    ALLRLK  63
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6041  LSHLP  6027
             L HLP
Sbjct  14    LTHLP  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  202  GQWKIRAY  209


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  489   YYTYLI  494


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  602   VFVLNKK--------------NKLTQSKIWDV  619


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  790   LMNIFL  795


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  816   CVADP  820


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  835  LPYS  838


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  1177  EANYMN  1182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  34    LRLESEETMVL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  74    TVLTPA  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  288   LKRIP  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  342   ERSGIP  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  347   PIVT  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  370   FDLMV  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  492   YLIM  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  517   LPLSI  521


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  528   SFRL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  805   LAVSMSDKKG  814


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  930   KVVPEGIR  937


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  1000  LKHL  1003


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  1087  SLAVNLIAI  1095


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4927  VFQTL  4941
             VFQ L
Sbjct  1275  VFQAL  1279


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  233   EVI-VEPTEKF  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  280   QRISLPE  286


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  280   QRISL  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  314   LRAE  317


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  222  RSSLD  236
            RS LD
Sbjct  748  RSNLD  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372   LD---RWEK  389
             LD    WEK
Sbjct  1028  LDETEQWEK  1036


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  1074  PSTWLT  1079


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  1135  NNNEKDMA  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  1163  NSLPG  1167


>gb|EAW69070.1|  complement component 3, isoform CRA_a [Homo sapiens]
Length=1288

 GENE ID: 718 C3 | complement component 3 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   476
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  442   QALPYST--VGNS  452


 Score = 18.0 bits (35),  Expect(2) =   476
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  446   YS------TVGNSNN  454


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  7617  LLQLAFQGTAVVQM  7576
             LLQ    GT V QM
Sbjct  981   LLQ----GTPVAQM  990


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  162   TVMVNI  167


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6411  PYIIVP  6428
             PY+IVP
Sbjct  897   PYVIVP  902


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5190  KLLDIFL  5210
             KL++IFL
Sbjct  789   KLMNIFL  795


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  119   KVVLVSLQ--SGY  129


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  212   NSPQQV  217


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 3/15 (20%)
 Frame = +3

Query  7173  SDLEEEI*GTIGEVN  7217
             S+L+E+I   I E N
Sbjct  749   SNLDEDI---IAEEN  760


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W+V+DL
Sbjct  773   WNVEDL  778


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2801  DGVHNP  2784
             DGV+NP
Sbjct  309   DGVQNP  314


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  586   EGDHGARVVLVAV  598


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6288  MH-FFINL  6308
             M+ FFI+L
Sbjct  826   MQDFFIDL  833


 Score = 17.6 bits (34),  Expect(2) =  8475
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  117  VEKVVLVSL  125


 Score = 15.9 bits (30),  Expect(2) =  8475
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  91   PANRE  95


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  1047  LLCHFPLVLSS  1015
             LL H PL L S
Sbjct  13    LLTHLPLALGS  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  243   YYIYN  247


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  194   DIPELVNMG  202


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  245   IY---NEKGLEVTI  255


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4987  SHLGL  4973
             SHLGL
Sbjct  742   SHLGL  746


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  169  KSLAVAPE  192
            KSL V PE
Sbjct  927  KSLKVVPE  934


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7734  RMNK  7745
             RMNK
Sbjct  937   RMNK  940


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5759  KTVAMR  5776
             KTVA R
Sbjct  940   KTVAVR  945


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  1396  ED-PAIRQE  1419
             ED P I QE
Sbjct  1120  EDAPVIHQE  1128


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  237   EPTEKFYY  244


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  282   ISLPES  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  353   YQIHFTKTPKY  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  369   PFDLMVFVTNP  379


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  456   LHLSVLRTELRP  467


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2634  SINTWMI  2654
             SI TW I
Sbjct  798   SITTWEI  804


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6572  EEVVIRSV  6595
             E+V IR V
Sbjct  843   EQVEIRAV  850


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6071  VEQMHED  6091
             V QM ED
Sbjct  987   VAQMTED  993


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  70    SSEKTVLTP  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  88    FTIP  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  139   YTPGSTVLY  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  425   RTKKQEL  431


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6086  EDII  6097
             EDII
Sbjct  753   EDII  756


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  767   FPESW  771


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 2/16 (12%)
 Frame = +2

Query  2384  PAGLKKKKSVTV--LD  2425
             P G    K V V  LD
Sbjct  933   PEGIRMNKTVAVRTLD  948


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5425  DFLDA  5411
             DFL+A
Sbjct  1174  DFLEA  1178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2100  LALLRL  2117
             LALL L
Sbjct  1238  LALLQL  1243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9165  ALLRLK  9148
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  80    ALLRLK  63
             ALL LK
Sbjct  1239  ALLQLK  1244


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6041  LSHLP  6027
             L HLP
Sbjct  14    LTHLP  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  202  GQWKIRAY  209


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  489   YYTYLI  494


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  602   VFVLNKK--------------NKLTQSKIWDV  619


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4749  LLNLFL  4732
             L+N FL
Sbjct  790   LMNIFL  795


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8693  CVVDP  8679
             CV DP
Sbjct  816   CVADP  820


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  728  LPYS  739
            LPYS
Sbjct  835  LPYS  838


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7209  EVNYIN  7226
             E NY N
Sbjct  1177  EANYMN  1182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  34    LRLESEETMVL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  74    TVLTPA  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  288   LKRIP  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  342   ERSGIP  347


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  347   PIVT  350


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  370   FDLMV  374


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  492   YLIM  495


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  517   LPLSI  521


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  528   SFRL  531


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  1504  LSVSIVAKKG  1533
             L VS   KKG
Sbjct  805   LAVSMSDKKG  814


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3743  KLVSAGIR  3766
             K V  GIR
Sbjct  930   KVVPEGIR  937


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1516  LKHL  1505
             LKHL
Sbjct  1000  LKHL  1003


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6822  SL--NLLAI  6802
             SL  NL AI
Sbjct  1087  SLAVNLIAI  1095


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  233   EVI-VEPTEKF  242


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  280   QRISLPE  286


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  280   QRISL  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  222  RSSLD  236
            RS LD
Sbjct  748  RSNLD  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  372   LD---RWEK  389
             LD    WEK
Sbjct  1028  LDETEQWEK  1036


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1924  PSSWQT  1907
             PS W T
Sbjct  1074  PSTWLT  1079


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5045  NNTKKDKA  5068
             NN  KD A
Sbjct  1135  NNNEKDMA  1142


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6720  NALPG  6706
             N LPG
Sbjct  1163  NSLPG  1167


>emb|CAA66157.1|  immunoglobulin light chain [Homo sapiens]
Length=110


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   477
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   477
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             +PLTFG
Sbjct  94    FPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1946  FPLSF  1932
             FPL F
Sbjct  94    FPLTF  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>emb|CAB51308.1|  immunoglobulin kappa chain variable region [Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   477
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   477
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>gb|AAY33396.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=108


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   478
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   478
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  756  QMVHQAISPRTLNAWV  803
            QM +   SP TL A V
Sbjct  3    QMTQ---SPSTLSASV  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>gb|AAY33428.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 7/17 (41%)
 Frame = -1

Query  5287  YYGFHSCP---SIPISF  5246
             YY    C    S PI F
Sbjct  86    YY----CQQADSFPITF  98


>gb|AAY33484.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             +PLTFG
Sbjct  94    FPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1946  FPLSF  1932
             FPL F
Sbjct  94    FPLTF  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>gb|AAY33426.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


>gb|AAY33480.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YP TFG
Sbjct  94    YPITFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


>gb|AAY33462.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>gb|AAY33465.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 5/16 (31%)
 Frame = -2

Query  6885  TISGSPPED-----CL  6853
             TIS   PED     CL
Sbjct  74    TISSLQPEDFATYYCL  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YP TFG
Sbjct  94    YPWTFG  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  777  SPRTLNAWV  803
            SP TL A V
Sbjct  7    SPSTLSASV  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  964  AASSLM  947
            AASSL+
Sbjct  50   AASSLL  55


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6178  ILQISAL  6158
             IL IS L
Sbjct  72    ILTISSL  78


>gb|AAY33361.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             +PLTFG
Sbjct  94    FPLTFG  99


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1946  FPLSF  1932
             FPL F
Sbjct  94    FPLTF  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>gb|AAY33391.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  756  QMVHQAISPRTLNAWV  803
            QM +   SP TL A V
Sbjct  3    QMTQ---SPSTLSASV  15


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 7/17 (41%)
 Frame = -1

Query  5287  YYGFHSCP---SIPISF  5246
             YY    C    S PI F
Sbjct  86    YY----CQQANSFPITF  98


>gb|AAY33364.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   479
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  26    SQGISSW  32


 Score = 19.7 bits (39),  Expect(2) =   479
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  32    WLAWY  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  74    TISSLQPED  82


>emb|CAJ90640.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=105


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   481
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  24    SQGISSW  30


 Score = 19.7 bits (39),  Expect(2) =   481
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  30    WLAWY  34


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             E TQSPS
Sbjct  1     ELTQSPS  7


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  72    TISSLQPED  80


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6393  TFGQ  6382
             TFGQ
Sbjct  95    TFGQ  98


>emb|CAR62808.1|  immunoglobulin kappa chain variable region [Homo sapiens]
Length=80


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   506
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  8     SQGISSW  14


 Score = 19.7 bits (39),  Expect(2) =   506
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  14    WLAWY  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  216  FPFAF  202
            FPF F
Sbjct  76   FPFTF  80


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  56    TISSLQPED  64


>pdb|3HUJ|A  Chain A, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide 
In Complex With Semi-Invariant Nkt Cell Receptor
 pdb|3HUJ|C  Chain C, Crystal Structure Of Human Cd1d-Alpha-Galactosylceramide 
In Complex With Semi-Invariant Nkt Cell Receptor
Length=284


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.0 bits (42),  Expect(2) =   511
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  2795  LHPDKW---TVQ  2821
             L  DKW   TVQ
Sbjct  149   LNQDKWTRETVQ  160


 Score = 18.9 bits (37),  Expect(2) =   511
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +1

Query  2872  VSGEIELGKSDL  2907
             VSG  E GKS+L
Sbjct  171   VSGLLESGKSEL  182


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  2911  WVNLTCPIQ  2885
             WVNL   IQ
Sbjct  141   WVNLA--IQ  147


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5362  RGEQE  5376
             RGEQE
Sbjct  223   RGEQE  227


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7608  LAFQGT  7591
             L FQGT
Sbjct  125   LSFQGT  130


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +2

Query  4208  PQ--SQGVVESMNKELKKIIGQV  4270
             PQ  S G  ES   ELKK   QV
Sbjct  168   PQFVS-GLLESGKSELKK---QV  186


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5479  GNESNTFY  5456
             GN SN F+
Sbjct  108   GNASNNFF  115


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3756  LESGK  3770
             LESGK
Sbjct  175   LESGK  179


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7016  LPCRIKQ  7036
             L CR+K+
Sbjct  260   LSCRVKH  266


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1978  SDTHRNL--W  2001
             SDT R L  W
Sbjct  45    SDTVRSLKPW  54


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  41   WLTREP  58
            WL R P
Sbjct  191  WLSRGP  196


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  9126  WLTREP  9143
             WL R P
Sbjct  191   WLSRGP  196


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2624  DIVIY  2638
             DIV Y
Sbjct  273   DIVLY  277


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9015  HASLE  9001
             H SLE
Sbjct  266   HSSLE  270


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  651  PLSCL  637
            PL CL
Sbjct  10   PLRCL  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5436  SFRLTSW  5416
             SF  TSW
Sbjct  126   SFQGTSW  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7061  LLSATC  7044
             LL  TC
Sbjct  162   LLNGTC  167


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             EL KQ+
Sbjct  181   ELKKQV  186


>pdb|1ZT4|A  Chain A, The Crystal Structure Of Human Cd1d With And Without 
Alpha- Galactosylceramide
 pdb|1ZT4|C  Chain C, The Crystal Structure Of Human Cd1d With And Without 
Alpha- Galactosylceramide
Length=281


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.0 bits (42),  Expect(2) =   512
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  2795  LHPDKW---TVQ  2821
             L  DKW   TVQ
Sbjct  148   LNQDKWTRETVQ  159


 Score = 18.9 bits (37),  Expect(2) =   512
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +1

Query  2872  VSGEIELGKSDL  2907
             VSG  E GKS+L
Sbjct  170   VSGLLESGKSEL  181


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  2911  WVNLTCPIQ  2885
             WVNL   IQ
Sbjct  140   WVNLA--IQ  146


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5362  RGEQE  5376
             RGEQE
Sbjct  222   RGEQE  226


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7608  LAFQGT  7591
             L FQGT
Sbjct  124   LSFQGT  129


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +2

Query  4208  PQ--SQGVVESMNKELKKIIGQV  4270
             PQ  S G  ES   ELKK   QV
Sbjct  167   PQFVS-GLLESGKSELKK---QV  185


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5479  GNESNTFY  5456
             GN SN F+
Sbjct  107   GNASNNFF  114


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3756  LESGK  3770
             LESGK
Sbjct  174   LESGK  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7016  LPCRIKQ  7036
             L CR+K+
Sbjct  259   LSCRVKH  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  878  WGGSF  864
            WGGS+
Sbjct  277  WGGSY  281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1978  SDTHRNL--W  2001
             SDT R L  W
Sbjct  44    SDTVRSLKPW  53


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  41   WLTREP  58
            WL R P
Sbjct  190  WLSRGP  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  9126  WLTREP  9143
             WL R P
Sbjct  190   WLSRGP  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2624  DIVIY  2638
             DIV Y
Sbjct  272   DIVLY  276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9015  HASLE  9001
             H SLE
Sbjct  265   HSSLE  269


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  651  PLSCL  637
            PL CL
Sbjct  9    PLRCL  13


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5436  SFRLTSW  5416
             SF  TSW
Sbjct  125   SFQGTSW  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7061  LLSATC  7044
             LL  TC
Sbjct  161   LLNGTC  166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             EL KQ+
Sbjct  180   ELKKQV  185


>pdb|2PO6|A  Chain A, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With 
Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain
 pdb|2PO6|E  Chain E, Crystal Structure Of Cd1d-Lipid-Antigen Complexed With 
Beta- 2-Microglobulin, Nkt15 Alpha-Chain And Nkt15 Beta-Chain
Length=278


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.0 bits (42),  Expect(2) =   514
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  2795  LHPDKW---TVQ  2821
             L  DKW   TVQ
Sbjct  143   LNQDKWTRETVQ  154


 Score = 18.9 bits (37),  Expect(2) =   514
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +1

Query  2872  VSGEIELGKSDL  2907
             VSG  E GKS+L
Sbjct  165   VSGLLESGKSEL  176


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  2911  WVNLTCPIQ  2885
             WVNL   IQ
Sbjct  135   WVNLA--IQ  141


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5362  RGEQE  5376
             RGEQE
Sbjct  217   RGEQE  221


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7608  LAFQGT  7591
             L FQGT
Sbjct  119   LSFQGT  124


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +2

Query  4208  PQ--SQGVVESMNKELKKIIGQV  4270
             PQ  S G  ES   ELKK   QV
Sbjct  162   PQFVS-GLLESGKSELKK---QV  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5479  GNESNTFY  5456
             GN SN F+
Sbjct  102   GNASNNFF  109


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3756  LESGK  3770
             LESGK
Sbjct  169   LESGK  173


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7016  LPCRIKQ  7036
             L CR+K+
Sbjct  254   LSCRVKH  260


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1978  SDTHRNL--W  2001
             SDT R L  W
Sbjct  39    SDTVRSLKPW  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  41   WLTREP  58
            WL R P
Sbjct  185  WLSRGP  190


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  9126  WLTREP  9143
             WL R P
Sbjct  185   WLSRGP  190


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2624  DIVIY  2638
             DIV Y
Sbjct  267   DIVLY  271


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  9015  HASLE  9001
             H SLE
Sbjct  260   HSSLE  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  651  PLSCL  637
            PL CL
Sbjct  4    PLRCL  8


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  5436  SFRLTSW  5416
             SF  TSW
Sbjct  120   SFQGTSW  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7061  LLSATC  7044
             LL  TC
Sbjct  156   LLNGTC  161


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             EL KQ+
Sbjct  175   ELKKQV  180


>emb|CAR62890.1|  immunoglobulin kappa chain variable region [Homo sapiens]
Length=73


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   516
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQG+ SW
Sbjct  5     SQGISSW  11


 Score = 19.7 bits (39),  Expect(2) =   516
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL WY
Sbjct  11    WLAWY  15


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TIS   PED
Sbjct  53    TISSLQPED  61


>pdb|2KMS|A  Chain A, Combined High- And Low-Resolution Techniques Reveal 
Compact Structure In Central Portion Of Factor H Despite Long 
Inter-Modular Linkers
Length=115


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = -3

Query  4856  PPFY-GDSLTQMPVSFSC  4806
             PP+Y GDS     V F C
Sbjct  18    PPYYYGDS-----VEFNC  30


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -1

Query  3250  LS--PYYY  3233
             LS  PYYY
Sbjct  15    LSSPPYYY  22


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6641  SVEINC  6658
             SVE NC
Sbjct  25    SVEFNC  30


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3081  YRSRGK  3098
             YR RGK
Sbjct  90    YRCRGK  95


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7661  WDREIN  7678
             WD E+N
Sbjct  108   WDPEVN  113


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  442  HTICFN  425
            HT+C N
Sbjct  100  HTVCIN  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5917  HHSILCI  5937
             H SI CI
Sbjct  39    HRSITCI  45


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +2

Query  4247  LKK------IIGQVRDQAEHLK  4294
             LKK      II       EHLK
Sbjct  61    LKKCKSSNLII-----LEEHLK  77


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  595  VCIKG  609
            VCI G
Sbjct  102  VCING  106


>gb|ACN63335.1|  B cell antibody heavy chain variable region [Homo sapiens]
Length=124


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  6282  KNMHFFINL  6308
             KN HFF NL
Sbjct  78    KN-HFFLNL  85


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -1

Query  313  SQNFWRT--HQSP  281
            S NFW T   Q P
Sbjct  32   SSNFWWTWVRQPP  44


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7625  EIYYS  7611
             E YYS
Sbjct  53    EMYYS  57


>pdb|3GAU|A  Chain A, Solution Structure Of Human Complement Factor H In 50 
Mm Nacl Buffer
 pdb|3GAV|A  Chain A, Solution Structure Of Human Complement Factor H In 137 
Mm Nacl Buffer
 pdb|3GAW|A  Chain A, Solution Structure Of Human Complement Factor H In 250 
Mm Nacl Buffer
Length=1213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = -3

Query  4856  PPFY-GDSLTQMPVSFSC  4806
             PP+Y GDS     V F C
Sbjct  689   PPYYYGDS-----VEFNC  701


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -1

Query  3250  LS--PYYY  3233
             LS  PYYY
Sbjct  686   LSSPPYYY  693


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9036  WRALRSC  9056
             WR L SC
Sbjct  238   WRPLPSC  244


 Score = 17.6 bits (34),  Expect(2) =  5973
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  4148  TVRAACW  4168
             T R  CW
Sbjct  1195  TLRTTCW  1201


 Score = 16.8 bits (32),  Expect(2) =  5973
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4191  LEFPT  4205
             LE+PT
Sbjct  1205  LEYPT  1209


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6644  VEINCTRPN  6670
             VEI C  P+
Sbjct  188   VEISCKSPD  196


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1112  SYWD  1101
             SYWD
Sbjct  349   SYWD  352


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6004  VCGYTG  5987
             VCGY G
Sbjct  534   VCGYNG  539


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4125  LSVCIV  4108
             L VCIV
Sbjct  663   LPVCIV  668


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6641  SVEINC  6658
             SVE NC
Sbjct  696   SVEFNC  701


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/44 (27%), Positives = 13/44 (29%), Gaps = 26/44 (59%)
 Frame = +3

Query  8292  ATYLEE*DRAWKGFCYKMGG---------KWSKSSVIGWPTVRE  8396
             ATY            YKM G          W      G PT R+
Sbjct  1001  ATY------------YKMDGASNVTCINSRWT-----GRPTCRD  1027


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  8352  CHPSYSKILSK  8320
             CHP Y   L K
Sbjct  398   CHPGYA--LPK  406


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3081  YRSRGK  3098
             YR RGK
Sbjct  761   YRCRGK  766


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3550  FAGFGI  3567
             F GFGI
Sbjct  942   FEGFGI  947


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  1101  IPVGE---IYK  1124
             IP GE   +YK
Sbjct  981   IPMGEKKDVYK  991


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  3410  TFY-VDGAAN  3436
             T+Y  DGA N
Sbjct  1002  TYYKMDGASN  1011


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1088  CHPSY  1074
             CHP Y
Sbjct  398   CHPGY  402


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  9030  GEWRALRSCI  9059
             GEW  L  CI
Sbjct  658   GEWTTLPVCI  667


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7661  WDREIN  7678
             WD E+N
Sbjct  779   WDPEVN  784


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7206  GEVNY  7220
             GE+NY
Sbjct  104   GEINY  108


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6718  ICYNR  6732
             ICY R
Sbjct  545   ICYER  549


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  442  HTICFN  425
            HT+C N
Sbjct  771  HTVCIN  776


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7192  ISSSRS  7175
             I SSRS
Sbjct  863   INSSRS  868


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6314  IPIDNDTTSY  6343
             I  +N+TT Y
Sbjct  889   ISEENETTCY  898


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  2891  WASQIYP  2911
             W  Q YP
Sbjct  19    WSDQTYP  25


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1480  LPLCII  1463
             LP CI+
Sbjct  663   LPVCIV  668


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8211  CSMPQ  8225
             CSM Q
Sbjct  785   CSMAQ  789


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  986  WMHSIPFC  963
            W +SIP C
Sbjct  840  W-QSIPLC  846


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3720  IPLC  3709
             IPLC
Sbjct  843   IPLC  846


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8988  KVPCS  8974
             K+PCS
Sbjct  849   KIPCS  853


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  5401  EPWKHPGSQP---KTAC  5442
             E W HP   P   KT C
Sbjct  958   EKWSHP---PSCIKTDC  971


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  55   THCLSL  72
            T CLSL
Sbjct  969  TDCLSL  974


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9140  THCLSL  9157
             T CLSL
Sbjct  969   TDCLSL  974


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1624  CLSVQSF  1604
             CLS  SF
Sbjct  971   CLSLPSF  977


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4812  ERDWHLGQGV  4841
             +R+ H GQ V
Sbjct  147   DREYHFGQAV  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4317  NTAICT  4300
             NTA CT
Sbjct  287   NTAKCT  292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7813  IPQPICYVKP  7784
             IP P C  KP
Sbjct  297   IPAPRCTLKP  306


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1782  VPCL  1771
             VPCL
Sbjct  365   VPCL  368


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5917  HHSILCI  5937
             H SI CI
Sbjct  710   HRSITCI  716


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +2

Query  4247  LKK------IIGQVRDQAEHLK  4294
             LKK      II       EHLK
Sbjct  732   LKKCKSSNLII-----LEEHLK  748


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5812  PPSPQV  5795
             PP PQ+
Sbjct  794   PPPPQI  799


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6140  PLCV  6151
             PLCV
Sbjct  844   PLCV  847


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4246  IKENY  4260
             I ENY
Sbjct  1155  IMENY  1159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7904  YSPL  7915
             YSPL
Sbjct  259   YSPL  262


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4587  MENRW  4601
             MEN W
Sbjct  414   MENGW  418


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1518  CGKEG  1532
             CGK+G
Sbjct  476   CGKDG  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1581  CGKEG  1595
             CGK+G
Sbjct  476   CGKDG  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 11/32 (34%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  6422  CAPAGFAILKCNNKTFNGTGPCTNVSTVQCTH  6517
             C P GF I           GP      VQC H
Sbjct  579   CKP-GFTIV----------GP----NSVQCYH  595


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1226  YIVS  1215
             YIVS
Sbjct  1040  YIVS  1043


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2543  EAHCTD  2526
             E HC D
Sbjct  171   EMHCSD  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3833  SNYCD  3819
             S YCD
Sbjct  336   SYYCD  340


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3327  IQVACQ  3310
             I VAC+
Sbjct  394   IDVACH  399


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  595  VCIKG  609
            VCI G
Sbjct  773  VCING  777


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3946  SRNMATRL  3969
             S NM T L
Sbjct  802   SHNMTTTL  809


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8523  QEEEEV  8540
             QE EE+
Sbjct  828   QEGEEI  833


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4214  SQGVVESM  4237
             S+GVV  M
Sbjct  920   SHGVVAHM  927


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2860  IDSPAV  2843
             ID PA+
Sbjct  947   IDGPAI  952


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  443   PYYMF  429
             PY MF
Sbjct  1062  PYEMF  1066


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5243  YETYGD  5260
             YE +GD
Sbjct  1063  YEMFGD  1068


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4532  DNSDI  4546
             DN DI
Sbjct  1098  DNGDI  1102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +1

Query  8335  AIRWVASGQK  8364
             A RW A  QK
Sbjct  1162  ALRWTAK-QK  1170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8759  KGQWI  8745
             KG+W+
Sbjct  50    KGEWV  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8394  ERMRR  8408
             E MRR
Sbjct  320   ENMRR  324


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3735  CSFPPIPLC  3709
             CS   I LC
Sbjct  785   CSMAQIQLC  793


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  130  PESHN  116
            P SHN
Sbjct  800  PNSHN  804


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6485  CTNVSTVQ  6508
             C N  TVQ
Sbjct  1030  CVNPPTVQ  1037


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1198  PCLMSR  1181
             PC  SR
Sbjct  1148  PCVISR  1153


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3064  RLNSR  3078
             RL SR
Sbjct  1188  RLSSR  1192


>gb|ACQ41818.1|  TLR9 [Homo sapiens]
 gb|ACQ41825.1|  TLR9 [Homo sapiens]
 gb|ACQ41826.1|  TLR9 [Homo sapiens]
 11 more sequence titles
 gb|ACQ41827.1|  TLR9 [Homo sapiens]
 gb|ACQ41828.1|  TLR9 [Homo sapiens]
 gb|ACQ41829.1|  TLR9 [Homo sapiens]
 gb|ACQ41830.1|  TLR9 [Homo sapiens]
 gb|ACQ41831.1|  TLR9 [Homo sapiens]
 gb|ACQ41819.2|  TLR9 [Homo sapiens]
 gb|ACQ41820.2|  TLR9 [Homo sapiens]
 gb|ACQ41821.2|  TLR9 [Homo sapiens]
 gb|ACQ41822.2|  TLR9 [Homo sapiens]
 gb|ACQ41823.2|  TLR9 [Homo sapiens]
 gb|ACQ41824.2|  TLR9 [Homo sapiens]
Length=1031


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
 Frame = -3

Query  1649  PDLP*K--ISLSLS  1614
             P LP K  ISLSLS
Sbjct  138   PALP-KSLISLSLS  150


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = -3

Query  3215  FALPLLIV--------LHH  3183
             FAL LL V        LHH
Sbjct  818   FALSLLAVALGLGVPMLHH  836


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  906  LCLAW  892
            LCLAW
Sbjct  848  LCLAW  852


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1045  AMSLPLGSL  1019
             AM L LG L
Sbjct  20    AMTLALGTL  28


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5864  EKLWVTVY  5887
             E LW  VY
Sbjct  920   ENLWASVY  927


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = +2

Query  7433  LLRA--IEAQQHLLQ  7471
             LLRA    AQQ LL+
Sbjct  945   LLRASFLLAQQRLLE  959


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  221  LVSLSLS  201
            L+SLSLS
Sbjct  144  LISLSLS  150


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  8189  LKNSAVSLLNA  8221
             LK+S  S LNA
Sbjct  290   LKDSSLSWLNA  300


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1669  QGIFFR  1686
             +GIFFR
Sbjct  371   HGIFFR  376


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  1628  SLSLST--IFHL  1599
             SLSLS   I HL
Sbjct  66    SLSLSSNRIHHL  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -3

Query  2363  LPRSLEF---SY  2337
             LP SLE+   SY
Sbjct  217   LPSSLEYLLLSY  228


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 10/32 (31%)
 Frame = -2

Query  7581  QMSFPEQPQ--IPRSC*SF---RY--LSTARI  7507
             QM F  Q Q  I R    F   RY  LS  RI
Sbjct  398   QMNFINQAQLGIFR---AFPGLRYVDLSDNRI  426


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 10/22 (45%)
 Frame = -3

Query  2393  TLRDVVFLIELPRSLEFSY*VL  2328
             TLR+      LP SL+    VL
Sbjct  646   TLRN------LPKSLQ----VL  657


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  269  LPCALQ  252
            LPC LQ
Sbjct  32   LPCELQ  37


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  1794  TSLRSL-F-GN  1820
             TSLR L F GN
Sbjct  597   TSLRALDFSGN  607


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 7/21 (33%)
 Frame = -1

Query  2383  MW-----YS*LNFPEVLSSLI  2336
             MW     Y  L F + LS LI
Sbjct  612   MWAEGDLY--LHFFQGLSGLI  630


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  663  CFALPL  646
            CFAL L
Sbjct  817  CFALSL  822


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6017  LVGWGLW  5997
             L GW LW
Sbjct  837   LCGWDLW  843


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4812  ERDW  4823
             ERDW
Sbjct  909   ERDW  912


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1505  NNLSLVP  1485
             NNL  VP
Sbjct  208   NNLTVVP  214


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -2

Query  5823  PHLHP----HL  5803
             P+LHP    HL
Sbjct  272   PQLHPDTFSHL  282


 Score = 17.6 bits (34),  Expect(2) = 13276
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -2

Query  2310  LHLVLSFFFM  2281
             LH  L F FM
Sbjct  165   LH-ALRFLFM  173


 Score = 15.1 bits (28),  Expect(2) = 13276
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2363  LPRSL  2349
             LP SL
Sbjct  140   LPKSL  144


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1252  ALRVL  1238
             ALRVL
Sbjct  244   ALRVL  248


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7678  QLHKLN  7695
             QL KLN
Sbjct  334   QLRKLN  339


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  759  FAPGCSAL*GNF  724
            F P CS L  NF
Sbjct  465  FRPNCSTL--NF  474


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  4878  VDPELADQLIHL  4913
             V PE+  QL HL
Sbjct  486   VQPEMFAQLSHL  497


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2567  LVILS  2553
             LVILS
Sbjct  967   LVILS  971


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  384  EKIRLRPG  407
            EK+ L PG
Sbjct  443  EKVWLQPG  450


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -3

Query  7553  SPGAVDPLGIFPQ  7515
             SPG    L IF Q
Sbjct  791   SPGQLQGLSIFAQ  803


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -3

Query  5135  VALGLLGLVP  5106
             VALG LG VP
Sbjct  825   VALG-LG-VP  832


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 7/14 (50%)
 Frame = +3

Query  1359  TLEEM-------MT  1379
             TLEE+       MT
Sbjct  123   TLEELNLSYNNIMT  136


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2792  ELHPD  2806
             +LHPD
Sbjct  273   QLHPD  277


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8491  LPML  8502
             LPML
Sbjct  389   LPML  392


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8667  YLVFF  8653
             YL FF
Sbjct  663   YLAFF  667


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  584  NPLLCA  601
            NPL CA
Sbjct  759  NPLHCA  764


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4689  LSLKHT  4672
             LSL HT
Sbjct  147   LSLSHT  152


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  6041  LSHLPILLL  6015
             LSH  IL+L
Sbjct  149   LSHTNILML  157


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5446  NCYCKKCC  5469
             NCY K  C
Sbjct  176   NCYYKNPC  183


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  5147  VAPSVALGLLGL  5112
             VAP     LLGL
Sbjct  189   VAPGA---LLGL  197


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2896  CPIQFPH  2876
             CP +FP+
Sbjct  267   CPRHFPQ  273


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3462  PAFPNLVSL  3436
             P F  LV L
Sbjct  357   PSFGSLVAL  365


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7290  CTTLLFAL  7267
             C TL F L
Sbjct  469   CSTLNFTL  476


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2357  RSLEFS  2340
             R L+FS
Sbjct  600   RALDFS  605


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  839  HFWAE  825
            H WAE
Sbjct  611  HMWAE  615


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 6/21 (28%)
 Frame = +2

Query  8033  LIWDDLRSLCLFSYHRLRDLL  8095
             LIW DL      S  RL  LL
Sbjct  629   LIWLDL------SQNRLHTLL  643


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  5098  SVSFVTLGKGGFIFF  5054
             S+SFV  G     FF
Sbjct  711   SISFVAPG-----FF  720


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2811  HLSGW  2797
             HL GW
Sbjct  836   HLCGW  840


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5461  FYNSN  5447
             FYN N
Sbjct  1019  FYNRN  1023


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +3

Query  6324  IMILPAIS*QVVTPQSL  6374
             IM  PA       P SL
Sbjct  134   IMTVPAL------PKSL  144


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7426  LLLHYTR  7406
             LLL Y R
Sbjct  224   LLLSYNR  230


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 3/6 (50%), Gaps = 0/6 (0%)
 Frame = +2

Query  6953  WFNSTW  6970
             W N  W
Sbjct  297   WLNASW  302


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  618  LSLSFD  601
            L LSF+
Sbjct  338  LNLSFN  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  1499  LSLVPKIASL  1470
             LSL P   SL
Sbjct  353   LSLAPSFGSL  362


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5333  TPNSEN  5316
             TP SE+
Sbjct  459   TPSSED  464


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7491  LMPQT  7477
             L+PQT
Sbjct  642   LLPQT  646


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8954  LEVLRM  8937
             L+VLR+
Sbjct  654   LQVLRL  659


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8012  LVNGSL  8029
             L NGSL
Sbjct  691   LTNGSL  696


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  6828  NC-SLNLLAI  6802
             +C  L LLA+
Sbjct  816   DCFALSLLAV  825


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8380  HPITLL  8363
             HP  LL
Sbjct  8     HPLSLL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8362  FDHLP  8348
             F HLP
Sbjct  82    FAHLP  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 12/32 (37%)
 Frame = -3

Query  341  THLSPSSLR*SKFLAYS--PVAAPRLLPCALQ  252
            THLS         L Y    V  PR LP  L+
Sbjct  201  THLS---------LKYNNLTVV-PRNLPSSLE  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3934  LSMHGFSF  3911
             L MHG  F
Sbjct  368   LDMHGIFF  375


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5310  LSIFR  5324
             L IFR
Sbjct  407   LGIFR  411


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8733  PGVRY  8747
             PG RY
Sbjct  414   PGLRY  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 11/29 (37%)
 Frame = +3

Query  8592  AVDLSHFLKEKGGLEGLIHSQRRQDILDL  8678
             AV+ S+FL     L GL   Q    +LDL
Sbjct  510   AVNGSQFL----PLTGL---Q----VLDL  527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3714  KELEEMN  3734
             KEL E+N
Sbjct  724   KELRELN  730


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8556  PQVPLRPM  8579
             P V L PM
Sbjct  98    PPVGLSPM  105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  3084  CISAIKSFDG  3055
             CI   K F G
Sbjct  322   CITKTKAFQG  331


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7016  LPCRIK  7033
             LP R+K
Sbjct  783   LPSRVK  788


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8798  LIWLNW  8781
             L WL W
Sbjct  850   LAWLPW  855


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4170  GRESSRN  4190
             GR+S R+
Sbjct  857   GRQSGRD  863


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  463  RSSSLLAH  440
            R S LLA+
Sbjct  947  RASFLLAQ  954


>ref|NP_002255.3|  importin subunit alpha-1 [Homo sapiens]
Length=538

 GENE ID: 3836 KPNA1 | karyopherin alpha 1 (importin alpha 5) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  891  CLNLVGWLL  865
            CLN   WLL
Sbjct  255  CLNVLSWLL  263


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 15/27 (55%)
 Frame = -2

Query  2595  IFVMLL------------W---NIAGD  2560
             IF+ LL            W   NIAGD
Sbjct  173   IFIELLSSEFEDVQEQAVWALGNIAGD  199


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6896  NCALQF  6879
             NC LQF
Sbjct  140   NCTLQF  145


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = -1

Query  2749  VW-----C-GKSPP  2726
             VW     C GKSPP
Sbjct  233   VWALSNLCRGKSPP  246


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = -1

Query  2758  MFFVWCGKSPPQQMLS  2711
             M F    KSP QQ LS
Sbjct  90    MIF---SKSPEQQ-LS  101


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  268  KRRGAATGE  294
            KRR  AT E
Sbjct  46   KRRNVATAE  54


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1567  RAVGNV  1584
             RAVGN+
Sbjct  318   RAVGNI  323


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 14/31 (45%)
 Frame = +2

Query  2180  EKIKALVEI-C--------TEMEKEGKISKI  2245
             E IK LVE  C        T M+     SKI
Sbjct  414   EQIKYLVELGCIKPLCDLLTVMD-----SKI  439


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1202  WSLSY  1188
             W LSY
Sbjct  276   WALSY  280


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8108  RIVELL  8125
             R VELL
Sbjct  300   RLVELL  305


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5339  MSTPNSEN  5316
             M TP  EN
Sbjct  1     MTTPGKEN  8


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = -1

Query  4783  ITNLA-SPSGMCTSELI  4736
             I N+   P G  TS++I
Sbjct  72    ISNMEMAPGGVITSDMI  88


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  8099  IVTRIVELLGR  8131
             +V R VE L R
Sbjct  127   VVARFVEFLKR  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  525  AVPVFV  508
            AVP+F+
Sbjct  170  AVPIFI  175


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +2

Query  2594  ILEP----FRKQN  2620
             IL P    F KQN
Sbjct  212   ILPPLLQLFSKQN  224


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3456  FPNLVSLL  3433
             FP L+S L
Sbjct  382   FPALISIL  389


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +1

Query  2224  GRENF-----KNWA*KS  2259
             G ENF     KN   KS
Sbjct  5     GKENFRLKSYKN---KS  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8095  LDCN  8106
             LDCN
Sbjct  208   LDCN  211


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5279  AIIRILQ  5299
             A I ILQ
Sbjct  384   ALISILQ  390


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3976  FRRKSY  3993
             FR KSY
Sbjct  9     FRLKSY  14


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5221  EPNP  5210
             EPNP
Sbjct  113   EPNP  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4786  VITNLAS  4766
             V TN AS
Sbjct  150   VLTNIAS  156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8609  LFKR  8620
             LFKR
Sbjct  44    LFKR  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6569  EEEV  6580
             EEEV
Sbjct  58    EEEV  61


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1671  GNFLQSR  1691
             GN LQ R
Sbjct  157   GNSLQTR  163


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8131  ASQKF  8117
             A QKF
Sbjct  102   ATQKF  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1744  VVSTP  1730
             V+STP
Sbjct  121   VISTP  125


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2081  CTLNF  2095
             CTL F
Sbjct  141   CTLQF  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7496  LQARI  7510
             LQ RI
Sbjct  160   LQTRI  164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  1281  NFLPPVKLARLLE  1243
             N LPP     LL+
Sbjct  211   NILPP-----LLQ  218


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1677  FLQS  1688
             FLQS
Sbjct  483   FLQS  486


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  1701  TAPPEESFR  1727
             T P  E FR
Sbjct  2     TTPGKENFR  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4134  ISPVLR  4151
             +SP LR
Sbjct  313   VSPALR  318


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7076  HTLLFLLS  7053
             + LL LLS
Sbjct  341   QSLLHLLS  348


>sp|Q96RL6.2|SIG11_HUMAN  RecName: Full=Sialic acid-binding Ig-like lectin 11; Short=Sialic 
acid-binding lectin 11; Short=Siglec-11; Flags: Precursor
Length=698

 GENE ID: 114132 SIGLEC11 | sialic acid binding Ig-like lectin 11 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4797  PNMLLLP  4777
             P MLLLP
Sbjct  11    PEMLLLP  17


 Score = 21.8 bits (44),  Expect =   981
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 13/25 (52%)
 Frame = -3

Query  224  PL----VSLSLS--------GP-CS  189
            PL    VSLSLS        GP CS
Sbjct  441  PLGSQHVSLSLSVHYPPQLLGPSCS  465


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +3

Query  5292  FCNNCCLSIFR--IGCR  5336
             FC   CL +FR  I CR
Sbjct  575   FCS--CLVVFRVKI-CR  588


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/16 (50%), Positives = 11/16 (68%), Gaps = 3/16 (18%)
 Frame = +1

Query  8950  SRTADIELATRD-FPL  8994
             SR  ++E+ TRD F L
Sbjct  92    SR--EVEMSTRDRFQL  105


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -3

Query  3746  IYLLVH---FLQFLC  3711
             IYL V+   FL  LC
Sbjct  273   IYLEVQKGQFLRLLC  287


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1394  RRTRP  1408
             RRTRP
Sbjct  201   RRTRP  205


 Score = 19.3 bits (38),  Expect(2) =  4866
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +3

Query  7329  LGSWEQQEAL  7358
             LGS  QQ+AL
Sbjct  340   LGS--QQQAL  347


 Score = 15.9 bits (30),  Expect(2) =  4866
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7454  QQHLLQLTV  7480
             QQ+ L L V
Sbjct  343   QQQALDLSV  351


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2623  RHSYLS  2640
             RHS+LS
Sbjct  140   RHSFLS  145


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6311  IIPIDNDTTS  6340
             II I  D TS
Sbjct  255   IISISHDNTS  264


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  3077  LLLSLLMGHNTLHVL  3033
             LLL LL     L VL
Sbjct  14    LLLPLL-----LPVL  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5203  MSNSFILK  5180
             +SN F LK
Sbjct  144   LSNAFFLK  151


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             DRVL S
Sbjct  303   DRVLSS  308


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9074  LPVLG  9088
             LPVLG
Sbjct  20    LPVLG  24


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             YG W KG
Sbjct  70    YGYWFKG  76


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -1

Query  9133  VS-QRAPRLR  9107
             VS QR  RLR
Sbjct  237   VSAQRTVRLR  246


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  48   VS-QRAPRLR  22
            VS QR  RLR
Sbjct  237  VSAQRTVRLR  246


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  2275  ICHKE--KR  2295
             IC KE  KR
Sbjct  586   ICRKEARKR  594


 Score = 17.2 bits (33),  Expect(2) = 15503
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8937  AALGPR  8920
             AAL PR
Sbjct  196   AALSPR  201


 Score = 15.5 bits (29),  Expect(2) = 15503
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8825  VLSF  8814
             VLSF
Sbjct  212   VLSF  215


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5113  SPRRPR  5130
             SPRR R
Sbjct  199   SPRRTR  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             +SLSLS
Sbjct  447   VSLSLS  452


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1919  FLANSF  1902
             FL N F
Sbjct  143   FLSNAF  148


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  4721  FIVMSIKPSP  4692
             F V+S  PSP
Sbjct  210   FSVLSFTPSP  219


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7561  TPNPQE  7544
             TP PQ+
Sbjct  216   TPSPQD  221


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5377  FLALLC  5360
             FL LLC
Sbjct  282   FLRLLC  287


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  9031  GSGEPSDP  9054
             G  +PSDP
Sbjct  411   GPSQPSDP  418


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7906  ISLPNSIHY  7880
             +SL  S+HY
Sbjct  447   VSLSLSVHY  455


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -3

Query  4739  YSWMRAFIVMSIK--PSPSF  4686
             + W  AF     K  P PSF
Sbjct  179   FNW--AF-----KKCPAPSF  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  3948  GLQSTCPCMASP  3913
             GL+  C   ASP
Sbjct  470   GLHCSCSSQASP  481


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8497  MLLVP  8511
             MLL P
Sbjct  13    MLLLP  17


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5756  QKTVAMRV  5779
             Q TV +RV
Sbjct  240   QRTVRLRV  247


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 12/27 (44%)
 Frame = -2

Query  5391  IYWL-----HFLLSSVE*RLFCYVDTQ  5326
             IY L     +FL      RL C  D Q
Sbjct  273   IY-LEVQKGQFL------RLLCAADSQ  292


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7453  RLNSPQQ  7433
             RL S QQ
Sbjct  339   RLGSQQQ  345


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8065  LQLPP  8079
             L+LPP
Sbjct  421   LELPP  425


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3086  SVFLLL  3069
             SVF LL
Sbjct  544   SVFQLL  549


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  3846  VILTCHL  3866
             VI  C L
Sbjct  50    VIVSCNL  56


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  4186  LL---DSRPP  4166
             LL   DS PP
Sbjct  285   LLCAADSQPP  294


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7784  NSTNLPI  7764
             N T LP+
Sbjct  375   NGTSLPV  381


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7496  LQARIL  7513
             LQ R+L
Sbjct  301   LQDRVL  306


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3351  VLTNSH  3334
             VL  SH
Sbjct  305   VLSSSH  310


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5670  CVVHS  5684
             CV HS
Sbjct  391   CVTHS  395


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  474  NPGLLE  491
            +PG LE
Sbjct  417  DPGVLE  422


>emb|CAR62860.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=112


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1215  RDYVDRF  1235
             RDY DRF
Sbjct  101   RDYGDRF  107


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +1

Query  3586  RLTICIRNHSSTT  3624
             RLTI  R+ S  T
Sbjct  67    RLTIS-RDNSKNT  78


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  70    ISRDNSKNTL  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6413  IHYCA  6427
             I YCA
Sbjct  93    IYYCA  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 19/28 (67%)
 Frame = +3

Query  8883  LEWRFDSRLAFHHVA------RELHPEY  8948
             LEW          VA      RE   EY
Sbjct  45    LEW----------VAFISSDGRE---EY  59


>emb|CAR62833.1|  immunoglobulin lambda chain variable region [Homo sapiens]
Length=89


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  40   DVSNRPSGVSNR  51


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  45   PSGVSNR  51


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  1875  VSNRAS-----FS  1852
             VSNR S     FS
Sbjct  41    VSNRPSGVSNRFS  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2829  TIGCT  2815
             TI CT
Sbjct  7     TISCT  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  50    NRFSGSK  56


>emb|CAR62780.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=112


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  1215  RDYVDR---FY  1238
             RDYVD    FY
Sbjct  98    RDYVDWNHNFY  108


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  70    ISRDNSKNTL  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  697  TQDTAI  714
            T+DTA+
Sbjct  88   TEDTAV  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4285  FSLISY  4268
             FS I Y
Sbjct  27    FSFITY  32


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


>emb|CAR62660.1|  immunoglobulin kappa chain variable region [Homo sapiens]
Length=87


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -3

Query  218  VSLSLSGPCS  189
            +SLSLS  CS
Sbjct  59   ISLSLSAACS  68


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1631  ISLSLS  1614
             ISLSLS
Sbjct  59    ISLSLS  64


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  976  LSHSAASSL  950
            LS SAA SL
Sbjct  61   LSLSAACSL  69


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6686  FFLYC  6672
             F LYC
Sbjct  31    FLLYC  35


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5924  LFCASD  5941
             L+CAS+
Sbjct  33    LYCASN  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6763  TMCLSH  6746
             TM LSH
Sbjct  81    TMPLSH  86


>pdb|3DGG|B  Chain B, Crystal Structure Of Fabox108
 pdb|3DGG|D  Chain D, Crystal Structure Of Fabox108
Length=229


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 3/18 (16%)
 Frame = -2

Query  4065  VSCPVSAGITSASIYPLA  4012
             VS   SA  T  S+YPLA
Sbjct  117   VS---SAKTTPPSVYPLA  131


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 11/28 (39%)
 Frame = +2

Query  3083  QKQGQG-QWT-YQI--------YQEPFK  3136
             QK GQG +W  Y I        Y E FK
Sbjct  39    QKPGQGLEWIGY-INPYNDDTNYNEKFK  65


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8315  QGLERI  8332
             QGLE I
Sbjct  43    QGLEWI  48


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = -3

Query  5360  SSNAYSAMSTPNSENG*TAV  5301
             SS AY  +S   SE+   AV
Sbjct  76    SSTAYMELSSLTSED--SAV  93


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8697  GYFPD  8711
             GYFP+
Sbjct  150   GYFPE  154


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -2

Query  8256  TLS----VPSAT  8233
             TLS    VPS T
Sbjct  182   TLSSSVTVPSST  193


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  475  LTANRSSS  452
            LT + SSS
Sbjct  70   LTSDKSSS  77


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S+YPL
Sbjct  126   SVYPL  130


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7482  QTVSCN  7465
             +TV CN
Sbjct  197   ETVTCN  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 2/8 (25%)
 Frame = +1

Query  760  W--YIRPY  777
            W  YI PY
Sbjct  47   WIGYINPY  54


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4015  GYMNCYQDN  3989
             GY N Y D+
Sbjct  49    GYINPYNDD  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3629  QSESELV  3649
             QS  ELV
Sbjct  6     QSGPELV  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2362  FPEVLSS  2342
             FP VL S
Sbjct  172   FPAVLQS  178


>gb|AAL04540.2|AF408742_1  anti-pneumococcal capsular polysaccharide immunoglobulin heavy 
chain variable region [Homo sapiens]
Length=140


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 11/26 (42%)
 Frame = +2

Query  5885  YYGVPVWKEATT-----------TLF  5929
             YYG  VW + TT           TLF
Sbjct  111   YYGMDVWGQGTTVTVSSGSASAPTLF  136


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6628  YYYG  6617
             YYYG
Sbjct  110   YYYG  113


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  64    TISRDNSKN  72


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  65    ISRDNSKNTL  74


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6486  VQMS  6497
             VQMS
Sbjct  76    VQMS  79


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5452  SNWYKQ  5435
             S WY Q
Sbjct  100   SSWYPQ  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1613  TIFHLVS  1593
             T F LVS
Sbjct  134   TLFPLVS  140


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  81    LRAE  84


>pdb|3DGC|R  Chain R, Structure Of Il-22IL-22r1
 pdb|3DGC|S  Chain S, Structure Of Il-22IL-22r1
Length=210


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = +3

Query  4788  TYWGLHTGERDW  4823
             TY     GERDW
Sbjct  43    TY-----GERDW  49


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  6269  GKVQKEYAFF  6298
             GK Q EY FF
Sbjct  165   GK-QREYEFF  173


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  770  LMYHLPLDV  744
            L YHL L V
Sbjct  147  LFYHLELQV  155


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6079  LFYH  6068
             LFYH
Sbjct  147   LFYH  150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5243  YETYGD  5260
             Y TYG+
Sbjct  41    YKTYGE  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1625  LSLSTIFH  1602
             L L  IFH
Sbjct  138   LTLEDIFH  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3368  LWYQLE  3385
             L Y+LE
Sbjct  147   LFYHLE  152


>dbj|BAG37224.1|  unnamed protein product [Homo sapiens]
Length=292

 GENE ID: 474344 GIMAP6 | GTPase, IMAP family member 6 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 14/29 (48%)
 Frame = +1

Query  8728  QGQGS-DIH*P-----LDGATS*YQLSQI  8796
             QGQGS D+  P     L+G      LSQI
Sbjct  255   QGQGSEDV--PGEESWLEG------LSQI  275


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 8/20 (40%)
 Frame = -1

Query  7552  PQELLIL*VSFHSQDSCLEL  7493
             P+EL        SQD  LEL
Sbjct  15    PEEL--------SQDPVLEL  26


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4869  STQVDPELAD  4898
             S QV PE AD
Sbjct  101   SPQVSPEVAD  110


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  441  WASRELE  461
            WA  ELE
Sbjct  86   WAGKELE  92


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2461  RLQEVY  2478
             RLQEV+
Sbjct  145   RLQEVF  150


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9077  PVLGLSG  9097
             PVL LSG
Sbjct  22    PVLELSG  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  9127  QRAP-RLR  9107
             QR P RLR
Sbjct  35    QRTPRRLR  42


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  42  QRAP-RLR  22
           QR P RLR
Sbjct  35  QRTPRRLR  42


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5355  TRQRRAR  5375
             T QRR R
Sbjct  78    TSQRRSR  84


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2429  PHPVLL  2412
             PH VLL
Sbjct  123   PHAVLL  128


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8644  FTPKED  8661
             FT KED
Sbjct  162   FTRKED  167


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2890  LGKSDL  2907
             LGK DL
Sbjct  287   LGKADL  292


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2912  LGKSDL  2895
             LGK DL
Sbjct  287   LGKADL  292


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5216  WLHGLGQ  5236
             WL GL Q
Sbjct  268   WLEGLSQ  274


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1192  DKDQRNP  1212
             +K+QR P
Sbjct  32    EKEQRTP  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  8300  PRRIRQGLERILL  8338
             PRR R  L  IL+
Sbjct  38    PRRLR--L--ILM  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8404  DELSQ  8418
             +ELSQ
Sbjct  16    EELSQ  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/37 (32%), Positives = 13/37 (35%), Gaps = 20/37 (54%)
 Frame = -1

Query  7501  LELLDAPDCELQQMLLRLNSPQ----------Q-IVL  7424
             LE  D P+      L    SPQ          Q IVL
Sbjct  91    LEVIDTPN-----IL----SPQVSPEVADAICQAIVL  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6005  PNPQEVVLV  6031
             P P+ V LV
Sbjct  121   PGPHAVLLV  129


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6138  PHSVL  6152
             PH VL
Sbjct  123   PHAVL  127


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             +LREL
Sbjct  211   QLREL  215


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  5939  LMHKIE---W  5919
             LM K+E   W
Sbjct  215   LMEKVEAIMW  224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  296  TPKIL  310
            TP IL
Sbjct  96   TPNIL  100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7490  KQLQAR  7507
             K+LQ R
Sbjct  246   KELQER  251


>sp|A6NKC4.2|FCGRC_HUMAN  RecName: Full=Putative high affinity immunoglobulin gamma Fc 
receptor IC; Short=IgG Fc receptor IC; AltName: Full=Fc-gamma 
RIC; Short=hFcgammaRIC; Short=FcRIC; Flags: Precursor
Length=280

 GENE ID: 100132417 FCGR1C | Fc fragment of IgG, high affinity Ic, receptor
(CD64) [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND GEY C
Sbjct  78    NDSGEYRC  85


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +2

Query  5873  WVTVYYGVPVWKEATTTLFC  5932
             WV V+       E T TL C
Sbjct  30    WVSVF------QEETVTLHC  43


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4041  ITSASI  4024
             ITSAS+
Sbjct  72    ITSASV  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  770  LMYHLPLDVLHYR  732
            L Y    +VL YR
Sbjct  131  LVY----NVLYYR  139


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  3692  LAWVPAHKGIGGNEQVD  3742
             L WVP       + QVD
Sbjct  8     LLWVPV------DGQVD  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6536  STQLLLNG  6559
             STQ  LNG
Sbjct  53    STQWFLNG  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5442  TSSFRLTS  5419
             T S+R TS
Sbjct  67    TPSYRITS  74


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3916  RSHAW  3930
             R HAW
Sbjct  123   RCHAW  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -1

Query  4672  IWCFTKLFHVL  4640
             +W     FHVL
Sbjct  195   VW-----FHVL  200


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1155  LFYL  1144
             LFYL
Sbjct  200   LFYL  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  3144  KQENMQE*GV  3173
             K+E +QE GV
Sbjct  263   KEEQLQE-GV  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +2

Query  6332  TTSYKLTSCNTSV  6370
             T SY  TS   SV
Sbjct  67    TPSYRITS--ASV  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7004  DTITLPC  7024
             +T+TL C
Sbjct  37    ETVTLHC  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -3

Query  1070  FLKG----TSSSCY-VTS  1032
             FL G    TS   Y +TS
Sbjct  57    FLNGTATQTSTPSYRITS  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3138  FLNG  3127
             FLNG
Sbjct  57    FLNG  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2096  ENLKC  2082
             E LKC
Sbjct  255   EELKC  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2756  HQKEP  2770
             H KEP
Sbjct  272   HRKEP  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  2954  WFL  2946
             WFL
Sbjct  56    WFL  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1056  STLQE  1070
             S LQE
Sbjct  245   SSLQE  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7287  CREKKEQ  7307
             C E KE+
Sbjct  259   CQEQKEE  265


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7339  QEPKEQ  7322
             QE KE+
Sbjct  260   QEQKEE  265


>ref|NP_001120933.1|  NACHT, LRR and PYD domains-containing protein 3 isoform c [Homo 
sapiens]
Length=979

 GENE ID: 114548 NLRP3 | NLR family, pyrin domain containing 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 16/31 (51%)
 Frame = +3

Query  1092  NPPIPVGEIYKRWIILGLNKIVRMYSPTSIL  1184
             NPPI               KIVR   P  IL
Sbjct  284   NPPI--------------HKIVRK--PSRIL  298


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3000  NWQKTER  3020
             +WQK ER
Sbjct  321   DWQKAER  327


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +3

Query  4569  QRSLG--IM  4589
             QRSLG  IM
Sbjct  269   QRSLGDLIM  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5299  TTAVYPF  5319
             TTAVY F
Sbjct  439   TTAVYVF  445


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6143  LCVSLK---CTDLK  6175
             LCV LK   C +LK
Sbjct  818   LCVGLKHLLC-NLK  830


 Score = 18.5 bits (36),  Expect(2) =  3569
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7123  AAINKR  7140
             AAIN R
Sbjct  76    AAINRR  81


 Score = 17.2 bits (33),  Expect(2) =  3569
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7062  EKQCMPLP  7085
             +K C PLP
Sbjct  35    QKGCIPLP  42


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 11/21 (52%)
 Frame = +1

Query  2167  AIDRRKNKSISRNLY----RD  2217
             AI+R       R+LY    RD
Sbjct  77    AINR-------RDLYEKAKRD  90


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  7113  FDEHLICPL  7087
             FDEH I PL
Sbjct  311   FDEH-IGPL  318


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8093  LLIVTRIVEL  8122
             LLI TR V L
Sbjct  346   LLITTRPVAL  355


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4914  YYFDCFSDSA  4943
             Y+F  FSD A
Sbjct  381   YFFKYFSDEA  390


 Score = 16.8 bits (32),  Expect(2) =  9406
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 1/8 (12%)
 Frame = -2

Query  3195  CFTSLV-W  3175
             CF  LV W
Sbjct  409   CFIPLVCW  416


 Score = 16.8 bits (32),  Expect(2) =  9406
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF L SLL
Sbjct  444   VFFLSSLL  451


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1908  VCQED  1922
             +CQED
Sbjct  107   ICQED  111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9139  SLVSQR  9122
             SLV QR
Sbjct  265   SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  54   SLVSQR  37
            SLV QR
Sbjct  265  SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 7/22 (31%), Gaps = 13/22 (59%)
 Frame = -2

Query  5289  LIMASTPAQVSP*VS*ICCPKP  5224
             LIM              CCP P
Sbjct  275   LIMS-------------CCPDP  283


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  7520  ERYLKDQQLLGI  7555
             ER   +Q+LL I
Sbjct  182   ER---EQELLAI  190


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  6066  SFFHMLKFSVTF  6031
             SF HM     TF
Sbjct  519   SFIHM-----TF  525


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  8670  GYLVF-----FG  8650
             GYL+F     FG
Sbjct  571   GYLIFVVRFLFG  582


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = -2

Query  1029  LVLSSG--LVQ*ALHALD  982
             LVLSS   LV+     LD
Sbjct  792   LVLSSNQKLVE-----LD  804


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  9065  SCFLPVLGLS  9094
             SC L  LGLS
Sbjct  940   SCLLQNLGLS  949


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5990  CVPTDPNP  6013
             C P DPNP
Sbjct  279   CCP-DPNP  285


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2350  LSSLI  2336
             LSSLI
Sbjct  332   LSSLI  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6911  EFFYC  6925
             E FYC
Sbjct  629   ELFYC  633


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  952  LMVSFN  935
            LM+ FN
Sbjct  57   LMIDFN  62


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  698  HRTQQ  712
            HR QQ
Sbjct  177  HRSQQ  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1003  IGPACT  986
             IGP CT
Sbjct  315   IGPLCT  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2644  VLIDNY  2627
             VL +NY
Sbjct  560   VLLENY  565


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  6674  CCW  6666
             CCW
Sbjct  900   CCW  902


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2915  SLGKSDL  2895
             SLG  DL
Sbjct  918   SLGNNDL  924


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 11/18 (61%)
 Frame = -1

Query  784  LGD---MA*CTICPWMFC  740
            LGD   M        MFC
Sbjct  924  LGDLGVM--------MFC  933


 Score = 15.5 bits (29),  Expect(2) = 31987
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7587  LLCLGML  7607
             LLC G+L
Sbjct  874   LLCEGLL  880


 Score = 15.1 bits (28),  Expect(2) = 31987
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7690  LNTLL  7704
             L TLL
Sbjct  904   LSTLL  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1730  WGRDN  1744
             WG DN
Sbjct  94    WGSDN  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2096  PISPI  2110
             P+SPI
Sbjct  199   PVSPI  203


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6990  LFDP  6979
             LFDP
Sbjct  208   LFDP  211


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7442  AIEAQQHLL  7468
             A E  QHLL
Sbjct  354   ALEKLQHLL  362


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6415  YGNWLKGYL  6389
             YG   KGYL
Sbjct  565   YGKFEKGYL  573


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6239  CSFNIS  6256
             C F+IS
Sbjct  786   CCFDIS  791


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3847  TSHC  3836
             TSHC
Sbjct  897   TSHC  900


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5834  LGMLMIC  5854
             LG +M C
Sbjct  927   LGVMMFC  933


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1162  CIALP  1176
             CI LP
Sbjct  38    CIPLP  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6125  MALGFDP  6105
             M L FDP
Sbjct  205   MELLFDP  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = -1

Query  2809  FIRM---EF  2792
             FI M   EF
Sbjct  520   FIHMTFQEF  528


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3471  LIEEDK  3488
             L EE+K
Sbjct  535   LLEEEK  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  194  RDLKAKGKPEE  226
            RDL  K K +E
Sbjct  81   RDLYEKAKRDE  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2071  SQQI  2060
             SQQI
Sbjct  601   SQQI  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  766  IRPYHLEL  789
            I P +LEL
Sbjct  623  IQPSQLEL  630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8962  DIELATR  8982
             +I L TR
Sbjct  654   EINLSTR  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6229  LSFLH  6215
             L FLH
Sbjct  681   LGFLH  685


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  994   QGLLH  1008
             +GLLH
Sbjct  877   EGLLH  881


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  882  DLNTML  899
            DL T+L
Sbjct  903  DLSTLL  908


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6993  VLFDPS  6976
             V F+PS
Sbjct  973   VVFEPS  978


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8334  KILSKPCLIL  8305
             KI  KP  IL
Sbjct  289   KIVRKPSRIL  298


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4740  LFLDEGF  4720
             LFL +GF
Sbjct  298   LFLMDGF  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8829  SLLHP  8843
             SLL+P
Sbjct  449   SLLQP  453


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8160  HQYLR  8146
             H YLR
Sbjct  859   HLYLR  863


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  3231  LSVVIFC  3211
             L V  FC
Sbjct  927   LGVMMFC  933


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1159  LTILFNP  1139
             LT+ F P
Sbjct  971   LTVVFEP  977


>pdb|2JG8|A  Chain A, Crystallographic Structure Of Human C1q Globular Heads 
Complexed To Phosphatidyl-Serine
 pdb|2JG8|D  Chain D, Crystallographic Structure Of Human C1q Globular Heads 
Complexed To Phosphatidyl-Serine
 pdb|2JG9|A  Chain A, Crystallographic Structure Of Human C1q Globular Heads 
(P1)
 pdb|2JG9|D  Chain D, Crystallographic Structure Of Human C1q Globular Heads 
(P1)
 pdb|2WNU|A  Chain A, Complex Between C1q Globular Heads And Heparan Sulfate
 pdb|2WNU|D  Chain D, Complex Between C1q Globular Heads And Heparan Sulfate
 pdb|2WNV|A  Chain A, Complex Between C1q Globular Heads And Deoxyribose
 pdb|2WNV|D  Chain D, Complex Between C1q Globular Heads And Deoxyribose
Length=134


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +2

Query  827  QPRSDTHVFSIIRRSHP  877
            QPR     FS IRR  P
Sbjct  1    QPRP---AFSAIRRNPP  14


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3889  GYYFF  3875
             GYY+F
Sbjct  46    GYYYF  50


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  7565  SGKLICTTAVP  7597
             SG  +CT  VP
Sbjct  37    SGRFVCT--VP  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  4699  GFIDITMKALIQ  4734
             GF D T K L Q
Sbjct  77    GFCDTTNKGLFQ  88


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5866  FCSTTD  5849
             FC TT+
Sbjct  78    FCDTTN  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  7204  IVPHISSSR  7178
             IV   SSSR
Sbjct  64    IV---SSSR  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3157  IFSCFQIF  3134
             +FS F IF
Sbjct  124   VFSGFLIF  131


>pdb|2ZG2|A  Chain A, Crystal Structure Of Two N-Terminal Domains Of Native 
Siglec-5
Length=216


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3716  LCVLVP  3699
             LCVLVP
Sbjct  17    LCVLVP  22


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8730  GPGVRYPLTFGW  8765
             GP    PLTF W
Sbjct  155   GP----PLTFSW  162


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5301  NCCLSI  5318
             NC LSI
Sbjct  82    NCSLSI  87


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6626  VQLNTS  6643
             VQLN S
Sbjct  210   VQLNVS  215


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8205  LACSMP  8222
             L CS+P
Sbjct  144   LSCSLP  149


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2905  NLTC  2894
             NLTC
Sbjct  192   NLTC  195


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6828  NCSL  6817
             NCSL
Sbjct  82    NCSL  85


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4764  GDARL  4778
             GDAR+
Sbjct  88    GDARM  92


>pdb|2ZG1|A  Chain A, Crystal Structure Of Two N-Terminal Domains Of Siglec-5 
In Complex With 6'-Sialyllactose
 pdb|2ZG3|A  Chain A, Crystal Structure Of Two N-Terminal Domains Of Native 
Siglec-5 In Complex With 3'-Sialyllactose
Length=214


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3716  LCVLVP  3699
             LCVLVP
Sbjct  16    LCVLVP  21


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8730  GPGVRYPLTFGW  8765
             GP    PLTF W
Sbjct  154   GP----PLTFSW  161


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5301  NCCLSI  5318
             NC LSI
Sbjct  81    NCSLSI  86


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6626  VQLNTS  6643
             VQLN S
Sbjct  209   VQLNVS  214


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8205  LACSMP  8222
             L CS+P
Sbjct  143   LSCSLP  148


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2905  NLTC  2894
             NLTC
Sbjct  191   NLTC  194


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6828  NCSL  6817
             NCSL
Sbjct  81    NCSL  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4764  GDARL  4778
             GDAR+
Sbjct  87    GDARM  91


>pdb|2VLR|E  Chain E, The Structural Dynamics And Energetics Of An Immunodominant 
T-Cell Receptor Are Programmed By Its Vbeta Domain
 pdb|2VLR|J  Chain J, The Structural Dynamics And Energetics Of An Immunodominant 
T-Cell Receptor Are Programmed By Its Vbeta Domain
Length=244


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  48    IYYSQIV--NDFQK  59


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  45    LR-----LIYYSQIV  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  70    REKKE  74


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  165   EVHSG------VSTDPQP  176


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  54    VNDFQK  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  217   LSENDEWT  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  67    SVSRE  71


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  131   SEAEIS  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = -2

Query  1893  TVSSA---PV-------SNRASF  1855
             TV SA   P        S RAS+
Sbjct  79    TVTSAQKNPTAFYLCASSSRASY  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  7673  FLCPTPSR  7650
             +LC   SR
Sbjct  91    YLCASSSR  98


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS Y L
Sbjct  185   DSRYSL  190


>ref|NP_001103824.1|  zona pellucida sperm-binding protein 3 isoform 1 precursor [Homo 
sapiens]
Length=424

 GENE ID: 7784 ZP3 | zona pellucida glycoprotein 3 (sperm receptor)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  256  FSKPSPASRELLWFP  212
            FSKPS       WFP
Sbjct  302  FSKPSNS-----WFP  311


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -1

Query  1963  FDKTSNSPYHFWFP  1922
             F K SNS    WFP
Sbjct  302   FSKPSNS----WFP  311


 Score = 19.3 bits (38),  Expect(2) =  1211
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5345  NRRYSTEE  5368
             NRR  TEE
Sbjct  350   NRRHVTEE  357


 Score = 18.9 bits (37),  Expect(2) =  1211
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +1

Query  5356  LDR-GEQEME  5382
             LDR G++E E
Sbjct  368   LDRRGDHEVE  377


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  6554  LTAVELIL  6531
             LTAV L+L
Sbjct  402   LTAVILVL  409


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6762  VTLVEQN  6782
             VTL EQ+
Sbjct  286   VTLAEQD  292


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3525  LSYKQFI  3545
             LSY  FI
Sbjct  3     LSYRLFI  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -3

Query  245  ESCVERAPLVSL  210
            E C E  PLVS+
Sbjct  76   EAC-E--PLVSM  84


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  8   LVRP-DLSLG  34
           L+R  DL LG
Sbjct  65  LIRAADLTLG  74


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  9093  LVRP-DLSLG  9119
             L+R  DL LG
Sbjct  65    LIRAADLTLG  74


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4836  PDPNAS  4819
             PD NAS
Sbjct  223   PDQNAS  228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  929  HGCL  918
            HGCL
Sbjct  237  HGCL  240


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  712  IRSAKITL  735
            IR A  TL
Sbjct  66   IRAADLTL  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  124  SHNRR  110
            SH RR
Sbjct  331  SHSRR  335


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  516  LG---QLQPSLQTGS  551
            LG   +LQ   +TGS
Sbjct  192  LGDAAHLQAEIHTGS  206


>ref|NP_000237.2|  MHC class II transactivator [Homo sapiens]
Length=1130

 GENE ID: 4261 CIITA | class II, major histocompatibility complex,
transactivator [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +2

Query  1850  QLKEALLDTGAD  1885
             QL EALL+ G D
Sbjct  619   QLSEALLELGED  630


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  29   LGALWL  46
            LGALWL
Sbjct  717  LGALWL  722


 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  9114  LGALWL  9131
             LGALWL
Sbjct  717   LGALWL  722


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  648  LSCLKLP  628
            LSCL LP
Sbjct  217  LSCLNLP  223


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  3459  AFPNLVSLLAA  3427
             AFP LV  L A
Sbjct  972   AFPKLVRILTA  982


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +1

Query  8941  RSTSRTADIELATRD  8985
             RS S   + ELAT D
Sbjct  372   RSSSKSLERELATPD  386


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 14/36 (38%)
 Frame = +2

Query  7382  TVQARQLLSGIVQQQNNLLR-AIEAQ-----QHLLQ  7471
             T  ARQLL         LL  A EA+     QH  Q
Sbjct  800   TLRARQLL--------ELLHCAHEAEEAGIWQHVVQ  827


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  111  RLLCD  125
            RLLCD
Sbjct  80   RLLCD  84


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4507  FPEEL  4493
             FPEEL
Sbjct  147   FPEEL  151


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  4477  LERTSKAPLER  4509
             LER S   LER
Sbjct  370   LERSSSKSLER  380


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5022  QYLAL  5036
             QYLAL
Sbjct  735   QYLAL  739


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  7854  KPTKPPTII  7828
             KP  PPT++
Sbjct  159   KPAEPPTVV  167


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5119  RRPRAT  5136
             RRPR T
Sbjct  408   RRPRET  413


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6415  YGNWLKG  6395
             Y NWL G
Sbjct  747   YDNWLEG  753


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  1785  TVPCLSAPA  1759
             T PCL  PA
Sbjct  181   TLPCLPLPA  189


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  2087  LNFPISPIETVP  2122
             LN P  PI+ VP
Sbjct  220   LNLPEGPIQFVP  231


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7818  FIYH  7807
             FIYH
Sbjct  254   FIYH  257


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5294  LQQLLF  5311
             LQ LLF
Sbjct  465   LQDLLF  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1056  STLQE  1070
             STLQE
Sbjct  673   STLQE  677


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8272  LYYFYN  8255
             LY FY+
Sbjct  47    LYHFYD  52


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8461  MEQSQ  8475
             MEQ Q
Sbjct  571   MEQAQ  575


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 16/37 (43%)
 Frame = +1

Query  8953  RTADIELATRDFP-------LGTFQGGVAWAGLGSGE  9042
             R A+ ELA   FP       LG       W  L SGE
Sbjct  700   RAAESELA---FPSFLLQCFLGAL-----WLAL-SGE  727


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +1

Query  9085  GSLWLDQI*AWELSG  9129
             G LWL       LSG
Sbjct  718   GALWL------ALSG  726


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +3

Query  8514  LE----AQEEEEVG  8543
             LE    A+E EE G
Sbjct  807   LELLHCAHEAEEAG  820


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +1

Query  4816  ETGIW---VRE  4839
             E GIW   V E
Sbjct  818   EAGIWQHVVQE  828


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3950  GIWQ  3961
             GIWQ
Sbjct  820   GIWQ  823


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -2

Query  9132  LARELPGSDLV  9100
             LAR LP  D+V
Sbjct  1064  LARVLP--DMV  1072


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  47    LARELPGSDLV  15
             LAR LP  D+V
Sbjct  1064  LARVLP--DMV  1072


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  559  LDHYIIQ  579
            LD+Y+ Q
Sbjct  101  LDQYVFQ  107


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7071  CMPLP  7085
             C+PLP
Sbjct  184   CLPLP  188


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7613  SNKSLE  7630
             S KSLE
Sbjct  374   SSKSLE  379


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4180  QAGIW  4194
             +AGIW
Sbjct  818   EAGIW  822


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  5488  NKLGNE-----SNTF  5459
             NK G+E     S TF
Sbjct  997   NKIGDEGVSQLSATF  1011


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  453  PCLP  442
            PCLP
Sbjct  183  PCLP  186


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -2

Query  8217  LSKLTALF----FS  8188
             LSK  ALF    FS
Sbjct  557   LSKADALFELSGFS  570


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9018  GHASLESP  8995
             G A L+SP
Sbjct  646   GRAALDSP  653


 Score = 15.5 bits (29),  Expect(2) = 30076
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5125  PRATE  5139
             PRA E
Sbjct  699   PRAAE  703


 Score = 15.1 bits (28),  Expect(2) = 30076
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5193  LLDIFLG  5213
             LL  FLG
Sbjct  712   LLQCFLG  718


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6200  SGRMIMEK  6223
             SG M +EK
Sbjct  197   SGQMRLEK  204


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1490  VPKIASLHH  1464
             VP I  L H
Sbjct  230   VPTISTLPH  238


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7068  AFPTF  7054
             AFP F
Sbjct  707   AFPSF  711


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8844  VSLHGMD  8864
             VSL  MD
Sbjct  1072  VSLRVMD  1078


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1944  ELEVLSK  1964
             +LE LSK
Sbjct  110   QLEGLSK  116


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6379  GLSKGI  6396
             GLSK I
Sbjct  113   GLSKDI  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  9045  GLATPQSRPG  9016
             GL T   RPG
Sbjct  276   GLPTSPDRPG  285


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  8678  VDLPHTRL  8701
             VDL + RL
Sbjct  363   VDLVQARL  370


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4173  RESSRNLE  4196
             R SS  LE
Sbjct  372   RSSSKSLE  379


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  441  WASREL  458
            WA R+L
Sbjct  387  WAERQL  392


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3252  VFPHI  3238
             VF HI
Sbjct  483   VFSHI  487


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = -2

Query  4170  HQQAALTVAPVKLL---PL  4123
             HQ  ALT     LL   PL
Sbjct  590   HQDRALT-----LLRDRPL  603


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5365  GEQEME  5382
             GE+E E
Sbjct  58    GEEEIE  63


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6561  LPFNSS  6544
             +PF SS
Sbjct  210   MPFSSS  215


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8109  GLWNFWDAG  8135
             GLW   +AG
Sbjct  239   GLWQISEAG  247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  524  LSQYL  510
            L QYL
Sbjct  733  LPQYL  737


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7009  CVTSF  6995
             CVT F
Sbjct  881   CVTRF  885


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4809  LYADPN  4792
             LY +P+
Sbjct  64    LYSEPD  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4849  SMETP  4835
             SME P
Sbjct  131   SMEMP  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2482  CSILP  2468
             CS LP
Sbjct  179   CSTLP  183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2228  LPFPSLY  2208
             LP P L+
Sbjct  185   LPLPALF  191


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  1800  LRSLFGNDPSS  1832
             L  LF  +P S
Sbjct  187   LPALFNQEPAS  197


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 11/38 (28%), Positives = 13/38 (34%), Gaps = 19/38 (50%)
 Frame = +2

Query  8105  TRIVELLGRRGWEALKYWWNLLQ---YWSQELKNSAVS  8209
             TR++  LG  G           Q   YW       AVS
Sbjct  413   TRVIAVLGKAG-----------QGKSYWA-----GAVS  434


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3194  QLTEA  3208
             QL EA
Sbjct  619   QLSEA  623


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3635  ESEL  3646
             ESEL
Sbjct  703   ESEL  706


>ref|NP_061985.2|  ATP-binding cassette sub-family A member 7 [Homo sapiens]
Length=2146

 GENE ID: 10347 ABCA7 | ATP-binding cassette, sub-family A (ABC1), member 7
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/28 (39%), Positives = 12/28 (42%), Gaps = 7/28 (25%)
 Frame = +1

Query  55   THCLSLNKACLECFK*cvpvccvTLVTR  138
            T CLSL+K  LE            LV R
Sbjct  404  TECLSLDK--LE-----AAPSEAALVSR  424


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/12 (66%), Positives = 9/12 (75%), Gaps = 2/12 (16%)
 Frame = +2

Query  9140  THCLSLNKACLE  9175
             T CLSL+K  LE
Sbjct  404   TECLSLDK--LE  413


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +1

Query  8125  GTQG--VGSPQIL  8157
             G QG  VG PQ L
Sbjct  1067  GSQGSRVGTPQLL  1079


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  6588  DLSISRTML  6614
             D S+S TML
Sbjct  2085  DFSVSQTML  2093


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 13/30 (43%), Positives = 14/30 (46%), Gaps = 13/30 (43%)
 Frame = -3

Query  8783  WY*L--VAPSKGQW-ISDPW--P-----WC  8724
             WY L  V P  GQ  I +PW  P     WC
Sbjct  749   WY-LEAVCP--GQYGIPEPWNFPFRRSYWC  775


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  7441  PQQIVLLLHYT  7409
             P++ VL L YT
Sbjct  1096  PHELVLVLPYT  1106


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -3

Query  8549  WKTHLLLLL  8523
             W T+L+LLL
Sbjct  4     W-TQLMLLL  11


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 13/34 (38%)
 Frame = -1

Query  976   LSHSA--ASSL--MVSFNICMAA*CPPTVFSMVF  887
             LS  A  ASS   +VS  IC        VF M F
Sbjct  1524  LSEGALMASSVDVLVS--ICV-------VFAMSF  1548


 Score = 19.3 bits (38),  Expect(2) =  3328
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8636  FQSPL  8622
             FQSPL
Sbjct  1721  FQSPL  1725


 Score = 15.9 bits (30),  Expect(2) =  3328
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8633  QSPLF  8619
             Q PLF
Sbjct  1740  QGPLF  1744


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 8/22 (36%)
 Frame = +3

Query  8379  WPTVRERMRRAEPAADRVGAAS  8444
             W   R+R+    PA  RV AAS
Sbjct  677   W---RDRL----PAGGRV-AAS  690


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = +3

Query  4113  YIL------TMAAISPVL  4148
             +IL       MAAI P L
Sbjct  866   FILGHDVRSSMAAIRPHL  883


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +2

Query  3530  LQAIYLALQDSGLE  3571
             L+A    LQ+ GLE
Sbjct  1297  LEAL---LQEAGLE  1307


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
 Frame = -2

Query  4158  ALTVAPVKLLPLSVCIVFT-GHLPANF  4081
             AL    V  L  S+C+VF     PA F
Sbjct  1528  ALMASSVDVL-VSICVVFAMSFVPASF  1553


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = -2

Query  4818  LFLLYADPNMLLL  4780
             LFLL+     LLL
Sbjct  1743  LFLLFT----LLL  1751


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8030  PRIRSL  8013
             PR+RSL
Sbjct  1761  PRVRSL  1766


 Score = 19.3 bits (38),  Expect(2) =  4832
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -1

Query  6406  WLKGYLWTGLCN  6371
             WL  +LW  +CN
Sbjct  1580  WLGNFLW-DMCN  1590


 Score = 15.1 bits (28),  Expect(2) =  4832
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6273  LPLMLVLIL  6247
             LP +L L L
Sbjct  1616  LPALLLLLL  1624


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2378  VFLIELPRSL  2349
             VFL  L RSL
Sbjct  541   VFLRVLSRSL  550


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  6264  MLVLILK  6244
             +LVL+LK
Sbjct  609   LLVLVLK  615


 Score = 18.5 bits (36),  Expect(2) =  5791
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7006  HNHPPMQ  7026
             H HPP++
Sbjct  44    HSHPPLE  50


 Score = 15.5 bits (29),  Expect(2) =  5791
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7077  PLPS  7088
             PLPS
Sbjct  60    PLPS  63


 Score = 17.2 bits (33),  Expect(2) =  6943
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5250  LMGILGQE  5273
             LM   GQE
Sbjct  246   LMELVGQE  253


 Score = 16.3 bits (31),  Expect(2) =  6943
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5122  RPRATEG  5142
             RPR T G
Sbjct  209   RPRGTSG  215


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  108  HTLLEA  91
            H LLEA
Sbjct  181  HSLLEA  186


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 18/28 (64%)
 Frame = -1

Query  4819  SLSPVCRPQYVVITNLASPSGMCTSELI  4736
             SLSP C                  SELI
Sbjct  262   SLSPAC------------------SELI  271


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7733  FLAGFAI  7713
             FLA FA+
Sbjct  631   FLAAFAV  637


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  4636  LILSTCH  4616
             LILST H
Sbjct  991   LILSTHH  997


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1145  KVVEE  1149


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4371  LSPALY  4354
             LSP LY
Sbjct  1574  LSPTLY  1579


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  3080  FLLLSLLMGH  3051
             FLL  LL+ H
Sbjct  1744  FLLFTLLLQH  1753


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3817  FLMFIL  3800
             FL FIL
Sbjct  34    FLFFIL  39


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2746  WCGKSPP  2726
             WCG  PP
Sbjct  774   WCGPRPP  780


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6011  PQEVVLV  6031
             P+E VLV
Sbjct  1096  PHELVLV  1102


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5162  LELLEE  5179
             L LLEE
Sbjct  704   LALLEE  709


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  8544  FPVTPQVPLR  8573
             FP  PQ  LR
Sbjct  816   FPGSPQPALR  825


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 8/26 (30%)
 Frame = +2

Query  7820  LFIMIVGGL----VGLRIVFAVLSIV  7885
             LF  IV  L    VGL  VF    IV
Sbjct  1239  LFAQIV--LPALFVGLALVFSL--IV  1260


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -1

Query  1498  FLW----FLKLPLCII  1463
             FLW    +L  P CI+
Sbjct  1584  FLWDMCNYL-VPACIV  1598


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  6032  LPILLLV----GW  6006
             LP LLL     GW
Sbjct  1616  LPALLLLLLLYGW  1628


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -3

Query  1787  IQ---FLVYRLLL  1758
             IQ   FL + LLL
Sbjct  1739  IQGPLFLLFTLLL  1751


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 12/30 (40%)
 Frame = -3

Query  4349  QSPLFF*NCG*ILPFVLLS*DVQ--PDLLP  4266
             Q PLF       L F LL    Q    LLP
Sbjct  1740  QGPLF-------LLFTLL---LQHRSQLLP  1759


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8394  ERMRRAEPAADR  8429
             +RM    PA DR
Sbjct  1805  QRM----PAVDR  1812


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4870  LYLFF  4856
             L+LFF
Sbjct  33    LFLFF  37


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5216  WLHGL  5230
             WL+GL
Sbjct  69    WLQGL  73


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  149  SEGSLVTR  126
            SE  LV R
Sbjct  417  SEAALVSR  424


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8121  FWDAG  8135
             FWD G
Sbjct  483   FWDPG  487


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3861  GRLKSLAIA  3835
             GRLK L  A
Sbjct  906   GRLKGLSAA  914


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7461  CCCAS  7447
             CCC S
Sbjct  1017  CCCGS  1021


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4140  PVLRLGP  4160
             P LRL P
Sbjct  1267  PALRLSP  1273


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  4792  YVVIT--NL  4772
             YVV T  NL
Sbjct  1648  YVVLTCINL  1656


 Score = 15.5 bits (29),  Expect(2) = 19019
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  8943  PDAALGP  8923
             PD  L P
Sbjct  259   PDSSLSP  265


 Score = 15.5 bits (29),  Expect(2) = 19019
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8833  KLVFSP  8816
             KL F P
Sbjct  294   KLLFAP  299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7567  RATPNPQELL  7538
             R T  P ELL
Sbjct  211   RGTSGPLELL  220


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  265  RARFSKPSPA  236
            R RF  P PA
Sbjct  480  RDRFWDPGPA  489


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8895  TSTLTLLS  8872
             T TL  LS
Sbjct  848   TTTLSILS  855


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8038  LGRSAE  8055
             LGRS E
Sbjct  1432  LGRSVE  1437


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SL IW
Sbjct  1469  DSLKIW  1474


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6979  FSTPST  6962
             FS PST
Sbjct  1641  FSVPST  1646


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -1

Query  3823  VI----FLMFIL  3800
             VI    FL+F L
Sbjct  1738  VIQGPLFLLFTL  1749


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 1/6 (16%)
 Frame = -2

Query  8820  LLYWPL  8803
             LL WPL
Sbjct  29    LL-WPL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  3367  IMVPVRERTHS  3399
             I+V VR   HS
Sbjct  38    ILVAVR---HS  45


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             PQPT  S
Sbjct  141   PQPTKQS  147


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7180  RSEDLGL  7160
             R E LGL
Sbjct  165   RTESLGL  171


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8792  WLNWY  8778
             WL W+
Sbjct  592   WLGWF  596


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  7385  VQARQLLSG  7411
             VQ R+ LSG
Sbjct  935   VQTRH-LSG  942


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4125  LSVCIVFTG  4099
             LSV I F G
Sbjct  948   LSVAIAFVG  956


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = +2

Query  8081  LRDLLLIVTRIVELLGRR  8134
             L  LLL   R   LL RR
Sbjct  1221  LQALLL--KRF--LLARR  1234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5679  HSNHR  5693
             HS HR
Sbjct  1313  HSSHR  1317


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7350  EALWA  7364
             E LWA
Sbjct  1437  EELWA  1441


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8726  CVVLLI  8709
             C+V LI
Sbjct  1596  CIVVLI  1601


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6849  IIVLLF  6832
             I+VL F
Sbjct  1597  IVVLIF  1602


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2048  IIGRNLL  2068
             ++G NLL
Sbjct  1729  VVGKNLL  1735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6678  QEKESVSRE  6704
             +E E V RE
Sbjct  1771  EEDEDVARE  1779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  8117  ELLGR-RG  8137
             ELL R RG
Sbjct  1889  ELLARLRG  1896


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8256  TLSVPSA  8236
             TL VP A
Sbjct  2023  TLRVPAA  2029


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  860  IRRSHP  877
            +R SHP
Sbjct  42   VRHSHP  47


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +3

Query  7923  RPTSQPRGDPT  7955
             R T QP   PT
Sbjct  136   RSTAQP--QPT  144


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8021  RSLIE  8007
             RSL+E
Sbjct  198   RSLVE  202


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6775  STNVTM  6758
             S NV M
Sbjct  342   SSNVAM  347


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5743  LIERA  5757
             L+ERA
Sbjct  509   LVERA  513


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4509  PFQRSF  4492
             PF RS+
Sbjct  768   PFRRSY  773


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  132  YQSHTTD--GH  106
            YQ H T   GH
Sbjct  832  YQGHITAFLGH  842


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5979  PHMPVYPQ  6002
             PH+ V PQ
Sbjct  881   PHLGVCPQ  888


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3462  DMLLIEE  3482
             DML ++E
Sbjct  894   DMLTVDE  900


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +1

Query  8485  QQLPMLLVPG*KHKR----RR  8535
             QQL  LL      KR    RR
Sbjct  1219  QQLQALLL-----KRFLLARR  1234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7528  VSFHSQD  7508
             VSF S+D
Sbjct  1280  VSFFSED  1286


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/36 (33%), Positives = 16/36 (44%), Gaps = 15/36 (41%)
 Frame = +2

Query  8015  VNGSLA---LIWDDLRSLCLFSYHRLRDLLLIVTRI  8113
             +NGS+A   L         LFS + L +    V RI
Sbjct  1660  INGSMATFVLE--------LFSDQKLQE----VSRI  1683


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8165  LLQYWSQ  8185
             LLQ  SQ
Sbjct  1750  LLQHRSQ  1756


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7080  LPSVDKL  7100
             +P VD L
Sbjct  1807  MPAVDRL  1813


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5442  TSSFRL  5425
             TS FR+
Sbjct  1834  TSTFRM  1839


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  306   IFGVLTSR  283
             IF  LT R
Sbjct  1878  IFELLTGR  1885


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  208   RFQVP  194
             RFQ P
Sbjct  2056  RFQLP  2060


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7875  STAKTIL  7855
             STA T+L
Sbjct  2140  STAETVL  2146


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6267  LMLVL  6253
             LML L
Sbjct  7     LMLLL  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2309  RKLVDFREL  2335
             R LV+ R L
Sbjct  198   RSLVELRAL  206


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8142  SHPL  8131
             SHPL
Sbjct  276   SHPL  279


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  771  PDVPF  757
            PD PF
Sbjct  299  PDTPF  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5904  GRKQP  5918
             GR QP
Sbjct  358   GRRQP  362


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = -2

Query  5406  GL*SR-IYWL--------HFLLS  5365
             GL SR + WL         FLLS
Sbjct  585   GL-SRAVLWLGWFLSCLGPFLLS  606


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  235  SRELLW  218
            SR  LW
Sbjct  587  SRAVLW  592


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6884  VTHSF  6898
             VT+SF
Sbjct  640   VTQSF  644


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1543  LAVCP  1529
             L VCP
Sbjct  883   LGVCP  887


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  541   RQDQKN  558
             RQ+ KN
Sbjct  1061  RQEKKN  1066


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2825  IVLP  2836
             IVLP
Sbjct  1243  IVLP  1246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  6763  TMCLSHISYFS  6731
             TM   ++S+FS
Sbjct  1274  TMYGAQVSFFS  1284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5812  PPSPQ  5798
             PP PQ
Sbjct  1366  PPPPQ  1370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  1328  LTIWVRILDQQ  1296
             LT W   LD Q
Sbjct  1458  LTAWAHSLDAQ  1468


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4332  LKLWMN  4315
             LK W N
Sbjct  1471  LKIWFN  1476


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -3

Query  3092  PASVFLLLSLLM  3057
             PA   LLL LL+
Sbjct  1617  PA---LLLLLLL  1625


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  130   VTRDPS  147
             V R+PS
Sbjct  1858  VAREPS  1863


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9135  REPTA  9149
             REP A
Sbjct  1860  REPSA  1864


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5743  LIERAED  5763
             L E AED
Sbjct  183   LLEAAED  189


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 2/7 (28%)
 Frame = +2

Query  2885  LNW--AS  2899
             LNW  AS
Sbjct  238   LNWYEAS  244


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  244  SPASREL  224
            SPA  EL
Sbjct  264  SPACSEL  270


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  1033  PLGSLIW  1013
             PL  L W
Sbjct  278   PLSRLLW  284


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7457  QHLLQL  7474
             Q LLQ+
Sbjct  349   QRLLQM  354


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  7068  QCMPLPSVDKLD  7103
             +C+ L   DKL+
Sbjct  405   ECLSL---DKLE  413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/19 (36%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = +2

Query  5162  LELLEELKNEAVRHFPRIW  5218
             L+LL E       H  R W
Sbjct  426   LQLLAE-------H--RFW  435


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8962  DIELATR  8982
             DI+  TR
Sbjct  469   DIDVVTR  475


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8262  SITLSV  8245
             S+TL V
Sbjct  561   SVTLTV  566


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8829  SLLHPV  8846
             SLL PV
Sbjct  690   SLLSPV  695


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  181  VAPEQ  195
            V PEQ
Sbjct  916  VGPEQ  920


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7456  LRLNSPQQ  7433
             LRL  P Q
Sbjct  1176  LRLKMPPQ  1183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1709  TRRELQ  1726
             TR +LQ
Sbjct  1217  TRQQLQ  1222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  4822  GIWVRESP  4845
             G W  ESP
Sbjct  1334  GNWTPESP  1341


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7360  GRSLND  7377
             GR L D
Sbjct  1384  GRNLSD  1389


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  344   RTHLSP  327
             R HL P
Sbjct  1496  RAHLPP  1501


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8826  TSLLHPVSL  8852
             T L HP  L
Sbjct  1511  TTLNHPLNL  1519


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  414   SFPLALTE  391
             SF L L E
Sbjct  1552  SFTLVLIE  1559


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7065  FPTFC  7051
             FP FC
Sbjct  1691  FPHFC  1695


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1044  AGTTST  1061
             AG TST
Sbjct  1831  AGKTST  1836


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3158  ARMRG  3172
             AR+RG
Sbjct  1892  ARLRG  1896


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1889  TVLEE  1903
             T LEE
Sbjct  2091  TMLEE  2095


>ref|NP_055938.1|  FERM domain-containing protein 4B [Homo sapiens]
Length=1034

 GENE ID: 23150 FRMD4B | FERM domain containing 4B [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  6308  DIIPIDN----DTTSY  6343
             DIIP +     DTT Y
Sbjct  573   DIIPSESSSLSDTTTY  588


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = -1

Query  9040  RHSPVPPRPR-LPGKS  8996
             R S VP  PR LP KS
Sbjct  601   RSSSVPHSPRILPPKS  616


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  2742  HQTKNIRKNL  2771
             H TKNI K L
Sbjct  885   HITKNIHKAL  894


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8652  QRRQDILDL  8678
             Q R+ IL+L
Sbjct  422   QKREKILEL  430


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/37 (32%), Positives = 12/37 (32%), Gaps = 23/37 (62%)
 Frame = +2

Query  6269  GKVQKEY-----------------AFFYKLDIIPIDN  6328
             GK  KEY                 AF  KLD    DN
Sbjct  460   GKMPKEYPLNIGEKPPQVRRRVGTAF--KLD----DN  490


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  952  MRKLQNGIE  978
            M KLQ  IE
Sbjct  542  MKKLQE-IE  549


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  139  DPSDPF  156
            DPSD F
Sbjct  590  DPSDAF  595


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLPSP
Sbjct  989   PLPSP  993


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  4626  LLATQSSP  4603
             +L T+SSP
Sbjct  642   MLSTHSSP  649


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  2386  RRVKKEKISNS  2418
             RR KK+ +S S
Sbjct  764   RRSKKQNVSTS  774


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2554  ERITSNIPK  2580
             E IT NI K
Sbjct  884   EHITKNIHK  892


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  4301  LLS*DVQPDLL  4269
             LL   VQP LL
Sbjct  73    LL---VQPKLL  80


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +1

Query  1471  REAILG--TKERLL  1506
             RE IL    KE LL
Sbjct  424   REKILELKKKEKLL  437


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  4029  KQKLFQQK  4052
             K+KL Q+K
Sbjct  433   KEKLLQEK  440


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7888  IHYRKYSKN  7862
             IH+RK S N
Sbjct  622   IHFRKSSIN  630


 Score = 16.3 bits (31),  Expect(2) = 15839
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8598  LQLPC  8584
             LQ PC
Sbjct  935   LQVPC  939


 Score = 15.9 bits (30),  Expect(2) = 15839
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8552  DWKTHL  8535
             +W T+L
Sbjct  959   NWRTQL  964


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2427  WVMHIFQ  2447
             WVM I Q
Sbjct  347   WVMAISQ  353


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  9002  KVPSGKSL  8979
             K+PS  SL
Sbjct  366   KIPSARSL  373


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1401  PGHKARVLAE  1430
             P +KA VL E
Sbjct  563   PSQKATVLPE  572


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +2

Query  6086  EDII-----SLWD  6109
             EDII     SL D
Sbjct  572   EDIIPSESSSLSD  584


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7448  EAQQHLL  7468
             E Q HLL
Sbjct  696   ESQSHLL  702


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3471  LIEEDKKL  3494
             L+E  KKL
Sbjct  513   LVEAAKKL  520


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2743  CGKSPPQ  2723
             CGK P Q
Sbjct  559   CGKKPSQ  565


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4513  FTFP  4502
             FTFP
Sbjct  595   FTFP  598


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -3

Query  5897  VPHN-----RL  5880
             VPHN     RL
Sbjct  865   VPHNPYATLRL  875


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8283  LQAPCTTS  8260
             LQ PC  S
Sbjct  935   LQVPCSPS  942


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7454  QQHLLQL  7474
             QQ  LQL
Sbjct  110   QQNWLQL  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  5168  LL---EELK  5185
             LL   EELK
Sbjct  441   LLKKVEELK  449


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2696  KIEEL  2710
             K+EEL
Sbjct  444   KVEEL  448


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -1

Query  4030  FYISTGYMNCYQDN  3989
             FY S GY   Y+++
Sbjct  817   FYYSGGYV--YEND  828


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2667  DPTYKSS  2647
             +P Y SS
Sbjct  836   NPSYRSS  842


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2811  HLSGW  2797
             HL GW
Sbjct  898   HLRGW  902


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/36 (33%), Positives = 13/36 (36%), Gaps = 21/36 (58%)
 Frame = -1

Query  7516  SQDS----------CLEL-----LDAPDCELQQMLL  7454
             SQDS           LEL     L      LQ+ LL
Sbjct  413   SQDSEVSEEQKREKILELKKKEKL------LQEKLL  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7388  QARQLLS  7408
             Q R++LS
Sbjct  638   QSREMLS  644


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8720  LHTRARG  8740
             L TR RG
Sbjct  756   LDTRTRG  762


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  362  RGRIRS  379
            RGR RS
Sbjct  761  RGRRRS  766


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8175  YCRRFHQ  8155
             Y R FH+
Sbjct  853   YSRSFHE  859


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3185  DVKQLTE  3205
             DV Q+TE
Sbjct  51    DVYQMTE  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  6551  TAVELILL  6528
             T VEL  L
Sbjct  152   TTVELFFL  159


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5737  DRLIE  5751
             DR IE
Sbjct  224   DRVIE  228


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2339  KRTQDF  2356
             KR QD+
Sbjct  533   KRKQDY  538


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2828  VLPE  2839
             VLPE
Sbjct  569   VLPE  572


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5195  VRHFPRI  5215
             V H PRI
Sbjct  605   VPHSPRI  611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  278  PRLLP  264
            PR LP
Sbjct  609  PRILP  613


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2811  GQYS  2822
             GQYS
Sbjct  831   GQYS  834


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  5343  RIGVTR  5360
             RI V R
Sbjct  318   RISVSR  323


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3500  LTDTT  3514
             L DTT
Sbjct  582   LSDTT  586


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9000  FPGRR  9014
             FPG R
Sbjct  597   FPGQR  601


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4926  SQSNTD  4909
             SQS T+
Sbjct  734   SQSSTE  739


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  815  FYY  807
            FYY
Sbjct  817  FYY  819


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1457  YHNDAERQF  1483
             Y ND E Q+
Sbjct  825   YENDTEGQY  833


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  3382  RERTHSRS  3405
             R+R  SRS
Sbjct  849   RQRDYSRS  856


>pdb|2H32|H  Chain H, Crystal Structure Of The Pre-B Cell Receptor
Length=223


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 11/26 (42%)
 Frame = +2

Query  5885  YYGVPVWKEATT-----------TLF  5929
             YYG  VW + TT           TLF
Sbjct  103   YYGMDVWGQGTTVTVSSWSASAPTLF  128


 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 14/34 (41%)
 Frame = -1

Query  6709  WSSL---DTDSFSCIVVGSCTINFYRCVQLYYYG  6617
             WSSL   DT  + C         +Y     YYYG
Sbjct  83    WSSLKASDTAMYYC------ARHYY-----YYYG  105


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4903  SWSAS  4889
             SWSAS
Sbjct  119   SWSAS  123


 Score = 17.2 bits (33),  Expect(2) = 15986
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1694  WSALK  1680
             WS LK
Sbjct  83    WSSLK  87


 Score = 16.3 bits (31),  Expect(2) = 15986
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1613  TIFHLVS  1593
             T F LVS
Sbjct  126   TLFPLVS  132


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = -2

Query  5127  WSSGACSIYPLSVS  5086
             WS  A   +PL VS
Sbjct  120   WSASAPTLFPL-VS  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2710  ETTSVEVG  2733
             +T SV VG
Sbjct  139   DTSSVAVG  146


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7282  SGAERKK  7302
             SGAE KK
Sbjct  7     SGAEVKK  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9081  YWVSLVR  9101
             YW+  VR
Sbjct  32    YWIGWVR  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4532  DNSDI  4546
             +NSDI
Sbjct  165   NNSDI  169


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3750  SVLESGKY  3773
             SVL  GKY
Sbjct  177   SVLRGGKY  184


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2897  LPNSI  2883
             LP+SI
Sbjct  153   LPDSI  157


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +1

Query  8962  DIELATRDFP  8991
             DI   TR FP
Sbjct  168   DIS-STRGFP  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1745  NSPSE  1759
             NSPS+
Sbjct  135   NSPSD  139


>ref|NP_149084.2|  tripartite motif-containing protein 5 isoform delta [Homo sapiens]
Length=326

 GENE ID: 85363 TRIM5 | tripartite motif-containing 5 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +3

Query  918  QAAMQMLKETINEEAAE  968
            QAA++ML +   +EA E
Sbjct  143  QAALEMLRQK-QQEAEE  158


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1911  CQEDG  1925
             CQEDG
Sbjct  106   CQEDG  110


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1446  TNSATIMMQ  1472
             TNS T M Q
Sbjct  215   TNSETEMVQ  223


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6023  VLVNVTE  6043
             +LVNV E
Sbjct  5     ILVNVKE  11


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3436  VSCPIYIE  3413
             V CPI  E
Sbjct  13    VTCPICLE  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3632  SESELVNQ  3655
             SE E+V Q
Sbjct  217   SETEMVQQ  224


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8874  REVLEW  8891
             R++L+W
Sbjct  189   RDILDW  194


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7925  SETIMV  7908
             SET MV
Sbjct  217   SETEMV  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 18/39 (46%)
 Frame = -1

Query  523  CPSICL----QP-S-DVSNRPG-------LTANRSSSLL  446
            CP ICL    QP S D     G       LTAN   S+L
Sbjct  15   CP-ICLELLTQPLSLDC----GHSFCQACLTANHKKSML  48


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  8080  LERLT----LDC  8103
             LE LT    LDC
Sbjct  19    LELLTQPLSLDC  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5133  HRGSHT  5150
             HRG HT
Sbjct  123   HRGHHT  128


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8960  AVLEVLR  8940
             A LE LR
Sbjct  144   AALEMLR  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -3

Query  1709  WGCWLWSAL  1683
             WG   WSA+
Sbjct  298   WG---WSAM  303


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3830  WRAMA  3844
             W AMA
Sbjct  300   WSAMA  304


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8254  PICPLSY  8234
             P+C  SY
Sbjct  56    PVCRISY  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5924  LFCASDAK  5947
             LFC  D K
Sbjct  104   LFCQEDGK  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2837  EKDSW  2851
             EK SW
Sbjct  166   EKASW  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5353  LLDRGE  5370
             +LD GE
Sbjct  47    MLDKGE  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QE EE
Sbjct  154   QEAEE  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE  EEE++
Sbjct  203   LE-KEEEDI  210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4451  KPENF  4437
             KPE F
Sbjct  264   KPETF  268


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2816  VQPIVLPE  2839
             +Q I LP+
Sbjct  316   IQAILLPQ  323


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8081  LRDLL  8095
             LRD L
Sbjct  188   LRDIL  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1565  KGLLE  1579
             KG+LE
Sbjct  282   KGMLE  286


>ref|NP_115582.3|  protein NLRC5 [Homo sapiens]
Length=1866

 GENE ID: 84166 NLRC5 | NLR family, CARD domain containing 5 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 13/34 (38%)
 Frame = -3

Query  3101  GLAPASVFLL---LSL--------LMG--HNTLH  3039
             GL P S FLL   LSL        L    H TLH
Sbjct  1174  GLSPKSPFLLANTLSLCPRVKKVDLRSLHHATLH  1207


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  1274  KKLDDRNLVGPK  1309
             KKL  R L GPK
Sbjct  600   KKLATRKLTGPK  611


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6621  MVLALS  6604
             MVLALS
Sbjct  442   MVLALS  447


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  5111  QAPEDQ-GPQ  5137
             Q PE+Q GPQ
Sbjct  946   QEPEEQKGPQ  955


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/18 (50%), Positives = 12/18 (66%), Gaps = 4/18 (22%)
 Frame = +1

Query  8407  ELSQQQIGWE---QHLET  8451
             +LS+ QIG +   QHL T
Sbjct  1612  DLSHNQIG-DAGVQHLAT  1628


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  228   SLDAGLGL  251
             SLDA LGL
Sbjct  1045  SLDAVLGL  1052


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/17 (58%), Positives = 11/17 (64%), Gaps = 3/17 (17%)
 Frame = +1

Query  8062  PLQLPPLERL--TL-DC  8103
             PL+ P L RL  TL DC
Sbjct  1118  PLEPPSLTRLCATLKDC  1134


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1664  SLVGRP  1647
             SLVGRP
Sbjct  1373  SLVGRP  1378


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -2

Query  6477  VPLN--VLLL  6454
             VPL+  VLLL
Sbjct  82    VPLDLEVLLL  91


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3317  LANTLS  3300
             LANTLS
Sbjct  1183  LANTLS  1188


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5025  IVEILP  5008
             IVE+LP
Sbjct  762   IVEVLP  767


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7636  NLFQRFITP  7610
             NL  RF TP
Sbjct  265   NLITRFLTP  273


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = -2

Query  3867  TGGRLKSL-AI-AL  3832
             T GRL SL A+ AL
Sbjct  395   TNGRLRSLCAVPAL  408


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = +2

Query  6155  LKCTDLKNDTNTNSSSGRMIME  6220
             L CTDL   T TN      I+E
Sbjct  646   LTCTDL--ATLTN------ILE  659


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6134  LTPLCVSLK  6160
             LT LC  LK
Sbjct  1124  LTRLCATLK  1132


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6044  FLSHL  6030
             FLSHL
Sbjct  576   FLSHL  580


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6696  SREDQ  6710
             SREDQ
Sbjct  1319  SREDQ  1323


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8711  LAELH  8725
             LAELH
Sbjct  928   LAELH  932


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2946  LRSLH  2932
             LRSLH
Sbjct  1198  LRSLH  1202


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  988   TGCTLSH  968
             TGC LS+
Sbjct  1223  TGCSLSQ  1229


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5433  FRLTS  5419
             FRLTS
Sbjct  1499  FRLTS  1503


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +2

Query  6542  QLLLNGS-LA  6568
             +LLLN S LA
Sbjct  1559  HLLLNSSTLA  1568


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7500  WSCL  7489
             WSCL
Sbjct  14    WSCL  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 8/26 (30%)
 Frame = +1

Query  7630  TDLESHD--LDGVGQR---N*QLHKL  7692
             TDL+S +  LD   QR     QL KL
Sbjct  39    TDLDSRNETLD-PEQRVIL--QLNKL  61


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5107  GTSPRR  5124
             G SPRR
Sbjct  128   GSSPRR  133


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8808  PLLSYLAQ  8785
             P LS LAQ
Sbjct  575   PFLSHLAQ  582


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  1416  RVLAEAMSQ  1442
             R +AEA SQ
Sbjct  888   RLMAEAASQ  896


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7339  QEPKEQ  7322
             QEP EQ
Sbjct  946   QEPEEQ  951


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2702  EELRQHL  2722
             +EL QHL
Sbjct  1684  QELPQHL  1690


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3217  FLHCLC  3200
             F HC C
Sbjct  72    FIHCVC  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -2

Query  6819  LNLLAICFKVLFHF  6778
             LN    CF  LF F
Sbjct  250   LN----CFQALFLF  259


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2321  DFRELN  2338
             +FR+LN
Sbjct  260   EFRQLN  265


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7070  LLFLLS  7053
             L FLLS
Sbjct  810   LIFLLS  815


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2475  ILHLPY  2492
             +LHLP+
Sbjct  1692  VLHLPF  1697


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1895  LEEMSL  1912
             LEE SL
Sbjct  1718  LEEISL  1723


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  666   FCFALPL  646
             FC  LPL
Sbjct  1735  FCMELPL  1741


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4636  GLEHGKV  4656
             GLE GKV
Sbjct  467   GLETGKV  473


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -3

Query  935  HLH--GCLMSPHC  903
            HL   GC + PHC
Sbjct  666  HLDFDGCPLEPHC  678


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = -1

Query  7516  SQDSCLELLDA-PDC  7475
             SQ+S L LL+  P C
Sbjct  1284  SQESALYLLETLPSC  1298


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  7448  EAQQHL-LQL  7474
             E QQ+L  QL
Sbjct  1417  ETQQQLCVQL  1426


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8598  DLSHFL  8615
             DLSH L
Sbjct  1556  DLSHLL  1561


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -2

Query  1920  LPG-----KL-ISSNTVSSA  1879
             LPG     K   S N +SSA
Sbjct  1630  LPGLPELRKIDLSGNSISSA  1649


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4274  DQAEHLK  4294
             D A+HLK
Sbjct  1839  DMAQHLK  1845


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8053  EPVPLQL  8073
             +PV LQL
Sbjct  2     DPVGLQL  8


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8963  TSSLL  8977
             TSSLL
Sbjct  454   TSSLL  458


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2007  LCPQ  1996
             LCPQ
Sbjct  740   LCPQ  743


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6839  KTIIF  6853
             KT+IF
Sbjct  938   KTVIF  942


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3201  VNCFTSLVW  3175
             V CF  L W
Sbjct  1053  VRCFSTLQW  1061


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8892  STLTLL  8875
             STL LL
Sbjct  1565  STLALL  1570


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8875  LSGSSI  8858
             LSG SI
Sbjct  1641  LSGNSI  1646


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/33 (33%), Positives = 12/33 (36%), Gaps = 16/33 (48%)
 Frame = -2

Query  1683  EENSLAFPCRKARSSLKN*PVSQYNLSFGVLPF  1585
             EE SLA                + NL  GVL F
Sbjct  1719  EEISLA----------------ENNLAGGVLRF  1735


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2871  FCMSL  2857
             FCM L
Sbjct  1735  FCMEL  1739


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2289  FFMANT  2272
             FF+ NT
Sbjct  34    FFLPNT  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1131  IILGLNK  1151
             +IL LNK
Sbjct  54    VILQLNK  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  9004  GKSPAESPL  8978
             GKS  ES L
Sbjct  108   GKSQPESQL  116


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3075  QKYRS  3089
             Q YRS
Sbjct  157   QRYRS  161


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5014  DLYNT  5028
             DL+NT
Sbjct  211   DLFNT  215


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1564  FLGALQFLA  1538
             FL AL+ +A
Sbjct  520   FLAALHLMA  528


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -3

Query  2549  PVEAHCTDI*SLV  2511
             P E HC +   LV
Sbjct  673   PLEPHCPE--ALV  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8973  KLDVSS  8956
             KLD SS
Sbjct  774   KLDLSS  779


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3899  KCQL  3910
             KCQL
Sbjct  851   KCQL  854


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6746  MRQAHC  6763
             MR  HC
Sbjct  979   MRLTHC  984


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8601  DLQLPC  8584
             +LQL C
Sbjct  1139  ELQLSC  1144


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8132  CVPEVP  8115
             C P+VP
Sbjct  1266  CLPQVP  1271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/26 (34%), Positives = 9/26 (34%), Gaps = 11/26 (42%)
 Frame = -2

Query  3903  HLSQLATISFATTGGRLKSLAIALQL  3826
             H S LAT            L   LQL
Sbjct  1339  HVSRLAT-----------GLSKSLQL  1353


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6548  AVELILL  6528
             A E ILL
Sbjct  1769  ALEVILL  1775


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6620  IIVQLN  6637
             +I QLN
Sbjct  54    VILQLN  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6859  ILRR  6870
             ILRR
Sbjct  180   ILRR  183


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2414  LLIF  2403
             LLIF
Sbjct  303   LLIF  306


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  915  VPPLC-LAWCL  886
            VP LC  A CL
Sbjct  405  VPALCQVA-CL  414


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  6105  HKLIISSCIC  6076
             H L  S C+C
Sbjct  491   HSLLTSFCVC  500


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4176  PAHQQ  4162
             P HQQ
Sbjct  503   PGHQQ  507


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1324  QSGFAF  1307
             Q G+AF
Sbjct  507   QTGYAF  512


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4068  AVSCP  4054
             AV CP
Sbjct  794   AVTCP  798


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4058  QETAYFLL  4081
             QE A +LL
Sbjct  1285  QESALYLL  1292


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -2

Query  7584  VQMSFP---EQPQ  7555
             VQ+ FP   E P+
Sbjct  1424  VQLEFPRQEENPE  1436


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2080  LHFKFSH  2100
             LH  FSH
Sbjct  1693  LHLPFSH  1699


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  296   TPKILTS  316
             T K LTS
Sbjct  1756  TAKLLTS  1762


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = -2

Query  8820  LLYWPLL-----SYLAQLVL  8776
             LL W LL       LAQ VL
Sbjct  1774  LLSWNLLGDEAAAELAQ-VL  1792


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  6092  IISLWDQSLKPC  6127
             +I LW+    PC
Sbjct  1828  VIRLWNNPI-PC  1838


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7498  PGKNPGC  7518
             PGK P C
Sbjct  348   PGKLPAC  354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2815  CPFIRM  2798
             CP +RM
Sbjct  797   CPTVRM  802


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = +3

Query  516   LGQLQPSLQTGSEELRSL  569
             L QL P L  G   L SL
Sbjct  1024  LAQLLPGL--GA--LQSL  1037


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7293  LCTTL  7279
             LC TL
Sbjct  1127  LCATL  1131


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2465  SLHLREL  2445
             SL+L EL
Sbjct  1350  SLQLTEL  1356


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3038  VLVLLE  3021
             VL LLE
Sbjct  1396  VLSLLE  1401


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5917  HHSIL  5931
             HHS L
Sbjct  1450  HHSLL  1454


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1819  LPKSDL  1802
             LP  DL
Sbjct  36    LPNTDL  41


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4634  HPVYLP  4617
             H VY P
Sbjct  173   HQVYVP  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3945  VQEYGN  3962
             V+EY N
Sbjct  372   VEEYVN  377


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5986  CLCTH  6000
             CLC H
Sbjct  413   CLCLH  417


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  338  HLSPSSL  318
            HL  SSL
Sbjct  451  HLPTSSL  457


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9074  LPVLGLSG  9097
             L  LGL G
Sbjct  716   LQMLGLAG  723


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7871  VLSIV  7885
             VL IV
Sbjct  759   VLNIV  763


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2368  LNFPEVL  2348
             LN  EVL
Sbjct  760   LNIVEVL  766


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5276  EAIIRILQQ  5302
             EA I  LQ+
Sbjct  860   EALIALLQE  868


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4808  RRKRL  4822
             RR RL
Sbjct  977   RRMRL  981


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  2850  QLSFSGSTIG  2821
             +L FSG   G
Sbjct  1008  HLDFSGNALG  1017


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  2946  LRSLHNCLTLIP  2911
             LR L  CL  +P
Sbjct  1260  LRCLLECLPQVP  1271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4076  LLKLAGR  4096
             LL L GR
Sbjct  1371  LLSLVGR  1377


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7433  LLRAIE  7450
             L+RA E
Sbjct  1542  LMRALE  1547


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1531  PSLPQL  1514
             P LP+L
Sbjct  1631  PGLPEL  1636


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8321  LERILL  8338
             LE ILL
Sbjct  1770  LEVILL  1775


>gb|ABG38389.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=114


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  54   DVSNRPSGVSNR  65


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  59   PSGVSNR  65


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  44    PGK---------APKLMIYDVSNRPSGVSNRFS  67


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  13    SGSPGQSITISCT  25


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 6/18 (33%)
 Frame = -1

Query  8311  YSSRYVANSSTSSLYYFY  8258
             Y S Y   SS      FY
Sbjct  91    YCSSYTSSSS------FY  102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  78    TISGLQAED  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  64    NRFSGSK  70


>gb|ABG38388.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=111


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  52   DVSNRPSGVSNR  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  42    PGK---------APKLMIYDVSNRPSGVSNRFS  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 6/18 (33%)
 Frame = -1

Query  8311  YSSRYVANSSTSSLYYFY  8258
             Y S Y   SS      FY
Sbjct  89    YCSSYTSSSS------FY  100


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


>gb|ABG38356.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=110


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  52   DVSNRPSGVSNR  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  42    PGK---------APKLMIYDVSNRPSGVSNRFS  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


>gb|ABG38385.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  51   DVSNRPSGVSNR  62


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  56   PSGVSNR  62


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  5     QPPSVS  10


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  41    PGK---------APKLMIYDVSNRPSGVSNRFS  64


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  10    SGSPGQSITISCT  22


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6999  EVTQSPS  7019
             E TQ PS
Sbjct  2     ELTQPPS  8


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 6/18 (33%)
 Frame = -1

Query  8311  YSSRYVANSSTSSLYYFY  8258
             Y S Y   SS      FY
Sbjct  88    YCSSYTSSSS------FY  99


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  75    TISGLQAED  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  61    NRFSGSK  67


>gb|ABG38358.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=110


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  52   DVSNRPSGVSNR  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  42    PGK---------APKLMIYDVSNRPSGVSNRFS  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


>pdb|3CU7|A  Chain A, Human Complement Component 5
 pdb|3CU7|B  Chain B, Human Complement Component 5
 pdb|3KLS|A  Chain A, Structure Of Complement C5 In Complex With Ssl7
 pdb|3KLS|B  Chain B, Structure Of Complement C5 In Complex With Ssl7
 pdb|3KM9|A  Chain A, Structure Of Complement C5 In Complex With The C-Terminal 
Beta-Grasp Domain Of Ssl7
 pdb|3KM9|B  Chain B, Structure Of Complement C5 In Complex With The C-Terminal 
Beta-Grasp Domain Of Ssl7
 gb|AAI13739.1|  Complement component 5 [Homo sapiens]
 gb|EAW87480.1|  complement component 5 [Homo sapiens]
Length=1676


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2177  EEKIKALVE  2203
             EE  KALVE
Sbjct  1436  EEDLKALVE  1444


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1632  FLGKIW  1649
             FLGK W
Sbjct  12    FLGKTW  17


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  2507  ETPGIRYQYNVL  2542
             E PGI Y   VL
Sbjct  341   EIPGIKY---VL  349


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6504  TVLTFV  6487
             TVLTF+
Sbjct  159   TVLTFI  164


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6851  RLLFYYFQIV  6822
             RLL YY  IV
Sbjct  539   RLLVYY--IV  546


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4553  VPRRK  4567
             VPRRK
Sbjct  780   VPRRK  784


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7379  LTVQARQL  7402
             LT+Q  QL
Sbjct  85    LTIQPKQL  92


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             N L HLP
Sbjct  998   NILTHLP  1004


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1251  LLEFYRTG  1228
             LL+ Y TG
Sbjct  1581  LLDIYKTG  1588


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  1990  YEYLIILS  1967
             Y YL ILS
Sbjct  499   YNYL-ILS  505


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2357  WEVQL  2371
             WEV+L
Sbjct  775   WEVHL  779


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4759  GMCTSE  4742
             G CTSE
Sbjct  864   GICTSE  869


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +3

Query  7209  EVNYIN--IK  7232
             ++NY+N  IK
Sbjct  1263  DINYVNPVIK  1272


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             LDL IS
Sbjct  1539  LDLTIS  1544


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1033  PLGSLIW  1013
             PL SL W
Sbjct  1638  PLDSLTW  1644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1786  YSSLS  1772
             YSSLS
Sbjct  457   YSSLS  461


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  5110  FHLSSVSFVT  5081
             FHL    F T
Sbjct  646   FHLAGLTFLT  655


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 19/40 (47%)
 Frame = +2

Query  7154  NNES--EIFRPGGGDMRDNWRS------EL---YKYKVVK  7240
             N+E   EI RP     R   R       E    YK  VVK
Sbjct  665   NDEPCKEILRP-----R---RTLQKKIEEIAAKYKHSVVK  696


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  2690  RT---KIEE  2707
             RT   KIEE
Sbjct  677   RTLQKKIEE  685


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = -3

Query  245  ESCVERAPLVSLSLSGP  195
            E C +RA  +SL   GP
Sbjct  709  ETCEQRAARISL---GP  722


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4317  NTAICTA  4297
             NT IC A
Sbjct  806   NTGICVA  812


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  172   IFHTD  158
             IFH D
Sbjct  1033  IFHSD  1037


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3524  SSDLLC  3507
             SSD LC
Sbjct  1469  SSDFLC  1474


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5316  IFRIG  5330
             IFR+G
Sbjct  30    IFRVG  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  5165  EL----LEELKN  5188
             EL    LE+L N
Sbjct  309   ELSYYSLEDLNN  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4808  RRKRLAF  4828
             RRK L F
Sbjct  782   RRKQLQF  788


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  792   DSLTTW  797


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  6405  QFPYII----VP  6428
             +FPY I    VP
Sbjct  958   EFPYRIPLDLVP  969


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2126  KLKPGM  2143
             KLK GM
Sbjct  1048  KLKEGM  1053


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1223  IVSKGF  1206
             IVS GF
Sbjct  1347  IVSTGF  1352


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2244  IFEIF  2230
             IFE F
Sbjct  1479  IFELF  1483


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1958  IKVRQYDQILI  1990
             +K RQY   LI
Sbjct  1612  VKGRQY---LI  1619


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5018  RSYLVM  5001
             R YL+M
Sbjct  1615  RQYLIM  1620


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3812  HVHL  3801
             HVHL
Sbjct  70    HVHL  73


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +2

Query  2411  VTVLDVGDAYFSV  2449
             VTVL+     F V
Sbjct  428   VTVLE-----FNV  435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4470  IHFG  4481
             IHFG
Sbjct  510   IHFG  513


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  769   FPESW  773


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3209  LPLLIVLH  3186
             LPL I LH
Sbjct  901   LPLEIGLH  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9086  PVQAKSSCLY  9057
             PV+A    LY
Sbjct  1134  PVEARENSLY  1143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8825  VLSFI  8811
             VL FI
Sbjct  160   VLTFI  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7572  FPEQPQIP  7549
             F E+ +IP
Sbjct  336   FSEEAEIP  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3173  AHTNDVKQ  3196
             A+T DV Q
Sbjct  392   AQTIDVNQ  399


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5799  CGDGGG  5816
             CG GGG
Sbjct  634   CGAGGG  639


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  4294  LK--MFSLISY  4268
             LK  M S  SY
Sbjct  1049  LKEGMLSIMSY  1059


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8879  FSLRV  8865
             F LRV
Sbjct  1081  FALRV  1085


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7003  TSFSVI  6986
             T F VI
Sbjct  1145  TAFTVI  1150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2781  QRNGGSF  2761
             QR GG F
Sbjct  1278  QRYGGGF  1284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +3

Query  7089  VDKL-------DVHQILQ  7121
             VD L       D H ILQ
Sbjct  1446  VDQLFTDYQIKDGHVILQ  1463


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6620  IIVQLN  6637
             +I QLN
Sbjct  1460  VILQLN  1465


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  290  VSTPKI  307
            +S PKI
Sbjct  25   ISAPKI  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7383  VSVIE  7369
             V VIE
Sbjct  327   VTVIE  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  8142  KPSNIGGISYSI  8177
             KP    GI Y I
Sbjct  364   KP----GIPYPI  371


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8733  PGVRYP  8750
             PG+ YP
Sbjct  365   PGIPYP  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5194  SFILKL  5177
             SF+L L
Sbjct  419   SFVLNL  424


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 11/36 (30%), Positives = 12/36 (33%), Gaps = 18/36 (50%)
 Frame = +2

Query  4565  KAKIIRDYGKQMAGDDCVASRQDED*NMEKFSKTPY  4672
             K KII  +G           R       EKFS   Y
Sbjct  506   KGKIIH-FG----------TR-------EKFSDASY  523


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3812  HVHLGP  3795
             +VHL P
Sbjct  572   QVHLSP  577


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3147  VFRFL  3133
             VF FL
Sbjct  623   VFQFL  627


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  489  ETSEGCRQIL  518
            E  E C +IL
Sbjct  664  ENDEPCKEIL  673


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8331  FCYKM  8345
             FC KM
Sbjct  855   FCVKM  859


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4358  CTPQSP  4341
             CT +SP
Sbjct  866   CTSESP  871


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +1

Query  6688  NPYPERTRESIC  6723
             N Y E    SIC
Sbjct  1090  NKYVEQNQNSIC  1101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4225  YSLTLG  4208
             Y L LG
Sbjct  1193  YALSLG  1198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  5862  VALQIINIPRS  5830
             V LQ   IP S
Sbjct  1460  VILQLNSIPSS  1470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7156  VAITTI  7139
             V IT I
Sbjct  1563  VSITSI  1568


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -1

Query  6901  IKTVRYNF  6878
             IK   YNF
Sbjct  1627  IK---YNF  1631


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1614  YNLSF  1600
             YN SF
Sbjct  1629  YNFSF  1633


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8965  CQQFL  8951
             CQ FL
Sbjct  1657  CQAFL  1661


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7071  IAFPTF  7054
             I FP F
Sbjct  183   ISFPDF  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4708  DITMKA  4725
             +IT KA
Sbjct  247   EITIKA  252


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             YLY D
Sbjct  464   YLYID  468


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  715  RSAKITL  735
            R A I L
Sbjct  714  RAARISL  720


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6530  VVSTQL  6547
             VV  QL
Sbjct  733   VVASQL  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  786   LQFAL  790


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4386  IMSTILS  4366
             I+S +LS
Sbjct  987   ILSAVLS  993


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7030  YSAWEG  7013
             YS W G
Sbjct  1066  YSVWKG  1071


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2284  KEKRQY  2301
             KE  QY
Sbjct  1119  KENSQY  1124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2549  PVEA  2538
             PVEA
Sbjct  1134  PVEA  1137


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5460  FTIAI  5446
             FT AI
Sbjct  1186  FTLAI  1190


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  8681  PQIKDILSSL  8652
             PQ   I S L
Sbjct  1203  PQFRSIVSAL  1212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2555  KGSPAIF  2575
             KG P I+
Sbjct  1219  KGNPPIY  1225


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1131  IILGLNKI  1154
             +IL LN I
Sbjct  1460  VILQLNSI  1467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4040  IPAETGQETA  4069
             I AET  +TA
Sbjct  1543  ISAETRKQTA  1552


>ref|NP_001120934.1|  NACHT, LRR and PYD domains-containing protein 3 isoform d [Homo 
sapiens]
Length=979

 GENE ID: 114548 NLRP3 | NLR family, pyrin domain containing 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 16/31 (51%)
 Frame = +3

Query  1092  NPPIPVGEIYKRWIILGLNKIVRMYSPTSIL  1184
             NPPI               KIVR   P  IL
Sbjct  284   NPPI--------------HKIVRK--PSRIL  298


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3000  NWQKTER  3020
             +WQK ER
Sbjct  321   DWQKAER  327


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +3

Query  4569  QRSLG--IM  4589
             QRSLG  IM
Sbjct  269   QRSLGDLIM  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5299  TTAVYPF  5319
             TTAVY F
Sbjct  439   TTAVYVF  445


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6143  LCVSLK---CTDLK  6175
             LCV LK   C +LK
Sbjct  761   LCVGLKHLLC-NLK  773


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  2718  CCLSSSIFVLCC  2683
             CCL S     CC
Sbjct  780   CCLTSA----CC  787


 Score = 18.5 bits (36),  Expect(2) =  3569
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7123  AAINKR  7140
             AAIN R
Sbjct  76    AAINRR  81


 Score = 17.2 bits (33),  Expect(2) =  3569
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7062  EKQCMPLP  7085
             +K C PLP
Sbjct  35    QKGCIPLP  42


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 11/21 (52%)
 Frame = +1

Query  2167  AIDRRKNKSISRNLY----RD  2217
             AI+R       R+LY    RD
Sbjct  77    AINR-------RDLYEKAKRD  90


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  7113  FDEHLICPL  7087
             FDEH I PL
Sbjct  311   FDEH-IGPL  318


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8093  LLIVTRIVEL  8122
             LLI TR V L
Sbjct  346   LLITTRPVAL  355


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4914  YYFDCFSDSA  4943
             Y+F  FSD A
Sbjct  381   YFFKYFSDEA  390


 Score = 16.8 bits (32),  Expect(2) =  9406
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 1/8 (12%)
 Frame = -2

Query  3195  CFTSLV-W  3175
             CF  LV W
Sbjct  409   CFIPLVCW  416


 Score = 16.8 bits (32),  Expect(2) =  9406
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF L SLL
Sbjct  444   VFFLSSLL  451


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1908  VCQED  1922
             +CQED
Sbjct  107   ICQED  111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9139  SLVSQR  9122
             SLV QR
Sbjct  265   SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  54   SLVSQR  37
            SLV QR
Sbjct  265  SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 7/22 (31%), Gaps = 13/22 (59%)
 Frame = -2

Query  5289  LIMASTPAQVSP*VS*ICCPKP  5224
             LIM              CCP P
Sbjct  275   LIMS-------------CCPDP  283


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  7520  ERYLKDQQLLGI  7555
             ER   +Q+LL I
Sbjct  182   ER---EQELLAI  190


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  6066  SFFHMLKFSVTF  6031
             SF HM     TF
Sbjct  519   SFIHM-----TF  525


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  8670  GYLVF-----FG  8650
             GYL+F     FG
Sbjct  571   GYLIFVVRFLFG  582


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = -2

Query  1029  LVLSSG--LVQ*ALHALD  982
             LVLSS   LV+     LD
Sbjct  735   LVLSSNQKLVE-----LD  747


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2238  QKLGL  2252
             QKLGL
Sbjct  830   QKLGL  834


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  9065  SCFLPVLGLS  9094
             SC L  LGLS
Sbjct  940   SCLLQNLGLS  949


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5990  CVPTDPNP  6013
             C P DPNP
Sbjct  279   CCP-DPNP  285


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2350  LSSLI  2336
             LSSLI
Sbjct  332   LSSLI  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6911  EFFYC  6925
             E FYC
Sbjct  629   ELFYC  633


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  952  LMVSFN  935
            LM+ FN
Sbjct  57   LMIDFN  62


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  698  HRTQQ  712
            HR QQ
Sbjct  177  HRSQQ  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1003  IGPACT  986
             IGP CT
Sbjct  315   IGPLCT  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2644  VLIDNY  2627
             VL +NY
Sbjct  560   VLLENY  565


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3351  VLTNSHS  3331
             VL  SHS
Sbjct  793   VLSTSHS  799


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  6674  CCW  6666
             CCW
Sbjct  900   CCW  902


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2915  SLGKSDL  2895
             SLG  DL
Sbjct  918   SLGNNDL  924


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 11/18 (61%)
 Frame = -1

Query  784  LGD---MA*CTICPWMFC  740
            LGD   M        MFC
Sbjct  924  LGDLGVM--------MFC  933


 Score = 15.5 bits (29),  Expect(2) = 31987
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7587  LLCLGML  7607
             LLC G+L
Sbjct  874   LLCEGLL  880


 Score = 15.1 bits (28),  Expect(2) = 31987
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7690  LNTLL  7704
             L TLL
Sbjct  904   LSTLL  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1730  WGRDN  1744
             WG DN
Sbjct  94    WGSDN  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2096  PISPI  2110
             P+SPI
Sbjct  199   PVSPI  203


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6990  LFDP  6979
             LFDP
Sbjct  208   LFDP  211


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7442  AIEAQQHLL  7468
             A E  QHLL
Sbjct  354   ALEKLQHLL  362


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6415  YGNWLKGYL  6389
             YG   KGYL
Sbjct  565   YGKFEKGYL  573


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6239  CSFNIS  6256
             C F+IS
Sbjct  729   CCFDIS  734


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  879  QDLNTMLNT  905
            QDL   L T
Sbjct  788  QDLASVLST  796


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3847  TSHC  3836
             TSHC
Sbjct  897   TSHC  900


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5834  LGMLMIC  5854
             LG +M C
Sbjct  927   LGVMMFC  933


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1162  CIALP  1176
             CI LP
Sbjct  38    CIPLP  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6125  MALGFDP  6105
             M L FDP
Sbjct  205   MELLFDP  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = -1

Query  2809  FIRM---EF  2792
             FI M   EF
Sbjct  520   FIHMTFQEF  528


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3471  LIEEDK  3488
             L EE+K
Sbjct  535   LLEEEK  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  194  RDLKAKGKPEE  226
            RDL  K K +E
Sbjct  81   RDLYEKAKRDE  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2071  SQQI  2060
             SQQI
Sbjct  601   SQQI  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  766  IRPYHLEL  789
            I P +LEL
Sbjct  623  IQPSQLEL  630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8962  DIELATR  8982
             +I L TR
Sbjct  654   EINLSTR  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6229  LSFLH  6215
             L FLH
Sbjct  681   LGFLH  685


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3317  LANTLST  3297
             LA  LST
Sbjct  790   LASVLST  796


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  994   QGLLH  1008
             +GLLH
Sbjct  877   EGLLH  881


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  882  DLNTML  899
            DL T+L
Sbjct  903  DLSTLL  908


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6993  VLFDPS  6976
             V F+PS
Sbjct  973   VVFEPS  978


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8334  KILSKPCLIL  8305
             KI  KP  IL
Sbjct  289   KIVRKPSRIL  298


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4740  LFLDEGF  4720
             LFL +GF
Sbjct  298   LFLMDGF  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8829  SLLHP  8843
             SLL+P
Sbjct  449   SLLQP  453


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7483  PDCELQ  7466
             P C LQ
Sbjct  825   PQCNLQ  830


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2496  LGMVN  2482
             LG+VN
Sbjct  832   LGLVN  836


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8160  HQYLR  8146
             H YLR
Sbjct  859   HLYLR  863


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  3231  LSVVIFC  3211
             L V  FC
Sbjct  927   LGVMMFC  933


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1159  LTILFNP  1139
             LT+ F P
Sbjct  971   LTVVFEP  977


>pdb|2D3V|A  Chain A, Crystal Structure Of Leukocyte Ig-Like Receptor A5 (Lilra5LIR9ILT11)
Length=196


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  6646  YRCVQLYYY  6620
             YRC   YYY
Sbjct  73    YRC---YYY  78


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9040  EPSDP  9054
             EPSDP
Sbjct  85    EPSDP  89


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  262  ARFSKPS  242
            ARFS PS
Sbjct  58   ARFSIPS  64


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1571  ALFPRGP  1551
             ALFP GP
Sbjct  156   ALFPVGP  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7356  LWAQP  7370
             LWA+P
Sbjct  8     LWAEP  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 6/27 (22%)
 Frame = +2

Query  2483  FTIPSINNETPGIRYQ---YNVLPQGW  2554
             F IPS      G RY    Y   P GW
Sbjct  60    FSIPSXTEHHAG-RYRCYYYS--PAGW  83


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             S LPSP
Sbjct  104   SALPSP  109


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  139  DPSDP  153
            +PSDP
Sbjct  85   EPSDP  89


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3874  CYY  3866
             CYY
Sbjct  75    CYY  77


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -3

Query  6365  RCYNLSTYS---W  6336
             RCY    YS   W
Sbjct  74    RCYY---YSPAGW  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/18 (33%), Positives = 7/18 (38%), Gaps = 9/18 (50%)
 Frame = +2

Query  8159  WNL---------LQYWSQ  8185
             W L         LQ WS+
Sbjct  169   WXLRCYGSRRHILQVWSE  186


>pdb|2BC4|A  Chain A, Crystal Structure Of Hla-Dm
 pdb|2BC4|C  Chain C, Crystal Structure Of Hla-Dm
Length=211


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 43/66 (65%)
 Frame = -1

Query  6736  FSYCNKCSPWSSLD-----TDSFSCIVVGSCTINFYRCVQLYYYGFSIVREIDRSNYYLF  6572
             FSY         L+      D FSCIV    T                  EIDR  Y   
Sbjct  161   FSY---------LNFTPEPSDIFSCIV----T-----------------HEIDR--Y---  185

Query  6571  FC*TAI  6554
                TAI
Sbjct  186   ---TAI  188


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             I+SC V H
Sbjct  173   IFSCIVTH  180


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 8/18 (44%)
 Frame = -3

Query  4901  LVC*FRVYLCAIS-LFPP  4851
             LVC F      +S LFPP
Sbjct  119   LVC-F------VSNLFPP  129


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = -2

Query  9144  WVP*LAR-ELPGSDL  9103
             WVP   R  LP SDL
Sbjct  191   WVP---RNALP-SDL  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8326  FQALSY  8309
             FQA SY
Sbjct  158   FQAFSY  163


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3045  CIMTHQ  3062
             CI TH+
Sbjct  176   CIVTHE  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  6634  QLYYYGFS  6611
             QL+++ FS
Sbjct  41    QLFFFDFS  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1837  YCDEGS  1820
             YC +GS
Sbjct  23    YCQDGS  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4413  NSLVC  4399
             N LVC
Sbjct  117   NTLVC  121


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2555  SIPVE  2541
             S+PVE
Sbjct  139   SVPVE  143


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6511  TLYCAD  6494
             T YC D
Sbjct  21    TVYCQD  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8718  NYTPGP  8735
             N+TP P
Sbjct  165   NFTPEP  170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7670  EINNYT  7687
             EI+ YT
Sbjct  181   EIDRYT  186


>ref|NP_963917.2|  C-type lectin domain family 12 member A isoform beta [Homo sapiens]
Length=232

 GENE ID: 160364 CLEC12A | C-type lectin domain family 12, member A
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 16/34 (47%)
 Frame = +2

Query  6743  NMRQAHCNISRAKWNN------TLKQIASKL-RE  6823
             NM     NIS    N       TL  IA KL RE
Sbjct  63    NM-----NIS----NKIRNLSTTLQTIATKLCRE  87


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5235  NISMKLM  5255
             NIS+ LM
Sbjct  55    NISLQLM  61


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  952  MRKLQN  969
            M KLQN
Sbjct  42   MNKLQN  47


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7168  DLQTW  7182
             D QTW
Sbjct  117   DVQTW  121


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 15/35 (42%)
 Frame = -2

Query  3840  IALQLL*YFSCSSWALSIPSKNSTFLIPALTNLST  3736
             I LQL+     S   + I  K     I    NLST
Sbjct  56    ISLQLM-----SN--MNISNK-----IR---NLST  75


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6248  NISTSIR  6268
             NIS  IR
Sbjct  65    NISNKIR  71


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +1

Query  3580  SNRLTICIRNHSST  3621
             SN     IRN S T
Sbjct  67    SNK----IRNLSTT  76


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  882  DLNTM  896
            DLN M
Sbjct  188  DLNNM  192


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  537  LQTGSEEL  560
            LQ  SEEL
Sbjct  45   LQNISEEL  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6468  SMEQDH  6485
             S EQ+H
Sbjct  90    SKEQEH  95


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6446  LKCNNK  6463
             LK NNK
Sbjct  136   LKINNK  141


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3117  FIKSH  3131
             FIKS+
Sbjct  146   FIKSQ  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1221  YVDRFY  1238
             Y++R Y
Sbjct  196   YINRLY  201


>ref|NP_612210.4|  C-type lectin domain family 12 member A isoform alpha [Homo sapiens]
Length=265

 GENE ID: 160364 CLEC12A | C-type lectin domain family 12, member A
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 16/34 (47%)
 Frame = +2

Query  6743  NMRQAHCNISRAKWNN------TLKQIASKL-RE  6823
             NM     NIS    N       TL  IA KL RE
Sbjct  96    NM-----NIS----NKIRNLSTTLQTIATKLCRE  120


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -3

Query  3092  PASVFL-LLSLLM  3057
             PA  FL LL LL+
Sbjct  41    PAALFLTLLCLLL  53


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 14/48 (29%), Positives = 15/48 (31%), Gaps = 31/48 (64%)
 Frame = -1

Query  5377  FLALLCRVTPILLCRHPIL-------------------KMDKQQLLQN  5291
             FL LLC     LL     L                   KM+K   LQN
Sbjct  45    FLTLLC-----LL----LLIGLGVLASMFHVTLKIEMKKMNK---LQN  80


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5235  NISMKLM  5255
             NIS+ LM
Sbjct  88    NISLQLM  94


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  6044  FLSHLPILLLVG  6009
             FL  L  LLL+G
Sbjct  45    FLTLLCLLLLIG  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +3

Query  7587  LLCLGMLVG  7613
             LLCL +L+G
Sbjct  48    LLCLLLLIG  56


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1730  RPEALF  1713
             RP ALF
Sbjct  40    RPAALF  45


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 7/17 (41%)
 Frame = -3

Query  3239  LLCFLWLFFALPLLIVL  3189
             LLC L       LLI L
Sbjct  48    LLCLL-------LLIGL  57


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  952  MRKLQN  969
            M KLQN
Sbjct  75   MNKLQN  80


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7168  DLQTW  7182
             D QTW
Sbjct  150   DVQTW  154


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 15/35 (42%)
 Frame = -2

Query  3840  IALQLL*YFSCSSWALSIPSKNSTFLIPALTNLST  3736
             I LQL+     S   + I  K     I    NLST
Sbjct  89    ISLQLM-----SN--MNISNK-----IR---NLST  108


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6248  NISTSIR  6268
             NIS  IR
Sbjct  98    NISNKIR  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +1

Query  3580  SNRLTICIRNHSST  3621
             SN     IRN S T
Sbjct  100   SNK----IRNLSTT  109


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  882  DLNTM  896
            DLN M
Sbjct  221  DLNNM  225


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  537  LQTGSEEL  560
            LQ  SEEL
Sbjct  78   LQNISEEL  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6468  SMEQDH  6485
             S EQ+H
Sbjct  123   SKEQEH  128


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6446  LKCNNK  6463
             LK NNK
Sbjct  169   LKINNK  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3117  FIKSH  3131
             FIKS+
Sbjct  179   FIKSQ  183


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1221  YVDRFY  1238
             Y++R Y
Sbjct  229   YINRLY  234


>sp|Q86TG7.2|PEG10_HUMAN  RecName: Full=Retrotransposon-derived protein PEG10; AltName: 
Full=Paternally expressed gene 10 protein; AltName: Full=Retrotransposon-derived 
gag-like polyprotein; AltName: Full=Embryonal 
carcinoma differentiation-regulated protein; AltName: 
Full=Mammalian retrotransposon-derived protein 2; AltName: 
Full=Myelin expression factor 3-like protein 1; Short=MEF3-like 
protein 1; AltName: Full=Retrotransposon gag domain-containing 
protein 3; AltName: Full=Ty3/Gypsy-like protein
Length=708

 GENE ID: 23089 PEG10 | paternally expressed 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 8/8 (100%), Gaps = 0/8 (0%)
 Frame = -1

Query  5392  DLLAPFLA  5369
             D+LAPF+A
Sbjct  91    DMLAPFMA  98


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  5821  PS-PPPSPQ  5798
             PS PPP PQ
Sbjct  482   PSLPPPAPQ  490


 Score = 19.3 bits (38),  Expect(2) =  1077
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  488  RNIRRL  505
            R IRRL
Sbjct  169  RKIRRL  174


 Score = 18.9 bits (37),  Expect(2) =  1077
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  441  WASRELER  464
            WAS  LER
Sbjct  132  WASAKLER  139


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1158  RMYSP  1172
             RMYSP
Sbjct  475   RMYSP  479


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  5913  QPPLYF  5930
             QPPLY+
Sbjct  490   QPPLYY  495


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4359  LYPPIPPFL  4333
             +Y PIPP L
Sbjct  476   MYSPIPPSL  484


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4557  QEEKQR  4574
             QEEK+R
Sbjct  283   QEEKER  288


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  1596  VLPFHISNSPF  1564
             VL F +  SPF
Sbjct  429   VLSFDVTQSPF  439


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8303  RRIRQGL  8323
             RR RQG+
Sbjct  172   RRLRQGM  178


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  6771  VEQNGITL  6794
             V QNGI L
Sbjct  383   VAQNGIPL  390


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6999  EVTQSP  7016
             +VTQSP
Sbjct  433   DVTQSP  438


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
 Frame = -1

Query  9034  SPVPPRPRLPGKSPA-ESPL  8978
             SP+P  P LP   PA + PL
Sbjct  478   SPIP--PSLP--PPAPQPPL  493


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = +3

Query  1509  CFNCGKEGHTARNCRA  1556
             C  CG  GH A NC A
Sbjct  295   CLYCGTGGHYADNCPA  310


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4605  VMIVW  4619
             VMI W
Sbjct  670   VMITW  674


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  692   PPPPPPP  698


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  693   PPPPPPP  699


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  694   PPPPPPP  700


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  695   PPPPPPP  701


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  696   PPPPPPP  702


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  697   PPPPPPP  703


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             P PPPS
Sbjct  699   PPPPPS  704


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5482  VCFIT  5496
             VCF+T
Sbjct  118   VCFVT  122


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  268  CRARFSKPSPA  236
            C A  SK SPA
Sbjct  308  CPAKASKSSPA  318


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2476  YCIYH  2490
             YC YH
Sbjct  469   YCRYH  473


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  104  HYLKH  90
            HYL H
Sbjct  141  HYLMH  145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +1

Query  7822  IHNDSRRLGR  7851
             IH + RRL R
Sbjct  235   IHIE-RRLAR  243


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  4352  PQSPLFF  4332
             PQ PL++
Sbjct  489   PQPPLYY  495


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  8745  YPLTFGWCYKLVPV  8786
             YP  F W Y   PV
Sbjct  648   YPVGFAW-Y---PV  657


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8977  TRDF  8988
             TRDF
Sbjct  108   TRDF  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -1

Query  7210  SP----IVPHISS  7184
             SP    + PHI S
Sbjct  252   SPPRALVLPHIAS  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  9159  LRLKQW  9142
             LR K W
Sbjct  390   LRIKDW  395


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  74   LRLKQW  57
            LR K W
Sbjct  390  LRIKDW  395


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6741  PIFPIV  6724
             P FP+V
Sbjct  438   PFFPVV  443


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8687  VDPQI  8673
             VDP+I
Sbjct  529   VDPHI  533


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3516  IRRL  3527
             IRRL
Sbjct  171   IRRL  174


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3578  IVTDSQY  3598
             IV DS+Y
Sbjct  463   IVFDSEY  469


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  5728  RLIDRLIE  5751
             RL+D  IE
Sbjct  527   RLVDPHIE  534


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  2154  FGPSIPGF  2131
             F P IPG+
Sbjct  629   FVPQIPGY  636


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3468  TYPAFP  3451
             TY A+P
Sbjct  641   TYAAYP  646


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2589  VMLLWN  2572
             VM  WN
Sbjct  670   VMITWN  675


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3320  TWIPEW  3337
             TW P W
Sbjct  673   TWNPHW  678


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1626  PVSQY  1612
             PV QY
Sbjct  683   PVPQY  687


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8820  ENTSL  8834
             ENT L
Sbjct  40    ENTTL  44


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1059  TLQEQI  1076
             TL EQ+
Sbjct  43    TLREQV  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  459  ERFAVNPGLL  488
            E F  NP +L
Sbjct  84   EKFDGNPDML  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4800  DPNML  4786
             +P+ML
Sbjct  89    NPDML  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1139  QDYPSF  1122
             ++YP F
Sbjct  145   HNYPAF  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2641  LIDNY  2627
             LID Y
Sbjct  202   LIDQY  206


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5001  VLLDIH  4984
             V+L IH
Sbjct  351   VMLQIH  356


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1923  HLPG  1912
             HLPG
Sbjct  356   HLPG  359


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8152  ILVE  8163
             ILVE
Sbjct  397   ILVE  400


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1215  RDYVDR  1232
             RD+V R
Sbjct  559   RDFVAR  564


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3252  VFPHI  3238
             V PHI
Sbjct  258   VLPHI  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1035  FPLVL  1021
             FP VL
Sbjct  440   FPVVL  444


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2830  HYRLYCP  2810
             H R+Y P
Sbjct  473   HCRMYSP  479


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  8056  PVPLQLPP  8079
             P+P  LPP
Sbjct  479   PIPPSLPP  486


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 5/17 (29%)
 Frame = +2

Query  7904  YSPLSF-----QTHLPT  7939
             Y  LS      Q HL T
Sbjct  609   YPRLSIPNLEDQAHLAT  625


>sp|Q2KHT3.2|CL16A_HUMAN  RecName: Full=Protein CLEC16A
Length=1053

 GENE ID: 23274 CLEC16A | C-type lectin domain family 16, member A
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4281  LNILRQ  4298
             LNILRQ
Sbjct  82    LNILRQ  87


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4438  KFSGLLQGQQ  4467
             KF GLLQ  Q
Sbjct  750   KFAGLLQDMQ  759


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +2

Query  3197  LTEAVQKITTESIVIWG  3247
             L E +  IT E I IWG
Sbjct  47    LVETIRSIT-E-ILIWG  61


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +2

Query  8906  PSISSRGPRAASG  8944
             PS SS  P  ASG
Sbjct  894   PSLSSQSPPSASG  906


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/7 (100%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  905  SGGTSSS  925
            SGGTSSS
Sbjct  919  SGGTSSS  925


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  7024  QNKTNYKHVAE  7056
             Q   NYK V E
Sbjct  388   QKRPNYKNVGE  398


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
 Frame = +1

Query  3355  SLSEIMVPVRERTHSRSRNLLC  3420
             SLS  +VP R+ T S    LLC
Sbjct  978   SLSPSLVPARQPTIS----LLC  995


 Score = 17.6 bits (34),  Expect(2) =  4240
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2931  YVNSLE  2948
             YV SLE
Sbjct  292   YVYSLE  297


 Score = 17.6 bits (34),  Expect(2) =  4240
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2934  VNSLEE  2951
             VNSL E
Sbjct  330   VNSLAE  335


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2928  NYVNS  2942
             NYVNS
Sbjct  121   NYVNS  125


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  7268  KAKRRVVQREKR  7303
             K KRRV   +KR
Sbjct  382   KGKRRV---QKR  390


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/26 (34%), Positives = 10/26 (38%), Gaps = 12/26 (46%)
 Frame = +1

Query  8527  RRRRWV----------FQS--HLRYL  8568
             R R WV           +S  HL YL
Sbjct  4     RSRSWVGGGHGKTSRNIHSLDHLKYL  29


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QRSV
Sbjct  867   TVQRSV  872


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1031  PWFSHLAW  1008
             P FS L W
Sbjct  218   PYFSNLVW  225


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +2

Query  5    SLVRPDLS-LGALW  43
            SLV PD S LG  W
Sbjct  735  SLVEPDVSRLG--W  746


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = +3

Query  9090  SLVRPDLS-LGALW  9128
             SLV PD S LG  W
Sbjct  735   SLVEPDVSRLG--W  746


 Score = 16.3 bits (31),  Expect(2) = 13168
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6600  KLTDLI  6583
             KL DL+
Sbjct  249   KLSDLV  254


 Score = 16.3 bits (31),  Expect(2) = 13168
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6461  YYYILESQN  6435
             Y Y LE Q+
Sbjct  292   YVYSLENQD  300


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  526  YNHP  537
            YNHP
Sbjct  535  YNHP  538


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  460  NDSQLILAC  486
            N+S LI AC
Sbjct  706  NNSDLI-AC  713


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6646  YRCVQL  6629
             Y CVQL
Sbjct  92    YVCVQL  97


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = -1

Query  1174  VGLYILT--ILFNPRIIH  1127
             V LY L    L    IIH
Sbjct  312   VSLYLLSQVFL----IIH  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5540  DEELIRT  5560
             +E+LI T
Sbjct  693   EEDLIKT  699


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  8002  IHSISERIL  8028
             I SI E IL
Sbjct  51    IRSITE-IL  58


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8275  SLYY  8264
             SLYY
Sbjct  113   SLYY  116


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2059  SSNYVD  2042
             S NYV+
Sbjct  119   SNNYVN  124


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = -2

Query  8292  RIALQAPCTTSITLSV  8245
             RIA        ITL V
Sbjct  187   RIAVR-----TITLNV  197


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7423  LLHYTR  7406
             +LHY R
Sbjct  207   MLHYIR  212


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7505  RILAVERY  7528
             R LAV+ Y
Sbjct  725   RFLAVDIY  732


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8345  GWQVVK  8362
             GW VVK
Sbjct  745   GWGVVK  750


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8896  NLHSNTSLS  8870
             N HS  SLS
Sbjct  889   NQHSSPSLS  897


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4884  PELADQLI  4907
             P L DQL+
Sbjct  946   PHLPDQLV  953


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4654  LFHVL  4640
             L+HVL
Sbjct  29    LYHVL  33


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 7/16 (43%)
 Frame = -2

Query  2421  STVTDFF-------FF  2395
             S V DFF       FF
Sbjct  66    SSVFDFFLEKNMFVFF  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -3

Query  227  APLV-SLS---LSG  198
            APLV SL    L G
Sbjct  327  APLVNSLAEVILNG  340


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6551  LNGSLAE  6571
             LNG L E
Sbjct  338   LNGDLSE  344


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  3190  KT---INRGSAK  3216
             KT   I R SAK
Sbjct  348   KTEQDIQRSSAK  359


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7415  VQQQN  7429
             VQ+QN
Sbjct  455   VQEQN  459


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +1

Query  7030  KTNYKH-VAE  7056
             KT Y H  AE
Sbjct  532   KTTYNHPLAE  541


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  8375  NHTTF*PLATHLI  8337
             NH    PLA  LI
Sbjct  536   NH----PLAERLI  544


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -1

Query  577  VLYNDLSSSD  548
            VL  DL  SD
Sbjct  702  VL--DLNNSD  709


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3289  GNMVDRVLA  3315
             G MV R LA
Sbjct  720   GGMVQRFLA  728


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4838  SLTQMP  4821
             SLT MP
Sbjct  1020  SLTGMP  1025


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5704  ILRQ  5715
             ILRQ
Sbjct  84    ILRQ  87


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8554  HLRYL  8568
             HL YL
Sbjct  260   HLHYL  264


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 9/10 (90%), Gaps = 1/10 (10%)
 Frame = +2

Query  5528  SGDSDE-ELI  5554
             SG+S+E E++
Sbjct  430   SGESEEIEMV  439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7812  YHSQFVM  7792
             YH  FV+
Sbjct  496   YHALFVL  502


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 11/29 (37%)
 Frame = -3

Query  7817  LYTTANLLC*TNSTNLPIYLIPIILVHSF  7731
             LY    LL    S N   Y   II VH F
Sbjct  114   LY---YLL----SNN---YVNSII-VHKF  131


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  725  LADLIA  708
            L DL+A
Sbjct  250  LSDLVA  255


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4672  IWCFTK  4655
             I CF K
Sbjct  362   IRCFIK  367


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8518  KHKRRRR  8538
             KHK  RR
Sbjct  380   KHKGKRR  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3662  EQLIKKEKV  3688
             E LIK + V
Sbjct  694   EDLIKTDDV  702


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3598  CIRNHSS  3618
             CI  HSS
Sbjct  887   CINQHSS  893


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  9034  SPVPPRPRLP  9005
             SP  P P LP
Sbjct  940   SPELPKPHLP  949


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  229   LSTQDSAC  252
             LST   AC
Sbjct  1027  LSTPAAAC  1034


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2525  YQYNVL  2542
             Y Y VL
Sbjct  28    YLYHVL  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1159  LTILF  1145
             L ILF
Sbjct  101   LNILF  105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5990  CVPTD  6004
             CV TD
Sbjct  237   CVQTD  241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5725  DRLIDRL  5745
             D L +RL
Sbjct  281   DHLLNRL  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8637  LPVPPFLL  8614
             LPV  +LL
Sbjct  310   LPVSLYLL  317


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7798  CYVKP  7784
             C++KP
Sbjct  364   CFIKP  368


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8259  ITLSVPSA  8236
             I L VP A
Sbjct  522   IQLPVPNA  529


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4839  LPDPNA  4822
             LP PNA
Sbjct  524   LPVPNA  529


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6255  LILKEQ  6238
             L LK+Q
Sbjct  567   LLLKQQ  572


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3306  SVHHVSH  3286
             SVH V H
Sbjct  596   SVHLVRH  602


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3905  QLKGE  3919
             QL GE
Sbjct  679   QLRGE  683


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8975  LQGTF  8989
             LQ TF
Sbjct  789   LQATF  793


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  1439  AHCFSQNS  1416
             A+C  Q S
Sbjct  885   AQCINQHS  892


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  292  HQSPPLAS  269
            H SP L S
Sbjct  891  HSSPSLSS  898


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4182  LIPAHQ  4165
             L+PA Q
Sbjct  983   LVPARQ  988


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9038  PLPSPAQA  9015
             PL  PA A
Sbjct  1026  PLSTPAAA  1033


>ref|NP_899632.1|  NACHT, LRR and PYD domains-containing protein 3 isoform b [Homo 
sapiens]
Length=922

 GENE ID: 114548 NLRP3 | NLR family, pyrin domain containing 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 16/31 (51%)
 Frame = +3

Query  1092  NPPIPVGEIYKRWIILGLNKIVRMYSPTSIL  1184
             NPPI               KIVR   P  IL
Sbjct  284   NPPI--------------HKIVRK--PSRIL  298


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3000  NWQKTER  3020
             +WQK ER
Sbjct  321   DWQKAER  327


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +3

Query  4569  QRSLG--IM  4589
             QRSLG  IM
Sbjct  269   QRSLGDLIM  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5299  TTAVYPF  5319
             TTAVY F
Sbjct  439   TTAVYVF  445


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6143  LCVSLK---CTDLK  6175
             LCV LK   C +LK
Sbjct  761   LCVGLKHLLC-NLK  773


 Score = 18.5 bits (36),  Expect(2) =  3632
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7123  AAINKR  7140
             AAIN R
Sbjct  76    AAINRR  81


 Score = 17.2 bits (33),  Expect(2) =  3632
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7062  EKQCMPLP  7085
             +K C PLP
Sbjct  35    QKGCIPLP  42


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 11/21 (52%)
 Frame = +1

Query  2167  AIDRRKNKSISRNLY----RD  2217
             AI+R       R+LY    RD
Sbjct  77    AINR-------RDLYEKAKRD  90


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  7113  FDEHLICPL  7087
             FDEH I PL
Sbjct  311   FDEH-IGPL  318


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8093  LLIVTRIVEL  8122
             LLI TR V L
Sbjct  346   LLITTRPVAL  355


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4914  YYFDCFSDSA  4943
             Y+F  FSD A
Sbjct  381   YFFKYFSDEA  390


 Score = 16.8 bits (32),  Expect(2) =  9615
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 1/8 (12%)
 Frame = -2

Query  3195  CFTSLV-W  3175
             CF  LV W
Sbjct  409   CFIPLVCW  416


 Score = 16.8 bits (32),  Expect(2) =  9615
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF L SLL
Sbjct  444   VFFLSSLL  451


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1908  VCQED  1922
             +CQED
Sbjct  107   ICQED  111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9139  SLVSQR  9122
             SLV QR
Sbjct  265   SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  54   SLVSQR  37
            SLV QR
Sbjct  265  SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 7/22 (31%), Gaps = 13/22 (59%)
 Frame = -2

Query  5289  LIMASTPAQVSP*VS*ICCPKP  5224
             LIM              CCP P
Sbjct  275   LIMS-------------CCPDP  283


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  7520  ERYLKDQQLLGI  7555
             ER   +Q+LL I
Sbjct  182   ER---EQELLAI  190


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  6066  SFFHMLKFSVTF  6031
             SF HM     TF
Sbjct  519   SFIHM-----TF  525


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  8670  GYLVF-----FG  8650
             GYL+F     FG
Sbjct  571   GYLIFVVRFLFG  582


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = -2

Query  1029  LVLSSG--LVQ*ALHALD  982
             LVLSS   LV+     LD
Sbjct  735   LVLSSNQKLVE-----LD  747


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  9065  SCFLPVLGLS  9094
             SC L  LGLS
Sbjct  883   SCLLQNLGLS  892


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5990  CVPTDPNP  6013
             C P DPNP
Sbjct  279   CCP-DPNP  285


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2350  LSSLI  2336
             LSSLI
Sbjct  332   LSSLI  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6911  EFFYC  6925
             E FYC
Sbjct  629   ELFYC  633


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  952  LMVSFN  935
            LM+ FN
Sbjct  57   LMIDFN  62


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  698  HRTQQ  712
            HR QQ
Sbjct  177  HRSQQ  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1003  IGPACT  986
             IGP CT
Sbjct  315   IGPLCT  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2644  VLIDNY  2627
             VL +NY
Sbjct  560   VLLENY  565


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  6674  CCW  6666
             CCW
Sbjct  843   CCW  845


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2915  SLGKSDL  2895
             SLG  DL
Sbjct  861   SLGNNDL  867


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 11/18 (61%)
 Frame = -1

Query  784  LGD---MA*CTICPWMFC  740
            LGD   M        MFC
Sbjct  867  LGDLGVM--------MFC  876


 Score = 15.5 bits (29),  Expect(2) = 32925
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7587  LLCLGML  7607
             LLC G+L
Sbjct  817   LLCEGLL  823


 Score = 15.1 bits (28),  Expect(2) = 32925
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7690  LNTLL  7704
             L TLL
Sbjct  847   LSTLL  851


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1730  WGRDN  1744
             WG DN
Sbjct  94    WGSDN  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2096  PISPI  2110
             P+SPI
Sbjct  199   PVSPI  203


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6990  LFDP  6979
             LFDP
Sbjct  208   LFDP  211


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7442  AIEAQQHLL  7468
             A E  QHLL
Sbjct  354   ALEKLQHLL  362


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6415  YGNWLKGYL  6389
             YG   KGYL
Sbjct  565   YGKFEKGYL  573


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6239  CSFNIS  6256
             C F+IS
Sbjct  729   CCFDIS  734


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3847  TSHC  3836
             TSHC
Sbjct  840   TSHC  843


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5834  LGMLMIC  5854
             LG +M C
Sbjct  870   LGVMMFC  876


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1162  CIALP  1176
             CI LP
Sbjct  38    CIPLP  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6125  MALGFDP  6105
             M L FDP
Sbjct  205   MELLFDP  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = -1

Query  2809  FIRM---EF  2792
             FI M   EF
Sbjct  520   FIHMTFQEF  528


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3471  LIEEDK  3488
             L EE+K
Sbjct  535   LLEEEK  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  194  RDLKAKGKPEE  226
            RDL  K K +E
Sbjct  81   RDLYEKAKRDE  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2071  SQQI  2060
             SQQI
Sbjct  601   SQQI  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  766  IRPYHLEL  789
            I P +LEL
Sbjct  623  IQPSQLEL  630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8962  DIELATR  8982
             +I L TR
Sbjct  654   EINLSTR  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6229  LSFLH  6215
             L FLH
Sbjct  681   LGFLH  685


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  994   QGLLH  1008
             +GLLH
Sbjct  820   EGLLH  824


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  882  DLNTML  899
            DL T+L
Sbjct  846  DLSTLL  851


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6993  VLFDPS  6976
             V F+PS
Sbjct  916   VVFEPS  921


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8334  KILSKPCLIL  8305
             KI  KP  IL
Sbjct  289   KIVRKPSRIL  298


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4740  LFLDEGF  4720
             LFL +GF
Sbjct  298   LFLMDGF  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8829  SLLHP  8843
             SLL+P
Sbjct  449   SLLQP  453


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8160  HQYLR  8146
             H YLR
Sbjct  802   HLYLR  806


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  3231  LSVVIFC  3211
             L V  FC
Sbjct  870   LGVMMFC  876


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1159  LTILFNP  1139
             LT+ F P
Sbjct  914   LTVVFEP  920


>ref|NP_004886.3|  NACHT, LRR and PYD domains-containing protein 3 isoform a [Homo 
sapiens]
 ref|NP_001073289.1|  NACHT, LRR and PYD domains-containing protein 3 isoform a [Homo 
sapiens]
Length=1036

 GENE ID: 114548 NLRP3 | NLR family, pyrin domain containing 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/31 (35%), Positives = 11/31 (35%), Gaps = 16/31 (51%)
 Frame = +3

Query  1092  NPPIPVGEIYKRWIILGLNKIVRMYSPTSIL  1184
             NPPI               KIVR   P  IL
Sbjct  284   NPPI--------------HKIVRK--PSRIL  298


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3000  NWQKTER  3020
             +WQK ER
Sbjct  321   DWQKAER  327


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +3

Query  4569  QRSLG--IM  4589
             QRSLG  IM
Sbjct  269   QRSLGDLIM  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5299  TTAVYPF  5319
             TTAVY F
Sbjct  439   TTAVYVF  445


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6143  LCVSLK---CTDLK  6175
             LCV LK   C +LK
Sbjct  818   LCVGLKHLLC-NLK  830


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  2718  CCLSSSIFVLCC  2683
             CCL S     CC
Sbjct  837   CCLTSA----CC  844


 Score = 18.5 bits (36),  Expect(2) =  3506
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7123  AAINKR  7140
             AAIN R
Sbjct  76    AAINRR  81


 Score = 17.2 bits (33),  Expect(2) =  3506
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7062  EKQCMPLP  7085
             +K C PLP
Sbjct  35    QKGCIPLP  42


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 11/21 (52%)
 Frame = +1

Query  2167  AIDRRKNKSISRNLY----RD  2217
             AI+R       R+LY    RD
Sbjct  77    AINR-------RDLYEKAKRD  90


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  7113  FDEHLICPL  7087
             FDEH I PL
Sbjct  311   FDEH-IGPL  318


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  8093  LLIVTRIVEL  8122
             LLI TR V L
Sbjct  346   LLITTRPVAL  355


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4914  YYFDCFSDSA  4943
             Y+F  FSD A
Sbjct  381   YFFKYFSDEA  390


 Score = 16.8 bits (32),  Expect(2) =  9210
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 1/8 (12%)
 Frame = -2

Query  3195  CFTSLV-W  3175
             CF  LV W
Sbjct  409   CFIPLVCW  416


 Score = 16.8 bits (32),  Expect(2) =  9210
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3083  VFLLLSLL  3060
             VF L SLL
Sbjct  444   VFFLSSLL  451


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1908  VCQED  1922
             +CQED
Sbjct  107   ICQED  111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  9139  SLVSQR  9122
             SLV QR
Sbjct  265   SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  54   SLVSQR  37
            SLV QR
Sbjct  265  SLVTQR  270


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/22 (31%), Positives = 7/22 (31%), Gaps = 13/22 (59%)
 Frame = -2

Query  5289  LIMASTPAQVSP*VS*ICCPKP  5224
             LIM              CCP P
Sbjct  275   LIMS-------------CCPDP  283


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +2

Query  7520  ERYLKDQQLLGI  7555
             ER   +Q+LL I
Sbjct  182   ER---EQELLAI  190


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  6066  SFFHMLKFSVTF  6031
             SF HM     TF
Sbjct  519   SFIHM-----TF  525


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 5/12 (41%)
 Frame = -2

Query  8670  GYLVF-----FG  8650
             GYL+F     FG
Sbjct  571   GYLIFVVRFLFG  582


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 7/18 (38%)
 Frame = -2

Query  1029  LVLSSG--LVQ*ALHALD  982
             LVLSS   LV+     LD
Sbjct  792   LVLSSNQKLVE-----LD  804


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2238  QKLGL  2252
             QKLGL
Sbjct  887   QKLGL  891


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  9065  SCFLPVLGLS  9094
             SC L  LGLS
Sbjct  997   SCLLQNLGLS  1006


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  5990  CVPTDPNP  6013
             C P DPNP
Sbjct  279   CCP-DPNP  285


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2350  LSSLI  2336
             LSSLI
Sbjct  332   LSSLI  336


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6911  EFFYC  6925
             E FYC
Sbjct  629   ELFYC  633


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  952  LMVSFN  935
            LM+ FN
Sbjct  57   LMIDFN  62


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  698  HRTQQ  712
            HR QQ
Sbjct  177  HRSQQ  181


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1003  IGPACT  986
             IGP CT
Sbjct  315   IGPLCT  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2644  VLIDNY  2627
             VL +NY
Sbjct  560   VLLENY  565


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3351  VLTNSHS  3331
             VL  SHS
Sbjct  850   VLSTSHS  856


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  6674  CCW  6666
             CCW
Sbjct  957   CCW  959


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2915  SLGKSDL  2895
             SLG  DL
Sbjct  975   SLGNNDL  981


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 11/18 (61%)
 Frame = -1

Query  784  LGD---MA*CTICPWMFC  740
            LGD   M        MFC
Sbjct  981  LGDLGVM--------MFC  990


 Score = 15.5 bits (29),  Expect(2) = 31177
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7587  LLCLGML  7607
             LLC G+L
Sbjct  931   LLCEGLL  937


 Score = 15.1 bits (28),  Expect(2) = 31177
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7690  LNTLL  7704
             L TLL
Sbjct  961   LSTLL  965


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1730  WGRDN  1744
             WG DN
Sbjct  94    WGSDN  98


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2096  PISPI  2110
             P+SPI
Sbjct  199   PVSPI  203


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6990  LFDP  6979
             LFDP
Sbjct  208   LFDP  211


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7442  AIEAQQHLL  7468
             A E  QHLL
Sbjct  354   ALEKLQHLL  362


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  6415  YGNWLKGYL  6389
             YG   KGYL
Sbjct  565   YGKFEKGYL  573


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6239  CSFNIS  6256
             C F+IS
Sbjct  786   CCFDIS  791


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  879  QDLNTMLNT  905
            QDL   L T
Sbjct  845  QDLASVLST  853


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3847  TSHC  3836
             TSHC
Sbjct  954   TSHC  957


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5834  LGMLMIC  5854
             LG +M C
Sbjct  984   LGVMMFC  990


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1162  CIALP  1176
             CI LP
Sbjct  38    CIPLP  42


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6125  MALGFDP  6105
             M L FDP
Sbjct  205   MELLFDP  211


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = -1

Query  2809  FIRM---EF  2792
             FI M   EF
Sbjct  520   FIHMTFQEF  528


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3471  LIEEDK  3488
             L EE+K
Sbjct  535   LLEEEK  540


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  194  RDLKAKGKPEE  226
            RDL  K K +E
Sbjct  81   RDLYEKAKRDE  91


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2071  SQQI  2060
             SQQI
Sbjct  601   SQQI  604


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  766  IRPYHLEL  789
            I P +LEL
Sbjct  623  IQPSQLEL  630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8962  DIELATR  8982
             +I L TR
Sbjct  654   EINLSTR  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6229  LSFLH  6215
             L FLH
Sbjct  681   LGFLH  685


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3317  LANTLST  3297
             LA  LST
Sbjct  847   LASVLST  853


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  994   QGLLH  1008
             +GLLH
Sbjct  934   EGLLH  938


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  882  DLNTML  899
            DL T+L
Sbjct  960  DLSTLL  965


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6993  VLFDPS  6976
             V F+PS
Sbjct  1030  VVFEPS  1035


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  8334  KILSKPCLIL  8305
             KI  KP  IL
Sbjct  289   KIVRKPSRIL  298


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4740  LFLDEGF  4720
             LFL +GF
Sbjct  298   LFLMDGF  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8829  SLLHP  8843
             SLL+P
Sbjct  449   SLLQP  453


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7483  PDCELQ  7466
             P C LQ
Sbjct  882   PQCNLQ  887


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2496  LGMVN  2482
             LG+VN
Sbjct  889   LGLVN  893


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8160  HQYLR  8146
             H YLR
Sbjct  916   HLYLR  920


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  3231  LSVVIFC  3211
             L V  FC
Sbjct  984   LGVMMFC  990


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1159  LTILFNP  1139
             LT+ F P
Sbjct  1028  LTVVFEP  1034


>ref|NP_005453.2|  melanoma-associated antigen C1 [Homo sapiens]
Length=1142

 GENE ID: 9947 MAGEC1 | melanoma antigen family C, 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  4201  LQSPKSRS  4224
             LQSP SRS
Sbjct  51    LQSPQSRS  58


 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = -1

Query  4642  LILILSTCHTII  4607
             LILILS    II
Sbjct  1000  LILILS----II  1007


 Score = 22.3 bits (45),  Expect =   731
 Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 18/41 (43%)
 Frame = -3

Query  9128  PESSQAQIWSNQRDPVQAKSSCLYAGSEGSPLPSPAQATPP  9006
             PESSQ    S    PVQ            SPL SP Q  PP
Sbjct  645   PESSQ----SPPEGPVQ------------SPLHSP-Q-SPP  667


 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 9/24 (37%)
 Frame = -1

Query  1195  CL-----MS--RMLVGLYILTILF  1145
             CL     MS  R+L+ L IL I F
Sbjct  987   CLSDEQGMSQNRLLI-L-ILSIIF  1008


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -2

Query  2061  FLPIMLTGVGPTNTVPI  2011
             FL  ML      NTVPI
Sbjct  1087  FLA-MLK-----NTVPI  1097


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  4367  PLHCTPQSPL  4338
             PL+  PQSPL
Sbjct  691   PLQ-IPQSPL  699


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -2

Query  3156  YFPV-FR  3139
             YFPV FR
Sbjct  945   YFPVIFR  951


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = -3

Query  1952  LQFPLSF-----LVSIF  1917
             LQ P S      LVSIF
Sbjct  163   LQIPVSAASSSTLVSIF  179


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  1517  LWQRRAHSQ  1543
             LW  RAHS+
Sbjct  1070  LWGPRAHSE  1078


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -2

Query  984  DALYPILQLPH  952
            D LYP LQ P+
Sbjct  46   DTLYP-LQSPQ  55


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3385  ERTHS  3399
             ERTHS
Sbjct  324   ERTHS  328


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3385  ERTHS  3399
             ERTHS
Sbjct  394   ERTHS  398


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3385  ERTHS  3399
             ERTHS
Sbjct  464   ERTHS  468


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 19/38 (50%)
 Frame = -2

Query  9033  PQSRP--G---HASLESPQRKVPCSKLDVS--SS*STP  8941
             PQS P  G   + SL+SP          VS  SS STP
Sbjct  612   PQS-PLQGEEFQSSLQSP----------VSICSS-STP  637


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
 Frame = -2

Query  4635  SSCLLATQSSPAICFP  4588
             SS L   QSSP   FP
Sbjct  822   SSSL--SQSSPVSSFP  835


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1794  LKDTVP  1777
             LK+TVP
Sbjct  1091  LKNTVP  1096


 Score = 18.5 bits (36),  Expect(2) =  7353
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8995  PAESPL  8978
             PA+SPL
Sbjct  770   PAQSPL  775


 Score = 15.5 bits (29),  Expect(2) =  7353
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             + SL+SP
Sbjct  737   QSSLQSP  743


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2570  IFQSS  2584
             IFQSS
Sbjct  143   IFQSS  147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2570  IFQSS  2584
             IFQSS
Sbjct  178   IFQSS  182


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2570  IFQSS  2584
             IFQSS
Sbjct  213   IFQSS  217


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2570  IFQSS  2584
             IFQSS
Sbjct  353   IFQSS  357


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  6404  AQRIPLDRPV  6375
             AQ  PL RPV
Sbjct  771   AQS-PLQRPV  779


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  3651  LTNSDSL  3631
             LT+S+SL
Sbjct  891   LTDSESL  897


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 8/23 (34%)
 Frame = -2

Query  9042  LATPQSRPGHAS------LESPQ  8992
             L  PQS P   S      L+SPQ
Sbjct  35    LQIPQSSP--ESDDTLYPLQSPQ  55


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  4941  QS-LKNSQS  4918
             QS L NSQS
Sbjct  93    QSPLQNSQS  101


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 12/25 (48%)
 Frame = -3

Query  7574  VFQSNP---KSP--GAVDPLGIFPQ  7515
             +FQS P    SP  G       FPQ
Sbjct  143   IFQSSPESTQSPFEG-------FPQ  160


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 12/25 (48%)
 Frame = -3

Query  7574  VFQSNP---KSP--GAVDPLGIFPQ  7515
             +FQS P    SP  G       FPQ
Sbjct  178   IFQSSPESTQSPFEG-------FPQ  195


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3253  SLSPYYY  3233
             SLSP Y+
Sbjct  542   SLSPHYF  548


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3253  SLSPYYY  3233
             SLSP Y+
Sbjct  558   SLSPHYF  564


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3253  SLSPYYY  3233
             SLSP Y+
Sbjct  574   SLSPHYF  580


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3253  SLSPYYY  3233
             SLSP Y+
Sbjct  589   SLSPHYF  595


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  43   PESSQ  29
            PESSQ
Sbjct  645  PESSQ  649


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  8995  PAESPL  8978
             PA+SPL
Sbjct  805   PAQSPL  810


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  5937  QMLKHMIQRY  5966
             +ML   I RY
Sbjct  933   EMLTNVISRY  942


 Score = 16.8 bits (32),  Expect(2) = 10646
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7444  SPQQIV  7427
             SP QIV
Sbjct  528   SPLQIV  533


 Score = 16.3 bits (31),  Expect(2) = 10646
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7571  FQSNP  7557
             FQS P
Sbjct  495   FQSSP  499


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +3

Query  1683  QSRPEPTAPPEESF  1724
             QS PE T  P E F
Sbjct  145   QSSPESTQSPFEGF  158


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +3

Query  1683  QSRPEPTAPPEESF  1724
             QS PE T  P E F
Sbjct  180   QSSPESTQSPFEGF  193


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7574  VFQSNPKS  7551
             +FQS P S
Sbjct  353   IFQSSPES  360


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4198  SLQSP  4212
             SLQSP
Sbjct  624   SLQSP  628


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4198  SLQSP  4212
             SLQSP
Sbjct  739   SLQSP  743


 Score = 16.3 bits (31),  Expect(2) = 15184
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7571  FQSNP  7557
             FQS P
Sbjct  284   FQSSP  288


 Score = 15.9 bits (30),  Expect(2) = 15184
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7633  LFQRF  7619
             LFQ F
Sbjct  248   LFQSF  252


 Score = 16.8 bits (32),  Expect(2) = 18198
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  134  LEIPQ  148
            L+IPQ
Sbjct  35   LQIPQ  39


 Score = 15.1 bits (28),  Expect(2) = 18198
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  139  DPSDP  153
            D SDP
Sbjct  62   DSSDP  66


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1680  LQSRPE  1697
             LQS PE
Sbjct  424   LQSSPE  429


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5919  PLYF  5930
             PLYF
Sbjct  608   PLYF  611


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +2

Query  3917  EAMHGQVDCSP  3949
             E MH Q   SP
Sbjct  668   EGMHSQ---SP  675


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5955  SYALAS  5938
             SY LAS
Sbjct  784   SYTLAS  789


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -3

Query  9047  EG---SPLPSP  9024
             EG   SPL SP
Sbjct  803   EGPAQSPLQSP  813


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  1055  SSSCYVTSPWFS  1020
             SSS  V SP FS
Sbjct  1131  SSS--VMSPSFS  1140


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9042  LATPQSR  9022
             L  PQSR
Sbjct  51    LQSPQSR  57


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  9047  EG----SPLPSPA  9021
             EG    SPL  PA
Sbjct  120   EGEDVQSPLQNPA  132


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7574  VFQSNP  7557
             +FQS P
Sbjct  213   IFQSSP  218


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5790  YFSFTL  5773
             +FS+TL
Sbjct  782   FFSYTL  787


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +2

Query  2237  SKIGPENPYNTPV  2275
             SK  PE P   PV
Sbjct  843   SKSSPESPLQSPV  855


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  9074  KSSCLYAGSEGSPLPSP  9024
             KSS      E SPL SP
Sbjct  844   KSS-----PE-SPLQSP  854


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = -1

Query  6616  FSI-VREIDRSNYYLF  6572
             F I  RE+D  + Y F
Sbjct  961   FGISLREVDPDDSYVF  976


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8669  DILSSLGV  8646
             D+LS  GV
Sbjct  1021  DVLSGIGV  1028


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  967   SAASSLM  947
             SA SS M
Sbjct  1129  SASSSVM  1135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  134  LEIPQ  148
            L+IPQ
Sbjct  80   LQIPQ  84


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +3

Query  1167  SPTSILDIRQGPKE  1208
             SP   L+I Q P E
Sbjct  110   SP---LEISQSPPE  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8121  SSTILVTI  8098
             SS  LV I
Sbjct  171   SSSTLVSI  178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  8296  VANSSTSSL  8270
             V  SS S L
Sbjct  307   VSSSSSSTL  315


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  134  LEIPQ  148
            L+IPQ
Sbjct  514  LQIPQ  518


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  134  LEIPQ  148
            L+IPQ
Sbjct  692  LQIPQ  696


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8887  SNTSLS  8870
             S TSLS
Sbjct  749   SSTSLS  754


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8887  SNTSLS  8870
             S TSLS
Sbjct  860   SSTSLS  865


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/15 (40%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = -2

Query  543  SEGMVVAVPVFVYSL  499
            SE ++   P F Y L
Sbjct  894  SESLIESEPLFTYTL  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  933   MLKETI  950
             MLK T+
Sbjct  1090  MLKNTV  1095


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3965  LVAIF  3951
             LV IF
Sbjct  175   LVSIF  179


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = +1

Query  3352  PSLSEIMV------PVRERTHS  3399
             PS S  +V      P  ERT+S
Sbjct  274   PSFSSTLVSLFQSSP--ERTQS  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7571  FQSNP  7557
             FQS P
Sbjct  319   FQSSP  323


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7571  FQSNP  7557
             FQS P
Sbjct  389   FQSSP  393


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5787  FSFTL  5773
             FS+TL
Sbjct  451   FSYTL  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7571  FQSNP  7557
             FQS P
Sbjct  459   FQSSP  463


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8296  VANSSTSS  8273
             V  SS SS
Sbjct  482   VSSSSSSS  489


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  187  PEQGPESE  210
            PE  PE E
Sbjct  679  PESAPEGE  686


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  1955  FIKVRQYDQILIEI  1996
             F K R++    IEI
Sbjct  950   FRKAREF----IEI  959


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2309  RKLVDF  2326
             RK V+F
Sbjct  1082  RKVVEF  1087


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4479  GKDQQS  4496
             GKD QS
Sbjct  73    GKDSQS  78


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5314  DKQQLLQNS  5288
             D Q  LQNS
Sbjct  91    DTQSPLQNS  99


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3385  ERTHS  3399
             ERT+S
Sbjct  219   ERTQS  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3385  ERTHS  3399
             ERT+S
Sbjct  254   ERTQS  258


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  143  PQTLL  157
            PQ LL
Sbjct  334  PQSLL  338


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 12/27 (44%)
 Frame = -2

Query  3987  FPSKCVQSSCHIPGLQSTCPCMASPFS  3907
             FP    QS  +IP        M S FS
Sbjct  403   FP----QSPLQIP--------MTSSFS  417


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2573  FQSSM  2587
             FQSS+
Sbjct  621   FQSSL  625


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 0/18 (0%)
 Frame = -1

Query  8899  SNLHSNTSLSGSSIPCRL  8846
             S L+S  S   SS P  L
Sbjct  623   SSLQSPVSICSSSTPSSL  640


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  193  QGPESERE  216
            Q PES  E
Sbjct  677  QSPESAPE  684


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  4371  LSPALYPPIPP  4339
             LSP  +P  PP
Sbjct  721   LSPLHFPQFPP  731


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6987  ITLKEV  7004
             I L EV
Sbjct  963   ISLREV  968


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7274  KRRVVQ  7291
             KR VV+
Sbjct  1081  KRKVVE  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4516  PFTFP  4502
             P TFP
Sbjct  1096  PITFP  1100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3924  MASPFS  3907
             M S FS
Sbjct  342   MTSSFS  347


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6523  NSMCTLY  6503
             +SM  LY
Sbjct  604   DSMSPLY  610


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8674  ICGSTT  8691
             IC S T
Sbjct  631   ICSSST  636


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8674  ICGSTT  8691
             IC S T
Sbjct  746   ICSSST  751


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8544  FPVTPQVP  8567
             FP  PQ P
Sbjct  759   FPESPQSP  766


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3988  SYPGSSSCS  4014
             S+P S S S
Sbjct  816   SFPSSTSSS  824


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3988  SYPGSSSCS  4014
             S+P S S S
Sbjct  833   SFPSSTSSS  841


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  3363  TKGGVLTN  3340
             TK   LTN
Sbjct  930   TKAEMLTN  937


>ref|NP_064509.2|  interferon kappa precursor [Homo sapiens]
Length=207

 GENE ID: 56832 IFNK | interferon, kappa [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8272  LYYFY  8258
             LYYFY
Sbjct  194   LYYFY  198


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8089  LTLDCN  8106
             L LDCN
Sbjct  26    LSLDCN  31


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5203  MSNSF  5189
             MSNSF
Sbjct  51    MSNSF  55


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  812  YYFY  801
            YYFY
Sbjct  195  YYFY  198


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8610  FLKEK  8624
             FLKEK
Sbjct  172   FLKEK  176


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5171  LEELKNE  5191
             LEE KNE
Sbjct  129   LEEDKNE  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1574  TALFPR  1557
             TALF R
Sbjct  201   TALFRR  206


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1637  REDLAF  1654
             RE+ AF
Sbjct  61    RENIAF  66


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8962  QQFLKY  8945
             Q+FL Y
Sbjct  70    QEFLQY  75


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3477  EEDK  3488
             EEDK
Sbjct  130   EEDK  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8609  LFKRK  8623
             LF RK
Sbjct  203   LFRRK  207


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5368  EQEMEPVDPR  5397
             E EM P + R
Sbjct  144   ENEMKPSEAR  153


>ref|NP_001108624.1|  CMRF35-like molecule 4 precursor [Homo sapiens]
 gb|ABM30606.1|  immune receptor CD300d [Homo sapiens]
Length=194

 GENE ID: 100131439 CD300LD | CD300 molecule-like family member d [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  6044  FLSHLPILL--L--VGWGLWVHR  5988
             FL  LP LL  L  V   LWV R
Sbjct  170   FLLELPLLLSMLGTV---LWVNR  189


 Score = 21.0 bits (42),  Expect(2) =   895
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -3

Query  3230  FLWLFF-ALPLL  3198
             FL LF   LPLL
Sbjct  166   FLFLFLLELPLL  177


 Score = 18.0 bits (35),  Expect(2) =   895
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLLS+L
Sbjct  176   LLLSML  181


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 11/30 (36%), Positives = 11/30 (36%), Gaps = 15/30 (50%)
 Frame = -3

Query  2447  LKNMHHPHPVLLLIFSFLTLRDVVFLIELP  2358
             LK  H         F FL      FL ELP
Sbjct  161   LKSTH---------FLFL------FLLELP  175


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3830  NYCDI  3816
             NYC+I
Sbjct  59    NYCNI  63


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1498  FLWFLKLPL  1472
             FL  L LPL
Sbjct  168   FLFLLELPL  176


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 5/17 (29%)
 Frame = +2

Query  5828  MLLGMLMICSATEKLWV  5878
             +LL ML     T  LWV
Sbjct  176   LLLSML----GTV-LWV  187


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 8/25 (32%)
 Frame = -2

Query  2235  IFPSFSISVQIS--TNAFIFSSVNG  2167
             I P +SI   I   T       VNG
Sbjct  11    ILPGYSIAAKITGPT------TVNG  29


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7656  WSGTE  7670
             W GTE
Sbjct  106   WCGTE  110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8488  QLPMLL  8505
             +LP+LL
Sbjct  173   ELPLLL  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1266  QEVK  1277
             QEVK
Sbjct  72    QEVK  75


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2417  LLLI  2406
             LLLI
Sbjct  8     LLLI  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  932  NVKRD  946
            N KRD
Sbjct  96   NLKRD  100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4870  LYLFFL  4853
             L+LF L
Sbjct  167   LFLFLL  172


>ref|NP_005609.3|  delta-like protein 1 precursor [Homo sapiens]
Length=723

 GENE ID: 28514 DLL1 | delta-like 1 (Drosophila) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 2/21 (9%)
 Frame = +2

Query  5015  IS-TILGTSSINNTKKDKATF  5074
             IS  I G   I NT K KA F
Sbjct  602   ISVSIIGATQIKNTNK-KADF  621


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1530  GHTARNCRAP  1559
             G T RNC AP
Sbjct  472   GYTGRNCSAP  481


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1514  ETLNNL  1497
             ET+NNL
Sbjct  588   ETMNNL  593


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  2768  VLSDVFCLVW  2739
             VLS   C VW
Sbjct  11    VLSALLCQVW  20


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6019  FLWVGVC  5999
             F WV VC
Sbjct  543   FPWVAVC  549


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  3089  ASVFLLLSLLMG  3054
             A V L L LL+G
Sbjct  550   AGVILVLMLLLG  561


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  99   VVCARL  116
            VVC RL
Sbjct  566  VVCVRL  571


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5725  DRLIDRL  5745
             +RLI RL
Sbjct  141   ERLISRL  147


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1304  DQQGFC  1287
             +Q+GFC
Sbjct  232   EQHGFC  237


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  7858  NSFCCT----FY  7881
             NS+ CT    FY
Sbjct  348   NSYSCTCPPGFY  359


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8263  FYNPICPLS  8237
             FY  IC LS
Sbjct  358   FYGKICELS  366


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2423  DVGDAY  2440
             D GDAY
Sbjct  422   DLGDAY  427


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5371  ALLCRV  5354
             ALLC V
Sbjct  14    ALLCQV  19


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  2593  FCHATLEYC  2567
             FC   L YC
Sbjct  284   FCNQDLNYC  292


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  8474  CDCSMFFQV  8448
             C C  FF V
Sbjct  54    CACRTFFRV  62


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +3

Query  5796  TCGDGGGDGAPC  5831
             TC DG     PC
Sbjct  369   TCADG-----PC  375


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  703  DTAIRSA  723
            DTA+R A
Sbjct  651  DTAVRDA  657


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7635  FGITRPG  7655
             FG T PG
Sbjct  112   FGFTWPG  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  8458  FSRSRDAA  8435
             F R RD A
Sbjct  191   FCRPRDDA  198


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5323  ELGVD  5337
             ELG+D
Sbjct  326   ELGID  330


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7566  LENSF  7580
             LENS+
Sbjct  346   LENSY  350


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             L LML L
Sbjct  554   LVLMLLL  560


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2331  NLIRELK  2351
             NL+ +LK
Sbjct  642   NLVQDLK  648


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  203  SGPCS-GA  183
            S PCS GA
Sbjct  411  SSPCSNGA  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4472  DFCCPC  4455
             DF C C
Sbjct  464   DFSCTC  469


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  1242  TLRAEQASQ  1268
             TLR  +AS+
Sbjct  680   TLRGGEASE  688


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  869  SHPTRF  886
            S P RF
Sbjct  105  SNPIRF  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5737  DRLIER  5754
             +RLI R
Sbjct  141   ERLISR  146


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  8317  LSYSSRYV  8294
             L YS R+V
Sbjct  171   LKYSYRFV  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  8843  CEPAWDG  8863
             C P W G
Sbjct  212   CNPGWKG  218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7585  GANEFS  7568
             G N+FS
Sbjct  461   GVNDFS  466


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8355  TCHPSY  8338
             TC P Y
Sbjct  468   TCPPGY  473


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1507  SVSIV  1521
             SVSI+
Sbjct  603   SVSII  607


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8198  YSLVPD  8181
             Y LV D
Sbjct  641   YNLVQD  646


>ref|NP_149083.2|  tripartite motif-containing protein 5 isoform gamma [Homo sapiens]
Length=347

 GENE ID: 85363 TRIM5 | tripartite motif-containing 5 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +3

Query  918  QAAMQMLKETINEEAAE  968
            QAA++ML +   +EA E
Sbjct  143  QAALEMLRQK-QQEAEE  158


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  621  LLSLSF  604
            LLSLSF
Sbjct  315  LLSLSF  320


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1911  CQEDG  1925
             CQEDG
Sbjct  106   CQEDG  110


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1446  TNSATIMMQ  1472
             TNS T M Q
Sbjct  215   TNSETEMVQ  223


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  6825  CSLNLLAICFKV  6790
             CSL  L  CFK+
Sbjct  324   CSL--LGSCFKI  333


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6023  VLVNVTE  6043
             +LVNV E
Sbjct  5     ILVNVKE  11


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3436  VSCPIYIE  3413
             V CPI  E
Sbjct  13    VTCPICLE  20


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3999  TRITFPS  3979
             T IT+PS
Sbjct  340   THITYPS  346


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3632  SESELVNQ  3655
             SE E+V Q
Sbjct  217   SETEMVQQ  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 1/16 (6%)
 Frame = -2

Query  6831  PNCSLN-LLAICFKVL  6787
             P C L  LL   F +L
Sbjct  308   PPCGLSLLLSLSFRIL  323


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8874  REVLEW  8891
             R++L+W
Sbjct  189   RDILDW  194


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7925  SETIMV  7908
             SET MV
Sbjct  217   SETEMV  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 18/39 (46%)
 Frame = -1

Query  523  CPSICL----QP-S-DVSNRPG-------LTANRSSSLL  446
            CP ICL    QP S D     G       LTAN   S+L
Sbjct  15   CP-ICLELLTQPLSLDC----GHSFCQACLTANHKKSML  48


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  8080  LERLT----LDC  8103
             LE LT    LDC
Sbjct  19    LELLTQPLSLDC  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5133  HRGSHT  5150
             HRG HT
Sbjct  123   HRGHHT  128


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8960  AVLEVLR  8940
             A LE LR
Sbjct  144   AALEMLR  150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7620  LLLQLAF  7600
             LLL L F
Sbjct  314   LLLSLSF  320


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8254  PICPLSY  8234
             P+C  SY
Sbjct  56    PVCRISY  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5924  LFCASDAK  5947
             LFC  D K
Sbjct  104   LFCQEDGK  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2837  EKDSW  2851
             EK SW
Sbjct  166   EKASW  170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5353  LLDRGE  5370
             +LD GE
Sbjct  47    MLDKGE  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QE EE
Sbjct  154   QEAEE  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE  EEE++
Sbjct  203   LE-KEEEDI  210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4451  KPENF  4437
             KPE F
Sbjct  264   KPETF  268


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8081  LRDLL  8095
             LRD L
Sbjct  188   LRDIL  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1565  KGLLE  1579
             KG+LE
Sbjct  282   KGMLE  286


>ref|NP_001726.2|  complement C5 preproprotein [Homo sapiens]
 sp|P01031.4|CO5_HUMAN  RecName: Full=Complement C5; AltName: Full=C3 and PZP-like alpha-2-macroglobulin 
domain-containing protein 4; Contains: RecName: 
Full=Complement C5 beta chain; Contains: RecName: Full=Complement 
C5 alpha chain; Contains: RecName: Full=C5a anaphylatoxin; 
Contains: RecName: Full=Complement C5 alpha' chain; 
Flags: Precursor
 gb|ABD48959.1|  complement component 5 [Homo sapiens]
 gb|AAI13741.1|  Complement component 5 [Homo sapiens]
Length=1676

 GENE ID: 727 C5 | complement component 5 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2177  EEKIKALVE  2203
             EE  KALVE
Sbjct  1436  EEDLKALVE  1444


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1632  FLGKIW  1649
             FLGK W
Sbjct  12    FLGKTW  17


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  2507  ETPGIRYQYNVL  2542
             E PGI Y   VL
Sbjct  341   EIPGIKY---VL  349


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6504  TVLTFV  6487
             TVLTF+
Sbjct  159   TVLTFI  164


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6851  RLLFYYFQIV  6822
             RLL YY  IV
Sbjct  539   RLLVYY--IV  546


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4553  VPRRK  4567
             VPRRK
Sbjct  780   VPRRK  784


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7379  LTVQARQL  7402
             LT+Q  QL
Sbjct  85    LTIQPKQL  92


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             N L HLP
Sbjct  998   NILTHLP  1004


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1251  LLEFYRTG  1228
             LL+ Y TG
Sbjct  1581  LLDIYKTG  1588


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  1990  YEYLIILS  1967
             Y YL ILS
Sbjct  499   YNYL-ILS  505


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2357  WEVQL  2371
             WEV+L
Sbjct  775   WEVHL  779


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4759  GMCTSE  4742
             G CTSE
Sbjct  864   GICTSE  869


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +3

Query  7209  EVNYIN--IK  7232
             ++NY+N  IK
Sbjct  1263  DINYVNPVIK  1272


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             LDL IS
Sbjct  1539  LDLTIS  1544


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1033  PLGSLIW  1013
             PL SL W
Sbjct  1638  PLDSLTW  1644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1786  YSSLS  1772
             YSSLS
Sbjct  457   YSSLS  461


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  5110  FHLSSVSFVT  5081
             FHL    F T
Sbjct  646   FHLAGLTFLT  655


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 19/40 (47%)
 Frame = +2

Query  7154  NNES--EIFRPGGGDMRDNWRS------EL---YKYKVVK  7240
             N+E   EI RP     R   R       E    YK  VVK
Sbjct  665   NDEPCKEILRP-----R---RTLQKKIEEIAAKYKHSVVK  696


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  2690  RT---KIEE  2707
             RT   KIEE
Sbjct  677   RTLQKKIEE  685


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = -3

Query  245  ESCVERAPLVSLSLSGP  195
            E C +RA  +SL   GP
Sbjct  709  ETCEQRAARISL---GP  722


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4317  NTAICTA  4297
             NT IC A
Sbjct  806   NTGICVA  812


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  172   IFHTD  158
             IFH D
Sbjct  1033  IFHSD  1037


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3524  SSDLLC  3507
             SSD LC
Sbjct  1469  SSDFLC  1474


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5316  IFRIG  5330
             IFR+G
Sbjct  30    IFRVG  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  5165  EL----LEELKN  5188
             EL    LE+L N
Sbjct  309   ELSYYSLEDLNN  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4808  RRKRLAF  4828
             RRK L F
Sbjct  782   RRKQLQF  788


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  792   DSLTTW  797


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  6405  QFPYII----VP  6428
             +FPY I    VP
Sbjct  958   EFPYRIPLDLVP  969


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2126  KLKPGM  2143
             KLK GM
Sbjct  1048  KLKEGM  1053


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1223  IVSKGF  1206
             IVS GF
Sbjct  1347  IVSTGF  1352


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2244  IFEIF  2230
             IFE F
Sbjct  1479  IFELF  1483


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1958  IKVRQYDQILI  1990
             +K RQY   LI
Sbjct  1612  VKGRQY---LI  1619


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5018  RSYLVM  5001
             R YL+M
Sbjct  1615  RQYLIM  1620


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3812  HVHL  3801
             HVHL
Sbjct  70    HVHL  73


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +2

Query  2411  VTVLDVGDAYFSV  2449
             VTVL+     F V
Sbjct  428   VTVLE-----FNV  435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4470  IHFG  4481
             IHFG
Sbjct  510   IHFG  513


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  769   FPESW  773


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3209  LPLLIVLH  3186
             LPL I LH
Sbjct  901   LPLEIGLH  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9086  PVQAKSSCLY  9057
             PV+A    LY
Sbjct  1134  PVEARENSLY  1143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8825  VLSFI  8811
             VL FI
Sbjct  160   VLTFI  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7572  FPEQPQIP  7549
             F E+ +IP
Sbjct  336   FSEEAEIP  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3173  AHTNDVKQ  3196
             A+T DV Q
Sbjct  392   AQTIDVNQ  399


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5799  CGDGGG  5816
             CG GGG
Sbjct  634   CGAGGG  639


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  4294  LK--MFSLISY  4268
             LK  M S  SY
Sbjct  1049  LKEGMLSIMSY  1059


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8879  FSLRV  8865
             F LRV
Sbjct  1081  FALRV  1085


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7003  TSFSVI  6986
             T F VI
Sbjct  1145  TAFTVI  1150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2781  QRNGGSF  2761
             QR GG F
Sbjct  1278  QRYGGGF  1284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +3

Query  7089  VDKL-------DVHQILQ  7121
             VD L       D H ILQ
Sbjct  1446  VDQLFTDYQIKDGHVILQ  1463


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6620  IIVQLN  6637
             +I QLN
Sbjct  1460  VILQLN  1465


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  290  VSTPKI  307
            +S PKI
Sbjct  25   ISAPKI  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7383  VSVIE  7369
             V VIE
Sbjct  327   VTVIE  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  8142  KPSNIGGISYSI  8177
             KP    GI Y I
Sbjct  364   KP----GIPYPI  371


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8733  PGVRYP  8750
             PG+ YP
Sbjct  365   PGIPYP  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5194  SFILKL  5177
             SF+L L
Sbjct  419   SFVLNL  424


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 11/36 (30%), Positives = 12/36 (33%), Gaps = 18/36 (50%)
 Frame = +2

Query  4565  KAKIIRDYGKQMAGDDCVASRQDED*NMEKFSKTPY  4672
             K KII  +G           R       EKFS   Y
Sbjct  506   KGKIIH-FG----------TR-------EKFSDASY  523


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3812  HVHLGP  3795
             +VHL P
Sbjct  572   QVHLSP  577


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3147  VFRFL  3133
             VF FL
Sbjct  623   VFQFL  627


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  489  ETSEGCRQIL  518
            E  E C +IL
Sbjct  664  ENDEPCKEIL  673


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8331  FCYKM  8345
             FC KM
Sbjct  855   FCVKM  859


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4358  CTPQSP  4341
             CT +SP
Sbjct  866   CTSESP  871


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +1

Query  6688  NPYPERTRESIC  6723
             N Y E    SIC
Sbjct  1090  NKYVEQNQNSIC  1101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4225  YSLTLG  4208
             Y L LG
Sbjct  1193  YALSLG  1198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  5862  VALQIINIPRS  5830
             V LQ   IP S
Sbjct  1460  VILQLNSIPSS  1470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7156  VAITTI  7139
             V IT I
Sbjct  1563  VSITSI  1568


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -1

Query  6901  IKTVRYNF  6878
             IK   YNF
Sbjct  1627  IK---YNF  1631


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1614  YNLSF  1600
             YN SF
Sbjct  1629  YNFSF  1633


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8965  CQQFL  8951
             CQ FL
Sbjct  1657  CQAFL  1661


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7071  IAFPTF  7054
             I FP F
Sbjct  183   ISFPDF  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4708  DITMKA  4725
             +IT KA
Sbjct  247   EITIKA  252


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             YLY D
Sbjct  464   YLYID  468


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  715  RSAKITL  735
            R A I L
Sbjct  714  RAARISL  720


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6530  VVSTQL  6547
             VV  QL
Sbjct  733   VVASQL  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  786   LQFAL  790


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4386  IMSTILS  4366
             I+S +LS
Sbjct  987   ILSAVLS  993


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7030  YSAWEG  7013
             YS W G
Sbjct  1066  YSVWKG  1071


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2284  KEKRQY  2301
             KE  QY
Sbjct  1119  KENSQY  1124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2549  PVEA  2538
             PVEA
Sbjct  1134  PVEA  1137


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5460  FTIAI  5446
             FT AI
Sbjct  1186  FTLAI  1190


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  8681  PQIKDILSSL  8652
             PQ   I S L
Sbjct  1203  PQFRSIVSAL  1212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2555  KGSPAIF  2575
             KG P I+
Sbjct  1219  KGNPPIY  1225


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1131  IILGLNKI  1154
             +IL LN I
Sbjct  1460  VILQLNSI  1467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4040  IPAETGQETA  4069
             I AET  +TA
Sbjct  1543  ISAETRKQTA  1552


>pdb|1GYF|A  Chain A, Gyf Domain From Human Cd2bp2 Protein
Length=62


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  8679  WIYHTQGYFPD  8711
             W+   +GYFPD
Sbjct  28    WV--SEGYFPD  36


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6779  KWNNT  6793
             KW NT
Sbjct  7     KWENT  11


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5461  FYNS  5450
             FYNS
Sbjct  50    FYNS  53


>ref|NP_001171571.1|  T-cell surface glycoprotein CD8 beta chain isoform 6 precursor 
[Homo sapiens]
Length=198

 GENE ID: 926 CD8B | CD8b molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIYWL
Sbjct  51    RIYWL  55


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  168  STLTKRV  148
            STL KRV
Sbjct  148  STLKKRV  154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -1

Query  8446  RDAAPTLSAAGSARLILSLT  8387
             RDA          R IL LT
Sbjct  94    RDAS---------RFILNLT  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  337  WVRERQ  354
            W R+RQ
Sbjct  54   WLRQRQ  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3116  IYQEP  3130
             +YQEP
Sbjct  170   VYQEP  174


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5207  PRIWL  5221
             PR WL
Sbjct  3     PRLWL  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7823  FIMIVG  7840
             F MIVG
Sbjct  115   FCMIVG  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8656  EDKISL  8673
             E KISL
Sbjct  42    EAKISL  47


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  67    HEFLAL  72


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5366  PLSSNA  5349
             PLS NA
Sbjct  174   PLSPNA  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5191  FILKL  5177
             FIL L
Sbjct  99    FILNL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5028  SIVEILP  5008
             S+V+ LP
Sbjct  133   SVVDFLP  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9035  LPSPAQAT  9012
             LP  AQ T
Sbjct  138   LPTTAQPT  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7961  RACRVP  7944
             R CR P
Sbjct  153   RVCRLP  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8784  VEPDKI  8801
             VE +KI
Sbjct  85    VEQEKI  90


>ref|NP_009086.4|  zona pellucida sperm-binding protein 3 isoform 2 [Homo sapiens]
Length=373

 GENE ID: 7784 ZP3 | zona pellucida glycoprotein 3 (sperm receptor)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  256  FSKPSPASRELLWFP  212
            FSKPS       WFP
Sbjct  251  FSKPSNS-----WFP  260


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = -1

Query  1963  FDKTSNSPYHFWFP  1922
             F K SNS    WFP
Sbjct  251   FSKPSNS----WFP  260


 Score = 19.3 bits (38),  Expect(2) =  1249
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5345  NRRYSTEE  5368
             NRR  TEE
Sbjct  299   NRRHVTEE  306


 Score = 18.9 bits (37),  Expect(2) =  1249
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +1

Query  5356  LDR-GEQEME  5382
             LDR G++E E
Sbjct  317   LDRRGDHEVE  326


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  6554  LTAVELIL  6531
             LTAV L+L
Sbjct  351   LTAVILVL  358


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6762  VTLVEQN  6782
             VTL EQ+
Sbjct  235   VTLAEQD  241


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -3

Query  245  ESCVERAPLVSL  210
            E C E  PLVS+
Sbjct  25   EAC-E--PLVSM  33


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  8   LVRP-DLSLG  34
           L+R  DL LG
Sbjct  14  LIRAADLTLG  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  9093  LVRP-DLSLG  9119
             L+R  DL LG
Sbjct  14    LIRAADLTLG  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4836  PDPNAS  4819
             PD NAS
Sbjct  172   PDQNAS  177


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  929  HGCL  918
            HGCL
Sbjct  186  HGCL  189


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  712  IRSAKITL  735
            IR A  TL
Sbjct  15   IRAADLTL  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  124  SHNRR  110
            SH RR
Sbjct  280  SHSRR  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = +3

Query  516  LG---QLQPSLQTGS  551
            LG   +LQ   +TGS
Sbjct  141  LGDAAHLQAEIHTGS  155


>ref|NP_001127925.1|  desmoglein-4 isoform 1 preproprotein [Homo sapiens]
Length=1059

 GENE ID: 147409 DSG4 | desmoglein 4 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 10/18 (55%)
 Frame = -3

Query  8537  LLLLLCF*PGTSSIGSCC  8484
             LLLLLC          CC
Sbjct  648   LLLLLC----------CC  655


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5386  LAPFLALLC  5360
             LAP L LLC
Sbjct  645   LAPLLLLLC  653


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7282  SGAERKKSS  7308
             SGA RK SS
Sbjct  772   SGAARKRSS  780


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4522  YCPFTFPE  4499
             YCP  FPE
Sbjct  493   YCPNIFPE  500


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2576  GILLVIL  2556
             GILL IL
Sbjct  639   GILLLIL  645


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +1

Query  6538  NSTAVKWQSSRR  6573
             N T  KWQ  RR
Sbjct  36    NGTT-KWQTVRR  46


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7477  CELQQM  7460
             CEL QM
Sbjct  576   CELAQM  581


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +3

Query  7269  RQREEW------CRE  7295
             RQ  EW      CRE
Sbjct  46    RQKREWIKFAAACRE  60


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -3

Query  2900  DLP-----NSISPLTS  2868
             DLP      S SP+TS
Sbjct  1029  DLPIGQTVGSTSPMTS  1044


 Score = 18.5 bits (36),  Expect(2) =  7567
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVLAS
Sbjct  985   ERVLAS  990


 Score = 15.5 bits (29),  Expect(2) =  7567
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3240  YGERLL  3257
             Y ER L
Sbjct  983   YAERVL  988


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2860  IDSPAV  2843
             IDSP V
Sbjct  506   IDSPSV  511


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  4342  PFSFKIVDE  4316
             PF F +VDE
Sbjct  523   PFTFCVVDE  531


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5181  LRMKLLDI  5204
             LR K +DI
Sbjct  143   LRVKVMDI  150


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W VDDL
Sbjct  842   WIVDDL  847


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 11/21 (52%)
 Frame = +2

Query  6842  TIIFKQSSGGDPE-----IVT  6889
             TIIF      DP+     +VT
Sbjct  941   TIIF------DPQLAPNVVVT  955


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7183  SRSEDL  7166
             SR EDL
Sbjct  132   SRGEDL  137


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3811  MFIL  3800
             MFIL
Sbjct  208   MFIL  211


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4474  TLERTS  4491
             TLE TS
Sbjct  268   TLEKTS  273


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8172  SIGVRN  8189
             SIGV N
Sbjct  348   SIGVKN  353


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5238  ISMKLMGIL  5264
             I M  +GIL
Sbjct  633   IGMMVLGIL  641


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  7510  DSCLELLD  7487
             +SC+E LD
Sbjct  849   ESCMETLD  856


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2417  VLDVGD  2434
             VLDV D
Sbjct  259   VLDVND  264


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7431  LFCCC  7417
             L CCC
Sbjct  651   LLCCC  655


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8131  QGVGSP  8148
             +GVGSP
Sbjct  828   EGVGSP  833


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2846  SWTVND  2863
             SW V+D
Sbjct  841   SWIVDD  846


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1185  DIRQGP  1202
             D+R+GP
Sbjct  378   DVREGP  383


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8158  VESPTVLES  8184
             ++SP VL S
Sbjct  506   IDSPSVLIS  514


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4350  GGTVQG  4367
             GGTV+G
Sbjct  741   GGTVEG  746


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -1

Query  8380  HPITLLFD-HLPP  8345
             +P T  FD +L P
Sbjct  938   QPTTIIFDPQLAP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1156  TILFNP  1139
             TI F+P
Sbjct  941   TIIFDP  946


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4818  LFLLY  4804
             LFL Y
Sbjct  122   LFLIY  126


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3971  YNLV  3960
             YNLV
Sbjct  233   YNLV  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1215  RDYVD  1229
             RDY D
Sbjct  786   RDYAD  790


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7410  PDNNCL  7393
             P N+CL
Sbjct  817   PANDCL  822


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3832  PITVIF  3815
             P T+IF
Sbjct  939   PTTIIF  944


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2669  DLEIGQ  2686
             DL IGQ
Sbjct  1029  DLPIGQ  1034


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7417  HYTRQ  7403
             HYT Q
Sbjct  1055  HYTQQ  1059


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2264  NTPVF  2278
             N PVF
Sbjct  153   NAPVF  157


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2631  TMSGF  2617
             TMS F
Sbjct  220   TMSSF  224


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4461  TAEIHF  4478
             T EI+F
Sbjct  443   TGEIQF  448


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5822  GTMLLGMLM  5848
             G M LG L+
Sbjct  634   GMMVLGILL  642


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2420  VLLLI  2406
             +LLLI
Sbjct  640   ILLLI  644


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6774  LLMLQCAC  6751
             LL+L C C
Sbjct  648   LLLLLCCC  655


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  492   TSEGC  506
             T EGC
Sbjct  1001  TTEGC  1005


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = +1

Query  3859  ATC-----SSKRN  3882
             A C      SKRN
Sbjct  56    AACREGEDNSKRN  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4801  RPQYVVIT  4778
             RP Y V T
Sbjct  94    RPPYGVFT  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5930  CASDA  5944
             CA DA
Sbjct  180   CATDA  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8769  YKLVPVEP  8792
             YK V  EP
Sbjct  196   YKIVSQEP  203


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4266  CPIIF  4252
             CP IF
Sbjct  494   CPNIF  498


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4645  VLILIL  4628
             +L LIL
Sbjct  640   ILLLIL  645


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  864  EGATPQD  884
            EGA P+D
Sbjct  684  EGAHPED  690


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6626  VQLNT  6640
             V+LNT
Sbjct  751   VELNT  755


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3694  GMGT  3705
             GMGT
Sbjct  756   GMGT  759


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7781  STNLP  7767
             ST+LP
Sbjct  884   STDLP  888


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7286  VQREKR  7303
             V R+KR
Sbjct  44    VRRQKR  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6897  KLCVT  6883
             KLC T
Sbjct  178   KLCAT  182


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5184  RMKLLDI  5204
             R K LD+
Sbjct  256   RIKVLDV  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2818  TAYSA  2832
             T YSA
Sbjct  272   TSYSA  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6641  SVEINC  6658
             S+E NC
Sbjct  277   SIEENC  282


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6439  KTSRGTI  6419
             KT  GTI
Sbjct  477   KTATGTI  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6023  VLVNVTE  6043
             VL+ V E
Sbjct  511   VLISVNE  517


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  375  LILPRLIL  352
            LIL  L L
Sbjct  643  LILAPLLL  650


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5377  MEPVDP  5394
             ME  DP
Sbjct  852   METLDP  857


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2735  VPTSTD  2718
             +P STD
Sbjct  881   IPISTD  886


>ref|NP_776215.1|  interleukin-1 receptor antagonist protein isoform 4 [Homo sapiens]
Length=143

 GENE ID: 3557 IL1RN | interleukin 1 receptor antagonist [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6424  CPGWF  6438
             CPGWF
Sbjct  107   CPGWF  111


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6302  KLDIIPID  6325
             K D++PI+
Sbjct  36    KIDVVPIE  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4838  SLTQMP  4821
             SLT MP
Sbjct  123   SLTNMP  128


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8755  VSGYLTPGPGV  8723
             V GYL  GP V
Sbjct  22    VAGYL-QGPNV  31


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +2

Query  7496  LQA-RILAVER---YLKDQQL  7546
             +QA RI  V     YL + QL
Sbjct  1     MQAFRIWDVNQKTFYLRNNQL  21


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2207  CTEME  2221
             CT ME
Sbjct  113   CTAME  117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8778  VPVEP  8792
             VP+EP
Sbjct  40    VPIEP  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             +LEE I
Sbjct  32    NLEEKI  37


>gb|AAC41969.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  198   KMLSGVGGFV  207


 Score = 19.7 bits (39),  Expect(2) =  1397
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5843  LMICSATE  5866
             L+ICS T+
Sbjct  114   LLICSVTD  121


 Score = 18.5 bits (36),  Expect(2) =  1397
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5695  YRKILRQRKID  5727
             YR IL QR ++
Sbjct  87    YRGIL-QRRVE  96


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VTPQ   RPV
Sbjct  50    VTPQG--RPV  57


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = -1

Query  7192  ISSSRSEDLG----LIVAIT  7145
             IS SR E L     LI  +T
Sbjct  101   ISPSRTEALNHHNLLICSVT  120


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = +3

Query  1656  YKGRPGNFLQSRPEPT  1703
             Y G     LQ R EPT
Sbjct  87    YRG----ILQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  199   MLSGVG  204


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  190  AQSESA--Q--SKMLSGVGG  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41971.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  198   KMLSGVGGFV  207


 Score = 19.7 bits (39),  Expect(2) =  1397
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5843  LMICSATE  5866
             L+ICS T+
Sbjct  114   LLICSVTD  121


 Score = 18.5 bits (36),  Expect(2) =  1397
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5695  YRKILRQRKID  5727
             YR IL QR ++
Sbjct  87    YRGIL-QRRVE  96


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = -1

Query  7192  ISSSRSEDLG----LIVAIT  7145
             IS SR E L     LI  +T
Sbjct  101   ISPSRTEALNHHNLLICSVT  120


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = +3

Query  1656  YKGRPGNFLQSRPEPT  1703
             Y G     LQ R EPT
Sbjct  87    YRG----ILQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  199   MLSGVG  204


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  6357  VTPQSLHRP  6383
             VTPQ   RP
Sbjct  50    VTPQG--RP  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  190  AQSESA--Q--SKMLSGVGG  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41975.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  198   KMLSGVGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +3

Query  6357  VTPQSLHRPV  6386
             VTPQ   RPV
Sbjct  50    VTPQG--RPV  57


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4465  QKSTLERT  4488
             QK  LERT
Sbjct  64    QKEVLERT  71


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = +3

Query  1656  YKGRPGNFLQSRPEPT  1703
             Y G     LQ R EPT
Sbjct  87    YRG----ILQRRVEPT  98


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  199   MLSGVG  204


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5695  YRKILRQRKID  5727
             YR IL QR ++
Sbjct  87    YRGIL-QRRVE  96


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +3

Query  8610  FLKEKGGLEGLIHSQRRQ  8663
             FL    GL GLI  QR Q
Sbjct  212   FL----GL-GLIIRQRSQ  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  190  AQSESA--Q--SKMLSGVGG  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             + EVLE
Sbjct  64    QKEVLE  69


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAC41970.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  198   KMLSGVGGFV  207


 Score = 19.7 bits (39),  Expect(2) =  1397
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5843  LMICSATE  5866
             L+ICS T+
Sbjct  114   LLICSVTD  121


 Score = 18.5 bits (36),  Expect(2) =  1397
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5695  YRKILRQRKID  5727
             YR IL QR ++
Sbjct  87    YRGIL-QRRVE  96


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = -1

Query  7192  ISSSRSEDLG----LIVAIT  7145
             IS SR E L     LI  +T
Sbjct  101   ISPSRTEALNHHNLLICSVT  120


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 8/16 (50%), Gaps = 4/16 (25%)
 Frame = +3

Query  1656  YKGRPGNFLQSRPEPT  1703
             Y G     LQ R EPT
Sbjct  87    YRG----ILQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  199   MLSGVG  204


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  6357  VTPQSLHRP  6383
             VTPQ   RP
Sbjct  50    VTPQG--RP  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  190  AQSESA--Q--SKMLSGVGG  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>ref|NP_570118.1|  mucosal addressin cell adhesion molecule 1 isoform b precursor 
[Homo sapiens]
Length=295

 GENE ID: 8174 MADCAM1 | mucosal vascular addressin cell adhesion molecule 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8517  EAQEEEE  8537
             E QEEEE
Sbjct  167   EVQEEEE  173


 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 10/29 (34%)
 Frame = -3

Query  3110  MSIGLAPASVFLLLS----LLMGHNTLHV  3036
             M  GLA     LLL     LL+G+  L+V
Sbjct  1     MDFGLA-----LLLAGLLGLLLGQ-SLQV  23


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 5/16 (31%)
 Frame = +1

Query  9016  AWAGL-GSGE----PS  9048
             AWAGL G G+    PS
Sbjct  280   AWAGLRGTGQVGISPS  295


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +3

Query  2502  TMRHQGLDISTMCFHR  2549
             TMR  GL+ S    HR
Sbjct  207   TMRLPGLELS----HR  218


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -1

Query  8452  RS----RDAAPTLSAAG  8414
             RS    R+A   LSAAG
Sbjct  76    RSVLTVRNAS--LSAAG  90


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -3

Query  2426  HPVLLLIFSF---LT  2391
             H V LL++ F   LT
Sbjct  105   HTVQLLVYAFPDQLT  119


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1849  PPYLYC  1832
             PP LYC
Sbjct  199   PPALYC  204


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  4155  LTVAPVKLLP  4126
             LTV P  L P
Sbjct  118   LTVSPAALVP  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = +2

Query  5954  DTEV----HNVWATHACVPTDPN  6010
             D EV    H V  T    P DPN
Sbjct  129   DPEVACTAHKV--T----PVDPN  145


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = -1

Query  5425  DF-LDASRALV*DLLAPFLALL  5363
             DF L    AL   LLA  L LL
Sbjct  2     DFGL----AL---LLAGLLGLL  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4582  PNDLCFS  4562
             PN L FS
Sbjct  144   PNALSFS  150


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3403  SRNLLCR  3423
             SR L CR
Sbjct  42    SRQLTCR  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8775  LVPVEPD  8795
             LVP +P+
Sbjct  125   LVPGDPE  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8772  KLVPVEPD  8795
             K  PV+P+
Sbjct  138   KVTPVDPN  145


>gb|AAC41974.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  198   KMLSGVGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  199   MLSGVG  204


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +3

Query  8610  FLKEKGGLEGLIHSQRRQ  8663
             FL    GL GLI  QR Q
Sbjct  212   FL----GL-GLIIRQRSQ  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  6357  VTPQSLHRP  6383
             VTPQ   RP
Sbjct  50    VTPQG--RP  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  190  AQSESA--Q--SKMLSGVGG  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAK91825.1|  MHC class II antigen [Homo sapiens]
Length=266

 GENE ID: 3123 HLA-DRB1 | major histocompatibility complex, class II, DR beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  227   KMLSGVGGFV  236


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 9/23 (39%)
 Frame = -2

Query  4188  SCLIPAHQQAALTVAPVKLLPLS  4120
             SC+      AALTV    L+ LS
Sbjct  10    SCM------AALTVT---LMVLS  23


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  3080  IQKQGQGQWTYQ  3115
             IQ    G WT+Q
Sbjct  177   IQN---GDWTFQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  228   MLSGVG  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5306  LFIHFQN  5326
             LFI F N
Sbjct  246   LFIYFRN  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2035  YTCQ  2046
             YTCQ
Sbjct  200   YTCQ  203


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1026  VLSSGLVQ  1003
             V S GL+Q
Sbjct  171   VVSTGLIQ  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1482  FRNQ  1493
             FRNQ
Sbjct  250   FRNQ  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -2

Query  6633  SC------TIMVL  6613
             SC      T MVL
Sbjct  10    SCMAALTVTLMVL  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 11/24 (45%)
 Frame = -3

Query  1373  HFF*CSRWSQCF*NSLTIWVRILD  1302
             HFF          N  T  VR LD
Sbjct  45    HFF----------NG-TERVRFLD  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T + LV+LE
Sbjct  183   TFQTLVMLE  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = +3

Query  861  SEGATPQDLNTMLNTVGG  914
            SE A  Q    ML  VGG
Sbjct  221  SESA--Q--SKMLSGVGG  234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGL +
Sbjct  235   FVLGLLF  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4930  FQTL  4941
             FQTL
Sbjct  184   FQTL  187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  5171  LEELKNEAVRHF  5206
             LE+ K E   HF
Sbjct  37    LEQVKHEC--HF  46


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  87    AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  87  AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  894  MLNTV  908
            ML TV
Sbjct  189  MLETV  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QR V
Sbjct  119   TVQRRV  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             +Y C V H
Sbjct  199   VYTCQVEH  206


>ref|NP_570116.2|  mucosal addressin cell adhesion molecule 1 isoform a precursor 
[Homo sapiens]
Length=382

 GENE ID: 8174 MADCAM1 | mucosal vascular addressin cell adhesion molecule 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8517  EAQEEEE  8537
             E QEEEE
Sbjct  167   EVQEEEE  173


 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 10/29 (34%)
 Frame = -3

Query  3110  MSIGLAPASVFLLLS----LLMGHNTLHV  3036
             M  GLA     LLL     LL+G+  L+V
Sbjct  1     MDFGLA-----LLLAGLLGLLLGQ-SLQV  23


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 5/16 (31%)
 Frame = +1

Query  9016  AWAGL-GSGE----PS  9048
             AWAGL G G+    PS
Sbjct  367   AWAGLRGTGQVGISPS  382


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +3

Query  2502  TMRHQGLDISTMCFHR  2549
             TMR  GL+ S    HR
Sbjct  207   TMRLPGLELS----HR  218


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = -1

Query  8452  RS----RDAAPTLSAAG  8414
             RS    R+A   LSAAG
Sbjct  76    RSVLTVRNAS--LSAAG  90


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -3

Query  2426  HPVLLLIFSF---LT  2391
             H V LL++ F   LT
Sbjct  105   HTVQLLVYAFPDQLT  119


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1849  PPYLYC  1832
             PP LYC
Sbjct  199   PPALYC  204


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  4155  LTVAPVKLLP  4126
             LTV P  L P
Sbjct  118   LTVSPAALVP  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = +2

Query  5954  DTEV----HNVWATHACVPTDPN  6010
             D EV    H V  T    P DPN
Sbjct  129   DPEVACTAHKV--T----PVDPN  145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +2

Query  4034  EVIPAETG  4057
             EVIP  TG
Sbjct  304   EVIP--TG  309


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = -1

Query  5425  DF-LDASRALV*DLLAPFLALL  5363
             DF L    AL   LLA  L LL
Sbjct  2     DFGL----AL---LLAGLLGLL  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4582  PNDLCFS  4562
             PN L FS
Sbjct  144   PNALSFS  150


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 8/20 (40%)
 Frame = +1

Query  184  APEQG-------PESERETR  222
            AP+QG       P S R TR
Sbjct  273  APQQGSTHTPRSPGSTR-TR  291


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3403  SRNLLCR  3423
             SR L CR
Sbjct  42    SRQLTCR  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8775  LVPVEPD  8795
             LVP +P+
Sbjct  125   LVPGDPE  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8772  KLVPVEPD  8795
             K  PV+P+
Sbjct  138   KVTPVDPN  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8047  SAEPVPLQ  8070
             S EP P Q
Sbjct  269   SPEPAPQQ  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1027  QGEV  1038
             QGEV
Sbjct  302   QGEV  305


>ref|NP_757362.1|  T-cell surface glycoprotein CD8 beta chain isoform 2 precursor 
[Homo sapiens]
Length=243

 GENE ID: 926 CD8B | CD8b molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIYWL
Sbjct  51    RIYWL  55


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 7/15 (46%)
 Frame = -1

Query  3838  CSPITVIFLMFILGL  3794
             CSPIT       LGL
Sbjct  168   CSPIT-------LGL  175


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  168  STLTKRV  148
            STL KRV
Sbjct  148  STLKKRV  154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -1

Query  8446  RDAAPTLSAAGSARLILSLT  8387
             RDA          R IL LT
Sbjct  94    RDAS---------RFILNLT  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  1017  MREPRGSDIAGT  1052
             M +P G  I GT
Sbjct  205   MKQPQGEGISGT  216


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  337  WVRERQ  354
            W R+RQ
Sbjct  54   WLRQRQ  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5358  RQRRAR  5375
             R RRAR
Sbjct  196   RRRRAR  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5207  PRIWL  5221
             PR WL
Sbjct  3     PRLWL  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7823  FIMIVG  7840
             F MIVG
Sbjct  115   FCMIVG  120


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = +3

Query  7590  LC----LGMLV-GV  7616
             LC    LG+LV GV
Sbjct  167   LCSPITLGLLVAGV  180


 Score = 17.2 bits (33),  Expect(2) = 23193
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8656  EDKISL  8673
             E KISL
Sbjct  42    EAKISL  47


 Score = 15.5 bits (29),  Expect(2) = 23193
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8784  VEPDKI  8801
             VE +KI
Sbjct  85    VEQEKI  90


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  67    HEFLAL  72


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7168  LGLIVA  7151
             LGL VA
Sbjct  173   LGLLVA  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5191  FILKL  5177
             FIL L
Sbjct  99    FILNL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5028  SIVEILP  5008
             S+V+ LP
Sbjct  133   SVVDFLP  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9035  LPSPAQAT  9012
             LP  AQ T
Sbjct  138   LPTTAQPT  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7961  RACRVP  7944
             R CR P
Sbjct  153   RVCRLP  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2691  LCCPI  2677
             LC PI
Sbjct  167   LCSPI  171


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6363  PQSLH  6377
             PQ LH
Sbjct  219   PQCLH  223


>gb|AAC41973.1|  MHC class II HLA-DQ-beta-1 [Homo sapiens]
Length=229

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  198   KMLSGVGGFV  207


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  151   GDWTFQI  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  206   FVLGLIF  212


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  101   ISPSRTEAL  109


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  51    TPQGRP  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  91    LQRRVEPT  98


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  154   TFQILVMLE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  199   MLSGVG  204


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +3

Query  8610  FLKEKGGLEGLIHSQRRQ  8663
             FL    GL GLI  QR Q
Sbjct  212   FL----GL-GLIIRQRSQ  224


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  80    RHNYE  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  177   HPSLQSP  183


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  6357  VTPQSLHRP  6383
             VTPQ   RP
Sbjct  50    VTPQG--RP  56


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  119   VTDFY  123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  190  AQSESA--Q--SKMLSGVGG  205


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  211   IFLGLGLIIR  220


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  47    YRAVTPQG  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  214  GLGLIIRQR  222


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  218   IIRQR  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  93    RRVEP  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  132  FRNDQ  136


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  177  HPSLQ  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  132   FRNDQ  136


>gb|AAA59777.1|  MHC class II HLA-DR-beta [Homo sapiens]
Length=266

 GENE ID: 3123 HLA-DRB1 | major histocompatibility complex, class II, DR beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  227   KMLSGVGGFV  236


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  3080  IQKQGQGQWTYQ  3115
             IQ    G WT+Q
Sbjct  177   IQN---GDWTFQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  228   MLSGVG  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5306  LFIHFQN  5326
             LFI F N
Sbjct  246   LFIYFRN  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2035  YTCQ  2046
             YTCQ
Sbjct  200   YTCQ  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2768  PPFLW  2782
             P FLW
Sbjct  34    PRFLW  38


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1482  FRNQ  1493
             FRNQ
Sbjct  250   FRNQ  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -2

Query  6633  SC------TIMVL  6613
             SC      T MVL
Sbjct  10    SCMTALTVTLMVL  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 11/24 (45%)
 Frame = -3

Query  1373  HFF*CSRWSQCF*NSLTIWVRILD  1302
             HFF          N  T  VR LD
Sbjct  45    HFF----------NG-TERVRFLD  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T + LV+LE
Sbjct  183   TFQTLVMLE  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = +3

Query  861  SEGATPQDLNTMLNTVGG  914
            SE A  Q    ML  VGG
Sbjct  221  SESA--Q--SKMLSGVGG  234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGL +
Sbjct  235   FVLGLLF  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4930  FQTL  4941
             FQTL
Sbjct  184   FQTL  187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  87    AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  87  AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  492  FLTGQD  475
            FL GQ+
Sbjct  161  FLNGQE  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  894  MLNTV  908
            ML TV
Sbjct  189  MLETV  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QR V
Sbjct  119   TVQRRV  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1020  SSGLVQ  1003
             S GL+Q
Sbjct  173   STGLIQ  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             +Y C V H
Sbjct  199   VYTCQVEH  206


>gb|AAA51856.1|  complement component C5 [Homo sapiens]
Length=1265

 GENE ID: 727 C5 | complement component 5 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2177  EEKIKALVE  2203
             EE  KALVE
Sbjct  1025  EEDLKALVE  1033


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6851  RLLFYYFQIV  6822
             RLL YY  IV
Sbjct  128   RLLVYY--IV  135


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4553  VPRRK  4567
             VPRRK
Sbjct  369   VPRRK  373


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             N L HLP
Sbjct  587   NILTHLP  593


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1251  LLEFYRTG  1228
             LL+ Y TG
Sbjct  1170  LLDIYKTG  1177


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  1990  YEYLIILS  1967
             Y YL ILS
Sbjct  88    YNYL-ILS  94


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2357  WEVQL  2371
             WEV+L
Sbjct  364   WEVHL  368


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4759  GMCTSE  4742
             G CTSE
Sbjct  453   GICTSE  458


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +3

Query  7209  EVNYIN--IK  7232
             ++NY+N  IK
Sbjct  852   DINYVNPVIK  861


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             LDL IS
Sbjct  1128  LDLTIS  1133


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1033  PLGSLIW  1013
             PL SL W
Sbjct  1227  PLDSLTW  1233


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1786  YSSLS  1772
             YSSLS
Sbjct  46    YSSLS  50


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  5110  FHLSSVSFVT  5081
             FHL    F T
Sbjct  235   FHLAGLTFLT  244


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 19/40 (47%)
 Frame = +2

Query  7154  NNES--EIFRPGGGDMRDNWRS------EL---YKYKVVK  7240
             N+E   EI RP     R   R       E    YK  VVK
Sbjct  254   NDEPCKEILRP-----R---RTLQKKIEEIAAKYKHSVVK  285


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  2690  RT---KIEE  2707
             RT   KIEE
Sbjct  266   RTLQKKIEE  274


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = -3

Query  245  ESCVERAPLVSLSLSGP  195
            E C +RA  +SL   GP
Sbjct  298  ETCEQRAARISL---GP  311


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4317  NTAICTA  4297
             NT IC A
Sbjct  395   NTGICVA  401


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  172  IFHTD  158
            IFH D
Sbjct  622  IFHSD  626


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3524  SSDLLC  3507
             SSD LC
Sbjct  1058  SSDFLC  1063


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4808  RRKRLAF  4828
             RRK L F
Sbjct  371   RRKQLQF  377


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  381   DSLTTW  386


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  6405  QFPYII----VP  6428
             +FPY I    VP
Sbjct  547   EFPYRIPLDLVP  558


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2126  KLKPGM  2143
             KLK GM
Sbjct  637   KLKEGM  642


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1223  IVSKGF  1206
             IVS GF
Sbjct  936   IVSTGF  941


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2244  IFEIF  2230
             IFE F
Sbjct  1068  IFELF  1072


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1958  IKVRQYDQILI  1990
             +K RQY   LI
Sbjct  1201  VKGRQY---LI  1208


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5018  RSYLVM  5001
             R YL+M
Sbjct  1204  RQYLIM  1209


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +2

Query  2411  VTVLDVGDAYFSV  2449
             VTVL+     F V
Sbjct  17    VTVLE-----FNV  24


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4470  IHFG  4481
             IHFG
Sbjct  99    IHFG  102


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  358   FPESW  362


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3209  LPLLIVLH  3186
             LPL I LH
Sbjct  490   LPLEIGLH  497


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9086  PVQAKSSCLY  9057
             PV+A    LY
Sbjct  723   PVEARENSLY  732


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5799  CGDGGG  5816
             CG GGG
Sbjct  223   CGAGGG  228


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  4294  LK--MFSLISY  4268
             LK  M S  SY
Sbjct  638   LKEGMLSIMSY  648


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8879  FSLRV  8865
             F LRV
Sbjct  670   FALRV  674


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7003  TSFSVI  6986
             T F VI
Sbjct  734   TAFTVI  739


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2781  QRNGGSF  2761
             QR GG F
Sbjct  867   QRYGGGF  873


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +3

Query  7089  VDKL-------DVHQILQ  7121
             VD L       D H ILQ
Sbjct  1035  VDQLFTDYQIKDGHVILQ  1052


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6620  IIVQLN  6637
             +I QLN
Sbjct  1049  VILQLN  1054


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5194  SFILKL  5177
             SF+L L
Sbjct  8     SFVLNL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 11/36 (30%), Positives = 12/36 (33%), Gaps = 18/36 (50%)
 Frame = +2

Query  4565  KAKIIRDYGKQMAGDDCVASRQDED*NMEKFSKTPY  4672
             K KII  +G           R       EKFS   Y
Sbjct  95    KGKIIH-FG----------TR-------EKFSDASY  112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3812  HVHLGP  3795
             +VHL P
Sbjct  161   QVHLSP  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3147  VFRFL  3133
             VF FL
Sbjct  212   VFQFL  216


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  489  ETSEGCRQIL  518
            E  E C +IL
Sbjct  253  ENDEPCKEIL  262


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8331  FCYKM  8345
             FC KM
Sbjct  444   FCVKM  448


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4358  CTPQSP  4341
             CT +SP
Sbjct  455   CTSESP  460


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +1

Query  6688  NPYPERTRESIC  6723
             N Y E    SIC
Sbjct  679   NKYVEQNQNSIC  690


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4225  YSLTLG  4208
             Y L LG
Sbjct  782   YALSLG  787


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  5862  VALQIINIPRS  5830
             V LQ   IP S
Sbjct  1049  VILQLNSIPSS  1059


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7156  VAITTI  7139
             V IT I
Sbjct  1152  VSITSI  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -1

Query  6901  IKTVRYNF  6878
             IK   YNF
Sbjct  1216  IK---YNF  1220


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1614  YNLSF  1600
             YN SF
Sbjct  1218  YNFSF  1222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8965  CQQFL  8951
             CQ FL
Sbjct  1246  CQAFL  1250


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             YLY D
Sbjct  53    YLYID  57


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  715  RSAKITL  735
            R A I L
Sbjct  303  RAARISL  309


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6530  VVSTQL  6547
             VV  QL
Sbjct  322   VVASQL  327


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  375   LQFAL  379


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4386  IMSTILS  4366
             I+S +LS
Sbjct  576   ILSAVLS  582


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7030  YSAWEG  7013
             YS W G
Sbjct  655   YSVWKG  660


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2284  KEKRQY  2301
             KE  QY
Sbjct  708   KENSQY  713


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2549  PVEA  2538
             PVEA
Sbjct  723   PVEA  726


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5460  FTIAI  5446
             FT AI
Sbjct  775   FTLAI  779


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  8681  PQIKDILSSL  8652
             PQ   I S L
Sbjct  792   PQFRSIVSAL  801


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2555  KGSPAIF  2575
             KG P I+
Sbjct  808   KGNPPIY  814


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1131  IILGLNKI  1154
             +IL LN I
Sbjct  1049  VILQLNSI  1056


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4040  IPAETGQETA  4069
             I AET  +TA
Sbjct  1132  ISAETRKQTA  1141


>sp|P20701.3|ITAL_HUMAN  RecName: Full=Integrin alpha-L; AltName: Full=Leukocyte adhesion 
glycoprotein LFA-1 alpha chain; Short=LFA-1A; AltName: Full=Leukocyte 
function-associated molecule 1 alpha chain; AltName: 
Full=CD11 antigen-like family member A; AltName: CD_antigen=CD11a; 
Flags: Precursor
Length=1170

 GENE ID: 3683 ITGAL | integrin, alpha L (antigen CD11A (p180), lymphocyte
function-associated antigen 1; alpha polypeptide) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2406  FFFFNPA  2386
             FFFF PA
Sbjct  17    FFFFAPA  23


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = -2

Query  8235  TAMAVALSKLTALFF  8191
             T MA AL  L   FF
Sbjct  7     TVMAMAL--LSGFFF  19


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 24/45 (53%)
 Frame = +2

Query  1541  QKLQGP*EKGLLEMWKGRTPNERLY*ETG*FFRE------DLAFL  1657
             Q LQGP       M  GR P           F E      DL FL
Sbjct  134   QNLQGP-------MLQGR-PG----------FQECIKGNVDLVFL  160


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3062  KDLIAEIQK  3088
             KDL  E QK
Sbjct  321   KDLFTELQK  329


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7536  INSSWG  7553
             +NSSWG
Sbjct  884   VNSSWG  889


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7302  LFSLCTTL  7279
             +FSLC  L
Sbjct  1048  MFSLCSSL  1055


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5095  QRIDGT  5112
             QRI+GT
Sbjct  567   QRIEGT  572


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6029  VNVTENFNMW  6058
             +NV  NF +W
Sbjct  725   INVSLNFSLW  734


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  958   SSLMVSFN  935
             SSL +SFN
Sbjct  1053  SSLSISFN  1060


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -2

Query  6633  SC-TIMVLAL  6607
             SC T+M +AL
Sbjct  4     SCITVMAMAL  13


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  412  FPPGL  398
            FPPGL
Sbjct  823  FPPGL  827


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +3

Query  5931  VHQMLKHM----IQ  5960
             +HQ  KHM    IQ
Sbjct  946   IHQV-KHMYQVRIQ  958


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2417  LLLIF  2403
             LLLIF
Sbjct  1104  LLLIF  1108


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  741  QNIQGQM  761
            QN QG M
Sbjct  134  QNLQGPM  140


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2862  SLTVQLSFS  2836
             SL V+LS S
Sbjct  800   SLSVELSLS  808


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  2746  RQKTS  2760
             RQKTS
Sbjct  414   RQKTS  418


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  4450  LLQGQQKSTL  4479
             L Q Q+ STL
Sbjct  926   LIQDQEDSTL  935


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  421  YFFFPP  404
            +FFF P
Sbjct  17   FFFFAP  22


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1212  FRDYVDR  1232
             F DYV R
Sbjct  208   FSDYVKR  214


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4409  ELQKQI  4426
             ELQK I
Sbjct  326   ELQKKI  331


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
 Frame = +2

Query  6521  IRPV-VSTQLLLNGSLAEEE  6577
             I P+ VS    LN SL EEE
Sbjct  722   ISPINVS----LNFSLWEEE  737


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  912  GHQAAMQML  938
            GH  A+QM+
Sbjct  871  GHSVALQMM  879


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 17/30 (56%)
 Frame = -1

Query  1180  MLVGLYILTILFNPRIIHLL*ISPTGIGGL  1091
             ML  LY+L                 GIGGL
Sbjct  1089  MLY-LYVLS----------------GIGGL  1101


 Score = 16.3 bits (31),  Expect(2) = 15030
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3336  HSGIQVACQ  3310
             HS I V C+
Sbjct  838   HSQIPVSCE  846


 Score = 15.9 bits (30),  Expect(2) = 15030
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3332  QESRWLANTLS  3300
             +ESR L   LS
Sbjct  850   EESRLLSRALS  860


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7382  TVQARQLLSG  7411
             TV A  LLSG
Sbjct  7     TVMAMALLSG  16


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8284  STSSLY  8267
             ST SLY
Sbjct  66    STGSLY  71


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = -2

Query  7890  LFT--------IESTAK  7864
             LFT        IE T K
Sbjct  323   LFTELQKKIYVIEGTSK  339


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 8/17 (47%)
 Frame = +1

Query  4666  TICM--------FQGKL  4692
             TIC         FQG L
Sbjct  651   TICFQIKSLIPQFQGRL  667


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 3/19 (15%)
 Frame = -2

Query  1932  FGFHLPG---KLISSNTVS  1885
             F FH P     LIS   VS
Sbjct  710   FSFHFPVCVQDLISPINVS  728


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2341  ENSRLL  2358
             E SRLL
Sbjct  850   EESRLL  855


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5865  SVALQ  5851
             SVALQ
Sbjct  873   SVALQ  877


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5269  CPSIPISF  5246
             C S  ISF
Sbjct  1052  CSSLSISF  1059


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3847  TSHCSPIT  3824
             T HC P+T
Sbjct  77    TGHCLPVT  84


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  682  SKQQLT  699
            SKQ LT
Sbjct  338  SKQDLT  343


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7397  QLLSGI  7414
             Q LSGI
Sbjct  573   QVLSGI  578


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7173  SDLEEE  7190
             S+LEE+
Sbjct  808   SNLEED  813


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1049  SCYVTSP  1029
             SC V SP
Sbjct  860   SCNVSSP  866


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1783  SSLSI  1769
             SSLSI
Sbjct  1053  SSLSI  1057


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1626  PVSQYNL  1606
             P S YNL
Sbjct  22    PASSYNL  28


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  2169  GHCL  2158
             GHCL
Sbjct  78    GHCL  81


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7655  SRSCD  7641
             SR CD
Sbjct  116   SRTCD  120


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1951  SNSPYHF  1931
             SN  Y+F
Sbjct  187   SNTSYQF  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  6155  LKCTDLKNDT  6184
             LK  DL +DT
Sbjct  380   LK-ADLQDDT  388


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5862  QKNCG  5876
             +KNCG
Sbjct  768   EKNCG  772


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5467  NTFYNSNW  5444
             NT  NS W
Sbjct  881   NTLVNSSW  888


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 3/20 (15%)
 Frame = -2

Query  2706  SSIFVLCCPISKSDPTYKSS  2647
             SS F LC   S S   + SS
Sbjct  1046  SSMFSLCSSLSIS---FNSS  1062


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4586  YGKQM  4600
             Y KQM
Sbjct  1085  YEKQM  1089


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5068  GFIFF  5054
             GF FF
Sbjct  16    GFFFF  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = -3

Query  2384  DVVFLIELPRSL---EF  2343
             D VFL +   SL   EF
Sbjct  156   DLVFLFDGSMSLQPDEF  172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  4646  MEKFSKTPY  4672
             M K S T Y
Sbjct  183   MKKLSNTSY  191


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6600  KLTDLIT  6580
             KL DL T
Sbjct  319   KLKDLFT  325


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5830  HGAPSPPPS  5804
             HG  SP PS
Sbjct  558   HGGLSPQPS  566


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1175  GRAIH  1161
             GR IH
Sbjct  582   GRSIH  586


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  825  FSPEVIP  845
            FSP  IP
Sbjct  624  FSPAEIP  630


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -1

Query  5974  NIMYLCIICFSI  5939
             NI     ICF I
Sbjct  649   NI----TICFQI  656


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1038  DIAGTTS  1058
             +IA TTS
Sbjct  698   NIAVTTS  704


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1118  NFSYWD  1101
             NFS W+
Sbjct  730   NFSLWE  735


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4134  ISPVLR  4151
             I P+LR
Sbjct  750   IPPILR  755


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6404  PIPIHY  6421
             P+P HY
Sbjct  995   PVPCHY  1000


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4266  CPIIF  4252
             CP++F
Sbjct  1021  CPVVF  1025


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3951  PGLQSTC  3931
             PGL  TC
Sbjct  113   PGLSRTC  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  864  EGATPQDL  887
            EG   QDL
Sbjct  335  EGTSKQDL  342


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/18 (38%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +3

Query  702  GHSNQVSQNYPIVQNIQG  755
            GH  QV       Q I+G
Sbjct  443  GHWSQV-------QTIHG  453


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8658  FFGSEL  8641
             +FG EL
Sbjct  459   YFGGEL  464


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3813  RNITV  3827
             RNI V
Sbjct  697   RNIAV  701


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2628  MSGFCFL  2608
             +SG C+L
Sbjct  125   LSGLCYL  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1680  LQSRP  1694
             LQ RP
Sbjct  141   LQGRP  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8547  PVTPQV  8564
             P TP+V
Sbjct  394   PLTPEV  399


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4981  GVNIKQD  5001
             GV++ QD
Sbjct  466   GVDVDQD  472


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4693  GDGFIDI  4713
             GDG +D+
Sbjct  533   GDGLVDV  539


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  4068  AVSCPVSAGI  4039
             A SC VS  I
Sbjct  858   ALSCNVSSPI  867


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2253  SGPIF  2239
             S PIF
Sbjct  864   SSPIF  868


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  5734  IDRLIERAEDS  5766
             I+ LI+  EDS
Sbjct  923   INILIQDQEDS  933


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  618   LSLSFD  601
             LS SF+
Sbjct  1055  LSISFN  1060


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  194   RDLKAK  211
             R+LK K
Sbjct  1119  RNLKEK  1124


>gb|AAY57097.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=116


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = -1

Query  6730  YCNKC------SPWSSLDTD  6689
             YC KC      S W  L+ D
Sbjct  91    YCAKCAKVGYSSGWPTLESD  110


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  65    TISRDNSKN  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  8364  SSVIGWPT  8387
             SS  GWPT
Sbjct  101   SS--GWPT  106


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  66    ISRDNSKNTL  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/12 (41%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  3818  YHSNWRAMASDF  3853
             Y S W  + SD+
Sbjct  100   YSSGWPTLESDY  111


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  18    CAASGF  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  82    LRAE  85


>gb|AAY57063.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=115


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSYYWMSWVR  38


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  4828  WVRESP*NGGK  4860
             WVR+SP   GK
Sbjct  36    WVRQSP---GK  43


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  945  TINEE  959
            TINE+
Sbjct  50   TINED  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + P KG+E
Sbjct  39    QSPGKGLE  46


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1215  RDYVD  1229
             R YVD
Sbjct  58    RSYVD  62


>gb|AAY33401.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=111


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  52   DVSNRPSGVSNR  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  42    PGK---------APKLMIYDVSNRPSGVSNRFS  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


>gb|AAY33404.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=107


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5449  NWYKQ  5435
             NWYKQ
Sbjct  34    NWYKQ  38


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG  PED
Sbjct  74    TISGLQPED  82


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8745  YPLTFG  8762
             YPL FG
Sbjct  94    YPLNFG  99


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  1257  QASQEVK---NW  1283
             QASQ++    NW
Sbjct  24    QASQDISNYLNW  35


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2886  NFPTNFC  2866
             +F T FC
Sbjct  82    DFATYFC  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  40   PGEAPKLL  47


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 8/19 (42%), Positives = 8/19 (42%), Gaps = 9/19 (47%)
 Frame = -2

Query  2160  LTFGPSIPGFNFTGT-VSI  2107
             L FGP        GT V I
Sbjct  96    LNFGP--------GTKVNI  106


>gb|AAY33444.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 10/31 (32%)
 Frame = +2

Query  7013  TLPCRIKQII---NM-W--QKVGKA----MY  7075
             TL CR  QI+    + W  QK G A    MY
Sbjct  20    TLSCRASQIVPRDHLTWYQQKPGQAPRVLMY  50


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  8065  LQLPPLERLTLDC  8103
             L L P ER TL C
Sbjct  11    LSLSPGERATLSC  23


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4436  QNFRVYY  4456
             ++F VYY
Sbjct  82    EDFAVYY  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  6984  QITLKEVTQSP  7016
             +I L   TQSP
Sbjct  1     EIVL---TQSP  8


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  2350  RLL--GSSIR  2373
             R L  G SIR
Sbjct  46    RVLMYGTSIR  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1609  IVLRDRL  1629
             IV RD L
Sbjct  28    IVPRDHL  34


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  706  TAIRSA  723
            T IR A
Sbjct  52   TSIRAA  57


>gb|AAY33230.1|  anti-rabies virus immunoglobulin heavy chain variable region 
[Homo sapiens]
Length=126


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5464  TFYNSNWY  5441
             T+Y S WY
Sbjct  53    TYYKSKWY  60


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             W+R+SP
Sbjct  38    WIRQSP  43


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +2

Query  1001  YCTRPDERT  1027
             YC R D RT
Sbjct  98    YCARAD-RT  105


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4275  SLTCPI  4258
             SLTC I
Sbjct  19    SLTCAI  24


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +2

Query  350  VSIKRGRI  373
            VS+KR RI
Sbjct  65   VSVKR-RI  71


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8168  LQYWSQ  8185
             L YW Q
Sbjct  113   LDYWGQ  118


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1905  ISSNTVSS  1882
             IS + VSS
Sbjct  24    ISGDSVSS  31


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/7 (42%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3384  SNWYHNF  3364
             S WY ++
Sbjct  57    SKWYNDY  63


 Score = 15.9 bits (30),  Expect(2) = 44263
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2902  LTCPI  2888
             LTC I
Sbjct  20    LTCAI  24


 Score = 15.9 bits (30),  Expect(2) = 44263
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + PS G+E
Sbjct  41    QSPSRGLE  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TIN    KN
Sbjct  72    TINPDTSKN  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3833  RAMASD  3850
             R M SD
Sbjct  104   RTMTSD  109


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1905  ISSNT  1891
             +SSNT
Sbjct  29    VSSNT  33


>gb|AAY33231.1|  anti-rabies virus immunoglobulin heavy chain variable region 
[Homo sapiens]
 gb|AAY33267.1|  anti-rabies virus immunoglobulin heavy chain variable region 
[Homo sapiens]
Length=126


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5464  TFYNSNWY  5441
             T+Y S WY
Sbjct  53    TYYKSKWY  60


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             W+R+SP
Sbjct  38    WIRQSP  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4275  SLTCPI  4258
             SLTC I
Sbjct  19    SLTCAI  24


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8168  LQYWSQ  8185
             L YW Q
Sbjct  113   LDYWGQ  118


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1905  ISSNTVSS  1882
             IS + VSS
Sbjct  24    ISGDSVSS  31


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/7 (42%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3384  SNWYHNF  3364
             S WY ++
Sbjct  57    SKWYNDY  63


 Score = 15.9 bits (30),  Expect(2) = 44263
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2902  LTCPI  2888
             LTC I
Sbjct  20    LTCAI  24


 Score = 15.9 bits (30),  Expect(2) = 44263
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + PS G+E
Sbjct  41    QSPSRGLE  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TIN    KN
Sbjct  72    TINPDTSKN  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3833  RAMASD  3850
             R M SD
Sbjct  104   RTMTSD  109


>gb|AAY33229.1|  anti-rabies virus immunoglobulin heavy chain variable region 
[Homo sapiens]
Length=126


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5464  TFYNSNWY  5441
             T+Y S WY
Sbjct  53    TYYKSKWY  60


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  4828  WVRESP  4845
             W+R+SP
Sbjct  38    WIRQSP  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4275  SLTCPI  4258
             SLTC I
Sbjct  19    SLTCAI  24


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8168  LQYWSQ  8185
             L YW Q
Sbjct  113   LDYWGQ  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/7 (42%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3384  SNWYHNF  3364
             S WY ++
Sbjct  57    SKWYNDY  63


 Score = 15.9 bits (30),  Expect(2) = 44263
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2902  LTCPI  2888
             LTC I
Sbjct  20    LTCAI  24


 Score = 15.9 bits (30),  Expect(2) = 44263
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + PS G+E
Sbjct  41    QSPSRGLE  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TIN    KN
Sbjct  72    TINPDTSKN  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3833  RAMASD  3850
             R M SD
Sbjct  104   RTMTSD  109


>gb|AAY16635.1|  immunoglobulin kappa light chain [Homo sapiens]
Length=127


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 18/46 (39%)
 Frame = +2

Query  6992  TEGSDTI--------TLPCRIKQII---NM-W--QKVGKA----MY  7075
             T+  DT         TL CR  Q I   N+ W  QK G A    MY
Sbjct  5     TQSPDTLSLSPGERATLSCRASQSIGSNNLAWYQQKPGQAPRLLMY  50


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  8065  LQLPPLERLTLDC  8103
             L L P ER TL C
Sbjct  11    LSLSPGERATLSC  23


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4436  QNFRVYY  4456
             ++F VYY
Sbjct  82    EDFAVYY  88


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6814  IKRTI  6828
             IKRT+
Sbjct  115   IKRTV  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4775  IGNNN  4789
             IG NN
Sbjct  29    IGSNN  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3997  GSSSCSQ  4017
             GSS C Q
Sbjct  93    GSSPCQQ  99


>gb|AAW65982.1|  CXORF15 [Homo sapiens]
Length=396

 GENE ID: 55787 TXLNG | taxilin gamma [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 14/34 (41%), Positives = 15/34 (44%), Gaps = 11/34 (32%)
 Frame = +2

Query  2705  ELRQHL----LRWGLTT-----PDKKHQKEPPFL  2779
             EL Q+L    L    TT      D KHQ E  FL
Sbjct  166   ELQQQLVDAKLQ--QTTQLIKEADEKHQREREFL  197


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  3144  KQENMQE  3164
             K+ENMQ+
Sbjct  91    KEENMQQ  97


 Score = 18.5 bits (36),  Expect(2) =  3055
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +2

Query  4406  KELQKQI--TKIQ  4438
             KELQ Q    K Q
Sbjct  165   KELQQQLVDAKLQ  177


 Score = 18.0 bits (35),  Expect(2) =  3055
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 4/16 (25%)
 Frame = +2

Query  4247  LKKIIGQ--VRDQAEH  4288
             LKK I Q   R+  EH
Sbjct  144   LKKLIEQYALRE--EH  157


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4810  EKETGIW  4830
             EKET IW
Sbjct  261   EKETIIW  267


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6984  QITLKEV  7004
             QITL E+
Sbjct  113   QITLNEI  119


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8517  EAQEEEE  8537
             +A EEEE
Sbjct  97    QAREEEE  103


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/34 (29%), Positives = 12/34 (35%), Gaps = 16/34 (47%)
 Frame = +2

Query  5105  MEQAPEDQGPQREPHNEWTLELLEELKNEAVRHF  5206
             M+QA E+                EE   EA  HF
Sbjct  95    MQQAREE----------------EERRKEATAHF  112


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3380  LEKEPIV  3400
             LEKE I+
Sbjct  260   LEKETII  266


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6767  ISRAKWNN  6790
             I R KW N
Sbjct  266   IWRTKWEN  273


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3017  EILKEPV  3037
             E+LKE V
Sbjct  321   EVLKEQV  327


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8436  AASRDL  8453
             AA RDL
Sbjct  335   AANRDL  340


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6993  LKEVTQS  7013
             LKE T+S
Sbjct  198   LKEATES  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  2573  FQSSMTK  2593
             FQ  M K
Sbjct  232   FQTTMAK  238


 Score = 16.8 bits (32),  Expect(2) = 23249
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2343  ELKTSGK  2363
             EL TS K
Sbjct  356   ELNTSSK  362


 Score = 15.5 bits (29),  Expect(2) = 23249
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2374  NTTSRR  2391
             NT S R
Sbjct  358   NTSSKR  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  2328  ENLIREL----KT  2354
             E L REL    KT
Sbjct  77    ESLCRELQRHNKT  89


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1526  RRAHSQKLQ  1552
             RR   QKL+
Sbjct  28    RRSPRQKLE  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  450  RELER  464
            REL+R
Sbjct  81   RELQR  85


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5557  SDELF  5543
             S+ELF
Sbjct  239   SNELF  243


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  5581  EKLDES  5564
             +KL+ES
Sbjct  33    QKLEES  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  5756  QKTVAMRVKEK  5788
             QK  A  VKEK
Sbjct  49    QKKQAQIVKEK  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6743  NMRQA  6757
             NM QA
Sbjct  94    NMQQA  98


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2852  TVNDIQ  2869
             T N+IQ
Sbjct  115   TLNEIQ  120


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2180  EKIKALVE  2203
             EK K L+E
Sbjct  142   EKLKKLIE  149


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = +2

Query  4229  ESMNKELKK-----II  4261
             E M K  KK     II
Sbjct  251   EKMTKKIKKLEKETII  266


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1565  KGLLEM  1582
             K LL+M
Sbjct  276   KALLQM  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6865  RRGPR  6879
             RR PR
Sbjct  28    RRSPR  32


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  954  EEAAE  968
            EEA E
Sbjct  17   EEATE  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6785  NNTLKQ  6802
             N TLK+
Sbjct  87    NKTLKE  92


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6833  FQIVL  6819
             FQI L
Sbjct  112   FQITL  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3717  ELEEMNK  3737
             E+E M K
Sbjct  249   EMEKMTK  255


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1266  VKLARL  1249
             +KL RL
Sbjct  297   IKLERL  302


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 8/19 (42%)
 Frame = +3

Query  504  CRQILGQLQPSLQTGSEEL  560
            CR         LQT   EL
Sbjct  306  CR--------ALQTERNEL  316


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3304  RVLASHLD  3327
             R L  HL+
Sbjct  363   RALGAHLE  370


>ref|NP_004834.1|  interleukin-27 receptor subunit alpha precursor [Homo sapiens]
 sp|Q6UWB1.2|I27RA_HUMAN  RecName: Full=Interleukin-27 receptor subunit alpha; Short=IL-27 
receptor subunit alpha; Short=IL-27R subunit alpha; Short=IL-27R-alpha; 
Short=IL-27RA; AltName: Full=WSX-1; AltName: 
Full=Type I T-cell cytokine receptor; Short=TCCR; AltName: 
Full=Cytokine receptor-like 1; AltName: Full=ZcytoR1; Flags: 
Precursor
Length=636

 GENE ID: 9466 IL27RA | interleukin 27 receptor, alpha [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5105  MEQAPEDQ  5128
             MEQ PE Q
Sbjct  571   MEQVPEAQ  578


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  963  AEWDRVHPVHA  995
            AEW RV  V A
Sbjct  293  AEWARVSAVNA  303


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  1514  ETLNNLSLV  1488
             E L NLSLV
Sbjct  307   EPLTNLSLV  315


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6361  HLSHYT  6378
             HL HYT
Sbjct  448   HLTHYT  453


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9026  PAQATPP  9006
             PAQAT P
Sbjct  602   PAQATAP  608


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1634  FREDLA  1651
             FRE+LA
Sbjct  410   FREELA  415


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4848  LWRLPD  4831
             LWRL D
Sbjct  422   LWRLQD  427


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 12/31 (38%)
 Frame = -2

Query  4095  LPANFKRKYAVSCP-------VSA-GITSAS  4027
             LP NF     V  P       VSA G  SAS
Sbjct  379   LPGNF----TVGVPYRITVTAVSASGLASAS  405


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5812  PPSPQV  5795
             PP PQV
Sbjct  629   PPRPQV  634


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  5368  EQEMEPVDPRLEP  5406
             E +M P  PRL P
Sbjct  123   ETQMKPNAPRLGP  135


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8962  DIELAT  8979
             D ELAT
Sbjct  195   DLELAT  200


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3753  LTNLS  3739
             LTNLS
Sbjct  309   LTNLS  313


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6365  RCYNL  6351
             RCY L
Sbjct  541   RCYHL  545


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8459  TWSNHK  8476
             TW  HK
Sbjct  155   TWPSHK  160


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5870  LWVT  5881
             LWVT
Sbjct  487   LWVT  490


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  334  RWVRE  348
            RWV E
Sbjct  552  RWVWE  556


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  6614  KTIIVQLNTSVEI  6652
             KTI   L T VEI
Sbjct  184   KTI--PL-TPVEI  193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4475  LWKGP  4489
             LWK P
Sbjct  254   LWKAP  258


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  8951  EVLRMQLSGH  8922
             EV R QL GH
Sbjct  439   EVPRHQLRGH  448


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +1

Query  8152  IL----VESPTVLES  8184
             IL     E P V+ES
Sbjct  585   ILEVEEMEPPPVMES  599


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             E EEM
Sbjct  587   EVEEM  591


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4201  LQSPKSRS  4224
             LQS K RS
Sbjct  68    LQSQKYRS  75


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  956  GSCRM  970
            G CRM
Sbjct  206  GRCRM  210


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  224  PLVSLSL  204
            PL  LSL
Sbjct  308  PLTNLSL  314


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  5942  HLMHKIEWWLLP  5907
             HL HK+    LP
Sbjct  544   HLRHKV----LP  551


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6191  NSSSG  6205
             NSSSG
Sbjct  563   NSSSG  567


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             LPL+ VL
Sbjct  20    LPLLWVL  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1284  MTETLLV  1304
             M + LLV
Sbjct  99    MSDKLLV  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7341  EQQEALW  7361
             E +E LW
Sbjct  211   EKEEDLW  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5223  WSQIL  5209
             WS IL
Sbjct  220   WSPIL  224


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7002  LPSVLF  6985
             LP +LF
Sbjct  518   LPGILF  523


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218  PEEL  229
            PEEL
Sbjct  621  PEEL  624


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  447  LPILYVL  427
            LP L VL
Sbjct  20   LPLLWVL  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3812  EKYHSN  3829
             +KY SN
Sbjct  71    QKYRSN  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  8901  CQTSTLTLLSP  8869
             CQ    TLL P
Sbjct  171   CQEAAWTLLEP  181


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5834  GAWCPI  5817
             G W PI
Sbjct  218   GEWSPI  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8966  SSLLQGTF  8989
             S LL G F
Sbjct  376   SALLPGNF  383


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4527  YKIIVT  4544
             Y I VT
Sbjct  389   YRITVT  394


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7558  PNPQEL  7541
             P P+EL
Sbjct  619   PTPEEL  624


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7174  EDLGL  7160
             E+LGL
Sbjct  622   EELGL  626


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  301  WRTHQSPP  278
            WR +  PP
Sbjct  423  WRLQDAPP  430


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -2

Query  2517  PGV----SLFILG  2491
             PG+     LF LG
Sbjct  519   PGILFLWGLFLLG  531


>ref|NP_068818.4|  major histocompatibility complex, class II, DR beta 4 precursor 
[Homo sapiens]
Length=266

 GENE ID: 3126 HLA-DRB4 | major histocompatibility complex, class II, DR beta 4
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  227   KMLSGVGGFV  236


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  3080  IQKQGQGQWTYQ  3115
             IQ    G WT+Q
Sbjct  177   IQN---GDWTFQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  228   MLSGVG  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +3

Query  852  SALSEGATPQDLNTMLNTVGG  914
            SA SE A  Q    ML  VGG
Sbjct  218  SARSESA--Q--SKMLSGVGG  234


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5306  LFIHFQN  5326
             LFI F N
Sbjct  246   LFIYFRN  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = -2

Query  4188  SCLIPAHQQAALTV  4147
             SC+      AALTV
Sbjct  10    SCM------AALTV  17


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/27 (25%), Positives = 11/27 (40%), Gaps = 9/27 (33%)
 Frame = +2

Query  3776  FLDGIDKA---------QDEHEKYHSN  3829
             FL+G +           Q+E   Y S+
Sbjct  46    FLNGTERVWNLIRYIYNQEEYARYNSD  72


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2035  YTCQ  2046
             YTCQ
Sbjct  200   YTCQ  203


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  5949  ALASDAQNR  5923
             ALA D Q R
Sbjct  27    ALAGDTQPR  35


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1026  VLSSGLVQ  1003
             V S GL+Q
Sbjct  171   VVSTGLIQ  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1482  FRNQ  1493
             FRNQ
Sbjct  250   FRNQ  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T + LV+LE
Sbjct  183   TFQTLVMLE  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGL +
Sbjct  235   FVLGLLF  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4930  FQTL  4941
             FQTL
Sbjct  184   FQTL  187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3138  FLNG  3127
             FLNG
Sbjct  46    FLNG  49


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  87    AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  87  AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  894  MLNTV  908
            ML TV
Sbjct  189  MLETV  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2725  EVGTY  2739
             EV TY
Sbjct  103   EVDTY  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2522  RYQYNV  2539
             RY Y V
Sbjct  109   RYNYGV  114


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QR V
Sbjct  119   TVQRRV  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             +Y C V H
Sbjct  199   VYTCQVEH  206


>ref|NP_871714.1|  leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 
2 [Homo sapiens]
Length=287

 GENE ID: 353514 LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 5 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  6646  YRCVQLYYY  6620
             YRC   YYY
Sbjct  102   YRC---YYY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5404  PWKHPGSQ  5427
             PW HP  Q
Sbjct  3     PWSHPSAQ  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9040  EPSDP  9054
             EPSDP
Sbjct  114   EPSDP  118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1571  ALFPRGP  1551
             ALFP GP
Sbjct  185   ALFPVGP  191


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 18/31 (58%)
 Frame = +2

Query  5273  VEAIIR------------ILQQLLFIHFQNW  5329
             VE  IR            IL     I FQ+W
Sbjct  251   VENLIRMGMAGLILVVLGIL-----I-FQDW  275


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7356  LWAQP  7370
             LWA+P
Sbjct  37    LWAEP  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 6/27 (22%)
 Frame = +2

Query  2483  FTIPSINNETPGIRYQ---YNVLPQGW  2554
             F IPS      G RY    Y   P GW
Sbjct  89    FSIPSMTEHHAG-RYRCYYYS--PAGW  112


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             S LPSP
Sbjct  133   SALPSP  138


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2576  GILLVILSI  2550
             G  LV+L I
Sbjct  261   GLILVVLGI  269


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  139  DPSDP  153
            +PSDP
Sbjct  114  EPSDP  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  1035  SDIAGTTSTLQE  1070
             SD  GT S LQ+
Sbjct  238   SD-SGTASHLQD  248


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -3

Query  9110  QIWSNQRDPVQA  9075
             Q W  QR P QA
Sbjct  273   QDWHSQRSP-QA  283


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8915  SSRGPRAASG  8944
             S R P AA G
Sbjct  277   SQRSPQAAAG  286


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3874  CYY  3866
             CYY
Sbjct  104   CYY  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -3

Query  6365  RCYNLSTYS---W  6336
             RCY    YS   W
Sbjct  103   RCYY---YSPAGW  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5543  EELIR  5557
             E LIR
Sbjct  252   ENLIR  256


>ref|NP_870994.1|  leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 
3 [Homo sapiens]
Length=265

 GENE ID: 353514 LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 5 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  6646  YRCVQLYYY  6620
             YRC   YYY
Sbjct  114   YRC---YYY  119


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5404  PWKHPGSQ  5427
             PW HP  Q
Sbjct  3     PWSHPSAQ  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7587  LLCLGM  7604
             LLCLG+
Sbjct  26    LLCLGL  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9040  EPSDP  9054
             EPSDP
Sbjct  126   EPSDP  130


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1571  ALFPRGP  1551
             ALFP GP
Sbjct  197   ALFPVGP  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7356  LWAQP  7370
             LWA+P
Sbjct  49    LWAEP  53


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 6/27 (22%)
 Frame = +2

Query  2483  FTIPSINNETPGIRYQ---YNVLPQGW  2554
             F IPS      G RY    Y   P GW
Sbjct  101   FSIPSMTEHHAG-RYRCYYYS--PAGW  124


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6639  VFSCTI  6622
             VFS TI
Sbjct  243   VFSSTI  248


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             S LPSP
Sbjct  145   SALPSP  150


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  139  DPSDP  153
            +PSDP
Sbjct  126  EPSDP  130


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5769  ATVFCS  5752
             ATVF S
Sbjct  241   ATVFSS  246


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  6925  TVEKFPSTI  6899
             TV  F STI
Sbjct  242   TV--FSSTI  248


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3874  CYY  3866
             CYY
Sbjct  116   CYY  118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -3

Query  6365  RCYNLSTYS---W  6336
             RCY    YS   W
Sbjct  115   RCYY---YSPAGW  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2206  LYRDG  2220
             LYR G
Sbjct  258   LYRQG  262


>ref|NP_005186.2|  CCAAT/enhancer-binding protein delta [Homo sapiens]
 sp|P49716.2|CEBPD_HUMAN  RecName: Full=CCAAT/enhancer-binding protein delta; Short=C/EBP 
delta; AltName: Full=Nuclear factor NF-IL6-beta; Short=NF-IL6-beta
Length=269

 GENE ID: 1052 CEBPD | CCAAT/enhancer binding protein (C/EBP), delta
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5358  RQRRARN  5378
             RQRR RN
Sbjct  195   RQRRERN  201


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  284  AAPRLL  267
            AAPRLL
Sbjct  114  AAPRLL  119


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  5827  GAPSPPPSPQ  5798
             G P PP SP+
Sbjct  153   GQPTPPTSPE  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
 Frame = +3

Query  6462  RRS--MEQDHVQMSAQ  6503
             RR   M+Q  V++SA+
Sbjct  214   RRNQEMQQKLVELSAE  229


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5560  CSDELF  5543
             C DELF
Sbjct  77    CHDELF  82


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7305  ALFSL  7291
             ALFSL
Sbjct  4     ALFSL  8


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  600  HQRIE  614
            HQR+E
Sbjct  234  HQRVE  238


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8041  GRSAEP  8058
             GR AEP
Sbjct  34    GRGAEP  39


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -3

Query  8969  SMSAV--LE  8949
             SM AV  LE
Sbjct  67    SMAAVPTLE  75


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  3635  ESELVNQIIEQL  3670
             E E   Q +EQL
Sbjct  229   ENEKLHQRVEQL  240


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  4113  YILTMAAISPVL  4148
             YI  MAA+ P L
Sbjct  64    YIDSMAAV-PTL  74


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             P+P RSS
Sbjct  161   PEPPRSS  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  7285  GAERKKSSGNR  7317
             G  R KS G R
Sbjct  175   GPAREKSAGKR  185


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  409  ERKNI  423
            ER NI
Sbjct  199  ERNNI  203


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 12/38 (31%)
 Frame = -1

Query  7474  ELQQMLLRLNSP----QQIV--LLLHYTRQ*LSGLYRQ  7379
             E+QQ L  L       +Q V  L    TR  L GL RQ
Sbjct  218   EMQQKLVELSAENEKLHQRVEQL----TRD-LAGL-RQ  249


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6938  LFNS  6949
             LFNS
Sbjct  85    LFNS  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  716  GQPKLPYSAEHP  751
            GQP  P S E P
Sbjct  153  GQPTPPTSPEPP  164


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  1408  WPGPPTP  1388
             WP  P P
Sbjct  17    WPAEPAP  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  688  QQLTQD  705
            +QLT D
Sbjct  238  EQLTRD  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  9035  LPSP  9024
             LPSP
Sbjct  254   LPSP  257


>ref|NP_871715.1|  leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 
4 [Homo sapiens]
Length=253

 GENE ID: 353514 LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 5 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  6646  YRCVQLYYY  6620
             YRC   YYY
Sbjct  102   YRC---YYY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5404  PWKHPGSQ  5427
             PW HP  Q
Sbjct  3     PWSHPSAQ  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9040  EPSDP  9054
             EPSDP
Sbjct  114   EPSDP  118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1571  ALFPRGP  1551
             ALFP GP
Sbjct  185   ALFPVGP  191


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7356  LWAQP  7370
             LWA+P
Sbjct  37    LWAEP  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 6/27 (22%)
 Frame = +2

Query  2483  FTIPSINNETPGIRYQ---YNVLPQGW  2554
             F IPS      G RY    Y   P GW
Sbjct  89    FSIPSMTEHHAG-RYRCYYYS--PAGW  112


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6639  VFSCTI  6622
             VFS TI
Sbjct  231   VFSSTI  236


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             S LPSP
Sbjct  133   SALPSP  138


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  139  DPSDP  153
            +PSDP
Sbjct  114  EPSDP  118


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5769  ATVFCS  5752
             ATVF S
Sbjct  229   ATVFSS  234


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  6925  TVEKFPSTI  6899
             TV  F STI
Sbjct  230   TV--FSSTI  236


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3874  CYY  3866
             CYY
Sbjct  104   CYY  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -3

Query  6365  RCYNLSTYS---W  6336
             RCY    YS   W
Sbjct  103   RCYY---YSPAGW  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2206  LYRDG  2220
             LYR G
Sbjct  246   LYRQG  250


>ref|NP_112218.2|  toll-like receptor 10 precursor [Homo sapiens]
 ref|NP_001017388.1|  toll-like receptor 10 precursor [Homo sapiens]
 sp|Q9BXR5.2|TLR10_HUMAN  RecName: Full=Toll-like receptor 10; AltName: CD_antigen=CD290; 
Flags: Precursor
Length=811

 GENE ID: 81793 TLR10 | toll-like receptor 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -1

Query  1852  LPPYLYCDEGSLP  1814
             LP Y   +EGSLP
Sbjct  177   LPHY---EEGSLP  186


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  6401  EPIPIHYCAP  6430
             EPIP  YC P
Sbjct  731   EPIPF-YCIP  739


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8033  LIWDDL  8050
             L WDDL
Sbjct  254   LLWDDL  259


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = +3

Query  1257  QASQEVKNWMTETLLVQNA--NP  1319
             Q  QEVK     TL   NA  NP
Sbjct  509   QSCQEVK-----TL---NAGRNP  523


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -2

Query  1917  PGKLISSNTVS  1885
             PGK IS N VS
Sbjct  674   PGKSISENIVS  684


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -1

Query  6040  CHIYQYYF  6017
             CH Y++YF
Sbjct  706   CH-YEFYF  712


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  5273  LLPKYPHKFH  5244
             L P YP KF+
Sbjct  342   LFPNYPTKFQ  351


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/34 (32%), Positives = 12/34 (35%), Gaps = 20/34 (58%)
 Frame = -3

Query  2456  LRELKNMHHPHPVLLLI-FSFLTLRDVVFLIELP  2358
             LREL            I F FLT        +LP
Sbjct  468   LRELN-----------IAFNFLT--------DLP  482


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7782  FHKLAHL  7762
             F+K AHL
Sbjct  159   FQKIAHL  165


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3103  MDISNL  3120
             MDI NL
Sbjct  326   MDIENL  331


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4383  MSTILSPAL  4357
             M  ILSP L
Sbjct  497   MNFILSPSL  505


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +2

Query  3047  YYDPSKDLIAE-----IQK  3088
             Y+DP K  I E     I+K
Sbjct  671   YFDPGKS-ISENIVSFIEK  688


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  9074  LPVLGLSG  9097
             L +LGLSG
Sbjct  144   LEILGLSG  151


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4442  FRVYY  4456
             FRV+Y
Sbjct  309   FRVFY  313


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -3

Query  4493  LLVLS-KVDFCC  4461
             +LVL   V FCC
Sbjct  587   MLVLGLAVAFCC  598


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4267  LSYNFL  4250
             LSYN L
Sbjct  55    LSYNLL  60


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7684  HKLNTLL  7704
             HKL  LL
Sbjct  743   HKLKALL  749


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  4563  EKQRSLGIMEN  4595
             E QR L  +EN
Sbjct  232   EMQRNLS-LEN  241


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 18/33 (54%)
 Frame = +2

Query  6605  DNAKTIIVQLN------------------TSVE  6649
             +NAKT +  LN                  TSVE
Sbjct  240   ENAKTSVLLLNKVDLLWDDLFLILQFVWHTSVE  272


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4490  LVLSKVD  4470
             L L KVD
Sbjct  247   LLLNKVD  253


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  3053  HNTLH------VLVLLE  3021
             HN  H      +L+LLE
Sbjct  715   HNLFHENSDHIILILLE  731


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2539  HIVLI  2525
             HI+LI
Sbjct  724   HIILI  728


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1368  EMMTAC  1385
             E+MT C
Sbjct  29    ELMTNC  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6840  LLFPN  6826
             +LFPN
Sbjct  341   MLFPN  345


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2886  NFPTNF  2869
             N+PT F
Sbjct  345   NYPTKF  350


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3683  KVYLAW  3700
             K YL W
Sbjct  752   KAYLEW  757


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -2

Query  984  DALYPILQLPH*WSLLTFAW  925
            D L+ ILQ         F W
Sbjct  257  DDLFLILQ---------FVW  267


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7668  EKLTITQA  7691
             E LTI  A
Sbjct  329   ENLTISNA  336


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1777  LSIGSCF  1757
             LS  SCF
Sbjct  387   LSLVSCF  393


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2183  KIKALVE  2203
             K KAL E
Sbjct  744   KLKALLE  750


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8033  LIWDDLR  8053
             L W +LR
Sbjct  766   LFWANLR  772


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6078  CSTMS  6064
             CS MS
Sbjct  34    CSNMS  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3818  ISHVHL  3801
             I H HL
Sbjct  162   IAHLHL  167


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5543  EELIRTVR  5566
             E+L R VR
Sbjct  626   EQLKRNVR  633


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = +2

Query  5465  VAFIAK-----FV  5488
             V FI K     FV
Sbjct  683   VSFIEKSYKSIFV  695


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2034  LHLST  2048
             LHL T
Sbjct  165   LHLNT  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6584  IRSVNF  6601
             IR V F
Sbjct  276   IRNVTF  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2890  IQFPH  2876
             IQ PH
Sbjct  369   IQLPH  373


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  8068  QLPPLERLTLD  8100
             QLP L  L L+
Sbjct  370   QLPHLKTLILN  380


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2606  KALRFL  2589
             K LR+L
Sbjct  96    KELRYL  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1898  EEMSLP  1915
             EE SLP
Sbjct  181   EEGSLP  186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2310  LHLVL  2296
             LH VL
Sbjct  193   LHIVL  197


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7900  LPNSIH  7883
             LP SI+
Sbjct  441   LPKSIQ  446


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4753  CTSEL  4739
             CT EL
Sbjct  526   CTCEL  530


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             HL EL
Sbjct  568   HLHEL  572


>sp|Q13586.3|STIM1_HUMAN  RecName: Full=Stromal interaction molecule 1; Flags: Precursor
Length=685

 GENE ID: 6786 STIM1 | stromal interaction molecule 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8939  MQLSGHVM  8916
             +QLSGH M
Sbjct  157   LQLSGHAM  164


 Score = 22.7 bits (46),  Expect =   545
 Identities = 11/32 (34%), Positives = 15/32 (46%), Gaps = 11/32 (34%)
 Frame = +2

Query  6005  PNPQEVVLVNVTENFNMWKNDMVEQMHEDIIS  6100
             PNP           F M  +D V+ M E+I+S
Sbjct  466   PNP---------AHFIM-TDD-VDDMDEEIVS  486


 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  5149  VWLPLWPLVFWGL  5111
             V L LW L  WGL
Sbjct  5     VRLALWLL--WGL  15


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1529  RAHSQKLQ  1552
             R H QKLQ
Sbjct  184   RSHRQKLQ  191


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = +2

Query  3794  KAQDEH-----EKYH  3823
             KAQ+EH     EK H
Sbjct  267   KAQEEHRTVEVEKVH  281


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/23 (39%), Positives = 10/23 (43%), Gaps = 8/23 (34%)
 Frame = +1

Query  3358  LSEIMVPVRERTHSRSRNLLCRW  3426
             LSE+    RER H        RW
Sbjct  416   LSEVTAALRERLH--------RW  430


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +3

Query  8388  VRERMRRAEPAADRVGAASRDLEKH  8462
             VRE +R AE           +LE H
Sbjct  324   VREALRKAE----------KELESH  338


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +3

Query  5400  RALEASR  5420
             RAL+ASR
Sbjct  634   RALQASR  640


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +2

Query  155  LVSVENL*QW  184
            L+SVE+L  W
Sbjct  114  LISVEDL--W  121


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 8/22 (36%)
 Frame = +2

Query  2006  KAIGTVLVGPTPVNIIGRNLLT  2071
             KA  TVL GP P       LLT
Sbjct  193   KALDTVLFGP-P-------LLT  206


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7209  EVNYINIK  7232
             EV Y NIK
Sbjct  358   EVQYYNIK  365


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7198  PHISSSRS  7175
             PH  SSRS
Sbjct  609   PHLDSSRS  616


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1631  FFREDL  1648
             F REDL
Sbjct  91    FLREDL  96


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  485  VRNIRRL  505
            VRNI  L
Sbjct  68   VRNIHKL  74


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2708  LRQHLLRW  2731
             LR+ L RW
Sbjct  423   LRERLHRW  430


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1459  VAEFVTWLI  1433
             V E V WLI
Sbjct  134   VDEVVQWLI  142


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  8081  LRDLLLIVTRIV  8116
             L D +L+V  IV
Sbjct  211   LKDFMLVVS-IV  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5700  ENIKTKKN  5723
             E IK K N
Sbjct  381   EKIKKKRN  388


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3651  LTNSDS  3634
             LT SDS
Sbjct  516   LTHSDS  521


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = -1

Query  409  PPG----LNRIFSHRSNSP  365
            PPG    L+   S RS SP
Sbjct  604  PPGGSPHLD---SSRSHSP  619


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +1

Query  4201  LQSPKSRSSRI  4233
             LQ   SR  RI
Sbjct  636   LQA--SRNTRI  644


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1713  EESFR  1727
             EE FR
Sbjct  151   EETFR  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6554  NGSLAEE  6574
             NGS  EE
Sbjct  658   NGSIGEE  664


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6188  TNSSSGR  6208
             T+SS GR
Sbjct  665   TDSSPGR  671


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  671  EKSTASSS  694
            EK T  SS
Sbjct  29   EKATGTSS  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3480  EDKKLS  3497
             ED KLS
Sbjct  59    EDEKLS  64


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1615  LRDRL  1629
             LR+RL
Sbjct  423   LRERL  427


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3014  REILKEPVHG  3043
             R+ L EP HG
Sbjct  500   RQRLTEPQHG  509


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  5821  PSPPP--SPQ  5798
             PS PP  SP+
Sbjct  601   PSAPPGGSPH  610


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  698  HRTQQS  715
            HR +QS
Sbjct  252  HRAEQS  257


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/16 (43%), Positives = 11/16 (68%), Gaps = 4/16 (25%)
 Frame = +3

Query  1407  HKARVLA--EAMSQVT  1448
             HK  +L   +A+S+VT
Sbjct  407   HK--ILTAKQALSEVT  420


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  4941  QSLKNSQS  4918
             QSL  S+S
Sbjct  21    QSLSHSHS  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6220  LHYHSP  6203
             L YH P
Sbjct  96    LNYHDP  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1156  TILFNP  1139
             T+LF P
Sbjct  197   TVLFGP  202


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5368  EQEMEPV  5388
             E+E+E V
Sbjct  318   EEELEQV  324


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1698  PTAPP  1712
             P APP
Sbjct  601   PSAPP  605


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8772  KLVPVE  8789
             KL+ VE
Sbjct  113   KLISVE  118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7366  SLNDAD  7383
             SL+D D
Sbjct  401   SLDDVD  406


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5419  LDASR  5405
             LD SR
Sbjct  611   LDSSR  615


>ref|NP_067073.1|  leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 
1 [Homo sapiens]
 sp|A6NI73.1|LIRA5_HUMAN  RecName: Full=Leukocyte immunoglobulin-like receptor subfamily 
A member 5; AltName: Full=Leukocyte immunoglobulin-like receptor 
9; Short=LIR-9; AltName: Full=Immunoglobulin-like transcript 
11; Short=ILT-11; AltName: Full=CD85 antigen-like family 
member F; AltName: CD_antigen=CD85f; Flags: Precursor
Length=299

 GENE ID: 353514 LILRA5 | leukocyte immunoglobulin-like receptor, subfamily A
(with TM domain), member 5 [Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  6646  YRCVQLYYY  6620
             YRC   YYY
Sbjct  114   YRC---YYY  119


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5404  PWKHPGSQ  5427
             PW HP  Q
Sbjct  3     PWSHPSAQ  10


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7587  LLCLGM  7604
             LLCLG+
Sbjct  26    LLCLGL  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  9040  EPSDP  9054
             EPSDP
Sbjct  126   EPSDP  130


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  1571  ALFPRGP  1551
             ALFP GP
Sbjct  197   ALFPVGP  203


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/31 (32%), Positives = 11/31 (35%), Gaps = 18/31 (58%)
 Frame = +2

Query  5273  VEAIIR------------ILQQLLFIHFQNW  5329
             VE  IR            IL     I FQ+W
Sbjct  263   VENLIRMGMAGLILVVLGIL-----I-FQDW  287


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7356  LWAQP  7370
             LWA+P
Sbjct  49    LWAEP  53


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 6/27 (22%)
 Frame = +2

Query  2483  FTIPSINNETPGIRYQ---YNVLPQGW  2554
             F IPS      G RY    Y   P GW
Sbjct  101   FSIPSMTEHHAG-RYRCYYYS--PAGW  124


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             S LPSP
Sbjct  145   SALPSP  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2576  GILLVILSI  2550
             G  LV+L I
Sbjct  273   GLILVVLGI  281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  139  DPSDP  153
            +PSDP
Sbjct  126  EPSDP  130


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  1035  SDIAGTTSTLQE  1070
             SD  GT S LQ+
Sbjct  250   SD-SGTASHLQD  260


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -3

Query  9110  QIWSNQRDPVQA  9075
             Q W  QR P QA
Sbjct  285   QDWHSQRSP-QA  295


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8915  SSRGPRAASG  8944
             S R P AA G
Sbjct  289   SQRSPQAAAG  298


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  3874  CYY  3866
             CYY
Sbjct  116   CYY  118


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -3

Query  6365  RCYNLSTYS---W  6336
             RCY    YS   W
Sbjct  115   RCYY---YSPAGW  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5543  EELIR  5557
             E LIR
Sbjct  264   ENLIR  268


>pdb|1SYX|B  Chain B, The Crystal Structure Of A Binary U5 Snrnp Complex
 pdb|1SYX|D  Chain D, The Crystal Structure Of A Binary U5 Snrnp Complex
 pdb|1SYX|F  Chain F, The Crystal Structure Of A Binary U5 Snrnp Complex
Length=86


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  8679  WIYHTQGYFPD  8711
             W+   +GYFPD
Sbjct  52    WV--SEGYFPD  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 14/41 (34%), Positives = 15/41 (36%), Gaps = 20/41 (48%)
 Frame = +3

Query  1737  ETTTPPQKQEP-------ID-----K-------ELY-PLTS  1799
             ET TP Q  E        +D     K       ELY P TS
Sbjct  6     ETPTPTQRGEAESRGDGLVDVMWEYKWENTGDAELYGPFTS  46


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6779  KWNNT  6793
             KW NT
Sbjct  31    KWENT  35


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  5461  FYNS  5450
             FYNS
Sbjct  74    FYNS  77


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  4693  GDGFIDITM  4719
             GDG +D+ M
Sbjct  20    GDGLVDV-M  27


>pdb|2AXJ|A  Chain A, Crystal Structures Of T Cell Receptor Beta Chains Related 
To Rheumatoid Arthritis
 pdb|2AXJ|B  Chain B, Crystal Structures Of T Cell Receptor Beta Chains Related 
To Rheumatoid Arthritis
Length=242


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  46    IYYSQIV--NDFQK  57


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  593  LCASKDR  613
            LCAS DR
Sbjct  90   LCASRDR  96


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  43    LR-----LIYYSQIV  52


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +3

Query  807  VVEE--KAFSPEV  839
            V E+  K F PEV
Sbjct  111  VLEDLNKVFPPEV  123


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  68    REKKE  72


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  2733  PHLN--RCCLSS  2704
             P LN  R CLSS
Sbjct  179   PALNDSRYCLSS  190


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  163   EVHSG------VSTDPQP  174


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  52    VNDFQK  57


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  215   LSENDEWT  222


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  65    SVSRE  69


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  129   SEAEIS  134


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             LE++NK
Sbjct  112   LEDLNK  117


>pdb|2AXH|A  Chain A, Crystal Structures Of T Cell Receptor Beta Chains Related 
To Rheumatoid Arthritis
 pdb|2AXH|B  Chain B, Crystal Structures Of T Cell Receptor Beta Chains Related 
To Rheumatoid Arthritis
Length=242


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  46    IYYSQIV--NDFQK  57


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  43    LR-----LIYYSQIV  52


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 4/13 (30%)
 Frame = +2

Query  5171  LEELKNEAVRHFP  5209
             LE+LKN  V  FP
Sbjct  112   LEDLKN--V--FP  120


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  68    REKKE  72


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 6/18 (33%)
 Frame = +2

Query  5960  EVHNVWATHACVPTDPNP  6013
             EVH        V TDP P
Sbjct  163   EVHSG------VSTDPQP  174


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  52    VNDFQK  57


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2831  LPEKDSWT  2854
             L E D WT
Sbjct  215   LSENDEWT  222


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  65    SVSRE  69


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5776  SEGEIS  5793
             SE EIS
Sbjct  129   SEAEIS  134


 Score = 16.3 bits (31),  Expect(2) = 41120
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  105  TLLEALK  85
            T LE LK
Sbjct  110  TVLEDLK  116


 Score = 15.1 bits (28),  Expect(2) = 41120
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  40   ESSQAQI  20
            E S+A+I
Sbjct  127  EPSEAEI  133


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3587  DSQYAL  3604
             DS Y L
Sbjct  183   DSRYSL  188


>sp|Q14264.2|ENR1_HUMAN  RecName: Full=HERV-R_7q21.2 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein; AltName: Full=ERV-3 envelope 
protein; Short=ERV3 envelope protein; AltName: Full=HERV-R 
envelope protein; Short=ERV-R envelope protein; Contains: 
RecName: Full=Surface protein; Short=SU; Contains: RecName: 
Full=Transmembrane protein; Short=TM; Flags: Precursor
Length=604

 GENE ID: 2086 ERV3 | endogenous retroviral sequence 3 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3371  WYQLE  3385
             WYQLE
Sbjct  402   WYQLE  406


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1317  PDCKT  1331
             PDCKT
Sbjct  190   PDCKT  194


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4719  ESPHP  4733
             ESPHP
Sbjct  385   ESPHP  389


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3080  FLLLSLLM  3057
             FLLL L M
Sbjct  12    FLLLPLSM  19


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4667  PYVCF  4681
             PYVC+
Sbjct  78    PYVCY  82


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/13 (46%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  9035  VASPQILHISSCF  9073
             +AS   LH+ SC+
Sbjct  283   IASS--LHVASCY  293


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7643  HTTW  7654
             HTTW
Sbjct  33    HTTW  36


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  2730  GDLPHQTK  2753
             GDL  QTK
Sbjct  101   GDLLNQTK  108


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  3086  KQGQ--GQWTYQIYQE  3127
             KQG+  G   Y IY E
Sbjct  452   KQGEALG---YPIYDE  464


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/16 (37%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = +3

Query  1143  LNKIVRMYSPTSILDI  1190
             LN I+R+     +L+I
Sbjct  512   LNRIIRL---QAVLEI  524


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4134  LLPLS  4120
             LLPLS
Sbjct  14    LLPLS  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1284  MTETLL  1301
             MT TLL
Sbjct  41    MTKTLL  46


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  283  PPLAS  269
            PPLAS
Sbjct  269  PPLAS  273


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5742  TNRKSRR  5762
             T RKS R
Sbjct  465   TKRKSKR  471


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6819  LNLLA  6805
             LNLLA
Sbjct  533   LNLLA  537


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5301  NCCL  5312
             NCCL
Sbjct  572   NCCL  575


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 13/25 (52%)
 Frame = -1

Query  6739  YFSYCNK-------CSPWSSLDTDS  6686
             Y+S C K       CS      TDS
Sbjct  142   YYSSCHKNRYAHPACS------TDS  160


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4515  PSPFQR  4498
             PSPF R
Sbjct  389   PSPFSR  394


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +3

Query  8352  KWSKSSVIGWPTVR  8393
             KWS   V G  T+R
Sbjct  432   KWSGACVLG--TIR  443


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 23/48 (47%)
 Frame = +2

Query  2498  INNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPDIVIYQ  2641
             I NET G     N L Q         Q   TK     R      VIYQ
Sbjct  525   ITNETAG---ALNLLAQ---------QA--TKM----RN-----VIYQ  549


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  838  TSGLKA  821
            T GLKA
Sbjct  213  TTGLKA  218


 Score = 15.5 bits (29),  Expect(2) = 33599
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7021  WEGDCV  7004
             W G CV
Sbjct  433   WSGACV  438


 Score = 15.5 bits (29),  Expect(2) = 33599
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6964  TIKPS  6950
             TI PS
Sbjct  441   TIRPS  445


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  3745  FIYLFI  3728
             ++YL+I
Sbjct  234   YVYLYI  239


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4436  QNFRVY  4453
             Q FRV+
Sbjct  249   QQFRVF  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1783  SSLSIGSCF  1757
             SSL + SC+
Sbjct  285   SSLHVASCY  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4228  YYSLTLG  4208
             YY  TLG
Sbjct  367   YYNETLG  373


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9055  AYKQL  9069
             AY QL
Sbjct  425   AYRQL  429


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +2

Query  5831  LLGM--LMI  5851
             +LGM  L+I
Sbjct  1     MLGMNMLLI  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2864  IQKL  2875
             IQKL
Sbjct  591   IQKL  594


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7779  HKLAH  7765
             +KLAH
Sbjct  592   QKLAH  596


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3221  LFFALPL  3201
             LF  LPL
Sbjct  11    LFLLLPL  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3044  VYYDP  3058
             V YDP
Sbjct  80    VCYDP  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5965  YLCII  5951
             YL II
Sbjct  236   YLYII  240


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  356  IKRGRIRS  379
            IK  R RS
Sbjct  240  IKKTRTRS  247


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8361  KSSVIG  8378
             K S+IG
Sbjct  337   KTSIIG  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2087  KCNQSES  2067
             K N SES
Sbjct  380   KSNNSES  386


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  5885  YYGVPVWKE  5911
             YYG   W E
Sbjct  491   YYGPATWAE  499


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8086  RLTLD  8100
             RL LD
Sbjct  551   RLALD  555


>pdb|1HAQ|A  Chain A, Four Models Of Human Factor H Determined By Solution 
Scattering Curve-Fitting And Homology Modelling
Length=1213


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 6/18 (33%)
 Frame = -3

Query  4856  PPFY-GDSLTQMPVSFSC  4806
             PP+Y GDS     V F C
Sbjct  689   PPYYYGDS-----VEFNC  701


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = -1

Query  3250  LS--PYYY  3233
             LS  PYYY
Sbjct  686   LSSPPYYY  693


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9036  WRALRSC  9056
             WR L SC
Sbjct  238   WRPLPSC  244


 Score = 17.6 bits (34),  Expect(2) =  5973
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  4148  TVRAACW  4168
             T R  CW
Sbjct  1195  TLRTTCW  1201


 Score = 16.8 bits (32),  Expect(2) =  5973
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4191  LEFPT  4205
             LE+PT
Sbjct  1205  LEYPT  1209


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6644  VEINCTRPN  6670
             VEI C  P+
Sbjct  188   VEISCKSPD  196


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1112  SYWD  1101
             SYWD
Sbjct  349   SYWD  352


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6004  VCGYTG  5987
             VCGY G
Sbjct  534   VCGYNG  539


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4125  LSVCIV  4108
             L VCIV
Sbjct  663   LPVCIV  668


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6641  SVEINC  6658
             SVE NC
Sbjct  696   SVEFNC  701


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 12/44 (27%), Positives = 13/44 (29%), Gaps = 26/44 (59%)
 Frame = +3

Query  8292  ATYLEE*DRAWKGFCYKMGG---------KWSKSSVIGWPTVRE  8396
             ATY            YKM G          W      G PT R+
Sbjct  1001  ATY------------YKMDGASNVTCINSRWT-----GRPTCRD  1027


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  8352  CHPSYSKILSK  8320
             CHP Y   L K
Sbjct  398   CHPGYA--LPK  406


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3081  YRSRGK  3098
             YR RGK
Sbjct  761   YRCRGK  766


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3550  FAGFGI  3567
             F GFGI
Sbjct  942   FEGFGI  947


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +3

Query  1101  IPVGE---IYK  1124
             IP GE   +YK
Sbjct  981   IPMGEKKDVYK  991


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  3410  TFY-VDGAAN  3436
             T+Y  DGA N
Sbjct  1002  TYYKMDGASN  1011


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1088  CHPSY  1074
             CHP Y
Sbjct  398   CHPGY  402


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  9030  GEWRALRSCI  9059
             GEW  L  CI
Sbjct  658   GEWTTLPVCI  667


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7661  WDREIN  7678
             WD E+N
Sbjct  779   WDPEVN  784


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7206  GEVNY  7220
             GE+NY
Sbjct  104   GEINY  108


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6718  ICYNR  6732
             ICY R
Sbjct  545   ICYER  549


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  442  HTICFN  425
            HT+C N
Sbjct  771  HTVCIN  776


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7192  ISSSRS  7175
             I SSRS
Sbjct  863   INSSRS  868


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6314  IPIDNDTTSY  6343
             I  +N+TT Y
Sbjct  889   ISEENETTCY  898


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  2891  WASQIYP  2911
             W  Q YP
Sbjct  19    WSDQTYP  25


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1480  LPLCII  1463
             LP CI+
Sbjct  663   LPVCIV  668


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8211  CSMPQ  8225
             CSM Q
Sbjct  785   CSMAQ  789


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  986  WMHSIPFC  963
            W +SIP C
Sbjct  840  W-QSIPLC  846


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3720  IPLC  3709
             IPLC
Sbjct  843   IPLC  846


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8988  KVPCS  8974
             K+PCS
Sbjct  849   KIPCS  853


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +1

Query  5401  EPWKHPGSQP---KTAC  5442
             E W HP   P   KT C
Sbjct  958   EKWSHP---PSCIKTDC  971


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  55   THCLSL  72
            T CLSL
Sbjct  969  TDCLSL  974


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  9140  THCLSL  9157
             T CLSL
Sbjct  969   TDCLSL  974


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1624  CLSVQSF  1604
             CLS  SF
Sbjct  971   CLSLPSF  977


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4812  ERDWHLGQGV  4841
             +R+ H GQ V
Sbjct  147   DREYHFGQAV  156


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4317  NTAICT  4300
             NTA CT
Sbjct  287   NTAKCT  292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7813  IPQPICYVKP  7784
             IP P C  KP
Sbjct  297   IPAPRCTLKP  306


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1782  VPCL  1771
             VPCL
Sbjct  365   VPCL  368


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5917  HHSILCI  5937
             H SI CI
Sbjct  710   HRSITCI  716


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 11/22 (50%)
 Frame = +2

Query  4247  LKK------IIGQVRDQAEHLK  4294
             LKK      II       EHLK
Sbjct  732   LKKCKSSNLII-----LEEHLK  748


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5812  PPSPQV  5795
             PP PQ+
Sbjct  794   PPPPQI  799


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6140  PLCV  6151
             PLCV
Sbjct  844   PLCV  847


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4246  IKENY  4260
             I ENY
Sbjct  1155  IMENY  1159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7904  YSPL  7915
             YSPL
Sbjct  259   YSPL  262


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4587  MENRW  4601
             MEN W
Sbjct  414   MENGW  418


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1581  CGKEG  1595
             CGK+G
Sbjct  476   CGKDG  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 11/32 (34%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  6422  CAPAGFAILKCNNKTFNGTGPCTNVSTVQCTH  6517
             C P GF I           GP      VQC H
Sbjct  579   CKP-GFTIV----------GP----NSVQCYH  595


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  1226  YIVS  1215
             YIVS
Sbjct  1040  YIVS  1043


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2543  EAHCTD  2526
             E HC D
Sbjct  171   EMHCSD  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3833  SNYCD  3819
             S YCD
Sbjct  336   SYYCD  340


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3327  IQVACQ  3310
             I VAC+
Sbjct  394   IDVACH  399


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  595  VCIKG  609
            VCI G
Sbjct  773  VCING  777


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  3946  SRNMATRL  3969
             S NM T L
Sbjct  802   SHNMTTTL  809


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8523  QEEEEV  8540
             QE EE+
Sbjct  828   QEGEEI  833


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4214  SQGVVESM  4237
             S+GVV  M
Sbjct  920   SHGVVAHM  927


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2860  IDSPAV  2843
             ID PA+
Sbjct  947   IDGPAI  952


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  443   PYYMF  429
             PY MF
Sbjct  1062  PYEMF  1066


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5243  YETYGD  5260
             YE +GD
Sbjct  1063  YEMFGD  1068


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4532  DNSDI  4546
             DN DI
Sbjct  1098  DNGDI  1102


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +1

Query  8335  AIRWVASGQK  8364
             A RW A  QK
Sbjct  1162  ALRWTAK-QK  1170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8759  KGQWI  8745
             KG+W+
Sbjct  50    KGEWV  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8394  ERMRR  8408
             E MRR
Sbjct  320   ENMRR  324


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3735  CSFPPIPLC  3709
             CS   I LC
Sbjct  785   CSMAQIQLC  793


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  130  PESHN  116
            P SHN
Sbjct  800  PNSHN  804


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6485  CTNVSTVQ  6508
             C N  TVQ
Sbjct  1030  CVNPPTVQ  1037


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1198  PCLMSR  1181
             PC  SR
Sbjct  1148  PCVISR  1153


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3064  RLNSR  3078
             RL SR
Sbjct  1188  RLSSR  1192


>pdb|1PK6|A  Chain A, Globular Head Of The Complement System Protein C1q
Length=133


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +2

Query  827  QPRSDTHVFSIIRRSHP  877
            QPR     FS IRR  P
Sbjct  1    QPRP---AFSAIRRNPP  14


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3889  GYYFF  3875
             GYY+F
Sbjct  46    GYYYF  50


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  7565  SGKLICTTAVP  7597
             SG  +CT  VP
Sbjct  37    SGRFVCT--VP  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  4699  GFIDITMKALIQ  4734
             GF D T K L Q
Sbjct  77    GFCDTTNKGLFQ  88


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5866  FCSTTD  5849
             FC TT+
Sbjct  78    FCDTTN  83


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  7204  IVPHISSSR  7178
             IV   SSSR
Sbjct  64    IV---SSSR  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3157  IFSCFQIF  3134
             +FS F IF
Sbjct  124   VFSGFLIF  131


>emb|CAD88642.1|  immunoglobulin lambda light chain [Homo sapiens]
Length=82


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/13 (61%), Positives = 10/13 (76%), Gaps = 3/13 (23%)
 Frame = +3

Query  4776  LVITTYWGLHTGE  4814
             LVIT   GL+TG+
Sbjct  54    LVIT---GLQTGD  63


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3721  NSFVCWY  3701
             N F+ WY
Sbjct  11    NNFISWY  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8168  GDSTNI  8151
             GDS NI
Sbjct  4     GDSSNI  9


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8425  IGWEQHL  8445
             I W QHL
Sbjct  14    ISWYQHL  20


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  290  PVAAPRLL  267
            P  AP LL
Sbjct  21   PGTAPKLL  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3267  SLNLGVF  3247
             SL  GVF
Sbjct  75    SLSAGVF  81


>emb|CAD88750.1|  immunoglobulin lambda light chain variable region [Homo sapiens]
Length=97


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  45   DVSNRPSGVSNR  56


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  50   PSGVSNR  56


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  35    PGK---------APKFMIYDVSNRPSGVSNRFS  58


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3245  GKTPKF  3262
             GK PKF
Sbjct  36    GKAPKF  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  4     SGSPGQSITISCT  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  585  TLYCV  599
            TL+CV
Sbjct  91   TLFCV  95


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5921  TLFC  5932
             TLFC
Sbjct  91    TLFC  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  69    TISGLQAED  77


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  55    NRFSGSK  61


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 9/16 (56%), Gaps = 2/16 (12%)
 Frame = -2

Query  5790  YF--SFTLIATVFCSF  5749
             Y+  S+T   T FC F
Sbjct  81    YYCSSYTNSSTLFCVF  96


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6406  NSHTLLC  6426
             NS TL C
Sbjct  88    NSSTLFC  94


>pdb|1IM9|A  Chain A, Crystal Structure Of The Human Natural Killer Cell Inhibitory 
Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4
 pdb|1IM9|E  Chain E, Crystal Structure Of The Human Natural Killer Cell Inhibitory 
Receptor Kir2dl1 Bound To Its Mhc Ligand Hla-Cw4
Length=276


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  52    WVEQEGPEYWDRETQKY  68


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  113   GYNQF  117


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  127   LNEDLRSWTA  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  256   QRYTCH  261


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7536  SFRYLST  7516
             S RY ST
Sbjct  5     SMRYFST  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  23    FIAVGY  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6541  STAVKW  6558
             ST V W
Sbjct  10    STSVSW  15


>emb|CAC03926.1|  T-cell receptor beta chain [Homo sapiens]
Length=83


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  25    IYYSQIV--NDFQK  36


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  22    LR-----LIYYSQIV  31


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  47    REKKE  51


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  31    VNDFQK  36


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  44    SVSRE  48


>ref|NP_001138619.1|  corticotropin-releasing factor receptor 1 isoform 3 [Homo sapiens]
Length=375

 GENE ID: 1394 CRHR1 | corticotropin releasing hormone receptor 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  7120  RAAINKRW--W  7146
             R AI KRW  W
Sbjct  331   RSAIRKRWHRW  341


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1445  YLAHCFS  1425
             YL HC S
Sbjct  84    YLGHCIS  90


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4563  LLGTTFM  4543
             LLG T+M
Sbjct  282   LLGITYM  288


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6944  NSTWF  6958
             N TWF
Sbjct  126   NATWF  130


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7781  NWFNITNWLW  7810
             N F +TN  W
Sbjct  156   NYFHVTNFFW  165


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VT+FF
Sbjct  160   VTNFF  164


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  4727  RAFIVMSIKPSP---SF  4686
             RA   MSI  SP   SF
Sbjct  353   RA---MSIPTSPTRVSF  366


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 18/28 (64%)
 Frame = +1

Query  1051  LLVPF------------RNK*DG*QIIH  1098
             LLV F            RN      IIH
Sbjct  94    LLVAFVLFLRLRSIRCLRN------IIH  115


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6288  MHFFIN  6305
             M FF+N
Sbjct  288   MLFFVN  293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5342  AMSTPNS  5322
             AMS P S
Sbjct  354   AMSIPTS  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3447  LVSLLAA  3427
             LV LL A
Sbjct  91    LVALLVA  97


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2767  FFLMF  2753
             FF MF
Sbjct  163   FFWMF  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5478  AMKATL  5461
             A KATL
Sbjct  272   AVKATL  277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8524  KRRRRW  8541
             KR  RW
Sbjct  336   KRWHRW  341


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 3/17 (17%)
 Frame = -1

Query  1081  HPICS*RVLVVPAMSLP  1031
             H I   R  V  AMS P
Sbjct  345   HSI---RARVARAMSIP  358


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  58  HCLSL  72
           HC SL
Sbjct  87  HCISL  91


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9143  HCLSL  9157
             HC SL
Sbjct  87    HCISL  91


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7097  IRCSSNI  7117
             IRC  NI
Sbjct  107   IRCLRNI  113


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6189  PIVVA  6203
             PI+VA
Sbjct  201   PIIVA  205


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6906  PQLKL  6892
             PQL L
Sbjct  5     PQLRL  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3017  EILKE  3031
             EIL E
Sbjct  64    EILNE  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1934  FLVSIF  1917
             F VS+F
Sbjct  317   FFVSVF  322


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2827  SAARKR  2844
             SA RKR
Sbjct  332   SAIRKR  337


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 2/20 (10%)
 Frame = -3

Query  7751  IILVHSFLAGFAI-LQLRSV  7695
             I LV   L  F   L LRS+
Sbjct  89    ISLV-ALLVAFVLFLRLRSI  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  386  KNSVKAR  406
            K S+ AR
Sbjct  344  KHSIRAR  350


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3798  ALSIP  3784
             A+SIP
Sbjct  354   AMSIP  358


>sp|P30510.2|1C14_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-14 alpha 
chain; AltName: Full=MHC class I antigen Cw*14; Flags: 
Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect(2) =  3104
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 16.3 bits (31),  Expect(2) =  3104
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  35    SVSRPGRGE  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7536  SFRYLST  7516
             S RY ST
Sbjct  28    SMRYFST  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


>ref|NP_006712.2|  adenosine kinase isoform b [Homo sapiens]
Length=362

 GENE ID: 132 ADK | adenosine kinase [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +3

Query  1275  KNWMTETLLVQNA  1313
             KNWM    LV+ A
Sbjct  171   KNWM----LVEKA  179


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  48  LGNPLL  65
           +GNPLL
Sbjct  29  MGNPLL  34


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  9133  LGNPLL  9150
             +GNPLL
Sbjct  29    MGNPLL  34


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3454  KSRICY  3471
             K R+CY
Sbjct  178   KARVCY  183


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3589  LTICIR  3606
             LT CIR
Sbjct  333   LTECIR  338


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  612  EIKDTKE  632
            E KD KE
Sbjct  254  ETKDIKE  260


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  5006  QGRISTILGTSS  5041
             QGR  TI+ T S
Sbjct  283   QGRDDTIMATES  294


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6453  VIIRR  6467
             +IIRR
Sbjct  346   IIIRR  350


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -1

Query  3421  YIEGFCSYYGFFL  3383
             YI       GFFL
Sbjct  183   YIA------GFFL  189


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5221  EPNPRKM  5201
             EP P K+
Sbjct  7     EPKPKKL  13


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4986  EYQAG  5000
             EY+AG
Sbjct  76    EYHAG  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -3

Query  8822  LS--FIGLFY  8799
             LS  FI  FY
Sbjct  214   LSAPFISQFY  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7006  VTSFSV  6989
             VT F V
Sbjct  296   VTAFAV  301


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6044  FLSHL  6030
             FLS+L
Sbjct  323   FLSQL  327


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7572  FPEQP  7558
             FPE P
Sbjct  355   FPEKP  359


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5165  ELLEEL  5182
             EL +EL
Sbjct  64    ELFDEL  69


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  175  LAVAPE  192
            L V PE
Sbjct  189  LTVSPE  194


>ref|NP_000568.1|  interleukin-1 receptor antagonist protein isoform 3 [Homo sapiens]
Length=159

 GENE ID: 3557 IL1RN | interleukin 1 receptor antagonist [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6424  CPGWF  6438
             CPGWF
Sbjct  123   CPGWF  127


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6302  KLDIIPID  6325
             K D++PI+
Sbjct  52    KIDVVPIE  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4838  SLTQMP  4821
             SLT MP
Sbjct  139   SLTNMP  144


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8755  VSGYLTPGPGV  8723
             V GYL  GP V
Sbjct  38    VAGYL-QGPNV  47


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +2

Query  7496  LQA-RILAVER---YLKDQQL  7546
             +QA RI  V     YL + QL
Sbjct  17    MQAFRIWDVNQKTFYLRNNQL  37


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2207  CTEME  2221
             CT ME
Sbjct  129   CTAME  133


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8778  VPVEP  8792
             VP+EP
Sbjct  56    VPIEP  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1091  ICHPS  1077
             IC PS
Sbjct  6     ICRPS  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4430  KIQNFRV  4450
             K Q FR+
Sbjct  16    KMQAFRI  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             +LEE I
Sbjct  48    NLEEKI  53


>ref|NP_055461.1|  phosphatidate phosphatase LPIN2 [Homo sapiens]
Length=896

 GENE ID: 9663 LPIN2 | lipin 2 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  8069  SYHRLRDL  8092
             SYHRL +L
Sbjct  849   SYHRLSEL  856


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7775  LWNW  7786
             LWNW
Sbjct  678   LWNW  681


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = +2

Query  7403  LSG-----IVQQQN  7429
             LSG     +VQQQ+
Sbjct  27    LSGCIDVIVVQQQD  40


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  335  LSPSSL  318
            LSPSSL
Sbjct  765  LSPSSL  770


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3821  DISHV  3807
             DISHV
Sbjct  136   DISHV  140


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4229  ESMNKEL  4249
             ESM K+L
Sbjct  565   ESMTKQL  571


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6554  NGSLAEEE  6577
             N SL EEE
Sbjct  201   NASLKEEE  208


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  9026  DWGVASPQIL  9055
             +W  A P IL
Sbjct  520   NWALAAPMIL  529


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1019  ERTKG  1033
             ERTKG
Sbjct  841   ERTKG  845


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4923  DCFSDSA  4943
             +C SDSA
Sbjct  457   ECLSDSA  463


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2903  SDLPNS  2886
             SDLP S
Sbjct  585   SDLPSS  590


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  8956  FLKYSGCSSRA  8924
             FL Y  CS RA
Sbjct  730   FL-Y--CSARA  737


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  1130  PSFINFSYW  1104
             P F  F YW
Sbjct  875   PEFSSFCYW  883


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8489  SYQC  8500
             SYQC
Sbjct  42    SYQC  45


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4513  RGSSN  4527
             RGSSN
Sbjct  197   RGSSN  201


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5141  EPHNEWT  5161
             E H EWT
Sbjct  259   ESHMEWT  265


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1445  NKFSYH  1462
             NK SYH
Sbjct  846   NKSSYH  851


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6709  WSSLDT  6692
             WS L+T
Sbjct  228   WSPLET  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5994  YPQT  6005
             YPQT
Sbjct  235   YPQT  238


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  7863  TILKPTKP  7840
             TI KP KP
Sbjct  323   TIVKP-KP  329


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/34 (32%), Positives = 11/34 (32%), Gaps = 21/34 (61%)
 Frame = +1

Query  5755  AEDSGNE--------------------SE-GEIS  5793
             A DSG E                    SE GEIS
Sbjct  451   AADSGTECLSDSAMDLPDVTLSLCGGLSENGEIS  484


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  7170  SSD-----LEEEI  7193
             SSD     LEE I
Sbjct  605   SSDEGSQELEESI  617


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6859  ILRRGP  6876
             IL RGP
Sbjct  757   ILPRGP  762


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7414  SAAAE  7428
             SAAAE
Sbjct  174   SAAAE  178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  2325  SE-NLIRE  2345
             SE NLI E
Sbjct  303   SEDNLISE  310


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4948  LIAESEK  4928
             LI E EK
Sbjct  307   LISEVEK  313


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2618  NPDIVI  2635
             NP+ VI
Sbjct  507   NPNLVI  512


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8585  QGSCR  8599
             QG CR
Sbjct  667   QGTCR  671


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7912  IIVSD  7926
             II+SD
Sbjct  685   IIISD  689


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3877  FCYYR  3863
             FCY R
Sbjct  880   FCYWR  884


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  414  KKYK  425
            KKYK
Sbjct  160  KKYK  163


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8127  PRSSTI  8110
             PR  TI
Sbjct  285   PRTATI  290


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -2

Query  3177  WA---PLIL  3160
             WA   P+IL
Sbjct  521   WALAAPMIL  529


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 15/32 (46%)
 Frame = +2

Query  5756  QK-----TVAMRVKEKYQHL------WRWGWR  5818
             QK     TV   VK+K   +      W W WR
Sbjct  535   QKSLPKATVESWVKDK---MPKKSGRW-WFWR  562


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8270  QGACR  8284
             QG CR
Sbjct  667   QGTCR  671


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6833  NNKTII  6850
             N+K II
Sbjct  682   NDKIII  687


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7416  CSSRTI  7433
             CS R I
Sbjct  733   CSARAI  738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4451  KPENF  4437
             KPE F
Sbjct  782   KPEKF  786


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  404  RGKEKI  421
            R KEK+
Sbjct  59   RSKEKV  64


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  520  PSICLQPSDVS  488
            PS   Q SD+S
Sbjct  131  PS---QSSDIS  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 15/32 (46%)
 Frame = +3

Query  7665  TEKLTITQA*YTP*LKNRKTS---KKRMNKNY  7751
             TE  TI    +TP       S   KKR  K Y
Sbjct  143   TE--TI----FTP------SSVKKKKRRRKKY  162


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  3027  KNQYMECIMT  3056
             K  +ME I T
Sbjct  485   KEKFMEHIIT  494


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3772  TIFRWN  3789
             TI+ WN
Sbjct  675   TIYLWN  680


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6505  TMYTWN  6522
             T Y WN
Sbjct  675   TIYLWN  680


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3689  YLAWV  3703
             YL WV
Sbjct  747   YLHWV  751


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4208  DCREF  4194
             DCR F
Sbjct  826   DCRIF  830


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8936  QLSGHV  8919
             QL G+V
Sbjct  6     QLAGQV  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  7208  RSELYKYKVVKIE  7246
             RS   K KV+ IE
Sbjct  59    RS---KEKVIDIE  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  827  ESLLF  813
            E LLF
Sbjct  211  EPLLF  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6218  EKGEI  6232
             E GEI
Sbjct  479   ENGEI  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4420  TNYKNS  4437
             T YK S
Sbjct  633   TSYKKS  638


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4943  YKKGL  4957
             YKK L
Sbjct  635   YKKSL  639


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3942  QSTCPC  3925
             Q TC C
Sbjct  667   QGTCRC  672


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2679  ISKSD  2665
             I KSD
Sbjct  694   ITKSD  698


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -2

Query  5346  FCY  5338
             FCY
Sbjct  880   FCY  882


>sp|Q9N2J9.1|ENH2_HUMAN  RecName: Full=HERV-H_3q26 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein; AltName: Full=Env protein 
HERV-H/p60; AltName: Full=HERV-H/env60; Contains: RecName: 
Full=Surface protein; Short=SU; Contains: RecName: Full=Transmembrane 
protein; Short=TM; Flags: Precursor
Length=563


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  1610  IFHLVS  1593
             IFHLVS
Sbjct  543   IFHLVS  548


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5909  PSTQVPH  5889
             PSTQ PH
Sbjct  287   PSTQLPH  293


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6982  PFSTPS  6965
             PFSTPS
Sbjct  317   PFSTPS  322


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  7772  LPIY--LIPIIL  7743
             LPI   LIPI L
Sbjct  524   LPILSPLIPIFL  535


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 11/34 (32%), Positives = 11/34 (32%), Gaps = 21/34 (61%)
 Frame = -2

Query  507  YSLLMFLTGQD*LRIVLAPCLPILYVLIYIFSFP  406
            YSLL                   LY L   FSFP
Sbjct  18   YSLL-------------------LYSLL--FSFP  30


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4368  SPALYPP  4348
             SP LYPP
Sbjct  100   SPHLYPP  106


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2478  VYFLKSSSK  2452
             +YFL  SSK
Sbjct  110   IYFLDRSSK  118


 Score = 19.7 bits (39),  Expect(2) =  3433
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6788  YSILLY  6771
             YS LLY
Sbjct  18    YSLLLY  23


 Score = 16.3 bits (31),  Expect(2) =  3433
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 1/14 (7%)
 Frame = -2

Query  6750  LIFPIFPIVTNALP  6709
             L F  FPI    LP
Sbjct  25    LLFS-FPILCHPLP  37


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 15/35 (42%)
 Frame = -1

Query  8293  ANSSTSSL--YY---FYN-----PI-C-PL---SY  8234
             A S TS L  +Y    Y      PI C PL   SY
Sbjct  7     ASSNTSTLMKFYSLLLYSLLFSFPILCHPLPLPSY  41


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4170  HQQAA  4156
             HQQAA
Sbjct  125   HQQAA  129


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -2

Query  4194  PNSC-LIP  4174
             P SC LIP
Sbjct  254   PSSCLLIP  261


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7213  TSPIVPHISSS  7181
             TSP+ PH   S
Sbjct  87    TSPVSPHLRTS  97


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  68    ISLPSS  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7398  NYCL  7409
             NYCL
Sbjct  226   NYCL  229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = -2

Query  3804  SWALSI--PSKNSTFLIP  3757
             SW L I  P      LIP
Sbjct  521   SWVLPILSP------LIP  532


 Score = 16.8 bits (32),  Expect(2) = 16849
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +3

Query  8559  QVPLRPMTYKAA  8594
             Q PL P+T  AA
Sbjct  294   QSPLQPLT--AA  303


 Score = 15.9 bits (30),  Expect(2) = 16849
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  8668  SL--ICGSTT  8691
             SL   CGS T
Sbjct  336   SLFFLCGSST  345


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 6/20 (30%)
 Frame = +1

Query  2746  RQKTSER-TSIPLDGL*TPS  2802
             RQ    R T IPL  L  PS
Sbjct  169   RQ----RPTGIPLGNL-SPS  183


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 3/10 (30%)
 Frame = -2

Query  5427  LTSWM---LP  5407
             L  WM   LP
Sbjct  516   LSNWMSWVLP  525


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4513  RGSSNT  4530
             R SSNT
Sbjct  6     RASSNT  11


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1162  CIALP  1176
             CI LP
Sbjct  67    CISLP  71


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6140  PLCVS  6154
             PLC+S
Sbjct  164   PLCIS  168


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  553  KNLDHYI  573
            KNL  YI
Sbjct  137  KNLSPYI  143


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2062  ISSNY  2048
             +SSNY
Sbjct  223   VSSNY  227


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2736  LPHQ  2747
             LPHQ
Sbjct  291   LPHQ  294


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +3

Query  1038  DIAGTTSTLQEQI  1076
             DI  T S LQ Q+
Sbjct  434   DISQTLSGLQAQV  446


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2767  FFLMFF  2750
             F L+FF
Sbjct  534   FLLLFF  539


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7065  FPTFCH  7048
             FP  CH
Sbjct  29    FPILCH  34


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5363  LSSNAYSA  5340
             L S AY A
Sbjct  70    LPSSAYPA  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3250  LSPY  3239
             LSPY
Sbjct  139   LSPY  142


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  199  VPVRAPL  179
            +PV APL
Sbjct  159  IPVAAPL  165


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  1440  QVTNSATIMMQ  1472
             QV  SA + +Q
Sbjct  445   QVDSSAAVVLQ  455


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1852  LPPYL  1838
             LP YL
Sbjct  38    LPSYL  42


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  531  PSLQT  545
            P LQT
Sbjct  79   PALQT  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4477  LERTSK  4494
             L+R SK
Sbjct  113   LDRSSK  118


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  2738  TTPDKKHQ  2761
             T PD  HQ
Sbjct  119   TSPDISHQ  126


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 4/10 (40%)
 Frame = -3

Query  9020  QAT----PPW  9003
             QA     PPW
Sbjct  505   QASNYAEPPW  514


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  3835  SPITVIFLM  3809
             SP   IFL+
Sbjct  528   SPLIPIFLL  536


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1566  KGCWKC  1583
             K CW C
Sbjct  62    KNCWLC  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8192  KNSAVSLL  8215
             KN   SLL
Sbjct  264   KNNSESLL  271


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3645  NSDSL  3631
             NS+SL
Sbjct  266   NSESL  270


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1290  ETLLV  1304
             E LLV
Sbjct  268   ESLLV  272


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3737  LVHFLQFLC  3711
             LV+ L FLC
Sbjct  333   LVQSLFFLC  341


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -3

Query  8597  YSCLVSHW  8574
             Y CL   W
Sbjct  346   YMCLPANW  353


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  498  LMFLT  484
            L FLT
Sbjct  359  LVFLT  363


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5853  VVLQ  5864
             VVLQ
Sbjct  452   VVLQ  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2514  QGLD  2525
             QGLD
Sbjct  458   QGLD  461


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3644  LVNQIIE  3664
             LV Q I+
Sbjct  546   LVSQFIQ  552


>sp|Q95604.1|1C17_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-17 alpha 
chain; AltName: Full=MHC class I antigen Cw*17; Flags: 
Precursor
Length=372

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  6406  WLKGYL  6389
             WL GYL
Sbjct  191   WLRGYL  196


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  8012  LVNGSLALI--W  8041
             L  G LALI  W
Sbjct  12    LLSGALALIETW  23


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  136   GYNQF  140


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    WK P SQP
Sbjct  292   EPCTLRWK-PSSQP  304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8283  LQAPCT  8266
             LQ PCT
Sbjct  290   LQEPCT  295


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  4732  QE*VQKYTSH  4761
             QE  Q YT H
Sbjct  277   QE--QRYTCH  284


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7552  PQELLIL  7532
             PQ LL L
Sbjct  6     PQALLLL  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  357   SNSAQGSD  364


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPQALLLLLS  14


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7011  IVSLPSVL  6988
             IVS P VL
Sbjct  311   IVSGPAVL  318


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  340   RRKSSG  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  322   AVLAVL  327


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  325   AVLAVL  330


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7070  LLFLLS  7053
             LL LLS
Sbjct  9     LLLLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7854  KPTKPPTI  7831
             KP   PTI
Sbjct  299   KPSSQPTI  306


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  7441  PQQIVLLL  7418
             PQ   LLL
Sbjct  6     PQALLLLL  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  143  PQTLL  157
            PQ LL
Sbjct  6    PQALL  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  809  YFY  801
            YFY
Sbjct  31   YFY  33


>ref|NP_002695.1|  platelet basic protein preproprotein [Homo sapiens]
Length=128

 GENE ID: 5473 PPBP | pro-platelet basic protein (chemokine (C-X-C motif) ligand
7) [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3083  VFLLLSLLM  3057
             V LLLSLL+
Sbjct  22    VLLLLSLLL  30


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  3044  LHVLVLLESL  3015
             L+VL LL SL
Sbjct  20    LQVLLLL-SL  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1758  KQEPIDKELY  1787
             K+E  D +LY
Sbjct  49    KEESLDSDLY  58


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8935  CIRSTS  8952
             CI  TS
Sbjct  65    CIKTTS  70


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  514  ICLQP  500
            ICL P
Sbjct  104  ICLDP  108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7084  GRGIHC  7067
             G G HC
Sbjct  84    GKGTHC  89


>ref|NP_817123.1|  desmoglein-4 isoform 2 preproprotein [Homo sapiens]
Length=1040

 GENE ID: 147409 DSG4 | desmoglein 4 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 10/18 (55%)
 Frame = -3

Query  8537  LLLLLCF*PGTSSIGSCC  8484
             LLLLLC          CC
Sbjct  648   LLLLLC----------CC  655


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  5386  LAPFLALLC  5360
             LAP L LLC
Sbjct  645   LAPLLLLLC  653


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7282  SGAERKKSS  7308
             SGA RK SS
Sbjct  753   SGAARKRSS  761


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4522  YCPFTFPE  4499
             YCP  FPE
Sbjct  493   YCPNIFPE  500


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2576  GILLVIL  2556
             GILL IL
Sbjct  639   GILLLIL  645


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +1

Query  6538  NSTAVKWQSSRR  6573
             N T  KWQ  RR
Sbjct  36    NGTT-KWQTVRR  46


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7477  CELQQM  7460
             CEL QM
Sbjct  576   CELAQM  581


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = +3

Query  7269  RQREEW------CRE  7295
             RQ  EW      CRE
Sbjct  46    RQKREWIKFAAACRE  60


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = -3

Query  2900  DLP-----NSISPLTS  2868
             DLP      S SP+TS
Sbjct  1010  DLPIGQTVGSTSPMTS  1025


 Score = 18.5 bits (36),  Expect(2) =  7620
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3301  DRVLAS  3318
             +RVLAS
Sbjct  966   ERVLAS  971


 Score = 15.5 bits (29),  Expect(2) =  7620
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3240  YGERLL  3257
             Y ER L
Sbjct  964   YAERVL  969


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2860  IDSPAV  2843
             IDSP V
Sbjct  506   IDSPSV  511


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  4342  PFSFKIVDE  4316
             PF F +VDE
Sbjct  523   PFTFCVVDE  531


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  5181  LRMKLLDI  5204
             LR K +DI
Sbjct  143   LRVKVMDI  150


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5836  WDVDDL  5853
             W VDDL
Sbjct  823   WIVDDL  828


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 11/21 (52%)
 Frame = +2

Query  6842  TIIFKQSSGGDPE-----IVT  6889
             TIIF      DP+     +VT
Sbjct  922   TIIF------DPQLAPNVVVT  936


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7183  SRSEDL  7166
             SR EDL
Sbjct  132   SRGEDL  137


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  3811  MFIL  3800
             MFIL
Sbjct  208   MFIL  211


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4474  TLERTS  4491
             TLE TS
Sbjct  268   TLEKTS  273


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8172  SIGVRN  8189
             SIGV N
Sbjct  348   SIGVKN  353


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5238  ISMKLMGIL  5264
             I M  +GIL
Sbjct  633   IGMMVLGIL  641


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  7510  DSCLELLD  7487
             +SC+E LD
Sbjct  830   ESCMETLD  837


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2417  VLDVGD  2434
             VLDV D
Sbjct  259   VLDVND  264


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7431  LFCCC  7417
             L CCC
Sbjct  651   LLCCC  655


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8131  QGVGSP  8148
             +GVGSP
Sbjct  809   EGVGSP  814


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2846  SWTVND  2863
             SW V+D
Sbjct  822   SWIVDD  827


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1185  DIRQGP  1202
             D+R+GP
Sbjct  378   DVREGP  383


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8158  VESPTVLES  8184
             ++SP VL S
Sbjct  506   IDSPSVLIS  514


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  4350  GGTVQG  4367
             GGTV+G
Sbjct  722   GGTVEG  727


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -1

Query  8380  HPITLLFD-HLPP  8345
             +P T  FD +L P
Sbjct  919   QPTTIIFDPQLAP  931


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1156  TILFNP  1139
             TI F+P
Sbjct  922   TIIFDP  927


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4818  LFLLY  4804
             LFL Y
Sbjct  122   LFLIY  126


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3971  YNLV  3960
             YNLV
Sbjct  233   YNLV  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1215  RDYVD  1229
             RDY D
Sbjct  767   RDYAD  771


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7410  PDNNCL  7393
             P N+CL
Sbjct  798   PANDCL  803


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3832  PITVIF  3815
             P T+IF
Sbjct  920   PTTIIF  925


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2669  DLEIGQ  2686
             DL IGQ
Sbjct  1010  DLPIGQ  1015


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7417  HYTRQ  7403
             HYT Q
Sbjct  1036  HYTQQ  1040


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2264  NTPVF  2278
             N PVF
Sbjct  153   NAPVF  157


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2631  TMSGF  2617
             TMS F
Sbjct  220   TMSSF  224


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4461  TAEIHF  4478
             T EI+F
Sbjct  443   TGEIQF  448


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5822  GTMLLGMLM  5848
             G M LG L+
Sbjct  634   GMMVLGILL  642


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2420  VLLLI  2406
             +LLLI
Sbjct  640   ILLLI  644


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6774  LLMLQCAC  6751
             LL+L C C
Sbjct  648   LLLLLCCC  655


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5943  ASDAQNR  5923
             AS+ Q+R
Sbjct  702   ASNTQDR  708


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  492  TSEGC  506
            T EGC
Sbjct  982  TTEGC  986


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = +1

Query  3859  ATC-----SSKRN  3882
             A C      SKRN
Sbjct  56    AACREGEDNSKRN  68


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  4801  RPQYVVIT  4778
             RP Y V T
Sbjct  94    RPPYGVFT  101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5930  CASDA  5944
             CA DA
Sbjct  180   CATDA  184


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8769  YKLVPVEP  8792
             YK V  EP
Sbjct  196   YKIVSQEP  203


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4266  CPIIF  4252
             CP IF
Sbjct  494   CPNIF  498


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4645  VLILIL  4628
             +L LIL
Sbjct  640   ILLLIL  645


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  864  EGATPQD  884
            EGA P+D
Sbjct  684  EGAHPED  690


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6626  VQLNT  6640
             V+LNT
Sbjct  732   VELNT  736


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3694  GMGT  3705
             GMGT
Sbjct  737   GMGT  740


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7781  STNLP  7767
             ST+LP
Sbjct  865   STDLP  869


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7286  VQREKR  7303
             V R+KR
Sbjct  44    VRRQKR  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6897  KLCVT  6883
             KLC T
Sbjct  178   KLCAT  182


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5184  RMKLLDI  5204
             R K LD+
Sbjct  256   RIKVLDV  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2818  TAYSA  2832
             T YSA
Sbjct  272   TSYSA  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6641  SVEINC  6658
             S+E NC
Sbjct  277   SIEENC  282


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6439  KTSRGTI  6419
             KT  GTI
Sbjct  477   KTATGTI  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6023  VLVNVTE  6043
             VL+ V E
Sbjct  511   VLISVNE  517


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  375  LILPRLIL  352
            LIL  L L
Sbjct  643  LILAPLLL  650


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4847  RMEEKEI  4867
             RM+  EI
Sbjct  708   RMDSSEI  714


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5377  MEPVDP  5394
             ME  DP
Sbjct  833   METLDP  838


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2735  VPTSTD  2718
             +P STD
Sbjct  862   IPISTD  867


>ref|NP_005067.1|  contactin-2 precursor [Homo sapiens]
Length=1040

 GENE ID: 6900 CNTN2 | contactin 2 (axonal) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  9028  LGSGEPSDP  9054
             LG GEPS P
Sbjct  691   LGTGEPSGP  699


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  939  LTFAWLLD  916
            LTF W LD
Sbjct  540  LTFTWTLD  547


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -1

Query  8452  RSRDAAPT-----LSAAGSA  8408
             R R+AAP      LS  G A
Sbjct  704   RTREAAPSVAPSGLSGGGGA  723


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  3608  IIQAQPD  3628
             I+QAQP+
Sbjct  322   IVQAQPE  328


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8412  EPAADRV  8432
             E AADRV
Sbjct  858   EAAADRV  864


 Score = 18.0 bits (35),  Expect(2) =  2836
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9174  SRQALLR  9154
             SR+A LR
Sbjct  122   SREAILR  128


 Score = 18.0 bits (35),  Expect(2) =  2836
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9095  QRDPVQA  9075
             +RDPV A
Sbjct  139   ERDPVKA  145


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +2

Query  2303  KWRKLVD  2323
             KWRK VD
Sbjct  272   KWRK-VD  277


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1057  VPFRN  1071
             VPFRN
Sbjct  936   VPFRN  940


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2780  WMGYE  2794
             WM YE
Sbjct  678   WMDYE  682


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  3836  AMASDFNLPPV  3868
             A+A DF L PV
Sbjct  414   ALAPDFRLNPV  424


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  8905  RLSNLHSNT  8879
             R S LH NT
Sbjct  874   RVSGLHPNT  882


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3697  MGTSTQR  3717
             MGT T R
Sbjct  1     MGTATRR  7


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8199  VLLAC  8213
             VLLAC
Sbjct  57    VLLAC  61


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1471  REAIL  1485
             REAIL
Sbjct  123   REAIL  127


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +2

Query  7256  VAPTK--AK  7276
             VAPTK  AK
Sbjct  814   VAPTKVWAK  822


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  3545  LALQDSGL  3568
             L L+DSG+
Sbjct  385   LSLEDSGM  392


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  6610  IVREIDRSN  6584
             I+R I RS+
Sbjct  474   IIRNISRSD  482


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5427  LTSWM  5413
             LT WM
Sbjct  675   LTPWM  679


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8733  ALVCSSA  8713
             ALV SSA
Sbjct  18    ALVSSSA  24


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  89   SRQALLR  69
            SR+A LR
Sbjct  122  SREAILR  128


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/19 (36%), Positives = 7/19 (36%), Gaps = 11/19 (57%)
 Frame = +2

Query  5345  NRR-----------YSTEE  5368
             NRR           YS EE
Sbjct  792   NRRGDGPESLTALVYSAEE  810


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6264  MLVLI  6250
             ML+LI
Sbjct  1031  MLILI  1035


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6370  HYTGLS  6387
             HY GLS
Sbjct  160   HYPGLS  165


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4217  QGVVESMNKE  4246
             Q VV+S  KE
Sbjct  590   QTVVDSASKE  599


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1757  EAGADR  1774
             EA ADR
Sbjct  858   EAAADR  863


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8546  KTHLLL  8529
             K HLLL
Sbjct  8     KPHLLL  13


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  26   SLGALWLTREPT  61
            SL   W T EPT
Sbjct  279  SLSPQWTTAEPT  290


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  9111  SLGALWLTREPT  9146
             SL   W T EPT
Sbjct  279   SLSPQWTTAEPT  290


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  6690  SVSREDQG  6713
             SVS ED+G
Sbjct  295   SVSFEDEG  302


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8170  TVLESGTKE  8196
             TV +S  KE
Sbjct  591   TVVDSASKE  599


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5144  APSVA  5130
             APSVA
Sbjct  709   APSVA  713


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5573  KLLYQ  5587
             K+LYQ
Sbjct  948   KMLYQ  952


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  2341  ENSRLLGSSI  2370
             E+ RL   SI
Sbjct  232   EDTRLFAPSI  241


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7023  HGRVIV  7006
             +GR+IV
Sbjct  318   QGRIIV  323


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2783  SKGMEVL  2763
             SKG E+L
Sbjct  453   SKGTEIL  459


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5018  STILGT  5035
             S ILGT
Sbjct  688   SNILGT  693


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2790  MNSIL  2804
             MN IL
Sbjct  840   MNGIL  844


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5116  PRRP  5127
             PRRP
Sbjct  912   PRRP  915


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7657  HPGRVI  7640
             HPG VI
Sbjct  1020  HPGTVI  1025


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4684  PETYIW  4667
             P TY W
Sbjct  68    PATYRW  73


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  485  VRNIRR  502
            +RNI R
Sbjct  475  IRNISR  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1629  NFLGK  1643
             NF+GK
Sbjct  492   NFMGK  496


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5186  NEAVR  5200
             NE VR
Sbjct  775   NESVR  779


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4793  LGSAYRRK  4816
             +G A RRK
Sbjct  1     MGTATRRK  8


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  797  MGKSSRR  817
            MG   RR
Sbjct  1    MGTATRR  7


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3769  FPDSSTD  3749
             FP+ ST+
Sbjct  48    FPEESTE  54


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2128  IKARNGW  2148
             +KA  GW
Sbjct  143   VKAHEGW  149


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7917  DNGEYPCL  7894
             D G Y CL
Sbjct  201   DLGNYSCL  208


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  943  RPSMRKLQNG  972
            RP  R L NG
Sbjct  355  RPTVRWLRNG  364


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8288  IRHIPR  8305
             IR I R
Sbjct  475   IRNISR  480


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6305  LDIIPID  6325
             LD  PID
Sbjct  546   LDDFPID  552


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  939  KETI  950
            KETI
Sbjct  566  KETI  569


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  396  LRPGGK  413
            LR GGK
Sbjct  579  LRHGGK  584


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5985  CVAQT  5971
             C AQT
Sbjct  587   CMAQT  591


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7944  GDPTGP  7961
             G+P GP
Sbjct  694   GEPSGP  699


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1136  DYPSFI  1119
             ++P FI
Sbjct  172   EFPNFI  177


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  4002  ATRITF-PS  3979
             AT IT  PS
Sbjct  508   ATKITLAPS  516


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3053  DPSKDL  3070
             DP  DL
Sbjct  535   DPTMDL  540


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4736  SWMRAF  4719
             SW R F
Sbjct  627   SWSRGF  632


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4787  NILG  4798
             NILG
Sbjct  689   NILG  692


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1358  YTRRND  1375
             Y RR D
Sbjct  791   YNRRGD  796


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2552  IPVEAH  2535
             IP E H
Sbjct  994   IPAEVH  999


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/7 (42%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  4712  MSIKPSP  4692
             M + P P
Sbjct  1013  MAVRPAP  1019


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1375  IISSSVA  1355
             +IS SVA
Sbjct  1024  VISHSVA  1030


>sp|P30508.2|1C12_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-12 alpha 
chain; AltName: Full=MHC class I antigen Cw*12; Flags: 
Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  8960  AVLEVLRMQLSGHVM  8916
             AVL VL     G VM
Sbjct  319   AVLAVL-----GAVM  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  7302  EQW  7310
             EQW
Sbjct  178   EQW  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  179  QWR  187
            QWR
Sbjct  179  QWR  181


>emb|CAB59385.1|  T cell receptor beta chain variable region [Homo sapiens]
Length=88


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  29    IYYSQIV--NDFQK  40


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  26    LR-----LIYYSQIV  35


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  51    REKKE  55


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  35    VNDFQK  40


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  48    SVSRE  52


>ref|NP_775494.1|  protein SSX7 [Homo sapiens]
Length=188

 GENE ID: 280658 SSX7 | synovial sarcoma, X breakpoint 7 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  3910  KRRSHAWTSRL  3942
             KR  HAWT RL
Sbjct  158   KRGKHAWTHRL  168


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7643  DSKSVPE  7623
             DSK VPE
Sbjct  122   DSKGVPE  128


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  5493  YE--TNLAMKATL  5461
             YE  T L  KATL
Sbjct  55    YEAMTKLGFKATL  67


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +1

Query  5119  RRPRATEGA  5145
             RRPRA  GA
Sbjct  9     RRPRA--GA  15


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/27 (37%), Positives = 11/27 (40%), Gaps = 14/27 (51%)
 Frame = +2

Query  2159  KQWPLTEEKIKALVEICTEMEKEGKIS  2239
             K+W    EK K L E         KIS
Sbjct  35    KEW----EKMKSL-E---------KIS  47


 Score = 17.6 bits (34),  Expect(2) =  8938
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  7630  TDLESHDLD  7656
             TDL+  D D
Sbjct  77    TDLQGNDFD  85


 Score = 17.2 bits (33),  Expect(2) =  8938
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7619  KSLEQI  7636
             KSLE I
Sbjct  41    KSLEKI  46


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6739  RKYETST  6759
             RKYE  T
Sbjct  53    RKYEAMT  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2286  FMANTG  2269
             FM NTG
Sbjct  70    FMHNTG  75


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  9093  ERPSTGKKQLLI  9058
             ER     KQL I
Sbjct  170   ER-----KQLVI  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8579  DLQG  8590
             DLQG
Sbjct  78    DLQG  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  400  LNRIF  386
            L RIF
Sbjct  104  LQRIF  108


>emb|CAC03763.1|  T-cell receptor beta chain [Homo sapiens]
Length=77


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  15    IYYSQIV--NDFQK  26


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  12    LR-----LIYYSQIV  21


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  37    REKKE  41


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  21    VNDFQK  26


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  34    SVSRE  38


>sp|Q29960.1|1C16_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-16 alpha 
chain; AltName: Full=MHC class I antigen Cw*16; Flags: 
Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


>ref|NP_000557.1|  high affinity immunoglobulin gamma Fc receptor I precursor [Homo 
sapiens]
 sp|P12314.2|FCGR1_HUMAN  RecName: Full=High affinity immunoglobulin gamma Fc receptor 
I; Short=IgG Fc receptor I; AltName: Full=Fc-gamma RIA; Short=FcgammaRIa; 
AltName: Full=Fc-gamma RI; Short=FcRI; AltName: 
CD_antigen=CD64; Flags: Precursor
Length=374

 GENE ID: 2209 FCGR1A | Fc fragment of IgG, high affinity Ia, receptor (CD64)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND GEY C
Sbjct  78    NDSGEYRC  85


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +2

Query  5873  WVTVYYGVPVWKEATTTLFC  5932
             WV V+       E T TL C
Sbjct  30    WVSVF------QEETVTLHC  43


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8327  FPSPVL  8310
             FP PVL
Sbjct  189   FPAPVL  194


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4041  ITSASI  4024
             ITSAS+
Sbjct  72    ITSASV  77


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  146  EGSLVT  129
            EG LVT
Sbjct  204  EGNLVT  209


 Score = 16.8 bits (32),  Expect(2) = 16212
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  297  VLTSRR  280
            +LT RR
Sbjct  247  ILTARR  252


 Score = 16.3 bits (31),  Expect(2) = 16212
 Identities = 8/25 (32%), Positives = 8/25 (32%), Gaps = 15/25 (60%)
 Frame = -1

Query  484  RPGLTANRSSSLLAHTICFNLYFFF  410
            RPGL                LYF F
Sbjct  220  RPGL---------------QLYFSF  229


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +2

Query  8717  ELHTRARGQISTDLWMVLQAS  8779
             E H   RG      W+ LQ S
Sbjct  99    EIH---RG------WLLLQVS  110


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  770  LMYHLPLDVLHYR  732
            L Y    +VL YR
Sbjct  131  LVY----NVLYYR  139


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  3692  LAWVPAHKGIGGNEQVD  3742
             L WVP       + QVD
Sbjct  8     LLWVPV------DGQVD  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6536  STQLLLNG  6559
             STQ  LNG
Sbjct  53    STQWFLNG  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5442  TSSFRLTS  5419
             T S+R TS
Sbjct  67    TPSYRITS  74


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3916  RSHAW  3930
             R HAW
Sbjct  123   RCHAW  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -1

Query  4672  IWCFTKLFHVL  4640
             +W     FHVL
Sbjct  289   VW-----FHVL  294


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1155  LFYL  1144
             LFYL
Sbjct  294   LFYL  297


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  3144  KQENMQE*GV  3173
             K+E +QE GV
Sbjct  357   KEEQLQE-GV  365


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +2

Query  6332  TTSYKLTSCNTSV  6370
             T SY  TS   SV
Sbjct  67    TPSYRITS--ASV  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7004  DTITLPC  7024
             +T+TL C
Sbjct  37    ETVTLHC  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -3

Query  1070  FLKG----TSSSCY-VTS  1032
             FL G    TS   Y +TS
Sbjct  57    FLNGTATQTSTPSYRITS  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3138  FLNG  3127
             FLNG
Sbjct  57    FLNG  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1944  ELEVL  1958
             EL+VL
Sbjct  277   ELQVL  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2096  ENLKC  2082
             E LKC
Sbjct  349   EELKC  353


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2756  HQKEP  2770
             H KEP
Sbjct  366   HRKEP  370


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  2954  WFL  2946
             WFL
Sbjct  56    WFL  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3843  LVILTC  3860
             LV L C
Sbjct  207   LVTLSC  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7167  RSSDLE  7184
             RS +LE
Sbjct  272   RSPELE  277


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  8954  LEVLRMQL  8931
             L+VL +QL
Sbjct  278   LQVLGLQL  285


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7661  WDREI  7675
             WD EI
Sbjct  323   WDLEI  327


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1056  STLQE  1070
             S LQE
Sbjct  339   SSLQE  343


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7287  CREKKEQ  7307
             C E KE+
Sbjct  353   CQEQKEE  359


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7339  QEPKEQ  7322
             QE KE+
Sbjct  354   QEQKEE  359


>emb|CAB46475.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=110


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  52   DVSNRPSGVSNR  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  42    PGK---------APKLMIYDVSNRPSGVSNRFS  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


>ref|NP_002116.2|  major histocompatibility complex, class II, DR beta 5 precursor 
[Homo sapiens]
Length=266

 GENE ID: 3127 HLA-DRB5 | major histocompatibility complex, class II, DR beta 5
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  227   KMLSGVGGFV  236


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  3080  IQKQGQGQWTYQ  3115
             IQ    G WT+Q
Sbjct  177   IQN---GDWTFQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  228   MLSGVG  233


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2035  YTCQ  2046
             YTCQ
Sbjct  200   YTCQ  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5306  LFIHFQN  5326
             LFI F N
Sbjct  246   LFIYFKN  252


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1026  VLSSGLVQ  1003
             V S GL+Q
Sbjct  171   VVSTGLIQ  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  219  AQSESA--Q--SKMLSGVGG  234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T + LV+LE
Sbjct  183   TFQTLVMLE  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGL +
Sbjct  235   FVLGLLF  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6627  TIMVL  6613
             T MVL
Sbjct  18    TLMVL  22


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8766  TIQRSVD  8746
             T+QR V+
Sbjct  119   TVQRRVE  125


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6694  YPERT  6708
             YP RT
Sbjct  131   YPART  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4930  FQTL  4941
             FQTL
Sbjct  184   FQTL  187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7671  KLTIT  7685
             KLT+T
Sbjct  14    KLTVT  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  87    AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  87  AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  122   RRVEP  126


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  894  MLNTV  908
            ML TV
Sbjct  189  MLETV  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             +Y C V H
Sbjct  199   VYTCQVEH  206


>sp|Q14258.1|TRI25_HUMAN  RecName: Full=E3 ubiquitin/ISG15 ligase TRIM25; AltName: Full=Ubiquitin/ISG15-conjugating 
enzyme TRIM25; AltName: Full=Tripartite 
motif-containing protein 25; AltName: Full=Zinc finger 
protein 147; AltName: Full=Estrogen-responsive finger protein; 
AltName: Full=RING finger protein 147
Length=630

 GENE ID: 7706 TRIM25 | tripartite motif-containing 25 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = -1

Query  526  SCPSICLQP  500
            SC SICL+P
Sbjct  12   SC-SICLEP  19


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4940  CYKKG  4954
             CYKKG
Sbjct  506   CYKKG  510


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2354  FWEVQL  2371
             +WEV+L
Sbjct  513   YWEVEL  518


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  4986  EYQAGHNKV  5012
             +Y   HNKV
Sbjct  462   DYNTAHNKV  470


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = -2

Query  6063  FF------H-MLKFSVTFT  6028
             FF      H M KF V FT
Sbjct  590   FFAVADKVHLMYKFRVDFT  608


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 4/12 (33%)
 Frame = +3

Query  5376  NGASRS*TRALE  5411
             NGAS    RAL+
Sbjct  214   NGAS----RALD  221


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -1

Query  496  DVSNRPG---LTANR  461
            DV NR     +TANR
Sbjct  222  DVRNRQQDVRMTANR  236


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  5178  SLRMKLLDIFL  5210
             SL  K L+ FL
Sbjct  435   SLKAKVLETFL  445


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  6718  ICYNRKNR  6741
             ICY   NR
Sbjct  528   ICYGSMNR  535


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  866  RSHPTRF  886
            R HP RF
Sbjct  489  RPHPQRF  495


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  8676  DQGYLVFF  8653
             D+G+ +FF
Sbjct  584   DHGFVIFF  591


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6959  NSTWSTEGS  6985
             N TW  +GS
Sbjct  38    NETWAVQGS  46


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6023  VLVNVTENF  6049
             VL NV E F
Sbjct  68    VLCNVVEQF  76


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5820  HLHPH  5806
             HL+PH
Sbjct  130   HLQPH  134


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = +1

Query  7798  KLAVVYKIIHNDSR  7839
             KL V Y  I   SR
Sbjct  205   KLTVMYSQINGASR  218


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  8171  QYWSQEL-KN  8197
             +YW  EL KN
Sbjct  512   HYWEVELQKN  521


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  984  DALYP  970
            +ALYP
Sbjct  609  EALYP  613


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9129  LTREPTA  9149
             L REP A
Sbjct  81    LAREPPA  87


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  7152  ATMSPRSSDLE  7184
             A +S  S DLE
Sbjct  189   ASLSQASADLE  199


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6167  DLKND  6181
             DLKN+
Sbjct  343   DLKNE  347


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  3317  ATWIPEWEFVNT  3352
             A W  EW F NT
Sbjct  547   ASWCVEW-F-NT  556


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  5824  APSPPPSPQV  5795
             A  P P  QV
Sbjct  96    ASAPSPNAQV  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2696  KIEELRQ  2716
             K+E+L Q
Sbjct  237   KVEQLQQ  243


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4717  MKAL  4728
             MKAL
Sbjct  248   MKAL  251


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4924  TVFQTLL  4944
             T++Q LL
Sbjct  276   TIYQILL  282


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  44  LTREP  58
           L REP
Sbjct  81  LAREP  85


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8139  HPLRP  8125
             HPL P
Sbjct  143   HPLQP  147


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8382  PTVRERMRR  8408
             P VR+ +RR
Sbjct  147   PPVRDLLRR  155


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6090  SSCIC  6076
             S CIC
Sbjct  172   SECIC  176


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8689  THKAT  8703
             THK T
Sbjct  373   THKST  377


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  3798  ALSIPSKNSTF  3766
             AL  PSK  TF
Sbjct  398   AL--PSKLPTF  406


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6254  STSIRGKV  6277
             STS   KV
Sbjct  433   STSLKAKV  440


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  504  CRQILG  521
            C Q+LG
Sbjct  498  CSQVLG  503


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5303  VVAEFL  5286
             VV +FL
Sbjct  72    VVEQFL  77


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  483  LLETSE  500
            LL+ SE
Sbjct  251  LLDASE  256


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2591  KILEPF  2608
             K+LE F
Sbjct  439   KVLETF  444


>ref|NP_004922.1|  T-cell surface glycoprotein CD8 beta chain isoform 5 precursor 
[Homo sapiens]
Length=210

 GENE ID: 926 CD8B | CD8b molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIYWL
Sbjct  51    RIYWL  55


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 7/15 (46%)
 Frame = -1

Query  3838  CSPITVIFLMFILGL  3794
             CSPIT       LGL
Sbjct  168   CSPIT-------LGL  175


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  168  STLTKRV  148
            STL KRV
Sbjct  148  STLKKRV  154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -1

Query  8446  RDAAPTLSAAGSARLILSLT  8387
             RDA          R IL LT
Sbjct  94    RDAS---------RFILNLT  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  337  WVRERQ  354
            W R+RQ
Sbjct  54   WLRQRQ  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5358  RQRRAR  5375
             R RRAR
Sbjct  196   RRRRAR  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5207  PRIWL  5221
             PR WL
Sbjct  3     PRLWL  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7823  FIMIVG  7840
             F MIVG
Sbjct  115   FCMIVG  120


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = +3

Query  7590  LC----LGMLV-GV  7616
             LC    LG+LV GV
Sbjct  167   LCSPITLGLLVAGV  180


 Score = 17.2 bits (33),  Expect(2) = 24432
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8656  EDKISL  8673
             E KISL
Sbjct  42    EAKISL  47


 Score = 15.5 bits (29),  Expect(2) = 24432
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8784  VEPDKI  8801
             VE +KI
Sbjct  85    VEQEKI  90


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  67    HEFLAL  72


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7168  LGLIVA  7151
             LGL VA
Sbjct  173   LGLLVA  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5191  FILKL  5177
             FIL L
Sbjct  99    FILNL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5028  SIVEILP  5008
             S+V+ LP
Sbjct  133   SVVDFLP  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9035  LPSPAQAT  9012
             LP  AQ T
Sbjct  138   LPTTAQPT  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7961  RACRVP  7944
             R CR P
Sbjct  153   RVCRLP  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2691  LCCPI  2677
             LC PI
Sbjct  167   LCSPI  171


>ref|NP_037483.1|  T-box transcription factor TBX21 [Homo sapiens]
Length=535

 GENE ID: 30009 TBX21 | T-box 21 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5117  PEDQGP  5134
             PEDQGP
Sbjct  468   PEDQGP  473


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3287  MFPF  3276
             MFPF
Sbjct  166   MFPF  169


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4518  APSPF  4504
             APSPF
Sbjct  517   APSPF  521


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1333  IVLQS  1319
             IVLQS
Sbjct  258   IVLQS  262


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  5236  LP*AMEPNP  5210
             LP  MEP P
Sbjct  454   LP--MEPGP  460


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  836  SDTHVF  853
            S+TH+F
Sbjct  287  SNTHIF  292


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7514  PGFLPGA  7494
             P FLP A
Sbjct  406   PAFLPSA  412


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5908  LPHRYPI  5888
             LP  YP+
Sbjct  359   LPNQYPV  365


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1302  PTRFL  1288
             P RFL
Sbjct  68    PSRFL  72


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6017  EVVLVN  6034
             +VVLV+
Sbjct  188   DVVLVD  193


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  2733  DLPHQTKNI  2759
             DLP Q K++
Sbjct  372   DLPGQAKDV  380


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  160  QCGK  171
            QCGK
Sbjct  206  QCGK  209


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1677  FLQSRPEPT  1703
             FL S P PT
Sbjct  408   FLPSAPGPT  416


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7510  PGCG  7521
             PGCG
Sbjct  6     PGCG  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2436  HIFQF  2450
             HIF F
Sbjct  290   HIFTF  294


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5545  FVAVSA  5528
             F+AV A
Sbjct  299   FIAVTA  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5812  PPSPQ  5798
             PP PQ
Sbjct  78    PPRPQ  82


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  1379  SMSGSR  1396
             SM G R
Sbjct  213   SMPGNR  218


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  1581  ISNSPF  1564
             I N PF
Sbjct  315   IDNNPF  320


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  289  QSPPL  275
            Q PPL
Sbjct  471  QGPPL  475


>emb|CAB76467.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=114


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -1

Query  496  DVSNRPGLTANR  461
            DVSNRP    NR
Sbjct  52   DVSNRPSGVSNR  63


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VSNR
Sbjct  57   PSGVSNR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  42    PGK---------APKLMIYDVSNRPSGVSNRFS  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  2838  SGS-----TIGCT  2815
             SGS     TI CT
Sbjct  11    SGSPGQSITISCT  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  76    TISGLQAED  84


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N F GSK
Sbjct  62    NRFSGSK  68


>sp|P30499.1|1C01_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-1 alpha 
chain; AltName: Full=MHC class I antigen Cw*1; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect(2) =  3104
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 16.3 bits (31),  Expect(2) =  3104
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  6690  SVSREDQGE  6716
             SVSR   GE
Sbjct  35    SVSRPGRGE  43


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FISVGY  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  3046  HSMYWFF  3026
             HSM  FF
Sbjct  27    HSMKYFF  33


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  43    EPRFISVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  46    FISVGYVD  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4202  YNPQSQ  4219
             YN Q Q
Sbjct  91    YNRQAQ  96


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


>sp|P24394.1|IL4RA_HUMAN  RecName: Full=Interleukin-4 receptor subunit alpha; Short=IL-4 
receptor subunit alpha; Short=IL-4R subunit alpha; Short=IL-4R-alpha; 
Short=IL-4RA; AltName: CD_antigen=CD124; Contains: 
RecName: Full=Soluble interleukin-4 receptor subunit alpha; 
Short=Soluble IL-4 receptor subunit alpha; Short=Soluble 
IL-4R-alpha; Short=sIL4Ralpha/prot; AltName: Full=IL-4-binding 
protein; Short=IL4-BP; Flags: Precursor
Length=825

 GENE ID: 3566 IL4R | interleukin 4 receptor [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -1

Query  7504  CLELLDAP-DCE  7472
             C EL +AP +CE
Sbjct  361   CVELFEAPVECE  372


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 5/15 (33%)
 Frame = +3

Query  7359  WAQPQ*R*RYRPDNY  7403
             W  P     Y PDNY
Sbjct  143   WSNP-----YPPDNY  152


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7646  TTWMEW  7663
             TTW EW
Sbjct  210   TTWSEW  215


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 10/23 (43%)
 Frame = -1

Query  5839  PKE----------HGAPSPPPSP  5801
             PKE          H  PSPP SP
Sbjct  453   PKEAPPWGKEQPLHLEPSPPASP  475


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8517  EAQEEEEV  8540
             E +EEEEV
Sbjct  370   ECEEEEEV  377


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = -3

Query  5837  QG----AWCP--IS  5814
             QG    AWCP  IS
Sbjct  334   QGSGKSAWCPVEIS  347


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  7070  LLFLLSA--TC  7044
             L FLLS   TC
Sbjct  64    LVFLLSEAHTC  74


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3566  IPNPA  3552
             IPNPA
Sbjct  266   IPNPA  270


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  6953  W---FNSTWS  6973
             W   +N TWS
Sbjct  204   WAQCYNTTWS  213


 Score = 17.6 bits (34),  Expect(2) =  8306
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4517  AVVIQD  4534
             A++IQD
Sbjct  276   AIIIQD  281


 Score = 16.3 bits (31),  Expect(2) =  8306
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 3/11 (27%)
 Frame = +2

Query  4370  RIVDIIATDIQ  4402
             R V II   IQ
Sbjct  273   RLVAII---IQ  280


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  671  EKSTASSS  694
            EKS  SSS
Sbjct  787  EKSKSSSS  794


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8670  LDLW  8681
             LDLW
Sbjct  101   LDLW  104


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7293  LCTTLLF  7273
             LC  LLF
Sbjct  4     LCSGLLF  10


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  881  LWGGSF  864
            LW GSF
Sbjct  110  LWKGSF  115


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8135  PCVPE  8121
             PCVP+
Sbjct  531   PCVPQ  535


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5815  PPPSPQ  5798
             PP SPQ
Sbjct  661   PPRSPQ  666


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8316  CLILL  8302
             CL+LL
Sbjct  14    CLVLL  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3119  YQEPF  3133
             Y EPF
Sbjct  225   YREPF  229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5827  HAPWD  5841
             H PWD
Sbjct  442   HMPWD  446


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3930  PCMASP  3913
             P MASP
Sbjct  737   PVMASP  742


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  555  ELRSLY  572
            ELR LY
Sbjct  57   ELRLLY  62


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = +1

Query  8446  ETWKNMEQ  8469
             ETW   EQ
Sbjct  548   ETW---EQ  552


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7507  SCLELL  7490
             SCL LL
Sbjct  13    SCLVLL  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5790  ISTC  5801
             ISTC
Sbjct  41    ISTC  44


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5349  LFCYV  5335
             L CYV
Sbjct  249   LLCYV  253


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7129  INKRWW  7146
             I K WW
Sbjct  258   IKKEWW  263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  1287  TETLLVQNANP  1319
             TET LV   NP
Sbjct  485   TETPLVIAGNP  495


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4869  YISFSSIL  4846
             Y  FSS L
Sbjct  603   YKAFSSLL  610


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 8/17 (47%)
 Frame = +1

Query  154  FSQCGKSL----AVAPE  192
            FS    SL    AV PE
Sbjct  606  FS----SLLASSAVSPE  618


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  528  VAVPVFVYSL  499
            V VP F + L
Sbjct  648  VPVPLFTFGL  657


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1244  SKSRASF  1264
             SKS  SF
Sbjct  789   SKSSSSF  795


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1149  YLIPGLSI  1126
             YL P L I
Sbjct  179   YLEPSLRI  186


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8160  GISY  8171
             GISY
Sbjct  194   GISY  197


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = -2

Query  7113  FDEHLICPLMG  7081
             F++HL   L+G
Sbjct  229   FEQHL---LLG  236


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4188  SCLIP  4174
             SCL P
Sbjct  430   SCLLP  434


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4632  SCLL  4621
             SCLL
Sbjct  430   SCLL  433


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5889  MGYLC  5903
             MG LC
Sbjct  1     MGWLC  5


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8832  LLHPVS  8849
             LL PVS
Sbjct  8     LLFPVS  13


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3923  MHGQVDCS  3946
             M G  +CS
Sbjct  48    MNGPTNCS  55


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2462  DFRKY  2476
             DFR Y
Sbjct  171   DFRIY  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/11 (36%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  5079  SVTKLTEDRWN  5111
             S+TK   + W+
Sbjct  254   SITKIKKEWWD  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7289  QREKR  7303
             Q EKR
Sbjct  286   QWEKR  290


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  290  PVAAP  276
            PV AP
Sbjct  567  PVSAP  571


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8329  PFQAL  8315
             PFQ L
Sbjct  633   PFQDL  637


>sp|P38398.2|BRCA1_HUMAN  RecName: Full=Breast cancer type 1 susceptibility protein; AltName: 
Full=RING finger protein 53
Length=1863

 GENE ID: 672 BRCA1 | breast cancer 1, early onset [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
 Frame = +2

Query  2816  VQPIVLPEKDSWT  2854
             V+PIV  + D WT
Sbjct  1804  VHPIVVVQPDAWT  1816


 Score = 19.7 bits (39),  Expect(2) =   840
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +1

Query  8677  CGSTTHKATSL  8709
             CG  TH A SL
Sbjct  274   CGTNTH-ASSL  283


 Score = 18.5 bits (36),  Expect(2) =   840
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8820  ENTSLL  8837
             EN SLL
Sbjct  286   ENSSLL  291


 Score = 21.8 bits (44),  Expect =   981
 Identities = 10/28 (35%), Positives = 10/28 (35%), Gaps = 12/28 (42%)
 Frame = +2

Query  6182  TNTNSSS------------GRMIMEKGE  6229
             TNT  SS             RM  EK E
Sbjct  276   TNTHASSLQHENSSLLLTKDRMNVEKAE  303


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  6687  ESVSRE  6704
             ESVSRE
Sbjct  1630  ESVSRE  1635


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2862  SLTVQLS  2842
             SL VQLS
Sbjct  151   SLSVQLS  157


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = -1

Query  5314  DKQQLLQNSY  5285
             +K+ LLQN Y
Sbjct  969   NKHGLLQNPY  978


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2526  YLIPGVSLF  2500
             YL  G+SLF
Sbjct  1563  YLESGISLF  1571


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  1806  SLFGNDPSS  1832
             SLF +DP S
Sbjct  1569  SLFSDDPES  1577


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6386  PKVSFE  6403
             PKV FE
Sbjct  897   PKVTFE  902


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  5537  SDEELIRTV  5563
             S EELI  V
Sbjct  1524  SQEELIKVV  1532


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -1

Query  8308  SSRYVAN--SSTSSL  8270
             S R V N  SSTS L
Sbjct  1587  SAR-VGNIPSSTSAL  1600


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6597  LTDLIT  6580
             LT+LIT
Sbjct  1676  LTNLIT  1681


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2139  EWMAQ  2153
             EWM Q
Sbjct  1781  EWMVQ  1785


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  474  NPGLLETS  497
            NP L ETS
Sbjct  144  NPSLQETS  151


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  2914  PWVNLTCPIQ  2885
             PW+ L   IQ
Sbjct  371   PWITLNSSIQ  380


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = +2

Query  2252  ENPYNTP-VFAIK  2287
             +NPY  P  F IK
Sbjct  975   QNPYRIPPLFPIK  987


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1999  TDFYEYLI  1976
             TDF  YLI
Sbjct  1122  TDFSPYLI  1129


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2585  MTKILE  2602
             M KILE
Sbjct  18    MQKILE  23


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7124  LLLTRD  7141
             LLLT D
Sbjct  290   LLLTKD  295


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +3

Query  8853  HGMDDPERE  8879
             H M  PERE
Sbjct  1006  HSMS-PERE  1013


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  2505  MRHQ  2516
             MRHQ
Sbjct  1324  MRHQ  1327


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7560  PQIPRS  7543
             PQIP S
Sbjct  1856  PQIPHS  1861


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1528  SLPQLKHLT  1502
             SLP L H T
Sbjct  470   SLPNLSHVT  478


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  1181  SGHKTRTKG  1207
             SGH   TKG
Sbjct  551   SGHENKTKG  559


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2732  GLTTPDK  2752
             GL TP+K
Sbjct  964   GLITPNK  970


 Score = 15.9 bits (30),  Expect(2) = 17239
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  8919  DEMLG  8905
             DE+LG
Sbjct  390   DELLG  394


 Score = 15.5 bits (29),  Expect(2) = 17239
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8988  KVPCS  8974
             K PCS
Sbjct  357   KLPCS  361


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3385  ERTHSRS  3405
             ER HS S
Sbjct  445   ERVHSKS  451


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5822  PISTPIS  5802
             PIS  IS
Sbjct  586   PISSSIS  592


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4829  QMPV  4818
             QMPV
Sbjct  657   QMPV  660


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
 Frame = -1

Query  8335  QNPFQALSYSSRY-V-ANSSTS  8276
             QNP + LS    + V A+SSTS
Sbjct  1467  QNP-EGLS-ADKFEVSADSSTS  1486


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  6005  PNPQEVVLVNVTEN  6046
             PN     L  VTEN
Sbjct  472   PN-----LSHVTEN  480


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -2

Query  3984  PSKCVQSSC  3958
             P KCV S C
Sbjct  798   PNKCV-SQC  805


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 13/32 (40%)
 Frame = +3

Query  825   FSPEVI------PMFSAL-----SEGATPQDL  887
             FSP  I      PM S       SE  TP DL
Sbjct  1124  FSPYLISDNLEQPMGSSHASQVCSE--TPDDL  1153


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  7603  IP----RHSSGANE  7574
             IP    RHS  A E
Sbjct  1237  IPSQSTRHSTVATE  1250


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2743  TRQKTSE  2763
             T QK SE
Sbjct  1456  TSQKSSE  1462


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/26 (38%), Positives = 12/26 (46%), Gaps = 11/26 (42%)
 Frame = +1

Query  139   DP-SDPFSQCGKSLAVAPEQGPESER  213
             DP SDP S+         +  PES R
Sbjct  1574  DPESDP-SE---------DRAPESAR  1589


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4059  RKQHI  4073
             RK+HI
Sbjct  1670  RKHHI  1674


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6697  PERTRES  6717
             P R RES
Sbjct  1749  PKRARES  1755


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8867  VIHPMQ  8850
             VI  MQ
Sbjct  14    VINAMQ  19


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6915  NSPPQLK  6895
             NSP +LK
Sbjct  113   NSPEHLK  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7276  EKSGAER  7296
             EK  AER
Sbjct  250   EKRAAER  256


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +2

Query  4205  NPQSQGVVESMNKE  4246
             NP     +ES+ KE
Sbjct  569   NP-----IESLEKE  577


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  865  SDNAEN  848
            S+NAE+
Sbjct  741  SNNAED  746


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2314  FSPFS  2300
             F PFS
Sbjct  869   FAPFS  873


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  885   LNTML  899
             LN ML
Sbjct  1080  LNAML  1084


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  259   AHGKRRGA  282
             A+G RRGA
Sbjct  1199  AQGYRRGA  1206


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6167  DLKNDTNT  6190
             DL  +TNT
Sbjct  1305  DLTANTNT  1312


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5171  LEELKN  5188
             LE+L N
Sbjct  1439  LEDLRN  1444


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -3

Query  4880  YL-CAISLF  4857
             YL   ISLF
Sbjct  1563  YLESGISLF  1571


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  298   RTHQSPPLASCRAR  257
             R HQ P     RAR
Sbjct  1744  RNHQGPK----RAR  1753


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3771  TFLIP  3757
             T+LIP
Sbjct  1852  TYLIP  1856


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  988   CMQGLLHQ  1011
             CM  LL Q
Sbjct  47    CMLKLLNQ  54


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3081  YRSRGK  3098
             YR R K
Sbjct  130   YRNRAK  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2220  SISVQIS  2200
             S SVQ S
Sbjct  151   SLSVQLS  157


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7617  LLQLAFQGT  7591
             LLQ   QGT
Sbjct  204   LLQITPQGT  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3070  NSRNTE  3087
             N R+TE
Sbjct  363   NPRDTE  368


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1875  VSNRASF  1855
             VS R SF
Sbjct  863   VSKRQSF  869


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4515  PSPF  4504
             PSPF
Sbjct  1190  PSPF  1193


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5572  DESDCSDELF  5543
             +E  CS  LF
Sbjct  1287  EETKCSASLF  1296


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8812  IKER  8823
             IKER
Sbjct  1723  IKER  1726


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4669  ICMFQ  4683
             IC FQ
Sbjct  90    ICAFQ  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3949  RNMATRL  3969
             RN A RL
Sbjct  131   RNRAKRL  137


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  704  TQQSGQ  721
            T+Q GQ
Sbjct  539  TEQNGQ  544


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6665  PNNNTRKR  6688
             PN  T KR
Sbjct  684   PNEQTSKR  691


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5354  YSTEES  5371
             Y T+ES
Sbjct  777   YGTQES  782


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8541  GFPV  8552
             GFPV
Sbjct  928   GFPV  931


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
 Frame = +3

Query  7917  RFRPTSQPRGDPTG  7958
             RF   SQ RG+ TG
Sbjct  951   RFCLSSQFRGNETG  964


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  3618  HNQIKVNQ  3641
             HN IK  Q
Sbjct  1402  HNLIKLQQ  1409


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1133  YPSFI  1119
             YPS I
Sbjct  1429  YPSII  1433


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +1

Query  193   QGPESERETRGALSTQD  243
             QGP   RE       QD
Sbjct  1747  QGPKRARE------SQD  1757


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2798  HPDKWT  2815
             +PD WT
Sbjct  1811  QPDAWT  1816


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4731  DEGFH  4717
             D GFH
Sbjct  1818  DNGFH  1822


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  4217  QGVVESMNKEL  4249
             Q V+  M K L
Sbjct  12    QNVINAMQKIL  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -2

Query  2685  CPISKSD  2665
             CP  K D
Sbjct  61    CPLCKND  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2856  SMTYR  2870
             SM YR
Sbjct  127   SMGYR  131


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  121  HNRRA  107
            HNR A
Sbjct  318  HNRWA  322


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5898  LCGRKQ  5915
             LC RK+
Sbjct  347   LCERKE  352


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  8146  PQILVESP  8169
             PQI  E P
Sbjct  490   PQIIQERP  497


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8925  PRDEMLGG  8902
             P D ML G
Sbjct  747   PKDLMLSG  754


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2099  ISPIETV  2119
             I P++TV
Sbjct  917   IKPVQTV  923


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3073  SRNTE  3087
             S NTE
Sbjct  1253  SKNTE  1257


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  756   QMVHQAIS  779
             QM HQ  S
Sbjct  1323  QMRHQSES  1330


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  1149  YLIPGLSIF  1123
             YL  G S F
Sbjct  1563  YLESGISLF  1571


>pdb|1KFA|H  Chain H, Crystal Structure Of Fab Fragment Complexed With Gibberellin 
A4
 pdb|1KFA|I  Chain I, Crystal Structure Of Fab Fragment Complexed With Gibberellin 
A4
Length=221


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 3/18 (16%)
 Frame = -2

Query  4065  VSCPVSAGITSASIYPLA  4012
             VS   SA  T  S+YPLA
Sbjct  118   VS---SAKTTPPSVYPLA  132


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +1

Query  3961  TRLYTFRRKSYPGS  4002
             TR YTF    YP S
Sbjct  53    TRGYTF----YPDS  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8697  GYFPD  8711
             GYFP+
Sbjct  151   GYFPE  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5109  SIYPL  5095
             S+YPL
Sbjct  127   SVYPL  131


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7482  QTVSCN  7465
             +TV CN
Sbjct  198   ETVTCN  203


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2362  FPEVLSS  2342
             FP VL S
Sbjct  173   FPAVLQS  179


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  3168  LILAYF  3151
             L L YF
Sbjct  100   LLLDYF  105


>ref|NP_003821.1|  sialic acid-binding Ig-like lectin 5 precursor [Homo sapiens]
Length=551

 GENE ID: 8778 SIGLEC5 | sialic acid binding Ig-like lectin 5 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3716  LCVLVP  3699
             LCVLVP
Sbjct  35    LCVLVP  40


 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  3173  HP-SFLHIFL  3147
             HP  FL+IFL
Sbjct  318   HPLGFLQIFL  327


 Score = 21.8 bits (44),  Expect =   981
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  6759  CACLIFPIFPIV  6724
             C CLIF  F IV
Sbjct  453   CLCLIF--FLIV  462


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  8730  GPGVRYPLTFGW  8765
             GP    PLTF W
Sbjct  173   GP----PLTFSW  180


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +3

Query  81   LP*VL--QVVCARLLCD  125
            LP VL  Q    RLLCD
Sbjct  257  LP-VLEGQAL--RLLCD  270


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  881  LWGGS  867
            LWGGS
Sbjct  10   LWGGS  14


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  7342  SQEPKEQ  7322
             S EPK+Q
Sbjct  530   SREPKDQ  536


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8491  LPMLLVP  8511
             LP+LL P
Sbjct  2     LPLLLLP  8


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5301  NCCLSI  5318
             NC LSI
Sbjct  100   NCSLSI  105


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6032  LPILLL  6015
             LP LLL
Sbjct  2     LPLLLL  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7715  ILQLRSV  7695
             IL+LR V
Sbjct  298   ILELRRV  304


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8213  LNATAI  8230
             LNAT I
Sbjct  288   LNATPI  293


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6356  NLSTYS  6339
             NLS YS
Sbjct  328   NLSVYS  333


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -1

Query  5839  PKEHGAPS  5816
             PK++ APS
Sbjct  533   PKDQEAPS  540


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLL LL
Sbjct  5     LLLPLL  10


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5884  LLWG  5895
             LLWG
Sbjct  9     LLWG  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6626  VQLNTS  6643
             VQLN S
Sbjct  228   VQLNVS  233


 Score = 15.9 bits (30),  Expect(2) = 29306
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5824  APSPPP  5807
             APS PP
Sbjct  271   APSNPP  276


 Score = 15.5 bits (29),  Expect(2) = 29306
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5813  TPIS  5802
             TPIS
Sbjct  291   TPIS  294


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8205  LACSMP  8222
             L CS+P
Sbjct  162   LSCSLP  167


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2905  NLTC  2894
             NLTC
Sbjct  210   NLTC  213


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7949  VPSGLGG  7929
             VP  LGG
Sbjct  437   VPAALGG  443


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1158  LLFYLI  1141
             L F+LI
Sbjct  456   LIFFLI  461


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4386  IMSTI  4372
             IM TI
Sbjct  482   IMGTI  486


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6828  NCSL  6817
             NCSL
Sbjct  100   NCSL  103


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4699  HPLAF  4685
             HPL F
Sbjct  318   HPLGF  322


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5374  LALLC  5360
             +ALLC
Sbjct  447   MALLC  451


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4791  MLLLP  4777
             +LLLP
Sbjct  4     LLLLP  8


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2277  NTGVL  2263
             NTG+L
Sbjct  295   NTGIL  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  8355  WSKSSVI  8375
             W  SS I
Sbjct  391   WANSSLI  397


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4764  GDARL  4778
             GDAR+
Sbjct  106   GDARM  110


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5196  LDIFL  5210
             L IFL
Sbjct  323   LQIFL  327


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6465  VLLLH  6451
             VLLL+
Sbjct  423   VLLLQ  427


>ref|NP_149974.2|  long palate, lung and nasal epithelium carcinoma-associated protein 
1 precursor [Homo sapiens]
Length=484

 GENE ID: 92747 C20orf114 | chromosome 20 open reading frame 114 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  426  LKHIVW  443
            LKHI+W
Sbjct  81   LKHIIW  86


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -1

Query  8425  SAAGSARLILS  8393
             SA G  RL+LS
Sbjct  146   SASGPTRLVLS  156


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  8183  QELKNSAVSLLNATAI  8230
             QELK+      NAT I
Sbjct  42    QELKD-----HNATSI  52


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 2/18 (11%)
 Frame = +3

Query  4119  LTMAAISP--VLRLGPPV  4166
             L  A  SP  VL LGP V
Sbjct  18    LIQATLSPTAVLILGPKV  35


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  8485  QQLPML  8502
             QQLP+L
Sbjct  54    QQLPLL  59


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5291  ILQQL  5305
             ILQQL
Sbjct  52    ILQQL  56


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  694  LTQDT  708
            LTQDT
Sbjct  341  LTQDT  345


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  2322  ISENLIRELK  2351
             I E L  ELK
Sbjct  36    IKEKLTQELK  45


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1940  LSFLV  1926
             LSFLV
Sbjct  173   LSFLV  177


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 8/20 (40%)
 Frame = +3

Query  531  PSLQTGSEELRSLYNTVATL  590
            PS    SE LR L+    TL
Sbjct  367  PS----SEALRPLF----TL  378


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = +2

Query  5441  VPIAIVKSVAFIA  5479
             VP+  VK   F A
Sbjct  446   VPVSLVKALGFEA  458


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  7681  LHKLNTLLN  7707
             LHKL  L N
Sbjct  170   LHKLSFLVN  178


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  948  INEEAAE  968
            INE AA+
Sbjct  324  INEKAAD  330


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1134  ILGLNKI  1154
             IL LN I
Sbjct  396   ILNLNNI  402


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1531  PSLPQL  1514
             PSLP L
Sbjct  190   PSLPNL  195


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/23 (43%), Positives = 13/23 (56%), Gaps = 5/23 (21%)
 Frame = +3

Query  1779  ELYPLTS--LRSLF--GNDPSSQ  1835
             E +P  S  LR LF  G + SS+
Sbjct  364   EVFP-SSEALRPLFTLGIEASSE  385


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  8957  LLTSSLLQGT  8986
             LL   L Q T
Sbjct  13    LLAATLIQAT  22


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = +2

Query  2906  YPGIK--VRQLC---KLL  2944
             YP IK    QL    KLL
Sbjct  236   YPAIKGDTIQLYLGAKLL  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5319  KWINSS  5302
             KW N S
Sbjct  261   KWFNNS  266


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = +2

Query  3728  NEQV-DKLVSAGIRKVL  3775
             NE   DKL S  I K+L
Sbjct  325   NEKAADKLGSTQIVKIL  341


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  5931  VHQMLKHMI  5957
             V   LKH I
Sbjct  77    VNTVLKHII  85


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  250  KPSPASRELL  221
            KPS    ELL
Sbjct  100  KPSANDQELL  109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7535  DQQLL  7549
             DQ+LL
Sbjct  105   DQELL  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2019  VPIAL  2005
             VPI L
Sbjct  221   VPISL  225


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3035  LVLLES  3018
             +VLL+S
Sbjct  303   MVLLDS  308


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1315  TQIV  1326
             TQIV
Sbjct  335   TQIV  338


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7377  VIEA  7366
             VIEA
Sbjct  203   VIEA  206


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8404  LILSL  8390
             LIL L
Sbjct  395   LILNL  399


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4722  FHSDVYKTI  4696
             F+ DV K I
Sbjct  417   FQPDVLKNI  425


>sp|P04222.2|1C03_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-3 alpha 
chain; AltName: Full=MHC class I antigen Cw*3; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  118   IIQRMY  123


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  183   YLEGLC  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  809  YFY  801
            YFY
Sbjct  31   YFY  33


>emb|CAB59384.1|  T cell receptor beta chain variable region [Homo sapiens]
Length=83


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  19    IYYSQIV--NDFQK  30


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  16    LR-----LIYYSQIV  25


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  41    REKKE  45


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  25    VNDFQK  30


>emb|CAC03961.1|  T-cell receptor beta chain [Homo sapiens]
Length=86


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  27    IYYSQIV--NDFQK  38


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  24    LR-----LIYYSQIV  33


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  49    REKKE  53


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  33    VNDFQK  38


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  46    SVSRE  50


>sp|Q8IZJ1.2|UNC5B_HUMAN  RecName: Full=Netrin receptor UNC5B; AltName: Full=Protein unc-5 
homolog B; AltName: Full=Protein unc-5 homolog 2; AltName: 
Full=p53-regulated receptor for death and life protein 1; 
Flags: Precursor
Length=945

 GENE ID: 219699 UNC5B | unc-5 homolog B (C. elegans) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/14 (64%), Positives = 10/14 (71%), Gaps = 2/14 (14%)
 Frame = -3

Query  3806  HLGPYLFHLKIVLS  3765
             +LGPY F  KI LS
Sbjct  850   QLGPYAF--KIPLS  861


 Score = 21.4 bits (43),  Expect(2) =   642
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             ILDLW
Sbjct  906   ILDLW  910


 Score = 17.6 bits (34),  Expect(2) =   642
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8753  DLWMVLQ  8773
             DLW  LQ
Sbjct  908   DLWEALQ  914


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  5344  LLCRHPILKM  5315
             LLCR  IL M
Sbjct  613   LLCRPVILTM  622


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  5979  AQTLCTSVSYAL  5944
             A  LCTS  Y L
Sbjct  701   APALCTSLEYSL  712


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = +1

Query  8017  ERILGTYLGRSAEPVPL  8067
             ER LG YL    EP PL
Sbjct  731   ERTLGGYLV--EEPKPL  745


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  5791  SALVEMG-VEM  5820
             SAL EMG  EM
Sbjct  925   SALEEMGKSEM  935


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1220  LCRPV  1234
             LCRPV
Sbjct  614   LCRPV  618


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  4195  NSLQSPKSR  4221
             NSL  P SR
Sbjct  868   NSLDAPNSR  876


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = +2

Query  5153  EWTLELLEELKNEAV  5197
             EW       LKNE V
Sbjct  186   EW-------LKNEDV  193


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3869  VAKEIVA  3889
             VAK IVA
Sbjct  226   VAKNIVA  232


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2319  TNFLHL  2302
             T FLHL
Sbjct  519   THFLHL  524


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1654  EGQIF  1640
             EGQIF
Sbjct  818   EGQIF  822


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  1761  QEPIDKELYPL  1793
             QEP  KE  PL
Sbjct  157   QEPLGKEV-PL  166


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3720  LEEMNK  3737
             LEEM K
Sbjct  927   LEEMGK  932


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5431  KTACT  5445
             KTACT
Sbjct  292   KTACT  296


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3077  LLLSLLM  3057
             LLL LL+
Sbjct  11    LLLALLL  17


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  4186  LLDSRPPTGGP  4154
             LL  RPP G P
Sbjct  171   LLQCRPPEGVP  181


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7165  GLIVAI  7148
             GL+VAI
Sbjct  379   GLVVAI  384


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7538  QQLLG  7552
             QQLLG
Sbjct  532   QQLLG  536


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/21 (38%), Positives = 8/21 (38%), Gaps = 9/21 (42%)
 Frame = +3

Query  228  SLDAGLGLLKRARQEARGGDW  290
            SLDA            RG DW
Sbjct  869  SLDA---------PNSRGNDW  880


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1807  HSLATT  1824
             HSLA T
Sbjct  799   HSLAST  804


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6407  LAQRIPLDR  6381
             LAQ   +DR
Sbjct  883   LAQKLSMDR  891


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4502  RGALL  4488
             RGALL
Sbjct  8     RGALL  12


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/32 (31%), Positives = 10/32 (31%), Gaps = 18/32 (56%)
 Frame = +2

Query  7583  TTA-----VPWNASWSNKSLEQIWNHTTWMEW  7663
             TTA     V  N  WS            W EW
Sbjct  237   TTATVIVYV--NGGWSS-----------WAEW  255


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 8/20 (40%)
 Frame = -2

Query  4839  LPDPNASLFL-------LYA  4801
             L DPN  L L       LYA
Sbjct  360   LSDPNSHL-LEASGDAALYA  378


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -2

Query  537  GMVVAVPVFV  508
            G+VVA  +FV
Sbjct  379  GLVVA--IFV  386


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8804  FYLIW  8790
             FY IW
Sbjct  779   FYHIW  783


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = +3

Query  2139  EW-M-AQKL  2159
             +W M AQKL
Sbjct  879   DWRMLAQKL  887


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1895  LEEM  1906
             LEEM
Sbjct  927   LEEM  930


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1345  WDQRL  1359
             WD RL
Sbjct  19    WDPRL  23


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4819  TGIWVRE  4839
             TG  VRE
Sbjct  101   TGLRVRE  107


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  1654  EGQIFPKKLAC  1622
             EGQ F K  AC
Sbjct  286   EGQAFQKT-AC  295


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3927  CMASP  3913
             CMA P
Sbjct  326   CMAPP  330


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -2

Query  7305  ALFS--LCTTL  7279
             A F   LCT L
Sbjct  698   AVFAPALCTSL  708


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  8050  AEPVP--LQ  8070
             AEP P  LQ
Sbjct  44    AEPLPYFLQ  52


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  7269  LVGATPNGSI  7240
             LV   PNG I
Sbjct  566   LV---PNGAI  572


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  6245  FNISTSIRGKVQK  6283
             F I  SIR   QK
Sbjct  856   FKIPLSIR---QK  865


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  3855  LKSLAIALQ  3829
             L SLA AL+
Sbjct  920   LNSLASALE  928


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6105  HKLII  6091
             H LII
Sbjct  208   HNLII  212


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  1358  SRWSQC  1341
             S WS C
Sbjct  309   SKWSAC  314


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9044  PQILH  9058
             PQ LH
Sbjct  434   PQLLH  438


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  2887  ELGKSDL  2907
             E+GKS++
Sbjct  929   EMGKSEM  935


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +3

Query  1680  LQSRPEPTAPPE  1715
             LQ R     PPE
Sbjct  172   LQCR-----PPE  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6450  NVIIR  6464
             N IIR
Sbjct  209   NLIIR  213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = -2

Query  4050  SAGITSASIYPL  4015
             SAGI    +Y L
Sbjct  448   SAGIYRGPVYAL  459


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  7712  LQLRSVLSL  7686
             L+LRS  SL
Sbjct  522   LHLRSA-SL  529


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 7/15 (46%)
 Frame = -2

Query  8892  STL-------TLLSP  8869
             STL       T LSP
Sbjct  589   STLPLSEGTQTVLSP  603


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4377  TILSP  4363
             T+LSP
Sbjct  599   TVLSP  603


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7602  MLVGV  7616
             MLV V
Sbjct  935   MLVAV  939


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3500  LTDTTN  3517
             L DT N
Sbjct  217   LSDTAN  222


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  4795  GVCIQEKET  4821
             G C Q K T
Sbjct  351   GLCMQNKKT  359


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5273  LLPKY  5259
             LL KY
Sbjct  770   LLAKY  774


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5773  ESEGEI  5790
             E EG+I
Sbjct  816   EGEGQI  821


>ref|NP_005627.1|  protein SSX4 isoform a [Homo sapiens]
 ref|NP_001030004.1|  protein SSX4 isoform a [Homo sapiens]
Length=188

 GENE ID: 6759 SSX4 | synovial sarcoma, X breakpoint 4 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  3910  KRRSHAWTSRL  3942
             KR  HAWT RL
Sbjct  158   KRGKHAWTHRL  168


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6800  QIASKLREQF  6829
             QI  KLR  F
Sbjct  16    QISEKLRKAF  25


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5119  RRPR  5130
             RRPR
Sbjct  9     RRPR  12


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5117  PEDQGPQ  5137
             PE  GPQ
Sbjct  127   PEASGPQ  133


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +2

Query  2627  IVIYQYM  2647
             IV Y YM
Sbjct  46    IV-YVYM  51


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  400  LNRIF  386
            L RIF
Sbjct  104  LQRIF  108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1683  EENSL  1669
             EEN L
Sbjct  119   EENGL  123


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3560  NPAKLDK  3540
             NP  L+K
Sbjct  144   NPSTLEK  150


>ref|NP_001114.2|  adenosine kinase isoform a [Homo sapiens]
Length=345

 GENE ID: 132 ADK | adenosine kinase [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +3

Query  1275  KNWMTETLLVQNA  1313
             KNWM    LV+ A
Sbjct  154   KNWM----LVEKA  162


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  48  LGNPLL  65
           +GNPLL
Sbjct  12  MGNPLL  17


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  9133  LGNPLL  9150
             +GNPLL
Sbjct  12    MGNPLL  17


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3454  KSRICY  3471
             K R+CY
Sbjct  161   KARVCY  166


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3589  LTICIR  3606
             LT CIR
Sbjct  316   LTECIR  321


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  612  EIKDTKE  632
            E KD KE
Sbjct  237  ETKDIKE  243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  5006  QGRISTILGTSS  5041
             QGR  TI+ T S
Sbjct  266   QGRDDTIMATES  277


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6453  VIIRR  6467
             +IIRR
Sbjct  329   IIIRR  333


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -1

Query  3421  YIEGFCSYYGFFL  3383
             YI       GFFL
Sbjct  166   YIA------GFFL  172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  4986  EYQAG  5000
             EY+AG
Sbjct  59    EYHAG  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -3

Query  8822  LS--FIGLFY  8799
             LS  FI  FY
Sbjct  197   LSAPFISQFY  206


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7006  VTSFSV  6989
             VT F V
Sbjct  279   VTAFAV  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  6044  FLSHL  6030
             FLS+L
Sbjct  306   FLSQL  310


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7572  FPEQP  7558
             FPE P
Sbjct  338   FPEKP  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5165  ELLEEL  5182
             EL +EL
Sbjct  47    ELFDEL  52


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  175  LAVAPE  192
            L V PE
Sbjct  172  LTVSPE  177


>emb|CAB51714.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=124


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 2/17 (11%)
 Frame = -2

Query  2217  ISVQISTNAF--IFSSV  2173
             ISV  S N F  I SSV
Sbjct  69    ISVDTSKNQFFLILSSV  85


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4914  YYFD  4925
             YYFD
Sbjct  104   YYFD  107


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3783  SKNSTFLI  3760
             SKN  FLI
Sbjct  74    SKNQFFLI  81


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7395  LACTVS  7378
             L C VS
Sbjct  20    LTCSVS  25


>ref|NP_002114.3|  HLA class II histocompatibility antigen, DQ beta 1 chain precursor 
[Homo sapiens]
Length=261

 GENE ID: 3119 HLA-DQB1 | major histocompatibility complex, class II, DQ beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  230   KMLSGVGGFV  239


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  3098  GQWTYQI  3118
             G WT+QI
Sbjct  183   GDWTFQI  189


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGLI+
Sbjct  238   FVLGLIF  244


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  7192  ISSSRSEDL  7166
             IS SR E L
Sbjct  133   ISPSRTEAL  141


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9036  TPQSRP  9019
             TPQ RP
Sbjct  83    TPQGRP  88


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1680  LQSRPEPT  1703
             LQ R EPT
Sbjct  123   LQRRVEPT  130


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T ++LV+LE
Sbjct  186   TFQILVMLE  194


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  231   MLSGVG  236


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +3

Query  8610  FLKEKGGLEGLIHSQRRQ  8663
             FL    GL GLI  QR Q
Sbjct  244   FL----GL-GLIIRQRSQ  256


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4707  RHHYE  4721
             RH YE
Sbjct  112   RHNYE  116


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  9015  HASLESP  8995
             H SL+SP
Sbjct  209   HPSLQSP  215


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +3

Query  6357  VTPQSLHRP  6383
             VTPQ   RP
Sbjct  82    VTPQG--RP  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VTDF+
Sbjct  151   VTDFY  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 4/20 (20%)
 Frame = +3

Query  855  ALSEGATPQDLNTMLNTVGG  914
            A SE A  Q    ML  VGG
Sbjct  222  AQSESA--Q--SKMLSGVGG  237


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  1131  IILGLNKIVR  1160
             I LGL  I+R
Sbjct  243   IFLGLGLIIR  252


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  5855  YRSSTSQG  5832
             YR  T QG
Sbjct  79    YRAVTPQG  86


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  240  GLGLLKRAR  266
            GLGL  R R
Sbjct  246  GLGLIIRQR  254


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             I RQR
Sbjct  250   IIRQR  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8403  RRAEP  8417
             RR EP
Sbjct  125   RRVEP  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  538  FRQDQ  552
            FR DQ
Sbjct  164  FRNDQ  168


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  528  QPSLQ  542
            +PSLQ
Sbjct  209  HPSLQ  213


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1681  FRADQ  1695
             FR DQ
Sbjct  164   FRNDQ  168


>emb|CAC03869.1|  T-cell receptor beta chain [Homo sapiens]
Length=68


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  10    IYYSQIV--NDFQK  21


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  7     LR-----LIYYSQIV  16


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  32    REKKE  36


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  16    VNDFQK  21


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  29    SVSRE  33


>ref|NP_005095.1|  bromodomain-containing protein 2 [Homo sapiens]
 ref|NP_001106653.1|  bromodomain-containing protein 2 [Homo sapiens]
Length=801

 GENE ID: 6046 BRD2 | bromodomain containing 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +1

Query  3100  PMDISNLSRAI*KSENR  3150
             PMD S   R   K ENR
Sbjct  393   PMDLSTVKR---KMENR  406


 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2327  RELNKRTQD  2353
             REL KR QD
Sbjct  734   RELEKRLQD  742


 Score = 19.3 bits (38),  Expect(2) =  1296
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  549   REKKE  553


 Score = 18.5 bits (36),  Expect(2) =  1296
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7170  SSDLEEE  7190
             SSD EEE
Sbjct  509   SSDSEEE  515


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 7/23 (30%)
 Frame = -1

Query  5332  HPILK--MD----KQQLLQNSYY  5282
             H I K  MD    K  L +N YY
Sbjct  114   HKIIKQPMDMGTIKRRL-ENNYY  135


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = +2

Query  5528  SGDSDEELIRTVRL  5569
             S DS+EE  R  RL
Sbjct  509   SSDSEEE--RAHRL  520


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6964  TIKPSTIKQL  6935
             T KPST  +L
Sbjct  690   TLKPSTLREL  699


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  450  RELERF  467
            RELER+
Sbjct  697  RELERY  702


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  879  QDLNTM  896
            QD NTM
Sbjct  143  QDFNTM  148


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3349  INKLP  3335
             INKLP
Sbjct  654   INKLP  658


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2369  LGIPHP  2386
             L IPHP
Sbjct  238   LNIPHP  243


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1696  SQQPHQ  1713
             SQQ HQ
Sbjct  334   SQQQHQ  339


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +3

Query  7728  KKRMNKN-YW  7754
             K R+  N YW
Sbjct  127   KRRLENNYYW  136


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1170  PTSILDI  1190
             PT +L+I
Sbjct  234   PTTVLNI  240


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8942  GVLQELL  8962
             G+L ELL
Sbjct  355   GILKELL  361


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 24/42 (57%)
 Frame = +2

Query  4364  GE---RIVDIIATDIQTKE--LQKQITKIQNFRVYYRDSRNP  4474
             GE   R+V I    IQ  E  L              RDS NP
Sbjct  659   GEKLGRVVHI----IQAREPSL--------------RDS-NP  681


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7047  MFIICFI  7027
             MF  C+I
Sbjct  148   MFTNCYI  154


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QEE+E
Sbjct  182   QEEQE  186


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +3

Query  8739  VRYPLTFGWCYK  8774
             VR  L F  CYK
Sbjct  418   VR--LMFSNCYK  427


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6840  LLFPNC  6823
             L+F NC
Sbjct  420   LMFSNC  425


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6002  DPNPQEV  6022
             D NP+E+
Sbjct  678   DSNPEEI  684


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5894  PHNRL  5880
             PHN L
Sbjct  7     PHNKL  11


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5821  PSPPPSPQV  5795
             P  PP P+V
Sbjct  58    PANPPPPEV  66


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7067  AMYAPP  7084
             A+Y PP
Sbjct  225   ALYTPP  230


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  4202  YNPQSQGVVESM  4237
             YNP  + VV  M
Sbjct  428   YNPPDHDVV-AM  438


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8445  RDLEK  8459
             R+LEK
Sbjct  734   RELEK  738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  6002  LWVHRHVWP  5976
             LW H   WP
Sbjct  90    LWKHQFAWP  98


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7491  LMPQT  7477
             LM QT
Sbjct  164   LMAQT  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7134  QEMVV  7148
             QE+VV
Sbjct  185   QELVV  189


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  3214  KNNHRK  3231
             KN H K
Sbjct  193   KNSHKK  198


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  137  EIPQTLL  157
            EIP T L
Sbjct  232  EIPTTVL  238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8870  RVIHPMQA  8847
             RV+H  QA
Sbjct  664   RVVHIIQA  671


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5006  VMSCL  4992
             V+SCL
Sbjct  703   VLSCL  707


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  450  RELE  461
            RELE
Sbjct  734  RELE  737


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3402  PTMGS  3388
             PTM S
Sbjct  46    PTMAS  50


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  57   PLLKPQ*SL  83
            PLLK   SL
Sbjct  249  PLLK---SL  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +1

Query  9142  PLLKPQ*SL  9168
             PLLK   SL
Sbjct  249   PLLK---SL  254


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1170  PTSIL  1184
             PT IL
Sbjct  290   PTAIL  294


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP  P SP
Sbjct  295   APGSPASP  302


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7720  KPARKE  7737
             KP RK+
Sbjct  325   KPPRKD  330


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -2

Query  8244  PSATAMAVALSK  8209
             P  TAM   L K
Sbjct  464   PVSTAMPPGLAK  475


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5758  EDSGNESEGE  5787
             E+S  ES  E
Sbjct  483   EESSSESSSE  492


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8315  QGLERILL  8338
             Q LE I L
Sbjct  167   QTLEKIFL  174


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3629  QSESELV  3649
             Q E ELV
Sbjct  182   QEEQELV  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2946  LRSLH  2932
             L SLH
Sbjct  251   LKSLH  255


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4524  TTAPSP  4507
             TT P P
Sbjct  285   TTTPTP  290


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 4/9 (44%)
 Frame = +2

Query  4934  RL----CYK  4948
             RL    CYK
Sbjct  419   RLMFSNCYK  427


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  7170  SSDLEEE  7190
             SS+ EEE
Sbjct  490   SSEEEEE  496


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2078  QSESTD  2061
             +SES D
Sbjct  506   ESESSD  511


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  5487  TNLAMKAT  5464
             T L  KAT
Sbjct  613   TKLPKKAT  620


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2430  VMHIFQ  2447
             V HI Q
Sbjct  665   VVHIIQ  670


>pdb|1EFX|A  Chain A, Structure Of A Complex Between The Human Natural Killer 
Cell Receptor Kir2dl2 And A Class I Mhc Ligand Hla-Cw3
Length=278


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  51    WVEQEGPEYWDRETQKY  67


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3052  IIHSMY  3035
             II+ MY
Sbjct  94    IIQRMY  99


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  126   LNEDLRSWTA  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  255   QRYTCH  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  22    FIAVGY  27


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  86    NQSE  89


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  159   YLEGLC  164


>emb|CAC03979.1|  T-cell receptor beta chain [Homo sapiens]
Length=78


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  19    IYYSQIV--NDFQK  30


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  16    LR-----LIYYSQIV  25


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  41    REKKE  45


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  25    VNDFQK  30


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  38    SVSRE  42


>ref|NP_742099.1|  T-cell surface glycoprotein CD8 beta chain isoform 3 precursor 
[Homo sapiens]
Length=221

 GENE ID: 926 CD8B | CD8b molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIYWL
Sbjct  51    RIYWL  55


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 7/15 (46%)
 Frame = -1

Query  3838  CSPITVIFLMFILGL  3794
             CSPIT       LGL
Sbjct  168   CSPIT-------LGL  175


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  168  STLTKRV  148
            STL KRV
Sbjct  148  STLKKRV  154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -1

Query  8446  RDAAPTLSAAGSARLILSLT  8387
             RDA          R IL LT
Sbjct  94    RDAS---------RFILNLT  104


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  337  WVRERQ  354
            W R+RQ
Sbjct  54   WLRQRQ  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5358  RQRRAR  5375
             R RRAR
Sbjct  196   RRRRAR  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5207  PRIWL  5221
             PR WL
Sbjct  3     PRLWL  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7823  FIMIVG  7840
             F MIVG
Sbjct  115   FCMIVG  120


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 5/14 (35%)
 Frame = +3

Query  7590  LC----LGMLV-GV  7616
             LC    LG+LV GV
Sbjct  167   LCSPITLGLLVAGV  180


 Score = 17.2 bits (33),  Expect(2) = 24010
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8656  EDKISL  8673
             E KISL
Sbjct  42    EAKISL  47


 Score = 15.5 bits (29),  Expect(2) = 24010
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8784  VEPDKI  8801
             VE +KI
Sbjct  85    VEQEKI  90


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  67    HEFLAL  72


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7168  LGLIVA  7151
             LGL VA
Sbjct  173   LGLLVA  178


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  8065  LQLPPLE  8085
             L L PLE
Sbjct  208   LRLHPLE  214


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5191  FILKL  5177
             FIL L
Sbjct  99    FILNL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5028  SIVEILP  5008
             S+V+ LP
Sbjct  133   SVVDFLP  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9035  LPSPAQAT  9012
             LP  AQ T
Sbjct  138   LPTTAQPT  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7961  RACRVP  7944
             R CR P
Sbjct  153   RVCRLP  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2691  LCCPI  2677
             LC PI
Sbjct  167   LCSPI  171


>sp|Q92637.1|FCGRB_HUMAN  RecName: Full=High affinity immunoglobulin gamma Fc receptor 
IB; Short=IgG Fc receptor IB; AltName: Full=Fc-gamma RIB; Short=hFcgammaRIB; 
Short=FcRIB; Flags: Precursor
Length=280

 GENE ID: 2210 FCGR1B | Fc fragment of IgG, high affinity Ib, receptor (CD64)
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7920  NDNGEYPC  7897
             ND GEY C
Sbjct  78    NDSGEYRC  85


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = +2

Query  5873  WVTVYYGVPVWKEATTTLFC  5932
             WV V+       E T TL C
Sbjct  30    WVSVF------QEETVTLHC  43


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4041  ITSASI  4024
             ITSAS+
Sbjct  72    ITSASV  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +2

Query  8717  ELHTRARGQISTDLWMVLQAS  8779
             E H   RG      W+ LQ S
Sbjct  99    EIH---RG------WLLLQVS  110


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -3

Query  770  LMYHLPLDVLHYR  732
            L Y    +VL YR
Sbjct  131  LVY----NVLYYR  139


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  3692  LAWVPAHKGIGGNEQVD  3742
             L WVP       + QVD
Sbjct  8     LLWVPV------DGQVD  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6536  STQLLLNG  6559
             STQ  LNG
Sbjct  53    STQWFLNG  60


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  5442  TSSFRLTS  5419
             T S+R TS
Sbjct  67    TPSYRITS  74


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3916  RSHAW  3930
             R HAW
Sbjct  123   RCHAW  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 5/11 (45%)
 Frame = -1

Query  4672  IWCFTKLFHVL  4640
             +W     FHVL
Sbjct  195   VW-----FHVL  200


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1155  LFYL  1144
             LFYL
Sbjct  200   LFYL  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  3144  KQENMQE*GV  3173
             K+E +QE GV
Sbjct  263   KEEQLQE-GV  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = +2

Query  6332  TTSYKLTSCNTSV  6370
             T SY  TS   SV
Sbjct  67    TPSYRITS--ASV  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +2

Query  6200  SGRMIMEKGE  6229
             S R  ME GE
Sbjct  110   SSRVFME-GE  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7004  DTITLPC  7024
             +T+TL C
Sbjct  37    ETVTLHC  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 5/18 (27%)
 Frame = -3

Query  1070  FLKG----TSSSCY-VTS  1032
             FL G    TS   Y +TS
Sbjct  57    FLNGTATQTSTPSYRITS  74


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3138  FLNG  3127
             FLNG
Sbjct  57    FLNG  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2096  ENLKC  2082
             E LKC
Sbjct  255   EELKC  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2756  HQKEP  2770
             H KEP
Sbjct  272   HRKEP  276


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  2954  WFL  2946
             WFL
Sbjct  56    WFL  58


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1056  STLQE  1070
             S LQE
Sbjct  245   SSLQE  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7287  CREKKEQ  7307
             C E KE+
Sbjct  259   CQEQKEE  265


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7339  QEPKEQ  7322
             QE KE+
Sbjct  260   QEQKEE  265


>sp|Q9TNN7.1|1C05_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-5 alpha 
chain; AltName: Full=MHC class I antigen Cw*5; Flags: Precursor
Length=366

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  136   GYNQF  140


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  8960  AVLEVLRMQLSGHVM  8916
             AVL VL     G VM
Sbjct  319   AVLAVL-----GAVM  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8984  TFRWG  8998
             T RWG
Sbjct  295   TLRWG  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


>ref|NP_783629.1|  protein SSX2 isoform b [Homo sapiens]
Length=188

 GENE ID: 6757 SSX2 | synovial sarcoma, X breakpoint 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  3910  KRRSHAWTSRL  3942
             KR  HAWT RL
Sbjct  158   KRGEHAWTHRL  168


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  5493  YE--TNLAMKATL  5461
             YE  T L  KATL
Sbjct  55    YEAMTKLGFKATL  67


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2336  NKRTQDF  2356
             NKR +DF
Sbjct  73    NKRAEDF  79


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  5108  EQAPEDQGPQ  5137
             E+ PE  GPQ
Sbjct  124   EEVPEASGPQ  133


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6739  RKYETST  6759
             RKYE  T
Sbjct  53    RKYEAMT  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6167  DLKNDTN  6187
             DL ND N
Sbjct  83    DLDNDPN  89


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  9093  ERPSTGKKQLLI  9058
             ER     KQL I
Sbjct  170   ER-----KQLVI  176


>sp|P02745.2|C1QA_HUMAN  RecName: Full=Complement C1q subcomponent subunit A; Flags: Precursor
Length=245

 GENE ID: 712 C1QA | complement component 1, q subcomponent, A chain
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 3/17 (17%)
 Frame = +2

Query  827  QPRSDTHVFSIIRRSHP  877
            QPR     FS IRR  P
Sbjct  112  QPRP---AFSAIRRNPP  125


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3889  GYYFF  3875
             GYY+F
Sbjct  157   GYYYF  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  8126  GRRGWEALK  8152
             GRRG   LK
Sbjct  40    GRRGRPGLK  48


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  7565  SGKLICTTAVP  7597
             SG  +CT  VP
Sbjct  148   SGRFVCT--VP  156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  4699  GFIDITMKALIQ  4734
             GF D T K L Q
Sbjct  188   GFCDTTNKGLFQ  199


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5866  FCSTTD  5849
             FC TT+
Sbjct  189   FCDTTN  194


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = -1

Query  7204  IVPHISSSR  7178
             IV   SSSR
Sbjct  175   IV---SSSR  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  3157  IFSCFQIF  3134
             +FS F IF
Sbjct  235   VFSGFLIF  242


>ref|NP_060393.1|  E3 ubiquitin-protein ligase MARCH1 isoform 2 [Homo sapiens]
Length=272

 GENE ID: 55016 MARCH1 | membrane-associated ring finger (C3HC4) 1
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = +2

Query  6044  NF-NMWK  6061
             NF NMWK
Sbjct  9     NFLNMWK  15


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +2

Query  7043  NMWQKVGK--AMY  7075
             NMW K  K   MY
Sbjct  12    NMWKK-SKISTMY  23


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8880  VLEWRF  8897
             VLEW F
Sbjct  175   VLEWPF  180


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1543  LAVCPS  1526
             L VCPS
Sbjct  53    LSVCPS  58


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1574  LEMWK  1588
             L MWK
Sbjct  11    LNMWK  15


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +1

Query  2041  CQHNWKKSVDSD  2076
             C H W KS  SD
Sbjct  93    CLHQWIKS--SD  102


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -2

Query  1683  EENSLAFPCR  1654
             EE  L  PCR
Sbjct  72    EESPLITPCR  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  594  CVHQRI  611
            C HQ I
Sbjct  93   CLHQWI  98


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2205  FVQRWKR  2225
             +VQ W R
Sbjct  205   YVQLWRR  211


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5107  GTSPR  5121
             GT PR
Sbjct  44    GTAPR  48


>ref|NP_776213.1|  interleukin-1 receptor antagonist protein isoform 2 [Homo sapiens]
Length=180

 GENE ID: 3557 IL1RN | interleukin 1 receptor antagonist [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6424  CPGWF  6438
             CPGWF
Sbjct  144   CPGWF  148


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6302  KLDIIPID  6325
             K D++PI+
Sbjct  73    KIDVVPIE  80


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4838  SLTQMP  4821
             SLT MP
Sbjct  160   SLTNMP  165


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8755  VSGYLTPGPGV  8723
             V GYL  GP V
Sbjct  59    VAGYL-QGPNV  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +2

Query  7496  LQA-RILAVER---YLKDQQL  7546
             +QA RI  V     YL + QL
Sbjct  38    MQAFRIWDVNQKTFYLRNNQL  58


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2207  CTEME  2221
             CT ME
Sbjct  150   CTAME  154


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8778  VPVEP  8792
             VP+EP
Sbjct  77    VPIEP  81


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1091  ICHPS  1077
             IC PS
Sbjct  27    ICRPS  31


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4430  KIQNFRV  4450
             K Q FR+
Sbjct  37    KMQAFRI  43


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             +LEE I
Sbjct  69    NLEEKI  74


>emb|CAC03939.1|  T-cell receptor beta chain [Homo sapiens]
Length=78


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  20    IYYSQIV--NDFQK  31


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  17    LR-----LIYYSQIV  26


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  42    REKKE  46


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  26    VNDFQK  31


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  39    SVSRE  43


>pdb|1QQD|A  Chain A, Crystal Structure Of Hla-Cw4, A Ligand For The Kir2d 
Natural Killer Cell Inhibitory Receptor
Length=273


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  50    WVEQEGPEYWDRETQKY  66


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  111   GYNQF  115


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  125   LNEDLRSWTA  134


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  254   QRYTCH  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7536  SFRYLST  7516
             S RY ST
Sbjct  3     SMRYFST  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  21    FIAVGY  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6541  STAVKW  6558
             ST V W
Sbjct  8     STSVSW  13


>ref|NP_072049.2|  major histocompatibility complex, class II, DR beta 3 precursor 
[Homo sapiens]
Length=266

 GENE ID: 3125 HLA-DRB3 | major histocompatibility complex, class II, DR beta 3
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  227   KMLSGVGGFV  236


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  4032  QK-LFQQKQGR  4061
             QK L +QK GR
Sbjct  93    QKDLLEQKRGR  103


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1523  QRRAHSQ  1543
             QRR H Q
Sbjct  121   QRRVHPQ  127


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  3080  IQKQGQGQWTYQ  3115
             IQ    G WT+Q
Sbjct  177   IQN---GDWTFQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  228   MLSGVG  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/25 (32%), Positives = 8/25 (32%), Gaps = 14/25 (56%)
 Frame = -2

Query  6627  TIMVLALSVKLTDLITTSSSARLPF  6553
             T MVL              S RL F
Sbjct  18    TLMVL--------------SSRLAF  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5306  LFIHFQN  5326
             LFI F N
Sbjct  246   LFIYFRN  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -2

Query  4161  AALTVAPVKLLPLS  4120
             AALTV    L+ LS
Sbjct  13    AALTVT---LMVLS  23


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  4324  VDEYC-HLY  4301
             VD YC H Y
Sbjct  104   VDNYCRHNY  112


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2035  YTCQ  2046
             YTCQ
Sbjct  200   YTCQ  203


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 11/28 (39%)
 Frame = +3

Query  852  SAL-------SEGATPQDLNTMLNTVGG  914
            SAL       SE A  Q    ML  VGG
Sbjct  211  SALTVEWRARSESA--Q--SKMLSGVGG  234


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1026  VLSSGLVQ  1003
             V S GL+Q
Sbjct  171   VVSTGLIQ  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1482  FRNQ  1493
             FRNQ
Sbjct  250   FRNQ  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1795  LPSGHSLA  1818
             LP G SLA
Sbjct  6     LPGGSSLA  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T + LV+LE
Sbjct  183   TFQTLVMLE  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGL +
Sbjct  235   FVLGLLF  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4930  FQTL  4941
             FQTL
Sbjct  184   FQTL  187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  894  MLNTV  908
            ML TV
Sbjct  189  MLETV  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 0/13 (0%)
 Frame = -2

Query  2865  MSLTVQLSFSGST  2827
             M L   L F G T
Sbjct  20    MVLSSRLAFAGDT  32


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 3/6 (50%), Gaps = 0/6 (0%)
 Frame = -3

Query  9104  WSNQRD  9087
             W  Q D
Sbjct  90    WNSQKD  95


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/6 (50%), Positives = 3/6 (50%), Gaps = 0/6 (0%)
 Frame = -1

Query  19  WSNQRD  2
           W  Q D
Sbjct  90  WNSQKD  95


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QR V
Sbjct  119   TVQRRV  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             +Y C V H
Sbjct  199   VYTCQVEH  206


>emb|CAB51711.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=136


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 10/31 (32%)
 Frame = +2

Query  5858  ATEKLW---------VTVYY-GVPVWKEATT  5920
             A E LW         VT YY G  VW + TT
Sbjct  97    AKEALWFGELLRSFLVTYYYYGMDVWGQGTT  127


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6628  YYYG  6617
             YYYG
Sbjct  115   YYYG  118


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR    NTL
Sbjct  70    ISRDNSKNTL  79


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


>emb|CAC03973.1|  T-cell receptor beta chain [Homo sapiens]
Length=76


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  17    IYYSQIV--NDFQK  28


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  14    LR-----LIYYSQIV  23


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  39    REKKE  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  23    VNDFQK  28


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  36    SVSRE  40


>emb|CAB59423.1|  T cell receptor beta chain variable region [Homo sapiens]
Length=88


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  26    IYYSQIV--NDFQK  37


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  23    LR-----LIYYSQIV  32


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  48    REKKE  52


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  32    VNDFQK  37


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  45    SVSRE  49


>emb|CAC03866.1|  T-cell receptor beta chain [Homo sapiens]
Length=72


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  12    IYYSQIV--NDFQK  23


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  9     LR-----LIYYSQIV  18


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  34    REKKE  38


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7103  CSSNITG  7123
             C S ITG
Sbjct  57    CASSITG  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  18    VNDFQK  23


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  31    SVSRE  35


>ref|NP_059138.1|  toll-like receptor 9 isoform A precursor [Homo sapiens]
 sp|Q9NR96.2|TLR9_HUMAN  RecName: Full=Toll-like receptor 9; AltName: CD_antigen=CD289; 
Flags: Precursor
Length=1032

 GENE ID: 54106 TLR9 | toll-like receptor 9 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 10/14 (71%), Positives = 10/14 (71%), Gaps = 3/14 (21%)
 Frame = -3

Query  1649  PDLP*K--ISLSLS  1614
             P LP K  ISLSLS
Sbjct  139   PALP-KSLISLSLS  151


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 8/19 (42%)
 Frame = -3

Query  3215  FALPLLIV--------LHH  3183
             FAL LL V        LHH
Sbjct  819   FALSLLAVALGLGVPMLHH  837


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  906  LCLAW  892
            LCLAW
Sbjct  849  LCLAW  853


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  1045  AMSLPLGSL  1019
             AM L LG L
Sbjct  21    AMTLALGTL  29


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5864  EKLWVTVY  5887
             E LW  VY
Sbjct  921   ENLWASVY  928


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 2/15 (13%)
 Frame = +2

Query  7433  LLRA--IEAQQHLLQ  7471
             LLRA    AQQ LL+
Sbjct  946   LLRASFLLAQQRLLE  960


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -3

Query  221  LVSLSLS  201
            L+SLSLS
Sbjct  145  LISLSLS  151


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  8189  LKNSAVSLLNA  8221
             LK+S  S LNA
Sbjct  291   LKDSSLSWLNA  301


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  1669  QGIFFR  1686
             +GIFFR
Sbjct  372   HGIFFR  377


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -3

Query  1628  SLSLST--IFHL  1599
             SLSLS   I HL
Sbjct  67    SLSLSSNRIHHL  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = -3

Query  2363  LPRSLEF---SY  2337
             LP SLE+   SY
Sbjct  218   LPSSLEYLLLSY  229


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 10/32 (31%)
 Frame = -2

Query  7581  QMSFPEQPQ--IPRSC*SF---RY--LSTARI  7507
             QM F  Q Q  I R    F   RY  LS  RI
Sbjct  399   QMNFINQAQLGIFR---AFPGLRYVDLSDNRI  427


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/22 (40%), Positives = 11/22 (50%), Gaps = 10/22 (45%)
 Frame = -3

Query  2393  TLRDVVFLIELPRSLEFSY*VL  2328
             TLR+      LP SL+    VL
Sbjct  647   TLRN------LPKSLQ----VL  658


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  269  LPCALQ  252
            LPC LQ
Sbjct  33   LPCELQ  38


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  1794  TSLRSL-F-GN  1820
             TSLR L F GN
Sbjct  598   TSLRALDFSGN  608


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 7/21 (33%)
 Frame = -1

Query  2383  MW-----YS*LNFPEVLSSLI  2336
             MW     Y  L F + LS LI
Sbjct  613   MWAEGDLY--LHFFQGLSGLI  631


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  663  CFALPL  646
            CFAL L
Sbjct  818  CFALSL  823


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6017  LVGWGLW  5997
             L GW LW
Sbjct  838   LCGWDLW  844


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4812  ERDW  4823
             ERDW
Sbjct  910   ERDW  913


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1505  NNLSLVP  1485
             NNL  VP
Sbjct  209   NNLTVVP  215


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -2

Query  5823  PHLHP----HL  5803
             P+LHP    HL
Sbjct  273   PQLHPDTFSHL  283


 Score = 17.6 bits (34),  Expect(2) = 13271
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -2

Query  2310  LHLVLSFFFM  2281
             LH  L F FM
Sbjct  166   LH-ALRFLFM  174


 Score = 15.1 bits (28),  Expect(2) = 13271
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2363  LPRSL  2349
             LP SL
Sbjct  141   LPKSL  145


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1252  ALRVL  1238
             ALRVL
Sbjct  245   ALRVL  249


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7678  QLHKLN  7695
             QL KLN
Sbjct  335   QLRKLN  340


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -2

Query  759  FAPGCSAL*GNF  724
            F P CS L  NF
Sbjct  466  FRPNCSTL--NF  475


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  4878  VDPELADQLIHL  4913
             V PE+  QL HL
Sbjct  487   VQPEMFAQLSHL  498


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2567  LVILS  2553
             LVILS
Sbjct  968   LVILS  972


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  384  EKIRLRPG  407
            EK+ L PG
Sbjct  444  EKVWLQPG  451


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -3

Query  7553  SPGAVDPLGIFPQ  7515
             SPG    L IF Q
Sbjct  792   SPGQLQGLSIFAQ  804


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -3

Query  5135  VALGLLGLVP  5106
             VALG LG VP
Sbjct  826   VALG-LG-VP  833


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 7/14 (50%)
 Frame = +3

Query  1359  TLEEM-------MT  1379
             TLEE+       MT
Sbjct  124   TLEELNLSYNNIMT  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2792  ELHPD  2806
             +LHPD
Sbjct  274   QLHPD  278


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8491  LPML  8502
             LPML
Sbjct  390   LPML  393


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8667  YLVFF  8653
             YL FF
Sbjct  664   YLAFF  668


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  584  NPLLCA  601
            NPL CA
Sbjct  760  NPLHCA  765


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4689  LSLKHT  4672
             LSL HT
Sbjct  148   LSLSHT  153


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  6041  LSHLPILLL  6015
             LSH  IL+L
Sbjct  150   LSHTNILML  158


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  5446  NCYCKKCC  5469
             NCY K  C
Sbjct  177   NCYYKNPC  184


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = -3

Query  5147  VAPSVALGLLGL  5112
             VAP     LLGL
Sbjct  190   VAPGA---LLGL  198


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  2896  CPIQFPH  2876
             CP +FP+
Sbjct  268   CPRHFPQ  274


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  3462  PAFPNLVSL  3436
             P F  LV L
Sbjct  358   PSFGSLVAL  366


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7290  CTTLLFAL  7267
             C TL F L
Sbjct  470   CSTLNFTL  477


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2357  RSLEFS  2340
             R L+FS
Sbjct  601   RALDFS  606


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  839  HFWAE  825
            H WAE
Sbjct  612  HMWAE  616


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 6/21 (28%)
 Frame = +2

Query  8033  LIWDDLRSLCLFSYHRLRDLL  8095
             LIW DL      S  RL  LL
Sbjct  630   LIWLDL------SQNRLHTLL  644


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  5098  SVSFVTLGKGGFIFF  5054
             S+SFV  G     FF
Sbjct  712   SISFVAPG-----FF  721


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2811  HLSGW  2797
             HL GW
Sbjct  837   HLCGW  841


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5461  FYNSN  5447
             FYN N
Sbjct  1020  FYNRN  1024


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +3

Query  6324  IMILPAIS*QVVTPQSL  6374
             IM  PA       P SL
Sbjct  135   IMTVPAL------PKSL  145


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7426  LLLHYTR  7406
             LLL Y R
Sbjct  225   LLLSYNR  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/6 (50%), Positives = 3/6 (50%), Gaps = 0/6 (0%)
 Frame = +2

Query  6953  WFNSTW  6970
             W N  W
Sbjct  298   WLNASW  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  618  LSLSFD  601
            L LSF+
Sbjct  339  LNLSFN  344


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  1499  LSLVPKIASL  1470
             LSL P   SL
Sbjct  354   LSLAPSFGSL  363


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5333  TPNSEN  5316
             TP SE+
Sbjct  460   TPSSED  465


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7491  LMPQT  7477
             L+PQT
Sbjct  643   LLPQT  647


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8954  LEVLRM  8937
             L+VLR+
Sbjct  655   LQVLRL  660


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8012  LVNGSL  8029
             L NGSL
Sbjct  692   LTNGSL  697


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  6828  NC-SLNLLAI  6802
             +C  L LLA+
Sbjct  817   DCFALSLLAV  826


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8380  HPITLL  8363
             HP  LL
Sbjct  9     HPLSLL  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8362  FDHLP  8348
             F HLP
Sbjct  83    FAHLP  87


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 12/32 (37%)
 Frame = -3

Query  341  THLSPSSLR*SKFLAYS--PVAAPRLLPCALQ  252
            THLS         L Y    V  PR LP  L+
Sbjct  202  THLS---------LKYNNLTVV-PRNLPSSLE  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3934  LSMHGFSF  3911
             L MHG  F
Sbjct  369   LDMHGIFF  376


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5310  LSIFR  5324
             L IFR
Sbjct  408   LGIFR  412


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8733  PGVRY  8747
             PG RY
Sbjct  415   PGLRY  419


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 11/29 (37%)
 Frame = +3

Query  8592  AVDLSHFLKEKGGLEGLIHSQRRQDILDL  8678
             AV+ S+FL     L GL   Q    +LDL
Sbjct  511   AVNGSQFL----PLTGL---Q----VLDL  528


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3714  KELEEMN  3734
             KEL E+N
Sbjct  725   KELRELN  731


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8556  PQVPLRPM  8579
             P V L PM
Sbjct  99    PPVGLSPM  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -2

Query  3084  CISAIKSFDG  3055
             CI   K F G
Sbjct  323   CITKTKAFQG  332


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7016  LPCRIK  7033
             LP R+K
Sbjct  784   LPSRVK  789


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8798  LIWLNW  8781
             L WL W
Sbjct  851   LAWLPW  856


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4170  GRESSRN  4190
             GR+S R+
Sbjct  858   GRQSGRD  864


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  463  RSSSLLAH  440
            R S LLA+
Sbjct  948  RASFLLAQ  955


>sp|Q9P0W0.1|IFNK_HUMAN  RecName: Full=Interferon kappa; Short=IFN-kappa; Flags: Precursor
Length=207

 GENE ID: 56832 IFNK | interferon, kappa [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8272  LYYFY  8258
             LYYFY
Sbjct  194   LYYFY  198


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8089  LTLDCN  8106
             L LDCN
Sbjct  26    LSLDCN  31


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  5203  MSNSF  5189
             MSNSF
Sbjct  51    MSNSF  55


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  812  YYFY  801
            YYFY
Sbjct  195  YYFY  198


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8610  FLKEK  8624
             FLKEK
Sbjct  172   FLKEK  176


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1574  TALFPR  1557
             TALF R
Sbjct  201   TALFRR  206


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1637  REDLAF  1654
             RE+ AF
Sbjct  61    RENIAF  66


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8962  QQFLKY  8945
             Q+FL Y
Sbjct  70    QEFLQY  75


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8609  LFKRK  8623
             LF RK
Sbjct  203   LFRRK  207


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5368  EQEMEPVDPR  5397
             E EM P + R
Sbjct  144   ENEMKPSEAR  153


>ref|NP_055173.1|  C-type lectin domain family 4 member E [Homo sapiens]
 sp|Q9ULY5.1|CLC4E_HUMAN  RecName: Full=C-type lectin domain family 4 member E; AltName: 
Full=C-type lectin superfamily member 9; AltName: Full=Macrophage-inducible 
C-type lectin
Length=219

 GENE ID: 26253 CLEC4E | C-type lectin domain family 4, member E [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 11/24 (45%)
 Frame = -2

Query  3819  YF--SC---S----SWALSIPSKN  3775
             YF  SC   S    SWALS   KN
Sbjct  86    YFQSSCYFFSTDTISWALSL--KN  107


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +3

Query  8121  FWDAGGGKPSNI  8156
             FWD   G P NI
Sbjct  164   FWDV--GEPNNI  173


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2586  MLLWNIAGDP  2557
             M LW +AG P
Sbjct  21    MFLWTVAGIP  30


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +2

Query  9029  WGVASPQILHISSCF  9073
             W VA   IL  S CF
Sbjct  24    WTVAGIPILFLSACF  38


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = -1

Query  4639  ILILSTCHTIIT  4604
             IL LS C   IT
Sbjct  31    ILFLSAC--FIT  40


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4457  RDSRNP  4474
             RDS NP
Sbjct  183   RDSSNP  188


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5485  CFIT  5496
             CFIT
Sbjct  37    CFIT  40


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QEE+E
Sbjct  121   QEEQE  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2855  QSSCLF  2838
             QSSC F
Sbjct  88    QSSCYF  93


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  1624  CLSVQSFIW  1598
             C S Q F W
Sbjct  16    CFSSQMFLW  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4098  HLPANF  4081
             +LP NF
Sbjct  58    QLPENF  63


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8962  QQFLKY  8945
             Q+FL Y
Sbjct  124   QEFLSY  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  1945  NWRFYQS  1965
             NW ++QS
Sbjct  83    NWEYFQS  89


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  940  KRPSMR  957
            K P MR
Sbjct  130  KKPKMR  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6294  FFINL  6308
             FFI L
Sbjct  137   FFIGL  141


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  136  RDPSDP  153
            RD S+P
Sbjct  183  RDSSNP  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  3332  EWEFVNTPPLVK  3367
             +W+ V+  PL K
Sbjct  149   QWQWVDGTPLTK  160


>ref|NP_057520.2|  PHD finger protein 20 [Homo sapiens]
 sp|Q9BVI0.2|PHF20_HUMAN  RecName: Full=PHD finger protein 20; AltName: Full=Hepatocellular 
carcinoma-associated antigen 58; AltName: Full=Glioma-expressed 
antigen 2; AltName: Full=Transcription factor TZP; 
AltName: Full=Novel zinc finger protein
Length=1012

 GENE ID: 51230 PHF20 | PHD finger protein 20 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1525  LPQLKH  1508
             LPQLKH
Sbjct  986   LPQLKH  991


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  8252  RVIEVVQG  8275
             RVIEV +G
Sbjct  751   RVIEVLHG  758


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7568  GKLIC  7582
             GKLIC
Sbjct  198   GKLIC  202


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3255  LNLNCP  3272
             L LNCP
Sbjct  397   LELNCP  402


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  2132  KPGMDGPKVKQ  2164
             KPG   PKVK+
Sbjct  899   KPG--SPKVKE  907


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6795  KVLFHF  6778
             KVL HF
Sbjct  42    KVLIHF  47


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  4456  QGQQKSTLE  4482
             +GQ KS LE
Sbjct  367   EGQLKSALE  375


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  2363  LPRSLEFSY  2337
             LPRS E SY
Sbjct  826   LPRSVEESY  834


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  384  EKIRLR  401
            EKI LR
Sbjct  69   EKIQLR  74


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5707  LRQRKI  5724
             LR RKI
Sbjct  285   LRRRKI  290


 Score = 17.6 bits (34),  Expect(2) = 11167
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5048  NTKKDK  5065
             N KKDK
Sbjct  175   NVKKDK  180


 Score = 15.5 bits (29),  Expect(2) = 11167
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4984  VNIKQD  5001
             VN+K D
Sbjct  174   VNVKKD  179


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  4470  IH---FGKDQ  4490
             IH   F KDQ
Sbjct  131   IHVKAFSKDQ  140


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6220  LHYH  6209
             LHYH
Sbjct  469   LHYH  472


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6565  SRRRGS  6582
             SRRR S
Sbjct  324   SRRRSS  329


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  8456  FQVSRCCSHPIC  8421
             F+V RC    IC
Sbjct  650   FEVVRC----IC  657


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = -1

Query  8452  RSRDAAP---TLSAA  8417
             RS + AP   TL  A
Sbjct  801   RSKEEAPSYRTLNGA  815


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8643  LALPVP  8626
             LALP P
Sbjct  822   LALPLP  827


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1070  TNRMD  1084
             T RMD
Sbjct  954   THRMD  958


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  1083  MTNNPP  1100
             MT  PP
Sbjct  1     MTKHPP  6


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  9156  RLKQWVP  9136
             RLK W P
Sbjct  24    RLKNWYP  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  71  RLKQWVP  51
           RLK W P
Sbjct  24  RLKNWYP  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2813  TVQPIVL  2833
             T QPI L
Sbjct  277   TLQPITL  283


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8592  AVDLSH  8609
             AVDL H
Sbjct  445   AVDLDH  450


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 7/28 (25%)
 Frame = +2

Query  5999  TDP-NP----QEVVLVNVTENFNMWKND  6067
             T+P  P    QE+  V VT  F   K D
Sbjct  411   TEPTSPLVELQEISTVEVTNTFK--KTD  436


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6861  DCLK  6850
             DCLK
Sbjct  458   DCLK  461


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = -3

Query  8456  FQVSRC-CSH  8430
             F V RC  SH
Sbjct  574   FAVTRCGSSH  583


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -3

Query  8957  VLEVLR-MQL  8931
             V EVL  +QL
Sbjct  752   VIEVLHGLQL  761


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  8619  EKGGLEGLIHSQ  8654
             + GG EGL  SQ
Sbjct  925   DRGG-EGLLSSQ  935


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2227  RENFK  2241
             RE FK
Sbjct  163   REKFK  167


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1695  EPTAP  1709
             EPT P
Sbjct  412   EPTSP  416


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6486  VQMSAQ  6503
             V+MS Q
Sbjct  587   VHMSPQ  592


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 5/15 (33%)
 Frame = -2

Query  5829  MVPHLH-P---HLHK  5797
             M P+LH P   H HK
Sbjct  589   MSPQLHGPESGH-HK  602


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 6/13 (46%)
 Frame = -1

Query  4207  IVGNSKFLLDSRP  4169
             IVGN       RP
Sbjct  142   IVGN------ARP  148


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  932  NVKRD  946
            NVK D
Sbjct  175  NVKKD  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2219  EKEGK  2233
             +KEGK
Sbjct  195   DKEGK  199


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = +3

Query  939  KETINEEAAEWDR  977
            KE I E     DR
Sbjct  221  KENISEN----DR  229


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8903  PPSI  8914
             PPSI
Sbjct  263   PPSI  266


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  3948  GLQSTCPCM  3922
             GL+  CP M
Sbjct  396   GLELNCPSM  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 8/22 (36%)
 Frame = +2

Query  2315  LVDFRELN--------KRTQDF  2356
             LV+  E          K T DF
Sbjct  417   LVELQEISTVEVTNTFKKTDDF  438


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8517  EAQEE  8531
             E QEE
Sbjct  658   EVQEE  662


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  6608  NAKTIIV--QL  6634
             NAK I+   QL
Sbjct  735   NAKKIVATHQL  745


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  4160  ACW  4168
             ACW
Sbjct  95    ACW  97


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6406  NSHTL  6420
             NS+TL
Sbjct  274   NSQTL  278


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6395  IPLDRP  6378
             +PL RP
Sbjct  296   VPLKRP  301


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  2071  SQQISSNY  2048
             SQ+ S NY
Sbjct  308   SQEKSKNY  315


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7101  LICPLMG  7081
             L CP MG
Sbjct  399   LNCPSMG  405


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3527  ELQAI  3541
             ELQ I
Sbjct  419   ELQEI  423


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6622  YGFSIVR  6602
             Y F +VR
Sbjct  648   YDFEVVR  654


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +2

Query  17   PDLSLGALW  43
            PDL    LW
Sbjct  772  PDL---PLW  777


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 3/9 (33%)
 Frame = +3

Query  9102  PDLSLGALW  9128
             PDL    LW
Sbjct  772   PDL---PLW  777


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1373  DDSMS  1387
             DDS+S
Sbjct  876   DDSLS  880


>ref|NP_004373.2|  corticotropin-releasing factor receptor 1 isoform 2 [Homo sapiens]
Length=415

 GENE ID: 1394 CRHR1 | corticotropin releasing hormone receptor 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  7120  RAAINKRW--W  7146
             R AI KRW  W
Sbjct  371   RSAIRKRWHRW  381


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1445  YLAHCFS  1425
             YL HC S
Sbjct  124   YLGHCIS  130


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4563  LLGTTFM  4543
             LLG T+M
Sbjct  322   LLGITYM  328


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6944  NSTWF  6958
             N TWF
Sbjct  166   NATWF  170


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7109  SNITGL  7126
             SNI GL
Sbjct  37    SNISGL  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7781  NWFNITNWLW  7810
             N F +TN  W
Sbjct  196   NYFHVTNFFW  205


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VT+FF
Sbjct  200   VTNFF  204


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  4727  RAFIVMSIKPSP---SF  4686
             RA   MSI  SP   SF
Sbjct  393   RA---MSIPTSPTRVSF  406


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 18/28 (64%)
 Frame = +1

Query  1051  LLVPF------------RNK*DG*QIIH  1098
             LLV F            RN      IIH
Sbjct  134   LLVAFVLFLRLRSIRCLRN------IIH  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6288  MHFFIN  6305
             M FF+N
Sbjct  328   MLFFVN  333


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5342  AMSTPNS  5322
             AMS P S
Sbjct  394   AMSIPTS  400


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3447  LVSLLAA  3427
             LV LL A
Sbjct  131   LVALLVA  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2767  FFLMF  2753
             FF MF
Sbjct  203   FFWMF  207


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5478  AMKATL  5461
             A KATL
Sbjct  312   AVKATL  317


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8524  KRRRRW  8541
             KR  RW
Sbjct  376   KRWHRW  381


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 3/17 (17%)
 Frame = -1

Query  1081  HPICS*RVLVVPAMSLP  1031
             H I   R  V  AMS P
Sbjct  385   HSI---RARVARAMSIP  398


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  58   HCLSL  72
            HC SL
Sbjct  127  HCISL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9143  HCLSL  9157
             HC SL
Sbjct  127   HCISL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7097  IRCSSNI  7117
             IRC  NI
Sbjct  147   IRCLRNI  153


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6189  PIVVA  6203
             PI+VA
Sbjct  241   PIIVA  245


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6906  PQLKL  6892
             PQL L
Sbjct  5     PQLRL  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6356  CNTSV  6370
             CN SV
Sbjct  44    CNASV  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3017  EILKE  3031
             EIL E
Sbjct  104   EILNE  108


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1934  FLVSIF  1917
             F VS+F
Sbjct  357   FFVSVF  362


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2827  SAARKR  2844
             SA RKR
Sbjct  372   SAIRKR  377


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3213  CTASVN  3196
             C ASV+
Sbjct  44    CNASVD  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 2/20 (10%)
 Frame = -3

Query  7751  IILVHSFLAGFAI-LQLRSV  7695
             I LV   L  F   L LRS+
Sbjct  129   ISLV-ALLVAFVLFLRLRSI  147


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  386  KNSVKAR  406
            K S+ AR
Sbjct  384  KHSIRAR  390


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3798  ALSIP  3784
             A+SIP
Sbjct  394   AMSIP  398


>sp|P30505.1|1C08_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-8 alpha 
chain; AltName: Full=MHC class I antigen Cw*8; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  136   GYNQF  140


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  8960  AVLEVLRMQLSGHVM  8916
             AVL VL     G VM
Sbjct  319   AVLAVL-----GAVM  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8984  TFRWG  8998
             T RWG
Sbjct  295   TLRWG  299


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


>pdb|1A1X|A  Chain A, Crystal Structure Of Mtcp-1 Involved In T Cell Malignancies
Length=108


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 3/12 (25%)
 Frame = +3

Query  783  RTLNAWVKVVEE  818
            RT   WV VVEE
Sbjct  28   RT---WVAVVEE  36


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 9/9 (100%), Gaps = 0/9 (0%)
 Frame = +3

Query  4746  EVHIPLGDA  4772
             ++++PLGDA
Sbjct  47    QIQVPLGDA  55


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  5414  IQEVSLKLL  5440
             +QE  LKLL
Sbjct  97    VQELLLKLL  105


>sp|P30501.1|1C02_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-2 alpha 
chain; AltName: Full=MHC class I antigen Cw*2; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8874  REVLEWR  8894
             RE  EWR
Sbjct  175   REAEEWR  181


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4202  YNPQSQ  4219
             YN Q Q
Sbjct  91    YNRQAQ  96


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


>gb|AAA51925.1|  complement component C5 [Homo sapiens]
Length=1676

 GENE ID: 727 C5 | complement component 5 [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2177  EEKIKALVE  2203
             EE  KALVE
Sbjct  1436  EEDLKALVE  1444


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1632  FLGKIW  1649
             FLGK W
Sbjct  12    FLGKTW  17


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  2507  ETPGIRYQYNVL  2542
             E PGI Y   VL
Sbjct  341   EIPGIKY---VL  349


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6504  TVLTFV  6487
             TVLTF+
Sbjct  159   TVLTFI  164


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  6851  RLLFYYFQIV  6822
             RLL YY  IV
Sbjct  539   RLLVYY--IV  546


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4553  VPRRK  4567
             VPRRK
Sbjct  780   VPRRK  784


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  7379  LTVQARQL  7402
             LT+Q  QL
Sbjct  85    LTIQPKQL  92


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  6047  NFLSHLP  6027
             N L HLP
Sbjct  998   NILTHLP  1004


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  1251  LLEFYRTG  1228
             LL+ Y TG
Sbjct  1581  LLDIYKTG  1588


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  1990  YEYLIILS  1967
             Y YL ILS
Sbjct  499   YNYL-ILS  505


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2357  WEVQL  2371
             WEV+L
Sbjct  775   WEVHL  779


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4759  GMCTSE  4742
             G CTSE
Sbjct  864   GICTSE  869


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +3

Query  7209  EVNYIN--IK  7232
             ++NY+N  IK
Sbjct  1263  DINYVNPVIK  1272


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             LDL IS
Sbjct  1539  LDLTIS  1544


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1033  PLGSLIW  1013
             PL SL W
Sbjct  1638  PLDSLTW  1644


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1786  YSSLS  1772
             YSSLS
Sbjct  457   YSSLS  461


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  5110  FHLSSVSFVT  5081
             FHL    F T
Sbjct  646   FHLAGLTFLT  655


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 19/40 (47%)
 Frame = +2

Query  7154  NNES--EIFRPGGGDMRDNWRS------EL---YKYKVVK  7240
             N+E   EI RP     R   R       E    YK  VVK
Sbjct  665   NDEPCKEILRP-----R---RTLQKKIEEIAAKYKHSVVK  696


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +2

Query  2690  RT---KIEE  2707
             RT   KIEE
Sbjct  677   RTLQKKIEE  685


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = -3

Query  245  ESCVERAPLVSLSLSGP  195
            E C +RA  +SL   GP
Sbjct  709  ETCEQRAARISL---GP  722


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4317  NTAICTA  4297
             NT IC A
Sbjct  806   NTGICVA  812


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  172   IFHTD  158
             IFH D
Sbjct  1033  IFHSD  1037


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3524  SSDLLC  3507
             SSD LC
Sbjct  1469  SSDFLC  1474


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5316  IFRIG  5330
             IFR+G
Sbjct  30    IFRVG  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  5165  EL----LEELKN  5188
             EL    LE+L N
Sbjct  309   ELSYYSLEDLNN  320


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4808  RRKRLAF  4828
             RRK L F
Sbjct  782   RRKQLQF  788


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  792   DSLTTW  797


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  6405  QFPYII----VP  6428
             +FPY I    VP
Sbjct  958   EFPYRIPLDLVP  969


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2126  KLKPGM  2143
             KLK GM
Sbjct  1048  KLKEGM  1053


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1223  IVSKGF  1206
             IVS GF
Sbjct  1347  IVSTGF  1352


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2244  IFEIF  2230
             IFE F
Sbjct  1479  IFELF  1483


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1958  IKVRQYDQILI  1990
             +K RQY   LI
Sbjct  1612  VKGRQY---LI  1619


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5018  RSYLVM  5001
             R YL+M
Sbjct  1615  RQYLIM  1620


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  3812  HVHL  3801
             HVHL
Sbjct  70    HVHL  73


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +2

Query  2411  VTVLDVGDAYFSV  2449
             VTVL+     F V
Sbjct  428   VTVLE-----FNV  435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4470  IHFG  4481
             IHFG
Sbjct  510   IHFG  513


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1927  FPSSW  1913
             FP SW
Sbjct  769   FPESW  773


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  3209  LPLLIVLH  3186
             LPL I LH
Sbjct  901   LPLEIGLH  908


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  9086  PVQAKSSCLY  9057
             PV+A    LY
Sbjct  1134  PVEARENSLY  1143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8825  VLSFI  8811
             VL FI
Sbjct  160   VLTFI  164


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  7572  FPEQPQIP  7549
             F E+ +IP
Sbjct  336   FSEEAEIP  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3173  AHTNDVKQ  3196
             A+T DV Q
Sbjct  392   AQTIDVNQ  399


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5799  CGDGGG  5816
             CG GGG
Sbjct  634   CGAGGG  639


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  4294  LK--MFSLISY  4268
             LK  M S  SY
Sbjct  1049  LKEGMLSIMSY  1059


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8879  FSLRV  8865
             F LRV
Sbjct  1081  FALRV  1085


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7003  TSFSVI  6986
             T F VI
Sbjct  1145  TAFTVI  1150


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2781  QRNGGSF  2761
             QR GG F
Sbjct  1278  QRYGGGF  1284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +3

Query  7089  VDKL-------DVHQILQ  7121
             VD L       D H ILQ
Sbjct  1446  VDQLFTDYQIKDGHVILQ  1463


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6620  IIVQLN  6637
             +I QLN
Sbjct  1460  VILQLN  1465


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  290  VSTPKI  307
            +S PKI
Sbjct  25   ISAPKI  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7383  VSVIE  7369
             V VIE
Sbjct  327   VTVIE  331


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  8142  KPSNIGGISYSI  8177
             KP    GI Y I
Sbjct  364   KP----GIPYPI  371


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8733  PGVRYP  8750
             PG+ YP
Sbjct  365   PGIPYP  370


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5194  SFILKL  5177
             SF+L L
Sbjct  419   SFVLNL  424


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 11/36 (30%), Positives = 12/36 (33%), Gaps = 18/36 (50%)
 Frame = +2

Query  4565  KAKIIRDYGKQMAGDDCVASRQDED*NMEKFSKTPY  4672
             K KII  +G           R       EKFS   Y
Sbjct  506   KGKIIH-FG----------TR-------EKFSDASY  523


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3812  HVHLGP  3795
             +VHL P
Sbjct  572   QVHLSP  577


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3147  VFRFL  3133
             VF FL
Sbjct  623   VFQFL  627


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  489  ETSEGCRQIL  518
            E  E C +IL
Sbjct  664  ENDEPCKEIL  673


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8331  FCYKM  8345
             FC KM
Sbjct  855   FCVKM  859


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4358  CTPQSP  4341
             CT +SP
Sbjct  866   CTSESP  871


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +1

Query  6688  NPYPERTRESIC  6723
             N Y E    SIC
Sbjct  1090  NKYVEQNQNSIC  1101


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4225  YSLTLG  4208
             Y L LG
Sbjct  1193  YALSLG  1198


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  5862  VALQIINIPRS  5830
             V LQ   IP S
Sbjct  1460  VILQLNSIPSS  1470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7156  VAITTI  7139
             V IT I
Sbjct  1563  VSITSI  1568


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 3/8 (37%)
 Frame = -1

Query  6901  IKTVRYNF  6878
             IK   YNF
Sbjct  1627  IK---YNF  1631


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1614  YNLSF  1600
             YN SF
Sbjct  1629  YNFSF  1633


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8965  CQQFL  8951
             CQ FL
Sbjct  1657  CQAFL  1661


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7071  IAFPTF  7054
             I FP F
Sbjct  183   ISFPDF  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4708  DITMKA  4725
             +IT KA
Sbjct  247   EITIKA  252


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1843  YLYCD  1829
             YLY D
Sbjct  464   YLYID  468


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  715  RSAKITL  735
            R A I L
Sbjct  714  RAARISL  720


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6530  VVSTQL  6547
             VV  QL
Sbjct  733   VVASQL  738


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  786   LQFAL  790


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4386  IMSTILS  4366
             I+S +LS
Sbjct  987   ILSAVLS  993


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7030  YSAWEG  7013
             YS W G
Sbjct  1066  YSVWKG  1071


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2284  KEKRQY  2301
             KE  QY
Sbjct  1119  KENSQY  1124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2549  PVEA  2538
             PVEA
Sbjct  1134  PVEA  1137


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5460  FTIAI  5446
             FT AI
Sbjct  1186  FTLAI  1190


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -3

Query  8681  PQIKDILSSL  8652
             PQ   I S L
Sbjct  1203  PQFRSIVSAL  1212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2555  KGSPAIF  2575
             KG P I+
Sbjct  1219  KGNPPIY  1225


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  1131  IILGLNKI  1154
             +IL LN I
Sbjct  1460  VILQLNSI  1467


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  4040  IPAETGQETA  4069
             I AET  +TA
Sbjct  1543  ISAETRKQTA  1552


>ref|NP_006796.1|  heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
Length=305

 GENE ID: 10949 HNRNPA0 | heterogeneous nuclear ribonucleoprotein A0
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  8861  HPMQAHRV  8838
             HP Q HRV
Sbjct  161   HPIQGHRV  168


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 9/19 (47%)
 Frame = -3

Query  8726  CVVLLIREVALCVVDPQIK  8670
             CVV         VV+PQ K
Sbjct  36    CVV---------VVNPQTK  45


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2927  QLCKL  2941
             QLCKL
Sbjct  5     QLCKL  9


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6693  VSRED  6707
             VSRED
Sbjct  83    VSRED  87


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2314  FSPFSTV  2294
             FS F TV
Sbjct  118   FSQFGTV  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  6365  RCYNLSTYS  6339
             RC+   TYS
Sbjct  48    RCFGFVTYS  56


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8461  MEQSQ  8475
             ME SQ
Sbjct  1     MENSQ  5


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  4337  KGGIGGY  4357
             KGG GGY
Sbjct  211   KGGGGGY  217


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6218  EKGEI  6232
             EK EI
Sbjct  125   EKAEI  129


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6842  FYYFQ  6828
             F YFQ
Sbjct  143   FVYFQ  147


>ref|NP_742100.1|  T-cell surface glycoprotein CD8 beta chain isoform 4 precursor 
[Homo sapiens]
Length=213

 GENE ID: 926 CD8B | CD8b molecule [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RIYWL
Sbjct  51    RIYWL  55


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  168  STLTKRV  148
            STL KRV
Sbjct  148  STLKKRV  154


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -1

Query  8446  RDAAPTLSAAGSARLILSLT  8387
             RDA          R IL LT
Sbjct  94    RDAS---------RFILNLT  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  1017  MREPRGSDIAGT  1052
             M +P G  I GT
Sbjct  175   MKQPQGEGISGT  186


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  337  WVRERQ  354
            W R+RQ
Sbjct  54   WLRQRQ  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5358  RQRRAR  5375
             R RRAR
Sbjct  166   RRRRAR  171


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5207  PRIWL  5221
             PR WL
Sbjct  3     PRLWL  7


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7823  FIMIVG  7840
             F MIVG
Sbjct  115   FCMIVG  120


 Score = 17.2 bits (33),  Expect(2) = 24316
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8656  EDKISL  8673
             E KISL
Sbjct  42    EAKISL  47


 Score = 15.5 bits (29),  Expect(2) = 24316
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8784  VEPDKI  8801
             VE +KI
Sbjct  85    VEQEKI  90


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2147  HPFLAL  2130
             H FLAL
Sbjct  67    HEFLAL  72


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5191  FILKL  5177
             FIL L
Sbjct  99    FILNL  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  5028  SIVEILP  5008
             S+V+ LP
Sbjct  133   SVVDFLP  139


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9035  LPSPAQAT  9012
             LP  AQ T
Sbjct  138   LPTTAQPT  145


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7961  RACRVP  7944
             R CR P
Sbjct  153   RVCRLP  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6363  PQSLH  6377
             PQ LH
Sbjct  189   PQCLH  193


>ref|NP_776214.1|  interleukin-1 receptor antagonist protein isoform 1 precursor 
[Homo sapiens]
Length=177

 GENE ID: 3557 IL1RN | interleukin 1 receptor antagonist [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6424  CPGWF  6438
             CPGWF
Sbjct  141   CPGWF  145


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  6302  KLDIIPID  6325
             K D++PI+
Sbjct  70    KIDVVPIE  77


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4838  SLTQMP  4821
             SLT MP
Sbjct  157   SLTNMP  162


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  8755  VSGYLTPGPGV  8723
             V GYL  GP V
Sbjct  56    VAGYL-QGPNV  65


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/21 (42%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +2

Query  7496  LQA-RILAVER---YLKDQQL  7546
             +QA RI  V     YL + QL
Sbjct  35    MQAFRIWDVNQKTFYLRNNQL  55


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2207  CTEME  2221
             CT ME
Sbjct  147   CTAME  151


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6038  SHLPILLL  6015
             SHL  LLL
Sbjct  9     SHLITLLL  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8778  VPVEP  8792
             VP+EP
Sbjct  74    VPIEP  78


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  501  LLMFL  487
            LL+FL
Sbjct  14   LLLFL  18


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1091  ICHPS  1077
             IC PS
Sbjct  24    ICRPS  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  4430  KIQNFRV  4450
             K Q FR+
Sbjct  34    KMQAFRI  40


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7176  DLEEEI  7193
             +LEE I
Sbjct  66    NLEEKI  71


>ref|NP_001551.1|  interleukin-13 receptor subunit alpha-1 precursor [Homo sapiens]
Length=427

 GENE ID: 3597 IL13RA1 | interleukin 13 receptor, alpha 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 9/11 (81%), Gaps = 1/11 (9%)
 Frame = +3

Query  6177  MILI-PIVVAG  6206
             M LI P++VAG
Sbjct  348   MLLIVPVIVAG  358


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  158  VSVENL  175
            VSVENL
Sbjct  40   VSVENL  45


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  8156  WWNLLQYWSQEL  8191
             W N    WSQE+
Sbjct  327   WSN----WSQEM  334


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 6/24 (25%)
 Frame = +3

Query  1269  EVKNWMTET---LLVQNA---NPD  1322
             EV N  TET     VQ A   NP+
Sbjct  263   EVNNSQTETHNVFYVQEAKCENPE  286


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  4000  SSSCSQW  4020
             SS CS W
Sbjct  59    SSNCSLW  65


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5957  TEVHNV  5974
             TE HNV
Sbjct  269   TETHNV  274


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2558  LSIPVEAHCT  2529
             LS+ VE  CT
Sbjct  38    LSVSVENLCT  47


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6280  ERIC  6291
             ERIC
Sbjct  92    ERIC  95


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7151  SNNESE  7168
             S NESE
Sbjct  103   STNESE  108


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1454  SYHND  1468
             S+HND
Sbjct  237   SFHND  241


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  8090  LLLIVTRIV  8116
             +LLIV  IV
Sbjct  348   MLLIVPVIV  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 4/22 (18%)
 Frame = -2

Query  132  YQSHT---TDGHTLLEAL-KAS  79
            Y+ +T   TD   L E L KAS
Sbjct  405  YEKQTKEETDSVVLIENLKKAS  426


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  2219  EKEGKISKIGPE  2254
             +K+ K  KI PE
Sbjct  72    DKQDK--KIAPE  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +3

Query  4197  FPTIP---KV-KE  4223
             FP IP   K+ KE
Sbjct  375   FPPIPDPGKIFKE  387


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3566  IPNPAK  3549
             IP+P K
Sbjct  378   IPDPGK  383


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  5802  GDGGGDGAP  5828
             G GGG  AP
Sbjct  20    GGGGGGAAP  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6462  RRSME  6476
             RRS E
Sbjct  83    RRSIE  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1982  ILIEIC  1999
             IL+E C
Sbjct  112   ILVEKC  117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  2328  ENLIRE  2345
             EN  RE
Sbjct  174   ENIFRE  179


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2285  KKKDST  2302
             KK +ST
Sbjct  338   KKRNST  343


>ref|NP_002115.2|  major histocompatibility complex, class II, DR beta 1 precursor 
[Homo sapiens]
Length=266

 GENE ID: 3123 HLA-DRB1 | major histocompatibility complex, class II, DR beta 1
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +2

Query  1931  KMIGGIGGFI  1960
             KM  G+GGF+
Sbjct  227   KMLSGVGGFV  236


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 10/20 (50%)
 Frame = -2

Query  6633  SC------TIMV----LALS  6604
             SC      T MV    LALS
Sbjct  10    SCMTALTVTLMVLSSPLALS  29


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  3080  IQKQGQGQWTYQ  3115
             IQ    G WT+Q
Sbjct  177   IQN---GDWTFQ  185


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2049  MLTGVG  2032
             ML GVG
Sbjct  228   MLSGVG  233


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5306  LFIHFQN  5326
             LFI F N
Sbjct  246   LFIYFRN  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  2035  YTCQ  2046
             YTCQ
Sbjct  200   YTCQ  203


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2768  PPFLW  2782
             P FLW
Sbjct  34    PRFLW  38


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1482  FRNQ  1493
             FRNQ
Sbjct  250   FRNQ  253


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 11/24 (45%)
 Frame = -3

Query  1373  HFF*CSRWSQCF*NSLTIWVRILD  1302
             HFF          N  T  VR LD
Sbjct  45    HFF----------NG-TERVRFLD  57


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  3047  TLHVLVLLE  3021
             T + LV+LE
Sbjct  183   TFQTLVMLE  191


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 4/18 (22%)
 Frame = +3

Query  861  SEGATPQDLNTMLNTVGG  914
            SE A  Q    ML  VGG
Sbjct  221  SESA--Q--SKMLSGVGG  234


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3808  FILGLIY  3788
             F+LGL +
Sbjct  235   FVLGLLF  241


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4930  FQTL  4941
             FQTL
Sbjct  184   FQTL  187


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9113  AQIWSNQRD  9087
             A+ W  Q D
Sbjct  87    AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -1

Query  28  AQIWSNQRD  2
           A+ W  Q D
Sbjct  87  AEYWNSQKD  95


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  492  FLTGQD  475
            FL GQ+
Sbjct  161  FLNGQE  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  894  MLNTV  908
            ML TV
Sbjct  189  MLETV  193


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8766  TIQRSV  8749
             T+QR V
Sbjct  119   TVQRRV  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1020  SSGLVQ  1003
             S GL+Q
Sbjct  173   STGLIQ  178


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  8600  IYSCLVSH  8577
             +Y C V H
Sbjct  199   VYTCQVEH  206


>emb|CAC03920.1|  T-cell receptor beta chain [Homo sapiens]
Length=84


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  23    IYYSQIV--NDFQK  34


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  20    LR-----LIYYSQIV  29


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  45    REKKE  49


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  29    VNDFQK  34


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  42    SVSRE  46


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  6526  ASSINS-TA  6549
             ASSI S TA
Sbjct  69    ASSIESRTA  77


>ref|NP_001138618.1|  corticotropin-releasing factor receptor 1 isoform 1 [Homo sapiens]
Length=444

 GENE ID: 1394 CRHR1 | corticotropin releasing hormone receptor 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  7120  RAAINKRW--W  7146
             R AI KRW  W
Sbjct  400   RSAIRKRWHRW  410


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1445  YLAHCFS  1425
             YL HC S
Sbjct  124   YLGHCIS  130


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4563  LLGTTFM  4543
             LLG T+M
Sbjct  351   LLGITYM  357


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  393  RLRPG  407
            RLRPG
Sbjct  143  RLRPG  147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6944  NSTWF  6958
             N TWF
Sbjct  195   NATWF  199


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7109  SNITGL  7126
             SNI GL
Sbjct  37    SNISGL  42


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  7781  NWFNITNWLW  7810
             N F +TN  W
Sbjct  225   NYFHVTNFFW  234


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VT+FF
Sbjct  229   VTNFF  233


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  4727  RAFIVMSIKPSP---SF  4686
             RA   MSI  SP   SF
Sbjct  422   RA---MSIPTSPTRVSF  435


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6288  MHFFIN  6305
             M FF+N
Sbjct  357   MLFFVN  362


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5342  AMSTPNS  5322
             AMS P S
Sbjct  423   AMSIPTS  429


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3447  LVSLLAA  3427
             LV LL A
Sbjct  131   LVALLVA  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2767  FFLMF  2753
             FF MF
Sbjct  232   FFWMF  236


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5478  AMKATL  5461
             A KATL
Sbjct  341   AVKATL  346


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8524  KRRRRW  8541
             KR  RW
Sbjct  405   KRWHRW  410


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 3/17 (17%)
 Frame = -1

Query  1081  HPICS*RVLVVPAMSLP  1031
             H I   R  V  AMS P
Sbjct  414   HSI---RARVARAMSIP  427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  58   HCLSL  72
            HC SL
Sbjct  127  HCISL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9143  HCLSL  9157
             HC SL
Sbjct  127   HCISL  131


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7097  IRCSSNI  7117
             IRC  NI
Sbjct  176   IRCLRNI  182


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6189  PIVVA  6203
             PI+VA
Sbjct  270   PIIVA  274


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6906  PQLKL  6892
             PQL L
Sbjct  5     PQLRL  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6356  CNTSV  6370
             CN SV
Sbjct  44    CNASV  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3017  EILKE  3031
             EIL E
Sbjct  104   EILNE  108


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1934  FLVSIF  1917
             F VS+F
Sbjct  386   FFVSVF  391


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2827  SAARKR  2844
             SA RKR
Sbjct  401   SAIRKR  406


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3213  CTASVN  3196
             C ASV+
Sbjct  44    CNASVD  49


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  386  KNSVKAR  406
            K S+ AR
Sbjct  413  KHSIRAR  419


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3798  ALSIP  3784
             A+SIP
Sbjct  423   AMSIP  427


>sp|P30504.1|1C04_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-4 alpha 
chain; AltName: Full=MHC class I antigen Cw*4; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  136   GYNQF  140


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    WK P SQP
Sbjct  292   EPLTLRWK-PSSQP  304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  319   AVLAVL  324


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7854  KPTKPPTI  7831
             KP   PTI
Sbjct  299   KPSSQPTI  306


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  7536  SFRYLST  7516
             S RY ST
Sbjct  28    SMRYFST  34


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  6541  STAVKW  6558
             ST V W
Sbjct  33    STSVSW  38


>sp|Q29963.2|1C06_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-6 alpha 
chain; AltName: Full=MHC class I antigen Cw*6; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  8960  AVLEVLRMQLSGHVM  8916
             AVL VL     G VM
Sbjct  319   AVLAVL-----GAVM  328


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4642  LILILS  4625
             LIL LS
Sbjct  9     LILLLS  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8960  AVLEVL  8943
             AVL VL
Sbjct  316   AVLAVL  321


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRTLILLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FISVGY  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             TL  LLS
Sbjct  8     TLILLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  43    EPRFISVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  46    FISVGYVD  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLRWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2132  LILL  2121
             LILL
Sbjct  9     LILL  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  7302  EQW  7310
             EQW
Sbjct  178   EQW  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  179  QWR  187
            QWR
Sbjct  179  QWR  181


>ref|NP_000368.1|  wiskott-Aldrich syndrome protein [Homo sapiens]
Length=502

 GENE ID: 7454 WAS | Wiskott-Aldrich syndrome (eczema-thrombocytopenia)
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8388  VRERMRRAEP  8417
             VR+ MRR EP
Sbjct  303   VRQEMRRQEP  312


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2615  QNPDI  2629
             QNPDI
Sbjct  203   QNPDI  207


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/14 (50%), Positives = 10/14 (71%), Gaps = 1/14 (7%)
 Frame = -1

Query  9055  QDLRARHSPVPPRP  9014
             Q++R R+ P PP P
Sbjct  305   QEMR-RQEPLPPPP  317


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827  GAPSPPPSP  5801
             G P PPP P
Sbjct  365   GGPPPPPPP  373


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -2

Query  7614  LQLAFQGTAVVQM  7576
             L LA   TAVVQ+
Sbjct  44    LTLA---TAVVQL  53


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7663  PLHPG  7649
             PLHPG
Sbjct  178   PLHPG  182


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3297  HVSHV  3283
             HVSHV
Sbjct  246   HVSHV  250


 Score = 17.6 bits (34),  Expect(2) =  6617
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 0/16 (0%)
 Frame = -3

Query  9053  GSEGSPLPSPAQATPP  9006
             G  G P+P P    PP
Sbjct  387   GAGGPPMPPPPPPPPP  402


 Score = 17.2 bits (33),  Expect(2) =  6617
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 0/18 (0%)
 Frame = -1

Query  9031  PVPPRPRLPGKSPAESPL  8978
             P PP P   G  PA  PL
Sbjct  398   PPPPPPPSSGNGPAPPPL  415


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1800  LRSLF  1814
             LRSLF
Sbjct  267   LRSLF  271


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7247  PLGVAP  7264
             PLG+AP
Sbjct  346   PLGIAP  351


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5827  GAPSPPPSP  5801
             G P PPP P
Sbjct  390   GPPMPPPPP  398


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1172  RAIHS  1158
             RAIHS
Sbjct  479   RAIHS  483


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  201  RSLFGR  184
            RSLF R
Sbjct  268  RSLFSR  273


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             P PPPS
Sbjct  315   PPPPPS  320


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  5824  APSPPPSP  5801
             AP PPP P
Sbjct  350   AP-PPPTP  356


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  394   PPPPPPP  400


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  395   PPPPPPP  401


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  396   PPPPPPP  402


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  397   PPPPPPP  403


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  398   PPPPPPP  404


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             P PPPS
Sbjct  400   PPPPPS  405


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5513  PMAGRSG  5533
             PM GR G
Sbjct  5     PMGGRPG  11


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5602  HVMQ  5613
             HVMQ
Sbjct  472   HVMQ  475


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3377  QLEKEPIVG  3403
             QL   PIVG
Sbjct  325   QLPRPPIVG  333


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  7535  PLGIFPQP  7512
             PLGI P P
Sbjct  346   PLGIAPPP  353


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  4502  RGALL  4488
             RGALL
Sbjct  431   RGALL  435


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3726  PPIPL  3712
             PP+PL
Sbjct  343   PPVPL  347


 Score = 15.9 bits (30),  Expect(2) = 25421
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  314   PPPPP  318


 Score = 15.9 bits (30),  Expect(2) = 25421
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  315   PPPPP  319


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  140  IPQTLL  157
            IP TLL
Sbjct  22   IPSTLL  27


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5815  PPPSP  5801
             PPP P
Sbjct  161   PPPTP  165


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7198  PHISSSR  7178
             P I SSR
Sbjct  205   PDITSSR  211


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P P PSP
Sbjct  216   PAPGPSP  222


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  555  ELRSLY  572
            +LRSL+
Sbjct  266  DLRSLF  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1405  AIRQE  1419
             A+RQE
Sbjct  302   AVRQE  306


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 4/11 (36%)
 Frame = -3

Query  9038  PLPSPAQATPP  9006
             PLP P    PP
Sbjct  380   PLPPP----PP  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  7801  ICYVKPIPQ  7775
             +C+VK  PQ
Sbjct  72    VCFVKDNPQ  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4723  ALIQE  4737
             AL+QE
Sbjct  139   ALVQE  143


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8630  TGRANSLP  8653
             TGR   LP
Sbjct  375   TGRSGPLP  382


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 1/17 (5%)
 Frame = +2

Query  8930  RAASGVLQELLTSSLLQ  8980
             R A  V Q+   S LLQ
Sbjct  13    RGAPAV-QQNIPSTLLQ  28


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8117  ELLGR  8131
             E+LGR
Sbjct  37    EMLGR  41


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 5/16 (31%)
 Frame = -2

Query  6147  QSGVNF-----THGFR  6115
             Q G NF      + FR
Sbjct  123   QAGLNFADEDEAQAFR  138


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3726  PPIPL  3712
             PP PL
Sbjct  175   PPLPL  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1095  PPIPVG  1112
             PP+P G
Sbjct  343   PPVPLG  348


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5821  PSPPP  5807
             P PPP
Sbjct  382   PPPPP  386


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8309  IRQG  8320
             IRQG
Sbjct  438   IRQG  441


>sp|Q29865.1|1C18_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-18 alpha 
chain; AltName: Full=MHC class I antigen Cw*18; Flags: 
Precursor
Length=366


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6088  GYNQF  6102
             GYNQF
Sbjct  136   GYNQF  140


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    WK P SQP
Sbjct  292   EPLTLRWK-PSSQP  304


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7070  LLFLLS  7053
             LL LLS
Sbjct  9     LLLLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FISVGY  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7854  KPTKPPTI  7831
             KP   PTI
Sbjct  299   KPSSQPTI  306


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRALLLLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  43    EPRFISVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  46    FISVGYVD  53


>ref|NP_066294.1|  protein SSX3 isoform a [Homo sapiens]
Length=188

 GENE ID: 10214 SSX3 | synovial sarcoma, X breakpoint 3 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  3910  KRRSHAWTSRL  3942
             KR  HAWT RL
Sbjct  158   KRGEHAWTHRL  168


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6739  RKYETST  6759
             RKYE  T
Sbjct  53    RKYEAMT  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2225  EGKISKIGPE  2254
             EG +SK  PE
Sbjct  119   EGNVSKEVPE  128


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2336  NKRTQDF  2356
             NKR  DF
Sbjct  73    NKRVTDF  79


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 2/14 (14%)
 Frame = +1

Query  5104  DGTSPRRPRATEGA  5145
             D T  RRP  T GA
Sbjct  4     DDTFARRP--TVGA  15


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1812  FGNDP  1826
             F NDP
Sbjct  84    FDNDP  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5117  PEDQGPQ  5137
             PE  GPQ
Sbjct  127   PEASGPQ  133


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  9093  ERPSTGKKQLLI  9058
             ER     KQL I
Sbjct  170   ER-----KQLVI  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 1/7 (14%)
 Frame = +2

Query  2627  IVIYQYM  2647
             IV Y YM
Sbjct  46    IV-YVYM  51


>ref|NP_065865.1|  E3 ubiquitin-protein ligase MARCH4 precursor [Homo sapiens]
 sp|Q9P2E8.2|MARH4_HUMAN  RecName: Full=E3 ubiquitin-protein ligase MARCH4; AltName: Full=Membrane-associated 
RING finger protein 4; AltName: Full=Membrane-associated 
RING-CH protein IV; Short=MARCH-IV; AltName: 
Full=RING finger protein 174; Flags: Precursor
Length=410

 GENE ID: 57574 MARCH4 | membrane-associated ring finger (C3HC4) 4
[Homo sapiens] (10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  9031  PVPPRPRLP  9005
             PVPP P LP
Sbjct  103   PVPPPPPLP  111


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  184  APEQGP  201
            APEQGP
Sbjct  356  APEQGP  361


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = +2

Query  3050  YDPSKDLIAEIQKQG  3094
             YD  KDL  E QK G
Sbjct  317   YDKTKDL--EDQKAG  329


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6424  CPGWFC  6441
             C GW+C
Sbjct  16    CSGWYC  21


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  2505  MRHQGL  2522
             +RHQGL
Sbjct  32    LRHQGL  37


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5962  LCIICF  5945
             LC ICF
Sbjct  162   LCRICF  167


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +3

Query  8556  PQVPLRPM  8579
             PQ PL PM
Sbjct  58    PQAPL-PM  64


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1116  IYKRW  1130
             I+KRW
Sbjct  301   IFKRW  305


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5937  QMLKH  5951
             QML H
Sbjct  30    QMLRH  34


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  505  QPSDVSNRPGLTAN  464
            QP      PGL AN
Sbjct  69   QP------PGLAAN  76


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1569  GCWKC  1583
             GCW C
Sbjct  201   GCWSC  205


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  3702  YQHTKELEE  3728
             Y  TK+LE+
Sbjct  317   YDKTKDLED  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/17 (47%), Positives = 8/17 (47%), Gaps = 4/17 (23%)
 Frame = +3

Query  7287  CREKKEQWE*ELCSLGS  7337
             C EK E       SLGS
Sbjct  140   CKEKTEDR----YSLGS  152


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  225  SSLDAGL  245
            SSLD G+
Sbjct  152  SSLDSGM  158


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -3

Query  4805  MQTPIC--CY  4782
             M TP C  C+
Sbjct  158   MRTPLCRICF  167


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4477  KWIS  4466
             KWIS
Sbjct  195   KWIS  198


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4357  VPPNPP  4340
             VPP PP
Sbjct  104   VPPPPP  109


 Score = 15.9 bits (30),  Expect(2) = 33079
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  4925  LFFRLCY  4945
             L F  CY
Sbjct  271   LLFQICY  277


 Score = 15.5 bits (29),  Expect(2) = 33079
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4915  ITLTV  4929
             I LTV
Sbjct  228   ISLTV  232


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2062  SVDSDW  2079
             SV+ DW
Sbjct  114   SVEDDW  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8015  LIEWI  8001
             LI WI
Sbjct  193   LIKWI  197


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 1/9 (11%)
 Frame = +2

Query  914  TSSS-HANV  937
            TSSS +AN+
Sbjct  336  TSSSTQANI  344


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 6/18 (33%)
 Frame = -3

Query  9050  SE----GSPLP--SPAQA  9015
             SE    G P P   PAQA
Sbjct  347   SEEETAGTPAPEQGPAQA  364


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  244  SP--ASREL  224
            SP   SREL
Sbjct  395  SPPGSSREL  403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4352  PQSPL  4338
             PQ PL
Sbjct  58    PQAPL  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  6143  VGLILH  6126
             +GLI H
Sbjct  288   IGLIIH  293


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5820  HLHPH  5806
             HL PH
Sbjct  387   HLRPH  391


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8826  CSLLYW  8809
             C LL W
Sbjct  6     CGLLWW  11


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  6868  RGPR  6879
             RGPR
Sbjct  91    RGPR  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8037  ISAKDP  8020
             IS K+P
Sbjct  217   ISTKNP  222


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8658  RQDIL  8672
             RQD L
Sbjct  268   RQDLL  272


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2489  IPSINNETPG  2518
             IPS   ET G
Sbjct  344   IPSSEEETAG  353


>emb|CAB59406.1|  T cell receptor beta chain variable region [Homo sapiens]
Length=85


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  24    IYYSQIV--NDFQK  35


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  21    LR-----LIYYSQIV  30


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  46    REKKE  50


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  30    VNDFQK  35


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  43    SVSRE  47


>ref|NP_005626.1|  protein SSX1 [Homo sapiens]
Length=188

 GENE ID: 6756 SSX1 | synovial sarcoma, X breakpoint 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +1

Query  3910  KRRSHAWTSRL  3942
             KR  HAWT RL
Sbjct  158   KRGKHAWTHRL  168


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4848  EWRKKRYS  4871
             EW K  YS
Sbjct  36    EWKKMKYS  43


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7643  DSKSVPE  7623
             DSK V E
Sbjct  122   DSKGVSE  128


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  8011  ISERI  8025
             ISE I
Sbjct  147   ISEKI  151


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -2

Query  9093  ERPSTGKKQLLI  9058
             ER     KQL I
Sbjct  170   ER-----KQLVI  176


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 4/16 (25%)
 Frame = +1

Query  5104  DGTSPRRPR----ATE  5139
             D T   RPR    A E
Sbjct  4     DDTFAKRPRDDAKASE  19


>sp|P30484.1|1B46_HUMAN  RecName: Full=HLA class I histocompatibility antigen, B-46 alpha 
chain; AltName: Full=MHC class I antigen B*46; AltName: 
Full=Bw-46; Flags: Precursor
Length=362

 GENE ID: 3106 HLA-B | major histocompatibility complex, class I, B
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WIEQEGPEYWDRETQKY  91


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6545  LLLNGSLA  6568
             LLL G LA
Sbjct  11    LLLSGALA  18


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  333   RRKSSG  338


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1904  MSLPGR  1921
             MS PGR
Sbjct  36    MSRPGR  41


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q YT H
Sbjct  279   QRYTCH  284


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FIAVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2081  NQSE  2070
             NQSE
Sbjct  110   NQSE  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3421  YIEGFC  3404
             Y EG C
Sbjct  183   YLEGLC  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8734  QGSDI  8748
             QGSD+
Sbjct  354   QGSDV  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  7073  TLLFLLS  7053
             T L LLS
Sbjct  8     TVLLLLS  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  809  YFY  801
            YFY
Sbjct  31   YFY  33


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  7302  EQW  7310
             EQW
Sbjct  178   EQW  180


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  179  QWR  187
            QWR
Sbjct  179  QWR  181


>gb|AAG27297.1|AF265242_1  type-I T cell cytokine receptor [Homo sapiens]
Length=636

 GENE ID: 9466 IL27RA | interleukin 27 receptor, alpha [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5105  MEQAPEDQ  5128
             MEQ PE Q
Sbjct  571   MEQVPEAQ  578


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  963  AEWDRVHPVHA  995
            AEW RV  V A
Sbjct  293  AEWARVSAVNA  303


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -3

Query  1514  ETLNNLSLV  1488
             E L NLSLV
Sbjct  307   EPLTNLSLV  315


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6361  HLSHYT  6378
             HL HYT
Sbjct  448   HLTHYT  453


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9026  PAQATPP  9006
             PAQAT P
Sbjct  602   PAQATAP  608


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1634  FREDLA  1651
             FRE+LA
Sbjct  410   FREELA  415


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4848  LWRLPD  4831
             LWRL D
Sbjct  422   LWRLQD  427


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 12/31 (38%)
 Frame = -2

Query  4095  LPANFKRKYAVSCP-------VSA-GITSAS  4027
             LP NF     V  P       VSA G  SAS
Sbjct  379   LPGNF----TVGVPYRITVTAVSASGLASAS  405


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5812  PPSPQV  5795
             PP PQV
Sbjct  629   PPRPQV  634


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = +1

Query  5368  EQEMEPVDPRLEP  5406
             E +M P  PRL P
Sbjct  123   ETQMKPNAPRLGP  135


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8962  DIELAT  8979
             D ELAT
Sbjct  195   DLELAT  200


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3753  LTNLS  3739
             LTNLS
Sbjct  309   LTNLS  313


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6365  RCYNL  6351
             RCY L
Sbjct  541   RCYHL  545


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  8459  TWSNHK  8476
             TW  HK
Sbjct  155   TWPSHK  160


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5870  LWVT  5881
             LWVT
Sbjct  487   LWVT  490


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  334  RWVRE  348
            RWV E
Sbjct  552  RWVWE  556


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +2

Query  6614  KTIIVQLNTSVEI  6652
             KTI   L T VEI
Sbjct  184   KTI--PL-TPVEI  193


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4475  LWKGP  4489
             LWK P
Sbjct  254   LWKAP  258


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  8951  EVLRMQLSGH  8922
             EV R QL GH
Sbjct  439   EVPRHQLRGH  448


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +1

Query  8152  IL----VESPTVLES  8184
             IL     E P V+ES
Sbjct  585   ILEVEEMEPPPVMES  599


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3717  ELEEM  3731
             E EEM
Sbjct  587   EVEEM  591


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4201  LQSPKSRS  4224
             LQS K RS
Sbjct  68    LQSQKYRS  75


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  956  GSCRM  970
            G CRM
Sbjct  206  GRCRM  210


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  224  PLVSLSL  204
            PL  LSL
Sbjct  308  PLTNLSL  314


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = -3

Query  5942  HLMHKIEWWLLP  5907
             HL HK+    LP
Sbjct  544   HLRHKV----LP  551


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6191  NSSSG  6205
             NSSSG
Sbjct  563   NSSSG  567


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  6273  LPLMLVL  6253
             LPL+ VL
Sbjct  20    LPLLWVL  26


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1284  MTETLLV  1304
             M + LLV
Sbjct  99    MSDKLLV  105


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  7341  EQQEALW  7361
             E +E LW
Sbjct  211   EKEEDLW  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5223  WSQIL  5209
             WS IL
Sbjct  220   WSPIL  224


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7002  LPSVLF  6985
             LP +LF
Sbjct  518   LPGILF  523


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  218  PEEL  229
            PEEL
Sbjct  621  PEEL  624


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  447  LPILYVL  427
            LP L VL
Sbjct  20   LPLLWVL  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3812  EKYHSN  3829
             +KY SN
Sbjct  71    QKYRSN  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  8901  CQTSTLTLLSP  8869
             CQ    TLL P
Sbjct  171   CQEAAWTLLEP  181


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5834  GAWCPI  5817
             G W PI
Sbjct  218   GEWSPI  223


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8966  SSLLQGTF  8989
             S LL G F
Sbjct  376   SALLPGNF  383


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4527  YKIIVT  4544
             Y I VT
Sbjct  389   YRITVT  394


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7558  PNPQEL  7541
             P P+EL
Sbjct  619   PTPEEL  624


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7174  EDLGL  7160
             E+LGL
Sbjct  622   EELGL  626


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  301  WRTHQSPP  278
            WR +  PP
Sbjct  423  WRLQDAPP  430


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = -2

Query  2517  PGV----SLFILG  2491
             PG+     LF LG
Sbjct  519   PGILFLWGLFLLG  531


>emb|CAB59372.1|  T cell receptor beta chain variable region [Homo sapiens]
Length=90


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 2/14 (14%)
 Frame = -2

Query  7815  IYHSQFVMLNQFHK  7774
             IY SQ V  N F+K
Sbjct  29    IYYSQIV--NDFQK  40


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -3

Query  6866  LRIA*RLLFYYFQIV  6822
             LR     L YY QIV
Sbjct  26    LR-----LIYYSQIV  35


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7290  REKKE  7304
             REKKE
Sbjct  51    REKKE  55


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2855  VNDIQK  2872
             VND QK
Sbjct  35    VNDFQK  40


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6690  SVSRE  6704
             SVSRE
Sbjct  48    SVSRE  52


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  1357  AAGPN  1343
             AAGPN
Sbjct  78    AAGPN  82


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8938  CSSRA  8924
             C SRA
Sbjct  74    CASRA  78


>gb|AAK26744.1|AF296673_1  toll-like receptor 10 [Homo sapiens]
Length=811

 GENE ID: 81793 TLR10 | toll-like receptor 10 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 3/13 (23%)
 Frame = -1

Query  1852  LPPYLYCDEGSLP  1814
             LP Y   +EGSLP
Sbjct  177   LPHY---EEGSLP  186


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  6401  EPIPIHYCAP  6430
             EPIP  YC P
Sbjct  731   EPIPF-YCIP  739


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8033  LIWDDL  8050
             L WDDL
Sbjct  254   LLWDDL  259


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/23 (47%), Positives = 11/23 (47%), Gaps = 10/23 (43%)
 Frame = +3

Query  1257  QASQEVKNWMTETLLVQNA--NP  1319
             Q  QEVK     TL   NA  NP
Sbjct  509   QSCQEVK-----TL---NAGRNP  523


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = -2

Query  1917  PGKLISSNTVS  1885
             PGK IS N VS
Sbjct  674   PGKSISENIVS  684


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = -1

Query  6040  CHIYQYYF  6017
             CH Y++YF
Sbjct  706   CH-YEFYF  712


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  5273  LLPKYPHKFH  5244
             L P YP KF+
Sbjct  342   LFPNYPTKFQ  351


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/34 (32%), Positives = 12/34 (35%), Gaps = 20/34 (58%)
 Frame = -3

Query  2456  LRELKNMHHPHPVLLLI-FSFLTLRDVVFLIELP  2358
             LREL            I F FLT        +LP
Sbjct  468   LRELN-----------IAFNFLT--------DLP  482


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  7782  FHKLAHL  7762
             F+K AHL
Sbjct  159   FQKIAHL  165


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3103  MDISNL  3120
             MDI NL
Sbjct  326   MDIENL  331


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4383  MSTILSPAL  4357
             M  ILSP L
Sbjct  497   MNFILSPSL  505


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +2

Query  3047  YYDPSKDLIAE-----IQK  3088
             Y+DP K  I E     I+K
Sbjct  671   YFDPGKS-ISENIVSFIEK  688


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  9074  LPVLGLSG  9097
             L +LGLSG
Sbjct  144   LEILGLSG  151


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4442  FRVYY  4456
             FRV+Y
Sbjct  309   FRVFY  313


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -3

Query  4493  LLVLS-KVDFCC  4461
             +LVL   V FCC
Sbjct  587   MLVLGLAVAFCC  598


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4267  LSYNFL  4250
             LSYN L
Sbjct  55    LSYNLL  60


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  7684  HKLNTLL  7704
             HKL  LL
Sbjct  743   HKLKALL  749


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  4563  EKQRSLGIMEN  4595
             E QR L  +EN
Sbjct  232   EMQRNLS-LEN  241


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 18/33 (54%)
 Frame = +2

Query  6605  DNAKTIIVQLN------------------TSVE  6649
             +NAKT +  LN                  TSVE
Sbjct  240   ENAKTSVLLLNKVDLLWDDLFLILQFVWHTSVE  272


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  4490  LVLSKVD  4470
             L L KVD
Sbjct  247   LLLNKVD  253


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/17 (41%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  3053  HNTLH------VLVLLE  3021
             HN  H      +L+LLE
Sbjct  715   HNLFHENSDHIILILLE  731


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2539  HIVLI  2525
             HI+LI
Sbjct  724   HIILI  728


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1368  EMMTAC  1385
             E+MT C
Sbjct  29    ELMTNC  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6840  LLFPN  6826
             +LFPN
Sbjct  341   MLFPN  345


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2886  NFPTNF  2869
             N+PT F
Sbjct  345   NYPTKF  350


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3683  KVYLAW  3700
             K YL W
Sbjct  752   KAYLEW  757


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/20 (35%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -2

Query  984  DALYPILQLPH*WSLLTFAW  925
            D L+ ILQ         F W
Sbjct  257  DDLFLILQ---------FVW  267


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  7668  EKLTITQA  7691
             E LTI  A
Sbjct  329   ENLTISNA  336


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1777  LSIGSCF  1757
             LS  SCF
Sbjct  387   LSLVSCF  393


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2183  KIKALVE  2203
             K KAL E
Sbjct  744   KLKALLE  750


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8033  LIWDDLR  8053
             L W +LR
Sbjct  766   LFWANLR  772


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6078  CSTMS  6064
             CS MS
Sbjct  34    CSNMS  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3818  ISHVHL  3801
             I H HL
Sbjct  162   IAHLHL  167


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5543  EELIRTVR  5566
             E+L R VR
Sbjct  626   EQLKRNVR  633


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = +2

Query  5465  VAFIAK-----FV  5488
             V FI K     FV
Sbjct  683   VSFIEKSYKSIFV  695


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  2034  LHLST  2048
             LHL T
Sbjct  165   LHLNT  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6584  IRSVNF  6601
             IR V F
Sbjct  276   IRNVTF  281


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2890  IQFPH  2876
             IQ PH
Sbjct  369   IQLPH  373


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  8068  QLPPLERLTLD  8100
             QLP L  L L+
Sbjct  370   QLPHLKTLILN  380


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2606  KALRFL  2589
             K LR+L
Sbjct  96    KELRYL  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1898  EEMSLP  1915
             EE SLP
Sbjct  181   EEGSLP  186


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2310  LHLVL  2296
             LH VL
Sbjct  193   LHIVL  197


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7900  LPNSIH  7883
             LP SI+
Sbjct  441   LPKSIQ  446


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4753  CTSEL  4739
             CT EL
Sbjct  526   CTCEL  530


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             HL EL
Sbjct  568   HLHEL  572


>ref|NP_002108.4|  HLA class I histocompatibility antigen, Cw-1 alpha chain precursor 
[Homo sapiens]
 sp|P10321.3|1C07_HUMAN  RecName: Full=HLA class I histocompatibility antigen, Cw-7 alpha 
chain; AltName: Full=MHC class I antigen Cw*7; Flags: Precursor
Length=366

 GENE ID: 3107 HLA-C | major histocompatibility complex, class I, C
[Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 7/17 (41%), Positives = 7/17 (41%), Gaps = 6/17 (35%)
 Frame = +2

Query  7652  WME------WDREINNY  7684
             W E      WDRE   Y
Sbjct  75    WVEQEGPEYWDRETQKY  91


 Score = 21.8 bits (44),  Expect =   981
 Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 11/27 (40%)
 Frame = +1

Query  4732  QE*VQKYTSH*GMLDW**QHIGVCIQE  4812
             QE  Q YT H  M     QH G   QE
Sbjct  277   QE--QRYTCH--M-----QHEG--LQE  292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  8724  CSSANQGS--SLV  8692
             CS   QGS  SL+
Sbjct  350   CSNSAQGSDESLI  362


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  847  MGITSGL  827
            MGI  GL
Sbjct  309  MGIVAGL  315


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  2453  LDEDFRKYTA  2482
             L+ED R  TA
Sbjct  150   LNEDLRSWTA  159


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6983  SNNTEGSD  7006
             SN  +GSD
Sbjct  351   SNSAQGSD  358


 Score = 17.2 bits (33),  Expect(2) = 23938
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7294  RKKSSG  7311
             R KSSG
Sbjct  334   RRKSSG  339


 Score = 15.1 bits (28),  Expect(2) = 23938
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +3

Query  7143  VVIATMSPRSS  7175
             VV A M  R S
Sbjct  327   VVTAMMCRRKS  337


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2505  MRHQGL  2522
             M H+GL
Sbjct  285   MQHEGL  290


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  152  GSEGSLVT  129
            GS+ SL+T
Sbjct  356  GSDESLIT  363


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7070  LLFLLS  7053
             LL LLS
Sbjct  9     LLLLLS  14


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3901  FITAGY  3884
             FI  GY
Sbjct  46    FISVGY  51


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8394  ERMRRAEP  8417
             E + RAEP
Sbjct  201   ETLQRAEP  208


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  3098  LAPASVFLLLS  3066
             +AP    LLLS
Sbjct  4     MAPRALLLLLS  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  2765  EPPFLWMGY  2791
             EP F   GY
Sbjct  43    EPRFISVGY  51


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4027  YISTGYMN  4004
             +IS GY +
Sbjct  46    FISVGYVD  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +1

Query  5401  EP----WKHPGSQP  5430
             EP    W  P SQP
Sbjct  292   EPLTLSWE-PSSQP  304


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5419  LDASRA  5402
             L+A RA
Sbjct  171   LEAARA  176


>ref|NP_149023.2|  tripartite motif-containing protein 5 isoform alpha [Homo sapiens]
Length=493

 GENE ID: 85363 TRIM5 | tripartite motif-containing 5 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
 Frame = +3

Query  918  QAAMQMLKETINEEAAE  968
            QAA++ML +   +EA E
Sbjct  143  QAALEMLRQK-QQEAEE  158


 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  1133  YPSFINFSY  1107
             Y  F+NF Y
Sbjct  336   YQTFVNFNY  344


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3962  VAIFLDY  3942
             V +FLDY
Sbjct  438   VGVFLDY  444


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1911  CQEDG  1925
             CQEDG
Sbjct  106   CQEDG  110


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7787  FNITN  7801
             FNITN
Sbjct  452   FNITN  456


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1446  TNSATIMMQ  1472
             TNS T M Q
Sbjct  215   TNSETEMVQ  223


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6115  PKAMCKI  6135
             P AMC I
Sbjct  381   PDAMCNI  387


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3150  PVFRFLN  3130
             PVF +LN
Sbjct  472   PVFPYLN  478


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  6023  VLVNVTE  6043
             +LVNV E
Sbjct  5     ILVNVKE  11


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3436  VSCPIYIE  3413
             V CPI  E
Sbjct  13    VTCPICLE  20


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3632  SESELVNQ  3655
             SE E+V Q
Sbjct  217   SETEMVQQ  224


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 3/6 (50%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8874  REVLEW  8891
             R++L+W
Sbjct  189   RDILDW  194


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7925  SETIMV  7908
             SET MV
Sbjct  217   SETEMV  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 18/39 (46%)
 Frame = -1

Query  523  CPSICL----QP-S-DVSNRPG-------LTANRSSSLL  446
            CP ICL    QP S D     G       LTAN   S+L
Sbjct  15   CP-ICLELLTQPLSLDC----GHSFCQACLTANHKKSML  48


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +1

Query  8080  LERLT----LDC  8103
             LE LT    LDC
Sbjct  19    LELLTQPLSLDC  30


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  5133  HRGSHT  5150
             HRG HT
Sbjct  123   HRGHHT  128


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8960  AVLEVLR  8940
             A LE LR
Sbjct  144   AALEMLR  150


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8850  GSQGVTS  8830
             GSQ +TS
Sbjct  350   GSQSITS  356


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = -2

Query  6072  TMSFFHM-----L--KFS  6040
             T SFF       L  KFS
Sbjct  448   TVSFFNITNHGFLIYKFS  465


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8254  PICPLSY  8234
             P+C  SY
Sbjct  56    PVCRISY  62


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  5924  LFCASDAK  5947
             LFC  D K
Sbjct  104   LFCQEDGK  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2837  EKDSW  2851
             EK SW
Sbjct  166   EKASW  170


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2926  PYFNP  2912
             PY NP
Sbjct  475   PYLNP  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5353  LLDRGE  5370
             +LD GE
Sbjct  47    MLDKGE  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8523  QEEEE  8537
             QE EE
Sbjct  154   QEAEE  158


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE  EEE++
Sbjct  203   LE-KEEEDI  210


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4451  KPENF  4437
             KPE F
Sbjct  264   KPETF  268


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2516  GIRYQ  2530
             G RYQ
Sbjct  333   GTRYQ  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5024  ILGTSSI  5044
             ILG  SI
Sbjct  348   ILGSQSI  354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/14 (28%), Positives = 5/14 (35%), Gaps = 0/14 (0%)
 Frame = +2

Query  3272  IQKetwetwwteYW  3313
             I+K         YW
Sbjct  387   IEKNENYQPKYGYW  400


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2019  VPIALC  2002
             VP  LC
Sbjct  484   VPMTLC  489


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8081  LRDLL  8095
             LRD L
Sbjct  188   LRDIL  192


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  1565  KGLLE  1579
             KG+LE
Sbjct  282   KGMLE  286


>ref|NP_078987.3|  GTPase IMAP family member 6 [Homo sapiens]
 sp|Q6P9H5.1|GIMA6_HUMAN  RecName: Full=GTPase IMAP family member 6; AltName: Full=Immunity-associated 
nucleotide 6 protein; Short=IAN-6; Short=hIAN6; 
AltName: Full=Immunity-associated nucleotide 2 protein; 
Short=IAN-2; Short=hIAN2
 gb|EAL24483.1|  human immune associated nucleotide 2 [Homo sapiens]
 emb|CAH18208.1|  hypothetical protein [Homo sapiens]
Length=292

 GENE ID: 474344 GIMAP6 | GTPase, IMAP family member 6 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 14/29 (48%)
 Frame = +1

Query  8728  QGQGS-DIH*P-----LDGATS*YQLSQI  8796
             QGQGS D+  P     L+G      LSQI
Sbjct  255   QGQGSEDV--PGEESWLEG------LSQI  275


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 8/20 (40%)
 Frame = -1

Query  7552  PQELLIL*VSFHSQDSCLEL  7493
             P+EL        SQD  LEL
Sbjct  15    PEEL--------SQDPVLEL  26


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  4869  STQVDPELAD  4898
             S QV PE AD
Sbjct  101   SPQVSPEVAD  110


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  441  WASRELE  461
            WA  ELE
Sbjct  86   WAGKELE  92


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  2461  RLQEVY  2478
             RLQEV+
Sbjct  145   RLQEVF  150


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  9077  PVLGLSG  9097
             PVL LSG
Sbjct  22    PVLELSG  28


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5355  TRQRRAR  5375
             T QRR R
Sbjct  78    TSQRRSR  84


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2429  PHPVLL  2412
             PH VLL
Sbjct  123   PHAVLL  128


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8644  FTPKED  8661
             FT KED
Sbjct  162   FTRKED  167


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2890  LGKSDL  2907
             LGK DL
Sbjct  287   LGKADL  292


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2912  LGKSDL  2895
             LGK DL
Sbjct  287   LGKADL  292


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5216  WLHGLGQ  5236
             WL GL Q
Sbjct  268   WLEGLSQ  274


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  8300  PRRIRQGLERILL  8338
             PRR R  L  IL+
Sbjct  38    PRRLR--L--ILM  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8404  DELSQ  8418
             +ELSQ
Sbjct  16    EELSQ  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 12/37 (32%), Positives = 13/37 (35%), Gaps = 20/37 (54%)
 Frame = -1

Query  7501  LELLDAPDCELQQMLLRLNSPQ----------Q-IVL  7424
             LE  D P+      L    SPQ          Q IVL
Sbjct  91    LEVIDTPN-----IL----SPQVSPEVADAICQAIVL  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6005  PNPQEVVLV  6031
             P P+ V LV
Sbjct  121   PGPHAVLLV  129


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6138  PHSVL  6152
             PH VL
Sbjct  123   PHAVL  127


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             +LREL
Sbjct  211   QLREL  215


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -3

Query  5939  LMHKIE---W  5919
             LM K+E   W
Sbjct  215   LMEKVEAIMW  224


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  296  TPKIL  310
            TP IL
Sbjct  96   TPNIL  100


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7490  KQLQAR  7507
             K+LQ R
Sbjct  246   KELQER  251


>ref|NP_001874.2|  corticotropin-releasing factor receptor 2 precursor [Homo sapiens]
Length=411

 GENE ID: 1395 CRHR2 | corticotropin releasing hormone receptor 2 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = -3

Query  5306  AVVAEFLLWLPL  5271
             A VA FLL L L
Sbjct  130   ALVAAFLLFLAL  141


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 4/20 (20%)
 Frame = -1

Query  2662  YI-Q--IIHVLIDNYVWILF  2612
             YI Q  II VL  N+V  LF
Sbjct  266   YIYQGPIILVLLINFV-FLF  284


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6456  LHFRIA  6439
             LH+RIA
Sbjct  111   LHYRIA  116


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  7120  RAAINKRW--W  7146
             R A+ KRW  W
Sbjct  367   RSAVRKRWHRW  377


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6023  LLLVGWG  6003
             LLL GWG
Sbjct  22    LLLDGWG  28


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = +2

Query  6872  DPEIVTHSFNCGGEFFYCNST  6934
             DPE         G + YCN T
Sbjct  32    DPE---------GPYSYCNTT  43


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  4563  LLGTTFM  4543
             LLG T+M
Sbjct  318   LLGITYM  324


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = +1

Query  8524  KRRRRWVFQSH--LR  8562
             KR  RW  Q H  LR
Sbjct  372   KRWHRW--QDHHSLR  384


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  108  HTLLEA  91
            H LLEA
Sbjct  7    HSLLEA  12


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -1

Query  6736  FSYCNKCSPWSSLD  6695
             +SYCN       LD
Sbjct  37    YSYCN-----TTLD  45


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 8/22 (36%)
 Frame = -1

Query  3868  YR-------WQVKIT-SHCSPI  3827
             YR       W  KI  S+C PI
Sbjct  80    YRECLENGTWASKINYSQCEPI  101


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = -1

Query  1606  FI-WCPSFP  1583
             FI WC  FP
Sbjct  229   FIGWCIPFP  237


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  3745  FIYLFISSNSF  3713
             FIY F   NSF
Sbjct  340   FIY-F---NSF  346


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/19 (52%), Positives = 10/19 (52%), Gaps = 7/19 (36%)
 Frame = -3

Query  4730  M-RAFIVMSIKPSP---SF  4686
             M RA   MSI  SP   SF
Sbjct  387   MARA---MSIPTSPTRISF  402


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +2

Query  2249  PENPY---NT  2269
             PE PY   NT
Sbjct  33    PEGPYSYCNT  42


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  8927  PRAASGVLQE  8956
             PR A G L E
Sbjct  52    PRSAAGALVE  61


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2415  VTDFF  2401
             VT+FF
Sbjct  196   VTNFF  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  2420  VLLLIFSFL  2394
             VLL  F FL
Sbjct  275   VLLINFVFL  283


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  3999  TRITFPS  3979
             TRI F S
Sbjct  398   TRISFHS  404


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7927  PPPNPEG  7947
             PP +PEG
Sbjct  29    PPLDPEG  35


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6288  MHFFIN  6305
             M FF+N
Sbjct  324   MLFFVN  329


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  8253  LSVPSATAMAV  8221
             L VP A AM +
Sbjct  383   LRVPMARAMSI  393


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -1

Query  1051  VP---AMSLP  1031
             VP   AMS P
Sbjct  385   VPMARAMSIP  394


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5342  AMSTPNS  5322
             AMS P S
Sbjct  390   AMSIPTS  396


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1846  PYLYCD  1829
             PY YC+
Sbjct  36    PYSYCN  41


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6785  NNTLKQI  6805
             N TL QI
Sbjct  41    NTTLDQI  47


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2767  FFLMF  2753
             FF MF
Sbjct  199   FFWMF  203


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3764  RKVLFL  3781
             RK LFL
Sbjct  223   RKCLFL  228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5478  AMKATL  5461
             A KATL
Sbjct  308   AVKATL  313


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6733  KNRKYE  6750
             K RKY+
Sbjct  105   KQRKYD  110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6189  PIVVA  6203
             PI+VA
Sbjct  237   PIIVA  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  3849  SLAIALQLL  3823
             SLA A +LL
Sbjct  15    SLALAEELL  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  6542  QLLLNG  6559
             +LLL+G
Sbjct  21    ELLLDG  26


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2200  RNLYRD  2217
             RN YR+
Sbjct  77    RNAYRE  82


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2957  LWFL  2946
             +WFL
Sbjct  165   MWFL  168


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1934  FLVSIF  1917
             F VS+F
Sbjct  353   FFVSVF  358


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5162  LELLEEL  5182
             L L EEL
Sbjct  16    LALAEEL  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  1474  EAILGTKER  1500
             E IL  K+R
Sbjct  99    EPILDDKQR  107


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3798  ALSIP  3784
             A+SIP
Sbjct  390   AMSIP  394


>sp|Q9UKJ1.3|PILRA_HUMAN  RecName: Full=Paired immunoglobulin-like type 2 receptor alpha; 
AltName: Full=Inhibitory receptor PILR-alpha; AltName: Full=Cell 
surface receptor FDF03; Flags: Precursor
Length=303

 GENE ID: 29992 PILRA | paired immunoglobin-like type 2 receptor alpha
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.7 bits (46),  Expect =   545
 Identities = 8/10 (80%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = +3

Query  7662  GTEKLTITQA  7691
             GT KL ITQA
Sbjct  144   GT-KLSITQA  152


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 7/21 (33%)
 Frame = +1

Query  3013  QRDSKRTSTWSVL*PIKRLNS  3075
             QR S  T TW       RL S
Sbjct  158   QRPSSMTTTW-------RLSS  171


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 13/25 (52%)
 Frame = +3

Query  1218  DYVDRFYKTLRAEQASQEVKNWMTE  1292
             DYV+R +  L          NW TE
Sbjct  92    DYVNRLF--L----------NW-TE  103


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2681  GQHRTK  2698
             GQ+RTK
Sbjct  225   GQQRTK  230


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +2

Query  5822  GTMLLGMLMIC  5854
             G M LG  +IC
Sbjct  208   GIMILG--LIC  216


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  207  RKGNQR  224
            RKG QR
Sbjct  223  RKGQQR  228


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3077  LLLSLL  3060
             LLL LL
Sbjct  5     LLLPLL  10


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8062  PLQLPP  8079
             PL LPP
Sbjct  11    PLLLPP  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  3071  IAEIQKQGQ  3097
             I   QKQ Q
Sbjct  112   ISNLQKQDQ  120


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6624  IMVLAL  6607
             IM+L L
Sbjct  209   IMILGL  214


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = -2

Query  9033  PQSRPGHASLESPQ  8992
             P   P H  L SPQ
Sbjct  280   PRAPPSHRPLKSPQ  293


 Score = 16.8 bits (32),  Expect(2) = 25841
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5389  LLAPFLALL  5363
             LL P L LL
Sbjct  5     LLLPLLPLL  13


 Score = 15.5 bits (29),  Expect(2) = 25841
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5260  IPISF  5246
             IP SF
Sbjct  51    IPFSF  55


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/21 (28%), Positives = 7/21 (33%), Gaps = 13/21 (61%)
 Frame = -1

Query  3919  FSF*LTFITAGYYFFCYYRWQ  3857
             FSF             YY W+
Sbjct  53    FSF-------------YYPWE  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 10/20 (50%)
 Frame = +3

Query  4839  VSIEWRKKR--------YST  4874
             V I WR  R        YST
Sbjct  67    VRISWR--RGHFHRQSFYST  84


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5143  LPLWPL  5126
             LPL PL
Sbjct  7     LPLLPL  12


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  7033  FYSAWE  7016
             FY  WE
Sbjct  55    FYYPWE  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7848  TKPPTI  7831
             T PP I
Sbjct  84    TRPPSI  89


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2928  NYVNSL  2945
             +YVN L
Sbjct  92    DYVNRL  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  262  HGKRR  276
            +GKRR
Sbjct  182  QGKRR  186


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3125  EPFKN  3139
             EPF N
Sbjct  237   EPFQN  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -2

Query  1902  SSNTVSSAPVSNR  1864
             SS T   AP S R
Sbjct  275   SSSTSPRAPPSHR  287


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  7190  DMRDNWR  7210
             D R  WR
Sbjct  66    DVRISWR  72


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8905  RLSNLH  8888
             R SNL+
Sbjct  111   RISNLQ  116


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8965  IELATR  8982
             +EL TR
Sbjct  127   VELDTR  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  8717  ELHTRARG  8740
             EL TR  G
Sbjct  128   ELDTRSSG  135


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5389  DPRLEP  5406
             DP L P
Sbjct  257   DPKLNP  262


>pdb|2WII|A  Chain A, Complement C3b In Complex With Factor H Domains 1-4
 pdb|2WIN|A  Chain A, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|C  Chain C, C3 Convertase (C3bbb) Stabilized By Scin
 8 more sequence titles
 pdb|2WIN|E  Chain E, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|G  Chain G, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|3L3O|A  Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
 pdb|3L3O|D  Chain D, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
 pdb|3L5N|A  Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3b
 pdb|3NMS|A  Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement C3c
 pdb|3NSA|A  Chain A, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
 pdb|3NSA|D  Chain D, Staphylococcal Complement Inhibitor (Scin) In Complex 
With Human Complement Component C3c
Length=645


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   553
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  420   QALPYST--VGNS  430


 Score = 18.0 bits (35),  Expect(2) =   553
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  424   YS------TVGNSNN  432


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  140   TVMVNI  145


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  97    KVVLVSLQ--SGY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  190   NSPQQV  195


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2801  DGVHNP  2784
             DGV+NP
Sbjct  287   DGVQNP  292


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  564   EGDHGARVVLVAV  576


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  221   YYIYN  225


 Score = 17.6 bits (34),  Expect(2) = 10998
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  95   VEKVVLVSL  103


 Score = 15.9 bits (30),  Expect(2) = 10998
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  69   PANRE  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  172   DIPELVNMG  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  223   IY---NEKGLEVTI  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  215   EPTEKFYY  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  260   ISLPES  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  331   YQIHFTKTPKY  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  347   PFDLMVFVTNP  357


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  434   LHLSVLRTELRP  445


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  48    SSEKTVLTP  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  66    FTIP  69


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  117   YTPGSTVLY  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  403   RTKKQEL  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  180  GQWKIRAY  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  467   YYTYLI  472


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  580   VFVLNKK--------------NKLTQSKIWDV  597


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  12    LRLESEETMVL  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  52    TVLTPA  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  266   LKRIP  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  320   ERSGIP  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  325   PIVT  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  348   FDLMV  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  470   YLIM  473


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  495   LPLSI  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  506   SFRL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  211   EVI-VEPTEKF  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  258   QRISLPE  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  258   QRISL  262


>pdb|2HR0|A  Chain A, Structure Of Complement C3b: Insights Into Complement 
Activation And Regulation
 pdb|2I07|A  Chain A, Human Complement Component C3b
Length=645


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   553
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  420   QALPYST--VGNS  430


 Score = 18.0 bits (35),  Expect(2) =   553
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  424   YS------TVGNSNN  432


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  140   TVMVNI  145


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  97    KVVLVSLQ--SGY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  190   NSPQQV  195


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  564   EGDHGARVVLVAV  576


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  221   YYIYN  225


 Score = 17.6 bits (34),  Expect(2) = 10998
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  95   VEKVVLVSL  103


 Score = 15.9 bits (30),  Expect(2) = 10998
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  69   PANRE  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  172   DIPELVNMG  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  223   IY---NEKGLEVTI  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  215   EPTEKFYY  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  260   ISLPES  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  331   YQIHFTKTPKY  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  347   PFDLMVFVTNP  357


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  434   LHLSVLRTELRP  445


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  48    SSEKTVLTP  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  66    FTIP  69


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  117   YTPGSTVLY  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  403   RTKKQEL  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  180  GQWKIRAY  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  467   YYTYLI  472


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  580   VFVLNKK--------------NKLTQSKIWDV  597


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  12    LRLESEETMVL  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  52    TVLTPA  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  266   LKRIP  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  320   ERSGIP  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  325   PIVT  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  348   FDLMV  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  470   YLIM  473


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  495   LPLSI  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  506   SFRL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  211   EVI-VEPTEKF  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  258   QRISLPE  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  258   QRISL  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  292   LRAE  295


>pdb|3G6J|A  Chain A, C3b In Complex With A C3b Specific Fab
 pdb|3G6J|C  Chain C, C3b In Complex With A C3b Specific Fab
Length=644


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   553
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  420   QALPYST--VGNS  430


 Score = 18.0 bits (35),  Expect(2) =   553
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  424   YS------TVGNSNN  432


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  140   TVMVNI  145


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  97    KVVLVSLQ--SGY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  190   NSPQQV  195


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  2801  DGVHNP  2784
             DGV+NP
Sbjct  287   DGVQNP  292


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  564   EGDHGARVVLVAV  576


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  221   YYIYN  225


 Score = 17.6 bits (34),  Expect(2) = 11004
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  95   VEKVVLVSL  103


 Score = 15.9 bits (30),  Expect(2) = 11004
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  69   PANRE  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  172   DIPELVNMG  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  223   IY---NEKGLEVTI  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  215   EPTEKFYY  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  260   ISLPES  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  331   YQIHFTKTPKY  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  347   PFDLMVFVTNP  357


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  434   LHLSVLRTELRP  445


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  48    SSEKTVLTP  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  66    FTIP  69


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  117   YTPGSTVLY  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  403   RTKKQEL  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  180  GQWKIRAY  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  467   YYTYLI  472


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  580   VFVLNKK--------------NKLTQSKIWDV  597


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  12    LRLESEETMVL  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  52    TVLTPA  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  266   LKRIP  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  320   ERSGIP  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  325   PIVT  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  348   FDLMV  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  470   YLIM  473


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  495   LPLSI  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  506   SFRL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  211   EVI-VEPTEKF  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  258   QRISLPE  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  258   QRISL  262


>pdb|2A73|A  Chain A, Human Complement Component C3
 pdb|2A74|A  Chain A, Human Complement Component C3c
 pdb|2A74|D  Chain D, Human Complement Component C3c
 pdb|2QKI|A  Chain A, Human C3c In Complex With The Inhibitor Compstatin
 pdb|2QKI|D  Chain D, Human C3c In Complex With The Inhibitor Compstatin
Length=643


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   553
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  420   QALPYST--VGNS  430


 Score = 18.0 bits (35),  Expect(2) =   553
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  424   YS------TVGNSNN  432


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  140   TVMVNI  145


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  97    KVVLVSLQ--SGY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  190   NSPQQV  195


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  564   EGDHGARVVLVAV  576


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  221   YYIYN  225


 Score = 17.6 bits (34),  Expect(2) = 11010
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  95   VEKVVLVSL  103


 Score = 15.9 bits (30),  Expect(2) = 11010
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  69   PANRE  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  172   DIPELVNMG  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  223   IY---NEKGLEVTI  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  215   EPTEKFYY  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  260   ISLPES  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  331   YQIHFTKTPKY  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  347   PFDLMVFVTNP  357


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  434   LHLSVLRTELRP  445


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  48    SSEKTVLTP  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  66    FTIP  69


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  117   YTPGSTVLY  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  403   RTKKQEL  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  180  GQWKIRAY  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  467   YYTYLI  472


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  580   VFVLNKK--------------NKLTQSKIWDV  597


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  12    LRLESEETMVL  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  52    TVLTPA  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  266   LKRIP  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  320   ERSGIP  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  325   PIVT  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  348   FDLMV  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  470   YLIM  473


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  495   LPLSI  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  506   SFRL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  211   EVI-VEPTEKF  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  258   QRISLPE  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  258   QRISL  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  292   LRAE  295


>pdb|2ICE|A  Chain A, Crig Bound To C3c
 pdb|2ICE|D  Chain D, Crig Bound To C3c
 pdb|2ICF|A  Chain A, Crig Bound To C3b
Length=642


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.4 bits (43),  Expect(2) =   553
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -1

Query  8323  QALSYSSRYVANS  8285
             QAL YS   V NS
Sbjct  420   QALPYST--VGNS  430


 Score = 18.0 bits (35),  Expect(2) =   553
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = -3

Query  8198  YSLVPDSNTVGDSTN  8154
             YS      TVG+S N
Sbjct  424   YS------TVGNSNN  432


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  7919  TIMVNI  7902
             T+MVNI
Sbjct  140   TVMVNI  145


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/13 (53%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = +2

Query  3986  KVILVAVHVASGY  4024
             KV+LV  +  SGY
Sbjct  97    KVVLVSLQ--SGY  107


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7447  NSPQQI  7430
             NSPQQ+
Sbjct  190   NSPQQV  195


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +2

Query  3980  EG----KVILVAV  4006
             EG     V+LVAV
Sbjct  564   EGDHGARVVLVAV  576


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8269  YYFYN  8255
             YY YN
Sbjct  221   YYIYN  225


 Score = 17.6 bits (34),  Expect(2) = 11017
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  236  VERAPLVSL  210
            VE   LVSL
Sbjct  95   VEKVVLVSL  103


 Score = 15.9 bits (30),  Expect(2) = 11017
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  241  PASRE  227
            PA RE
Sbjct  69   PANRE  73


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5785  EISALVEMG  5811
             +I  LV MG
Sbjct  172   DIPELVNMG  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +2

Query  3539  IYLALQDSGLEVNI  3580
             IY    + GLEV I
Sbjct  223   IY---NEKGLEVTI  233


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  1436  EPSNKFSY  1459
             EP  KF Y
Sbjct  215   EPTEKFYY  222


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7906  ISLPNS  7889
             ISLP S
Sbjct  260   ISLPES  265


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -3

Query  7223  YIIHFSNCPSY  7191
             Y IHF   P Y
Sbjct  331   YQIHFTKTPKY  341


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  2812  PFIRMEFITHP  2780
             PF  M F+T P
Sbjct  347   PFDLMVFVTNP  357


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +3

Query  6585  LDLSISRTMLKP  6620
             L LS+ RT L P
Sbjct  434   LHLSVLRTELRP  445


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7875  STAKTILKP  7849
             S  KT+L P
Sbjct  48    SSEKTVLTP  56


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2483  FTIP  2494
             FTIP
Sbjct  66    FTIP  69


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             YTPG  V Y
Sbjct  117   YTPGSTVLY  125


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2690  RTKIEEL  2710
             RTK +EL
Sbjct  403   RTKKQEL  409


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  754  GKWYIRPY  777
            G W IR Y
Sbjct  180  GQWKIRAY  187


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1993  FYEYLI  1976
             +Y YLI
Sbjct  467   YYTYLI  472


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 10/32 (31%), Positives = 11/32 (34%), Gaps = 15/32 (46%)
 Frame = +2

Query  2273  VFAIKKKDSTKWRKLVDFRELNKRTQ-DFWEV  2365
             VF   KK              NK TQ   W+V
Sbjct  580   VFVLNKK--------------NKLTQSKIWDV  597


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7456  LRLNSPQQIVL  7424
             LRL S +  VL
Sbjct  12    LRLESEETMVL  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4377  TILSPA  4360
             T+L PA
Sbjct  52    TVLTPA  57


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1685  LKKIP  1671
             LK IP
Sbjct  266   LKRIP  270


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  2761  ERTSIP  2778
             ER  IP
Sbjct  320   ERSGIP  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  6732  PIVT  6721
             PIVT
Sbjct  325   PIVT  328


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3632  FDLVV  3618
             FDL V
Sbjct  348   FDLMV  352


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  5012  YLVM  5001
             YL+M
Sbjct  470   YLIM  473


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4131  LPLSV  4117
             LPLS+
Sbjct  495   LPLSI  499


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  5436  SFRL  5425
             SFRL
Sbjct  506   SFRL  509


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6017  EVVLVNVTENF  6049
             EV+ V  TE F
Sbjct  211   EVI-VEPTEKF  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2819  QPIVLPE  2839
             Q I LPE
Sbjct  258   QRISLPE  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6401  QRIPL  6387
             QRI L
Sbjct  258   QRISL  262


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  292   LRAE  295


>ref|NP_003916.1|  methyl-CpG-binding domain protein 4 [Homo sapiens]
Length=580

 GENE ID: 8930 MBD4 | methyl-CpG binding domain protein 4 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.8 bits (44),  Expect(2) =   558
 Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 5/22 (22%)
 Frame = +2

Query  6536  STQLLLNGSLAEEEVVIRSVNF  6601
             ST+LLL     E+E V   VNF
Sbjct  209   STHLLLK----EDEGVD-DVNF  225


 Score = 17.6 bits (34),  Expect(2) =   558
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6709  RESIC  6723
             RES+C
Sbjct  264   RESVC  268


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = -1

Query  430  FNLYFFFPPGLNRIFSHRSNS  368
            F+ YF  P GL   F  RS S
Sbjct  106  FDVYFISPQGLK--F--RSKS  122


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1686  SEENSL  1669
             SEENSL
Sbjct  304   SEENSL  309


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  4465  QKSTLERT  4488
             QKS L+RT
Sbjct  280   QKSQLDRT  287


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +3

Query  2349  KTSGKFN*EYHI-PQG  2393
             KT G F+  Y I PQG
Sbjct  101   KTAGRFD-VYFISPQG  115


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LIAT+F
Sbjct  460   LIATIF  465


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  966  EWDRVHP  986
            EW  VHP
Sbjct  552  EWKQVHP  558


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8543  THLLL  8529
             THLLL
Sbjct  210   THLLL  214


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8205  TALFFSS  8185
             T L+FSS
Sbjct  414   TSLYFSS  420


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  4451  KPENFE  4434
             KPE+F+
Sbjct  137   KPEDFD  142


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1563  KKGCWK  1580
             KKGC K
Sbjct  247   KKGCRK  252


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 11/39 (28%), Positives = 12/39 (30%), Gaps = 22/39 (56%)
 Frame = +1

Query  2170  IDRRKNKSISRNLY-------------RDGKGRENFKNW  2247
             I+RRK       LY             R    R  FK W
Sbjct  409   IERRKT-----SLYFSSKYNKEALSPPR----RKAFKKW  438


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  2113  LNRANGK  2093
             LNR  GK
Sbjct  466   LNRTSGK  472


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +3

Query  7158  MSPRSS-DLEE  7187
             M P SS +L+E
Sbjct  190   MPPSSSSELQE  200


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3013  QRDSKR  3030
             Q DSKR
Sbjct  259   QSDSKR  264


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8106  RGLWNF  8123
             RGL NF
Sbjct  202   RGLSNF  207


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7869  AKTILK  7852
             AKTI K
Sbjct  513   AKTIVK  518


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  3101  QWTYQI  3118
             QW Y I
Sbjct  527   QWKYPI  532


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -3

Query  1700  WLW  1692
             WLW
Sbjct  569   WLW  571


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7433  NCSAAAL  7413
             +CS AAL
Sbjct  157   DCSMAAL  163


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  163  CGKSLAVAPEQ  195
            CG  L V  E+
Sbjct  296  CGETLSVTSEE  306


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  6919  EKFPS  6905
             EK+PS
Sbjct  483   EKYPS  487


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3649  QSNN  3660
             QSNN
Sbjct  170   QSNN  173


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  6404  AQRIPLDRPV  6375
             AQ   LDR V
Sbjct  279   AQKSQLDRTV  288


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  2285  LWQILE  2268
             LW  LE
Sbjct  478   LWKFLE  483


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  6582  TTSSSARL  6559
             T  SS RL
Sbjct  19    TVTSSERL  26


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  3027  KNQYMECIM  3053
             K  Y +C M
Sbjct  152   KSRYKDCSM  160


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6859  ILRRG  6873
             IL RG
Sbjct  375   ILKRG  379


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4845  IEWRK  4859
             IE RK
Sbjct  409   IERRK  413


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  7291  ERKKSS  7308
             ER K S
Sbjct  410   ERRKTS  415


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  3053  DPSKDLIAEI  3082
             DP K LIA I
Sbjct  455   DPWKLLIATI  464


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7681  IVNFS  7667
             IV FS
Sbjct  516   IVKFS  520


>gb|AAY57122.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=123


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 20.6 bits (41),  Expect(2) =   600
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.3 bits (38),  Expect(2) =   600
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  3211  AKNNHR  3228
             AKNN+R
Sbjct  99    AKNNQR  104


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = -1

Query  8299  YVANSSTSSLYY  8264
             Y+  SS S  YY
Sbjct  50    YISSSS-STIYY  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7622  IYYSN  7608
             IYY +
Sbjct  58    IYYAD  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


>gb|ACA28841.1|  T cell receptor variable alpha 38 chain [Homo sapiens]
Length=281


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 21.0 bits (42),  Expect(2) =   652
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  143   QNPDPAVYQ  151


 Score = 18.5 bits (36),  Expect(2) =   652
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 13/25 (52%)
 Frame = +2

Query  2429  GDA--YFSVPLDEDFRKYTAFTIPS  2497
             GDA  YF            A+T+PS
Sbjct  105   GDAAMYFC-----------AYTVPS  118


 Score = 21.8 bits (44),  Expect =   981
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  6589  SNYYLF  6572
             S+YYLF
Sbjct  50    SDYYLF  55


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  8145  PSNIGGISY  8171
             PSN GG SY
Sbjct  117   PSNAGGTSY  125


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1211  GFLWSL  1194
             GFLW L
Sbjct  5     GFLWAL  10


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  205   WSNKS  209


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = -2

Query  7494  CL---MPQTV  7474
             CL   M QTV
Sbjct  15    CLEFSMAQTV  24


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4591  SIIPND  4574
             SIIP D
Sbjct  220   SIIPED  225


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = -1

Query  5161  CP-FIVWLPLWPLV  5123
             CP F     LW LV
Sbjct  3     CPGF-----LWALV  11


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  7664  PTPSRSCDSK  7635
             P P  SCD K
Sbjct  229   PSPESSCDVK  238


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6099  LIISSC  6082
             L+IS C
Sbjct  10    LVISTC  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7004  DTITLPC  7024
             +T+TL C
Sbjct  37    ETVTLSC  43


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4072  FSFKIS  4089
             FS KIS
Sbjct  95    FSLKIS  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  9076  ACTGSLW  9096
             AC G LW
Sbjct  2     ACPGFLW  8


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  462  RFAVN  476
            RF VN
Sbjct  83   RFSVN  87


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1673  EFSSEQT  1693
             EFS  QT
Sbjct  17    EFSMAQT  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  3516  IRRLSYKQ  3539
             IR   YKQ
Sbjct  69    IRQEAYKQ  76


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6590  SVNFTDNAK  6616
             SVNF   AK
Sbjct  85    SVNFQKAAK  93


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  7428  FCCCTIPDN  7402
             FC  T+P N
Sbjct  111   FCAYTVPSN  119


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  161   SVCLF  165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1772  YRLLLL  1755
             +R LLL
Sbjct  260   FRILLL  265


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  6045  FSVTF  6031
             FSV F
Sbjct  84    FSVNF  88


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4339  FSFKIVD  4319
             FS KI D
Sbjct  95    FSLKISD  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  151   QLRDSKSSD  159


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  206   SNKSDFAC  213


>ref|NP_116220.1|  putative protein ORAI2-2 [Homo sapiens]
 ref|NP_001119812.1|  putative protein ORAI2-2 [Homo sapiens]
 sp|Q96SN7.1|ORAI2_HUMAN  RecName: Full=Protein orai-2; AltName: Full=Transmembrane protein 
142B; AltName: Full=CAP-binding protein complex-interacting 
protein 2
Length=254

 GENE ID: 80228 ORAI2 | ORAI calcium release-activated calcium modulator 2
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect(2) =   666
 Identities = 10/30 (33%), Positives = 11/30 (36%), Gaps = 17/30 (56%)
 Frame = -1

Query  6658  TINFYRCVQLYYYGFSIV--------REID  6593
             TI FYR         S V        REI+
Sbjct  215   TIHFYR---------SLVRHKTERHNREIE  235


 Score = 17.2 bits (33),  Expect(2) =   666
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6750  LIFPIFPI  6727
             LIF +F I
Sbjct  209   LIFVVFTI  216


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3367  IMVPV  3381
             IMVPV
Sbjct  203   IMVPV  207


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5911  SNHHSI  5928
             SNHHS+
Sbjct  40    SNHHSV  45


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3992  ILVAVH  4009
             +LVAVH
Sbjct  103   VLVAVH  108


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  9053  LHISSCFLP  9079
             L IS C LP
Sbjct  112   LLISTCILP  120


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  6099  LIISSCI  6079
             L IS CI
Sbjct  112   LLISTCI  118


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 1/12 (8%)
 Frame = -2

Query  8805  LLSYLAQLVLAC  8770
             LL +LA+ VL C
Sbjct  159   LL-FLAEVVLLC  169


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             P PPP P
Sbjct  182   PGPPPGP  188


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 10/26 (38%)
 Frame = -1

Query  8323  QALS----YSSRYVA----NSSTSSL  8270
             QALS    Y SR  A     S TS L
Sbjct  46    QALSWRKLYLSR--AKLKASSRTSAL  69


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4719  ESPHPR  4736
             ESPH R
Sbjct  136   ESPHER  141


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -3

Query  7421  AALYQTIIVWPVP  7383
             AAL  TII   VP
Sbjct  196   AALVSTIIM--VP  206


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = -2

Query  4434  IFV---ICFCNSLV  4402
             IFV   I F  SLV
Sbjct  210   IFVVFTIHFYRSLV  223


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  3952  SWTTVYLS  3929
             SW   YLS
Sbjct  49    SWRKLYLS  56


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2699  IEEL  2710
             IEEL
Sbjct  234   IEEL  237


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7678  QLHKL  7692
             +LHKL
Sbjct  236   ELHKL  240


 Score = 15.5 bits (29),  Expect(2) = 48461
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2623  RHSYL  2637
             R SYL
Sbjct  31    RRSYL  35


 Score = 15.5 bits (29),  Expect(2) = 48461
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2752  KTSERTS  2772
             K S RTS
Sbjct  61    KASSRTS  67


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 15/28 (53%)
 Frame = +3

Query  4815  RDW-------------HLGQGVSIEWRK  4859
             RDW             H  Q  S  WRK
Sbjct  27    RDWVRRSYLELVTSNHHSVQALS--WRK  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4305  CTAVL  4291
             CT VL
Sbjct  100   CTTVL  104


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  8966  MSAVLEV  8946
             MSA L V
Sbjct  1     MSAELNV  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  5993  VPTDP  6007
             VP DP
Sbjct  7     VPIDP  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  5224  WLRATYL  5244
             W R  YL
Sbjct  29    WVRRSYL  35


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6486  VQMSAQY  6506
             VQ+  QY
Sbjct  81    VQLETQY  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  6915  FSTV  6926
             FSTV
Sbjct  152   FSTV  155


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7927  PPPNP  7941
             PPP P
Sbjct  184   PPPGP  188


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7905  IHHYR  7919
             IH YR
Sbjct  216   IHFYR  220


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4653  SLVKH  4667
             SLV H
Sbjct  221   SLVRH  225


>pdb|3LOH|E  Chain E, Structure Of The Insulin Receptor Ectodomain, Including 
Ct P
Length=917


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/24 (41%), Positives = 11/24 (45%), Gaps = 13/24 (54%)
 Frame = +3

Query  7623  LWNRFGITRPGWSGTEK--LTITQ  7688
             LW+        WS   K  LTITQ
Sbjct  411   LWD--------WS---KHNLTITQ  423


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  1325  TI-WVRILD  1302
             TI W RILD
Sbjct  130   TIDWSRILD  138


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  2843  DSWTVNDI  2866
             +SWTV DI
Sbjct  527   NSWTVVDI  534


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  1095  DYLSSILFVP  1066
             DYL  + FVP
Sbjct  707   DYLHNVVFVP  716


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4552  YFYVT  4538
             YFYVT
Sbjct  902   YFYVT  906


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  791  KCMGKSSRREG  823
            KC  K SRR+G
Sbjct  265  KC--KNSRRQG  273


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5315  HFQNW  5329
             HFQ+W
Sbjct  247   HFQDW  251


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 1/9 (11%)
 Frame = +1

Query  3103  MDI-SNLSR  3126
             MDI  NL R
Sbjct  11    MDIRNNLTR  19


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7339  QEPKE  7325
             QEPKE
Sbjct  833   QEPKE  837


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  3524  SSDLLC  3507
             SS+LLC
Sbjct  296   SSNLLC  301


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9176  TQGKLY  9159
             TQGKL+
Sbjct  422   TQGKLF  427


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  91   TQGKLY  74
            TQGKL+
Sbjct  422  TQGKLF  427


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  6443  SQNQPG  6426
             SQN+PG
Sbjct  545   SQNHPG  550


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6035  HLPILLL  6015
             HL ILL+
Sbjct  32    HLQILLM  38


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  523  CPSIC  509
            CP IC
Sbjct  192  CPTIC  196


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3154  ICKNEGC  3174
             ICK  GC
Sbjct  195   ICKSHGC  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -1

Query  2509  LIV-----YTRYG  2486
             LIV     Y RYG
Sbjct  841   LIVLYEVSYRRYG  853


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8292  RIALQA  8275
             RI LQA
Sbjct  780   RIELQA  785


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1194  QGPKEP  1211
             Q PKEP
Sbjct  833   QEPKEP  838


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  3669  NCSII  3655
             NCS+I
Sbjct  25    NCSVI  29


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6502  CADIC  6488
             C DIC
Sbjct  155   CGDIC  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  221  LVSLS  207
            LVSLS
Sbjct  376  LVSLS  380


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3411  VSAPTM  3394
             VSA TM
Sbjct  801   VSARTM  806


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2754  NIRKNL  2771
             +IR NL
Sbjct  12    DIRNNL  17


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3820  IFLMF  3806
             I LMF
Sbjct  35    ILLMF  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +3

Query  1785  YPLTSLRSLFGN  1820
             Y L SL  LF N
Sbjct  67    YGLESLKDLFPN  78


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5223  WSQIL  5209
             WS IL
Sbjct  133   WSRIL  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2805  INGQY  2819
             INGQ+
Sbjct  174   INGQF  178


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3984  PSKCV  3970
             P KCV
Sbjct  222   PTKCV  226


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7837  YYHYE  7823
             YYH++
Sbjct  245   YYHFQ  249


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  231  LDAGLGL  251
            L+A LGL
Sbjct  354  LEANLGL  360


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  6458  YYILESQN  6435
             +Y L+ QN
Sbjct  400   FYALDNQN  407


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -2

Query  2418  TVTD---FFFFNP  2389
             T+T    FF +NP
Sbjct  420   TITQGKLFFHYNP  432


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  5978  ATHACVPTDP  6007
             AT   VP DP
Sbjct  592   ATNPSVPLDP  601


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/23 (43%), Positives = 11/23 (47%), Gaps = 8/23 (34%)
 Frame = -1

Query  520  PSICLQPSDVSNRPGLTANRSSS  452
            PS+ L P  VSN        SSS
Sbjct  595  PSVPLDPISVSN--------SSS  609


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7447  NSPQQIVL  7424
             NS  QI+L
Sbjct  606   NSSSQIIL  613


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4566  KQRSLG  4583
             K RSLG
Sbjct  721   KRRSLG  726


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2459  HLREL  2445
             HL EL
Sbjct  100   HLKEL  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3413  FYVDG  3427
             FY DG
Sbjct  231   FYLDG  235


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/12 (41%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  1934  MIGGIGGFIKVR  1969
             +I  I G+ K+R
Sbjct  360   LIEEISGYLKIR  371


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  8755  VSGYL  8741
             +SGYL
Sbjct  364   ISGYL  368


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7670  EINNY  7684
             EI NY
Sbjct  394   EIGNY  398


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4185  RNLEFP  4202
             R+L FP
Sbjct  47    RDLSFP  52


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  916  CPPTV  902
            CP TV
Sbjct  169  CPATV  173


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1280  LDDRNL  1297
             LD+ NL
Sbjct  403   LDNQNL  408


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3798  PKMNMRN  3818
             P M+ RN
Sbjct  9     PGMDIRN  15


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6653  NCTRPNNNT  6679
             NC  P++ T
Sbjct  215   NCSQPDDPT  223


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2200  RNLYRDG  2220
             RN Y DG
Sbjct  229   RNFYLDG  235


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  8355  TCHPSY  8338
             TC P Y
Sbjct  240   TCPPPY  245


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  252   RCVNF  256


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3068  LIAEI  3082
             LI EI
Sbjct  360   LIEEI  364


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3503  TDTTN  3517
             TD TN
Sbjct  590   TDATN  594


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4625  RQDED  4639
             RQ ED
Sbjct  634   RQAED  638


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6925  TVEKFPST  6902
             TV  FP T
Sbjct  737   TVAAFPNT  744


>pdb|2WY3|A  Chain A, Structure Of The Hcmv Ul16-Micb Complex Elucidates Select 
Binding Of A Viral Immunoevasin To Diverse Nkg2d Ligands
 pdb|2WY3|C  Chain C, Structure Of The Hcmv Ul16-Micb Complex Elucidates Select 
Binding Of A Viral Immunoevasin To Diverse Nkg2d Ligands
Length=319


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6032  NVTENFNMWKND-M  6070
             NVT NF  WK D M
Sbjct  142   NVT-NF--WKEDAM  152


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2829  CCQKKT  2846
             CC KKT
Sbjct  308   CCKKKT  313


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  904  QWGDI  918
            QWGD+
Sbjct  230  QWGDV  234


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2078  QSESTDF  2058
             QS+ TDF
Sbjct  282   QSQRTDF  288


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5318  FQNWVST  5338
             +Q WV T
Sbjct  242   YQTWVAT  248


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  8601  LSHFLKEKGGLEGLIHSQRRQDI  8669
             L H   +KGGL    HS   Q+I
Sbjct  78    LTHIKDQKGGL----HSL--QEI  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9128  PESSQAQ  9108
             P+SS AQ
Sbjct  131   PQSSRAQ  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  43   PESSQAQ  23
            P+SS AQ
Sbjct  131  PQSSRAQ  137


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = -1

Query  4666  CFTKLFHVLILIL  4628
             CF     V I IL
Sbjct  297   CF-----VIIIIL  304


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8962  QQFLKY  8945
             Q FL Y
Sbjct  32    QPFLRY  37


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 10/18 (55%)
 Frame = +2

Query  608  DRDKRHQGSFRQDRGRAK  661
            DR KR          RAK
Sbjct  38   DRQKR----------RAK  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +2

Query  3497  TLTDTTNQKTELQAIYLALQD  3559
             TLT   +QK  L+     LQ+
Sbjct  77    TLTHIKDQKGGLH----SLQE  93


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3763  QESTI  3777
             QEST+
Sbjct  126   QESTV  130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8514  LEAQE  8528
             LE QE
Sbjct  123   LETQE  127


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             VN TC
Sbjct  187   VNVTC  191


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  743  EHPGANGT  766
            EH G  GT
Sbjct  263  EHSGNHGT  270


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7822  IHNDS  7836
             IH DS
Sbjct  99    IHEDS  103


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  1939  RGNWRFY  1959
             RG   FY
Sbjct  106   RGSRHFY  112


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5237  VALSH  5223
             V LSH
Sbjct  222   VSLSH  226


>pdb|3K6S|B  Chain B, Structure Of Integrin Alphaxbeta2 Ectodomain
 pdb|3K6S|D  Chain D, Structure Of Integrin Alphaxbeta2 Ectodomain
 pdb|3K6S|F  Chain F, Structure Of Integrin Alphaxbeta2 Ectodomain
 7 more sequence titles
 pdb|3K6S|H  Chain H, Structure Of Integrin Alphaxbeta2 Ectodomain
 pdb|3K71|B  Chain B, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K71|D  Chain D, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K71|F  Chain F, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K71|H  Chain H, Structure Of Integrin Alphax Beta2 Ectodomain
 pdb|3K72|B  Chain B, Structure Of Integrin Alphax Beta2
 pdb|3K72|D  Chain D, Structure Of Integrin Alphax Beta2
Length=687


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7764  NGQVCG  7781
             NGQVCG
Sbjct  523   NGQVCG  528


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/18 (50%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +2

Query  6581  VIRSVNFTDNAKTII-VQ  6631
             VIR   FTD    I+ VQ
Sbjct  405   VIRALGFTD----IVTVQ  418


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 9/18 (50%)
 Frame = -1

Query  4366  PCTVPPN------PPFSF  4331
             PC   PN      PPF F
Sbjct  168   PC---PNKEKECQPPFAF  182


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2960  LTEVIP  2977
             LTE+IP
Sbjct  311   LTEIIP  316


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  8579  DLQGSCR  8599
             +L+GSCR
Sbjct  470   ELEGSCR  476


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7935  QPRGD  7949
             QPRGD
Sbjct  373   QPRGD  377


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  1996  DFYEYLIILSY  1964
             D Y YL  LSY
Sbjct  106   DLY-YLMDLSY  115


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1068  EQIGW  1082
             E+IGW
Sbjct  226   EEIGW  230


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  1917  PGKLI  1903
             PGKLI
Sbjct  503   PGKLI  507


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1807  DLREVK  1790
             DLR VK
Sbjct  120   DLRNVK  125


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1586  KGRTPNER  1609
             KGRT  ER
Sbjct  636   KGRTCKER  643


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 1/14 (7%)
 Frame = +2

Query  3491  VVTLTDTTNQ-KTE  3529
             V  LT+  NQ  TE
Sbjct  185   VLKLTNNSNQFQTE  198


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4731  DEGFH  4717
             D+GFH
Sbjct  242   DDGFH  246


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  4801  CIQE  4812
             CIQE
Sbjct  398   CIQE  401


 Score = 15.9 bits (30),  Expect(2) = 22417
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6993  LKEVTQS  7013
             L E+T+S
Sbjct  135   LNEITES  141


 Score = 15.9 bits (30),  Expect(2) = 22417
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7062  EKQCMP  7079
             EK+C P
Sbjct  173   EKECQP  178


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6504  TVLTFV  6487
             TVL FV
Sbjct  153   TVLPFV  158


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  571  YNDLSS  554
            YN LSS
Sbjct  338  YNKLSS  343


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  5485  KLGNESNTF  5459
             KL N SN F
Sbjct  187   KLTNNSNQF  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  2604  LLENKIQ  2624
             L EN IQ
Sbjct  289   LAENNIQ  295


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8813  IGLFYL  8796
             I L+YL
Sbjct  105   IDLYYL  110


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4118  TDNGSNFTG  4144
             TD+G  F G
Sbjct  241   TDDGFHFAG  249


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7430  NLLRA  7444
             +LLRA
Sbjct  130   DLLRA  134


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7189  RYEGQ  7203
             RY GQ
Sbjct  521   RYNGQ  525


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  8979  CSKLDVSS  8956
             C K  VSS
Sbjct  3     CTKFKVSS  10


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8910  AFHHV  8924
             AF HV
Sbjct  181   AFRHV  185


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1428  EAMSQV  1445
             +AM QV
Sbjct  216   DAMMQV  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2136  GFNFTG  2119
             GF F G
Sbjct  244   GFHFAG  249


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  5305  QLLQNSY  5285
             QL  N Y
Sbjct  332   QLIKNAY  338


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4699  GFIDI  4713
             GF DI
Sbjct  410   GFTDI  414


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3388  RTHSRSRNL  3414
             R +SR R L
Sbjct  428   RDQSRDRSL  436


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1742  CLYPR  1728
             CL PR
Sbjct  560   CLNPR  564


>ref|NP_001157962.1|  disintegrin and metalloproteinase domain-containing protein 8 
isoform 3 precursor [Homo sapiens]
Length=733

 GENE ID: 101 ADAM8 | ADAM metallopeptidase domain 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6708  QGEHLLQ  6728
             Q EHLLQ
Sbjct  117   QAEHLLQ  123


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PPEDC
Sbjct  387   PPEDC  391


 Score = 18.5 bits (36),  Expect(2) =  2054
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5827  GAPSPPPSPQ  5798
             GAP P   PQ
Sbjct  650   GAPAPSRGPQ  659


 Score = 18.5 bits (36),  Expect(2) =  2054
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5815  PPPSPQV  5795
             PPP P V
Sbjct  683   PPPAPPV  689


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  4121  DN-----GSNFTGATV  4153
             DN     G +FTG TV
Sbjct  247   DNVQLITGVDFTGTTV  262


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1415  CLMAGS  1398
             C MAGS
Sbjct  323   CIMAGS  328


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
 Frame = +2

Query  2855  VNDIQKLVGKLN----------WASQ  2902
             VN + KL  KLN          W SQ
Sbjct  191   VNHVDKLYQKLNFRVVLVGLEIWNSQ  216


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5806  MGVEMGH  5826
             M  EMGH
Sbjct  293   MAHEMGH  299


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 12/30 (40%)
 Frame = -1

Query  9142  GSLVSQRA-----PR----LRSGLTRETQY  9080
             GSL   R      PR    L S   RET Y
Sbjct  136   GSLLGPRTAAVFRPRPGDSLPS---RETRY  162


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8252  RVIEVV  8269
             RV EVV
Sbjct  186   RVLEVV  191


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  2853  VQL----SFSGSTIG  2821
             VQL     F G T+G
Sbjct  249   VQLITGVDFTGTTVG  263


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3038  VLVLL  3024
             VLVLL
Sbjct  596   VLVLL  600


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 7/14 (50%)
 Frame = +2

Query  8918  SRGPRAASGVLQEL  8959
             SRGP       QEL
Sbjct  655   SRGP-------QEL  661


 Score = 16.3 bits (31),  Expect(2) = 18217
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  1095  PPIPVGEIYKR  1127
             PP PV  +Y R
Sbjct  694   PPFPV-PVYTR  703


 Score = 15.9 bits (30),  Expect(2) = 18217
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1191  RQGPKE  1208
             RQ PK+
Sbjct  703   RQAPKQ  708


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  247  PSPASRE  227
            P PA RE
Sbjct  15   PGPAPRE  21


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3422  DGAANR  3439
             DGAA R
Sbjct  61    DGAASR  66


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3995  LVAVHVASG  4021
             L  VH ASG
Sbjct  579   LTEVHAASG  587


 Score = 16.3 bits (31),  Expect(2) = 21807
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7552  PQEL  7541
             PQEL
Sbjct  658   PQEL  661


 Score = 15.5 bits (29),  Expect(2) = 21807
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7664  PTPSR  7650
             P PSR
Sbjct  652   PAPSR  656


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6605  DNAKTIIVQLNTSVE  6649
             DN     VQL T V+
Sbjct  247   DN-----VQLITGVD  256


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 6/21 (28%)
 Frame = +3

Query  2526  ISTMCFHRDG---KDHQQYSK  2579
             +S MC H  G    DH   SK
Sbjct  267   VSAMCSHSSGAVNQDH---SK  284


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7594  HSSGA  7580
             HSSGA
Sbjct  273   HSSGA  277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1642  RSG--LPTRE  1665
             R G  LP RE
Sbjct  150   RPGDSLPSRE  159


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1774  SIGSCF  1757
             SIGS F
Sbjct  328   SIGSSF  333


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6506  QCTHG  6520
             QC HG
Sbjct  408   QCAHG  412


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8699  ALCVVD  8682
             A C+VD
Sbjct  525   AICIVD  530


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1893  TVSSAP  1876
             TVSS P
Sbjct  690   TVSSPP  695


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = -3

Query  5969  YVPLY--------HML  5946
             YV LY        +ML
Sbjct  162   YVELYVVVDNAEFQML  177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6141  GVNFT  6127
             GV+FT
Sbjct  254   GVDFT  258


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8438  CSHPICC  8418
             C H  CC
Sbjct  409   CAHGTCC  415


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7281  EWCREKKE  7304
             E CR KK+
Sbjct  425   ELCRPKKD  432


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1534  CPSLPQ  1517
             CP L Q
Sbjct  469   CPTLAQ  474


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  8455  SR--SRDAAP  8432
             SR  SR+ AP
Sbjct  618   SRILSRNVAP  627


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  5995  THRPQPTR---SSI  6027
             TH  QP R   SS+
Sbjct  665   THPGQPARHPASSV  678


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5551  ELFVAV  5534
             EL+V V
Sbjct  164   ELYVVV  169


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8391  RERMRR  8408
             R+R RR
Sbjct  238   RQRTRR  243


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  226  ALSTQD  243
            AL T+D
Sbjct  534  ALTTED  539


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2812  DSTAY  2826
             D TAY
Sbjct  539   DGTAY  543


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6011  PQEVV  6025
             PQE V
Sbjct  658   PQELV  662


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4697  SPSFP  4683
             SP FP
Sbjct  693   SPPFP  697


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5147  VAPSVAL  5127
             V P VAL
Sbjct  711   VGPKVAL  717


>ref|NP_001157961.1|  disintegrin and metalloproteinase domain-containing protein 8 
isoform 2 precursor [Homo sapiens]
Length=742

 GENE ID: 101 ADAM8 | ADAM metallopeptidase domain 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6708  QGEHLLQ  6728
             Q EHLLQ
Sbjct  156   QAEHLLQ  162


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PPEDC
Sbjct  426   PPEDC  430


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4845  WRLPDP  4828
             WRLP P
Sbjct  35    WRLPGP  40


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6327  MILPAI  6344
             M LPAI
Sbjct  12    MMLPAI  17


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  4121  DN-----GSNFTGATV  4153
             DN     G +FTG TV
Sbjct  286   DNVQLITGVDFTGTTV  301


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1415  CLMAGS  1398
             C MAGS
Sbjct  362   CIMAGS  367


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
 Frame = +2

Query  2855  VNDIQKLVGKLN----------WASQ  2902
             VN + KL  KLN          W SQ
Sbjct  230   VNHVDKLYQKLNFRVVLVGLEIWNSQ  255


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5806  MGVEMGH  5826
             M  EMGH
Sbjct  332   MAHEMGH  338


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 12/30 (40%)
 Frame = -1

Query  9142  GSLVSQRA-----PR----LRSGLTRETQY  9080
             GSL   R      PR    L S   RET Y
Sbjct  175   GSLLGPRTAAVFRPRPGDSLPS---RETRY  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8252  RVIEVV  8269
             RV EVV
Sbjct  225   RVLEVV  230


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7439  SANCSA  7422
             S NCSA
Sbjct  610   SSNCSA  615


 Score = 17.2 bits (33),  Expect(2) = 10435
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 2/13 (15%)
 Frame = -1

Query  9046  RA--RHSPVPPRP  9014
             RA   H P P RP
Sbjct  669   RAGPHHPPGPARP  681


 Score = 16.3 bits (31),  Expect(2) = 10435
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  9032  PSPAQATP  9009
             P PA  TP
Sbjct  676   PGPARPTP  683


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  2853  VQL----SFSGSTIG  2821
             VQL     F G T+G
Sbjct  288   VQLITGVDFTGTTVG  302


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3304  RVLASHL  3324
             R L SHL
Sbjct  44    RALPSHL  50


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7929  TSQPRG  7946
             T QPRG
Sbjct  96    TEQPRG  101


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6605  DNAKTIIVQLNTSVE  6649
             DN     VQL T V+
Sbjct  286   DN-----VQLITGVD  295


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 6/21 (28%)
 Frame = +3

Query  2526  ISTMCFHRDG---KDHQQYSK  2579
             +S MC H  G    DH   SK
Sbjct  306   VSAMCSHSSGAVNQDH---SK  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7594  HSSGA  7580
             HSSGA
Sbjct  312   HSSGA  316


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4504  PEELCW  4487
             PE  CW
Sbjct  593   PEKVCW  598


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1642  RSG--LPTRE  1665
             R G  LP RE
Sbjct  189   RPGDSLPSRE  198


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1774  SIGSCF  1757
             SIGS F
Sbjct  367   SIGSSF  372


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6506  QCTHG  6520
             QC HG
Sbjct  447   QCAHG  451


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8699  ALCVVD  8682
             A C+VD
Sbjct  564   AICIVD  569


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6880  NCNAQ  6894
             NC AQ
Sbjct  612   NCSAQ  616


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = -2

Query  2448  TEKYASPTSSTVTD  2407
             TE Y     S VT+
Sbjct  84    TETYTAANGSEVTE  97


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4897  SASSGSTC  4874
             SA S STC
Sbjct  117   SAASLSTC  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = -3

Query  5969  YVPLY--------HML  5946
             YV LY        +ML
Sbjct  201   YVELYVVVDNAEFQML  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6141  GVNFT  6127
             GV+FT
Sbjct  293   GVDFT  297


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8438  CSHPICC  8418
             C H  CC
Sbjct  448   CAHGTCC  454


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7281  EWCREKKE  7304
             E CR KK+
Sbjct  464   ELCRPKKD  471


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1534  CPSLPQ  1517
             CP L Q
Sbjct  508   CPTLAQ  513


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  7896  GR--DIHHYR  7919
             GR  D H YR
Sbjct  600   GRCQDLHVYR  609


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4781  NNNILGSAY  4807
             N + LGS Y
Sbjct  75    NRDLLGSGY  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3744  LSTC  3733
             LSTC
Sbjct  121   LSTC  124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  531  PSLQTGSEE  557
            P L  GSEE
Sbjct  683  PGLLGGSEE  691


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  654  LPLSCL  637
            LP SCL
Sbjct  705  LPSSCL  710


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5404  PWKHPG  5421
             PW  PG
Sbjct  34    PWRLPG  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4836  PDPNASL  4816
             PD  ASL
Sbjct  115   PDSAASL  121


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5551  ELFVAV  5534
             EL+V V
Sbjct  203   ELYVVV  208


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8391  RERMRR  8408
             R+R RR
Sbjct  277   RQRTRR  282


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  226  ALSTQD  243
            AL T+D
Sbjct  573  ALTTED  578


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2812  DSTAY  2826
             D TAY
Sbjct  578   DGTAY  582


>ref|NP_001100.3|  disintegrin and metalloproteinase domain-containing protein 8 
isoform 1 precursor [Homo sapiens]
Length=824

 GENE ID: 101 ADAM8 | ADAM metallopeptidase domain 8 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6708  QGEHLLQ  6728
             Q EHLLQ
Sbjct  156   QAEHLLQ  162


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6870  PPEDC  6856
             PPEDC
Sbjct  426   PPEDC  430


 Score = 18.5 bits (36),  Expect(2) =  2008
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  5827  GAPSPPPSPQ  5798
             GAP P   PQ
Sbjct  715   GAPAPSRGPQ  724


 Score = 18.5 bits (36),  Expect(2) =  2008
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5815  PPPSPQV  5795
             PPP P V
Sbjct  748   PPPAPPV  754


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4845  WRLPDP  4828
             WRLP P
Sbjct  35    WRLPGP  40


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6327  MILPAI  6344
             M LPAI
Sbjct  12    MMLPAI  17


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 5/16 (31%)
 Frame = +2

Query  4121  DN-----GSNFTGATV  4153
             DN     G +FTG TV
Sbjct  286   DNVQLITGVDFTGTTV  301


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1415  CLMAGS  1398
             C MAGS
Sbjct  362   CIMAGS  367


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 10/26 (38%), Positives = 11/26 (42%), Gaps = 10/26 (38%)
 Frame = +2

Query  2855  VNDIQKLVGKLN----------WASQ  2902
             VN + KL  KLN          W SQ
Sbjct  230   VNHVDKLYQKLNFRVVLVGLEIWNSQ  255


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5806  MGVEMGH  5826
             M  EMGH
Sbjct  332   MAHEMGH  338


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 12/30 (40%)
 Frame = -1

Query  9142  GSLVSQRA-----PR----LRSGLTRETQY  9080
             GSL   R      PR    L S   RET Y
Sbjct  175   GSLLGPRTAAVFRPRPGDSLPS---RETRY  201


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8252  RVIEVV  8269
             RV EVV
Sbjct  225   RVLEVV  230


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7439  SANCSA  7422
             S NCSA
Sbjct  610   SSNCSA  615


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 4/15 (26%)
 Frame = -2

Query  2853  VQL----SFSGSTIG  2821
             VQL     F G T+G
Sbjct  288   VQLITGVDFTGTTVG  302


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  3038  VLVLL  3024
             VLVLL
Sbjct  661   VLVLL  665


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 7/14 (50%)
 Frame = +2

Query  8918  SRGPRAASGVLQEL  8959
             SRGP       QEL
Sbjct  720   SRGP-------QEL  726


 Score = 16.3 bits (31),  Expect(2) = 17389
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  1095  PPIPVGEIYKR  1127
             PP PV  +Y R
Sbjct  759   PPFPV-PVYTR  768


 Score = 15.9 bits (30),  Expect(2) = 17389
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1191  RQGPKE  1208
             RQ PK+
Sbjct  768   RQAPKQ  773


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3995  LVAVHVASG  4021
             L  VH ASG
Sbjct  644   LTEVHAASG  652


 Score = 16.3 bits (31),  Expect(2) = 20722
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  7552  PQEL  7541
             PQEL
Sbjct  723   PQEL  726


 Score = 15.5 bits (29),  Expect(2) = 20722
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7664  PTPSR  7650
             P PSR
Sbjct  717   PAPSR  721


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3304  RVLASHL  3324
             R L SHL
Sbjct  44    RALPSHL  50


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7929  TSQPRG  7946
             T QPRG
Sbjct  96    TEQPRG  101


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = +2

Query  6605  DNAKTIIVQLNTSVE  6649
             DN     VQL T V+
Sbjct  286   DN-----VQLITGVD  295


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 6/21 (28%)
 Frame = +3

Query  2526  ISTMCFHRDG---KDHQQYSK  2579
             +S MC H  G    DH   SK
Sbjct  306   VSAMCSHSSGAVNQDH---SK  323


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7594  HSSGA  7580
             HSSGA
Sbjct  312   HSSGA  316


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4504  PEELCW  4487
             PE  CW
Sbjct  593   PEKVCW  598


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +1

Query  1642  RSG--LPTRE  1665
             R G  LP RE
Sbjct  189   RPGDSLPSRE  198


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1774  SIGSCF  1757
             SIGS F
Sbjct  367   SIGSSF  372


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6506  QCTHG  6520
             QC HG
Sbjct  447   QCAHG  451


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8699  ALCVVD  8682
             A C+VD
Sbjct  564   AICIVD  569


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6880  NCNAQ  6894
             NC AQ
Sbjct  612   NCSAQ  616


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1893  TVSSAP  1876
             TVSS P
Sbjct  755   TVSSPP  760


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/14 (42%), Positives = 7/14 (50%), Gaps = 0/14 (0%)
 Frame = -2

Query  2448  TEKYASPTSSTVTD  2407
             TE Y     S VT+
Sbjct  84    TETYTAANGSEVTE  97


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  4897  SASSGSTC  4874
             SA S STC
Sbjct  117   SAASLSTC  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/16 (37%), Positives = 7/16 (43%), Gaps = 8/16 (50%)
 Frame = -3

Query  5969  YVPLY--------HML  5946
             YV LY        +ML
Sbjct  201   YVELYVVVDNAEFQML  216


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6141  GVNFT  6127
             GV+FT
Sbjct  293   GVDFT  297


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  8438  CSHPICC  8418
             C H  CC
Sbjct  448   CAHGTCC  454


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  7281  EWCREKKE  7304
             E CR KK+
Sbjct  464   ELCRPKKD  471


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1534  CPSLPQ  1517
             CP L Q
Sbjct  508   CPTLAQ  513


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = +3

Query  7896  GR--DIHHYR  7919
             GR  D H YR
Sbjct  600   GRCQDLHVYR  609


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  8455  SR--SRDAAP  8432
             SR  SR+ AP
Sbjct  683   SRILSRNVAP  692


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  5995  THRPQPTR---SSI  6027
             TH  QP R   SS+
Sbjct  730   THPGQPARHPASSV  743


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  4781  NNNILGSAY  4807
             N + LGS Y
Sbjct  75    NRDLLGSGY  83


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  3744  LSTC  3733
             LSTC
Sbjct  121   LSTC  124


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5404  PWKHPG  5421
             PW  PG
Sbjct  34    PWRLPG  39


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4836  PDPNASL  4816
             PD  ASL
Sbjct  115   PDSAASL  121


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5551  ELFVAV  5534
             EL+V V
Sbjct  203   ELYVVV  208


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8391  RERMRR  8408
             R+R RR
Sbjct  277   RQRTRR  282


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  226  ALSTQD  243
            AL T+D
Sbjct  573  ALTTED  578


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2812  DSTAY  2826
             D TAY
Sbjct  578   DGTAY  582


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6011  PQEVV  6025
             PQE V
Sbjct  723   PQELV  727


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4697  SPSFP  4683
             SP FP
Sbjct  758   SPPFP  762


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  5147  VAPSVAL  5127
             V P VAL
Sbjct  802   VGPKVAL  808


>pdb|3HRZ|D  Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor 
B
 pdb|3HS0|D  Chain D, Cobra Venom Factor (Cvf) In Complex With Human Factor 
B
 pdb|3HS0|I  Chain I, Cobra Venom Factor (Cvf) In Complex With Human Factor 
B
Length=741


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  3512  TNQKTELQAIY  3544
             TN K  LQA+Y
Sbjct  328   TNTKKALQAVY  338


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2780  KGMEVLSDVF  2751
             K ME L DVF
Sbjct  431   KDMENLEDVF  440


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  8279  CRAIRHIPR  8305
             CRAI H PR
Sbjct  73    CRAI-HCPR  80


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7656  WSGTE  7670
             WSGTE
Sbjct  186   WSGTE  190


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4806  YADPN  4792
             YADPN
Sbjct  664   YADPN  668


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3477  EEDKKL  3494
             EE+KKL
Sbjct  610   EEEKKL  615


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3832  PITVI  3818
             PITVI
Sbjct  373   PITVI  377


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3539  IYLALQDSG  3565
             IYL L  SG
Sbjct  246   IYLVLDGSG  254


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1640  EDLAFL  1657
             EDL FL
Sbjct  734   EDLGFL  739


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  1256  AS-FTGGKK  1279
             AS FTG KK
Sbjct  258   ASDFTGAKK  266


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4130  SNFTGA  4147
             S+FTGA
Sbjct  259   SDFTGA  264


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3711  TKELEEMN  3734
             TK+L E N
Sbjct  311   TKQLNEIN  318


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3819  ITVIGE  3836
             ITVI E
Sbjct  374   ITVIDE  379


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1092  NPPIPVG  1112
             NP IP+G
Sbjct  142   NPGIPIG  148


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1306  WTNKVSVI  1283
             W  K+SVI
Sbjct  470   WQAKISVI  477


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3862  WQVKI  3848
             WQ KI
Sbjct  470   WQAKI  474


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6342  IS*QVVTP  6365
             IS +VVTP
Sbjct  647   IS-EVVTP  653


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6691  PYPERTR  6711
             PYP  TR
Sbjct  43    PYPVQTR  49


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 7/13 (53%), Gaps = 3/13 (23%)
 Frame = +1

Query  1300  WSKMRTQ---IVR  1329
             WS + TQ    VR
Sbjct  57    WSTLKTQDQKTVR  69


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6170  LKNDTNT  6190
             LK  TNT
Sbjct  324   LKSGTNT  330


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6650  INCTRPNN  6673
             I C RP +
Sbjct  76    IHCPRPHD  83


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6493  CQHSTMY  6513
             CQ S MY
Sbjct  193   CQDSFMY  199


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7398  CLACT  7384
             CL CT
Sbjct  571   CLPCT  575


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6011  PQEV  6022
             PQEV
Sbjct  202   PQEV  205


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  110  GTHYLKHSRQA  78
            GT Y K+  QA
Sbjct  462  GTDYHKQPWQA  472


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2669  DLEI  2680
             DLEI
Sbjct  522   DLEI  525


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  6878  EIVTHSFNC-GG  6910
             E+VT  F C GG
Sbjct  649   EVVTPRFLCTGG  660


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5356  VTPILLC  5336
             VTP  LC
Sbjct  651   VTPRFLC  657


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4654  LFHVL  4640
             LF+VL
Sbjct  720   LFQVL  724


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5266  PSIPI  5252
             P IPI
Sbjct  143   PGIPI  147


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2464  LQEVY  2478
             LQ VY
Sbjct  334   LQAVY  338


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4648  HVLIL  4634
             HV IL
Sbjct  357   HVIIL  361


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2014  YSFMS  2000
             YS MS
Sbjct  338   YSMMS  342


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1195  KDQRNP  1212
             KD  NP
Sbjct  388   KDRKNP  393


>pdb|2WIN|I  Chain I, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|J  Chain J, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|K  Chain K, C3 Convertase (C3bbb) Stabilized By Scin
 pdb|2WIN|L  Chain L, C3 Convertase (C3bbb) Stabilized By Scin
Length=507


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  3512  TNQKTELQAIY  3544
             TN K  LQA+Y
Sbjct  94    TNTKKALQAVY  104


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  4130  SNFTGA  4147
             SNFTGA
Sbjct  25    SNFTGA  30


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  2780  KGMEVLSDVF  2751
             K ME L DVF
Sbjct  197   KDMENLEDVF  206


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4806  YADPN  4792
             YADPN
Sbjct  430   YADPN  434


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  3477  EEDKKL  3494
             EE+KKL
Sbjct  376   EEEKKL  381


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3832  PITVI  3818
             PITVI
Sbjct  139   PITVI  143


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1640  EDLAFL  1657
             EDL FL
Sbjct  500   EDLGFL  505


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +2

Query  1256  AS-FTGGKK  1279
             AS FTG KK
Sbjct  24    ASNFTGAKK  32


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  3711  TKELEEMN  3734
             TK+L E N
Sbjct  77    TKQLNEIN  84


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3819  ITVIGE  3836
             ITVI E
Sbjct  140   ITVIDE  145


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1306  WTNKVSVI  1283
             W  K+SVI
Sbjct  236   WQAKISVI  243


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3862  WQVKI  3848
             WQ KI
Sbjct  236   WQAKI  240


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +3

Query  6342  IS*QVVTP  6365
             IS +VVTP
Sbjct  413   IS-EVVTP  419


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6170  LKNDTNT  6190
             LK  TNT
Sbjct  90    LKSGTNT  96


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7398  CLACT  7384
             CL CT
Sbjct  337   CLPCT  341


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3539  IYLALQDS  3562
             IYL L  S
Sbjct  12    IYLVLDGS  19


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -3

Query  110  GTHYLKHSRQA  78
            GT Y K+  QA
Sbjct  228  GTDYHKQPWQA  238


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2669  DLEI  2680
             DLEI
Sbjct  288   DLEI  291


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  6878  EIVTHSFNC-GG  6910
             E+VT  F C GG
Sbjct  415   EVVTPRFLCTGG  426


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5356  VTPILLC  5336
             VTP  LC
Sbjct  417   VTPRFLC  423


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4654  LFHVL  4640
             LF+VL
Sbjct  486   LFQVL  490


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6995  EGSDTI  7012
             +GSD I
Sbjct  17    DGSDSI  22


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2464  LQEVY  2478
             LQ VY
Sbjct  100   LQAVY  104


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4648  HVLIL  4634
             HV IL
Sbjct  123   HVIIL  127


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2014  YSFMS  2000
             YS MS
Sbjct  104   YSMMS  108


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1195  KDQRNP  1212
             KD  NP
Sbjct  154   KDRKNP  159


>ref|XP_002343974.1|  PREDICTED: similar to C4A protein isoform 2 [Homo sapiens]
Length=1698

 GENE ID: 100294156 LOC100294156 | similar to complement component 4A (Rodgers
blood group) [Homo sapiens]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1671  LC--RSTRQR  1678


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2429
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2429
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2429
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2429
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1551  RQRRA  1555


 Score = 18.5 bits (36),  Expect(2) =  6346
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6346
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1507  SAT--LYDYYNP  1516


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4842  SIEW  4853
             SIEW
Sbjct  474   SIEW  477


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1587  RE------DSRAAF  1594


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1689  QEYG  1692


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8917  ITWPES  8934
             I WP+S
Sbjct  475   IEWPDS  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1522  VFYGAP  1527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1558  RGLQDEDG  1565


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1570  FACYYP  1575


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1618  MRNFLV  1623


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1532  LLATLC  1537


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1652  HPQYL  1656


>gb|ACJ37248.1|  anti-HIV-1 gp41 immunoglobulin heavy chain [Homo sapiens]
Length=140


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  4825  IWVRESP  4845
             IWVR+ P
Sbjct  35    IWVRQAP  41


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             LTSLRS
Sbjct  83    LTSLRS  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/19 (42%), Positives = 9/19 (47%), Gaps = 3/19 (15%)
 Frame = -1

Query  1393  TP*HAVIISSSVAAGPNAF  1337
             TP   VI+S     GP  F
Sbjct  122   TP---VIVSTASTKGPSVF  137


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -1

Query  2155  FWAIHSW  2135
             FW   SW
Sbjct  112   FWDFDSW  118


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 7/19 (36%)
 Frame = +1

Query  2812  DSTA--Y-----SAARKRQ  2847
             D TA  Y     S AR RQ
Sbjct  89    DDTAIYYCARVVSSARGRQ  107


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6413  IHYCA  6427
             I YCA
Sbjct  93    IYYCA  97


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6274  LTSYA  6260
             LT YA
Sbjct  57    LTNYA  61


>pdb|3DXA|D  Chain D, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 
And Decamer Ebv Antigen
 pdb|3DXA|I  Chain I, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 
And Decamer Ebv Antigen
 pdb|3DXA|N  Chain N, Crystal Structure Of The Dm1 Tcr In Complex With Hla-B4405 
And Decamer Ebv Antigen
Length=199


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = +2

Query  6302  KLDIIPIDN-DTTSYKL  6349
             KL +IPI N D   Y L
Sbjct  103   KLQVIPIQNPDPAVYQL  119


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  3730  ISSNSFVCWY  3701
             IS N +V WY
Sbjct  26    ISGNEYVYWY  35


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  110   QNPDPAVYQ  118


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  172   WSNKS  176


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4591  SIIPND  4574
             SIIP D
Sbjct  187   SIIPED  192


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = +3

Query  3453  EKQDM--LLIEEDKK  3491
             E  +M  L I ED K
Sbjct  54    ETNEMASLIITEDRK  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2093  NLKCNQS  2073
             NL CN+S
Sbjct  18    NLPCNHS  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8633  GRANSLP  8653
             GRA  LP
Sbjct  14    GRAANLP  20


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7387  YRQRH  7373
             YRQ H
Sbjct  35    YRQIH  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  128   SVCLF  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6493  CQHST  6507
             C HST
Sbjct  21    CNHST  25


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  118   QLRDSKSSD  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  173   SNKSDFAC  180


>pdb|3DX9|A  Chain A, Crystal Structure Of The Dm1 Tcr At 2.75a
 pdb|3DX9|C  Chain C, Crystal Structure Of The Dm1 Tcr At 2.75a
Length=198


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 1/17 (5%)
 Frame = +2

Query  6302  KLDIIPIDN-DTTSYKL  6349
             KL +IPI N D   Y L
Sbjct  103   KLQVIPIQNPDPAVYQL  119


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  3730  ISSNSFVCWY  3701
             IS N +V WY
Sbjct  26    ISGNEYVYWY  35


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             QNPD  +YQ
Sbjct  110   QNPDPAVYQ  118


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7610  WSNKS  7624
             WSNKS
Sbjct  172   WSNKS  176


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4591  SIIPND  4574
             SIIP D
Sbjct  187   SIIPED  192


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 2/15 (13%)
 Frame = +3

Query  3453  EKQDM--LLIEEDKK  3491
             E  +M  L I ED K
Sbjct  54    ETNEMASLIITEDRK  68


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2093  NLKCNQS  2073
             NL CN+S
Sbjct  18    NLPCNHS  24


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  8633  GRANSLP  8653
             GRA  LP
Sbjct  14    GRAANLP  20


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7387  YRQRH  7373
             YRQ H
Sbjct  35    YRQIH  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8054  SLCLF  8068
             S CLF
Sbjct  128   SVCLF  132


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6493  CQHST  6507
             C HST
Sbjct  21    CNHST  25


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1014  QMREPRGSD  1040
             Q+R+   SD
Sbjct  118   QLRDSKSSD  126


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 4/8 (50%), Gaps = 0/8 (0%)
 Frame = -2

Query  1872  SNRASFSC  1849
             SN   F C
Sbjct  173   SNKSDFAC  180


>gb|AAI71786.1|  Complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|NP_001138751.1|  mu-type opioid receptor isoform MOR-1H [Homo sapiens]
Length=493

 GENE ID: 4988 OPRM1 | opioid receptor, mu 1 [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1514  QLWQRR  1531
             +LWQRR
Sbjct  59    ELWQRR  64


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/19 (47%), Positives = 9/19 (47%), Gaps = 4/19 (21%)
 Frame = -1

Query  4171  PPTGGPNRSTGEIAAIVSM  4115
             PPTG P      I AI  M
Sbjct  153   PPTGSPSM----ITAITIM  167


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7308  TALFSLCT  7285
             T  F LCT
Sbjct  248   TSIFTLCT  255


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/26 (30%), Positives = 11/26 (42%), Gaps = 12/26 (46%)
 Frame = -2

Query  426  IYIFSFPLALTEFFPIDLILPRLILT  349
            ++IF F            I+P LI T
Sbjct  331  VFIFAF------------IMPVLIIT  344


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 16/43 (37%), Positives = 17/43 (39%), Gaps = 22/43 (51%)
 Frame = -1

Query  289  QSPPLASCRARFSKPS-PASRELLWFPFRFQVPVR---APLLE  173
            Q PPL      F  PS PAS E            R   APLL+
Sbjct  20   QNPPL------FPPPSLPAS-E-----------SRMAHAPLLQ  44


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4737  FLDEGF  4720
             FLDE F
Sbjct  433   FLDENF  438


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2703  SIFVLC  2686
             SIF LC
Sbjct  249   SIFTLC  254


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  7462  MLLRLNS  7442
             M LRL S
Sbjct  350   MILRLKS  356


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  1811  LWQR  1822
             LWQR
Sbjct  60    LWQR  63


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2161  TMAIDR  2178
             TM +DR
Sbjct  255   TMSVDR  260


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4562  RKAKII  4579
             R AKII
Sbjct  277   RNAKII  282


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2075  IGCTLNF  2095
             I CTL F
Sbjct  310   IDCTLTF  316


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/28 (39%), Positives = 11/28 (39%), Gaps = 13/28 (46%)
 Frame = -2

Query  4599  IC-FP*SLMIFAFLLGTTFMSLLSCITT  4519
             IC F     IFAF      M  L  I T
Sbjct  329   ICVF-----IFAFI-----MPVL--IIT  344


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  534  MV-VAVPVFV  508
            MV V V VF+
Sbjct  376  MVLVVVAVFI  385


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6518  GIRPVVST  6541
             G RP VST
Sbjct  86    GARPAVST  93


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -1

Query  5566  SDCSDELFVAVSA-SSC  5519
             S+C D L     A SSC
Sbjct  104   SNCTDAL-----AYSSC  115


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8320  ALSYSS  8303
             AL YSS
Sbjct  109   ALAYSS  114


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2911  WVNL  2900
             WVNL
Sbjct  124   WVNL  127


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -3

Query  7715  ILQLRSV--LS  7689
             IL L SV  LS
Sbjct  351   ILRLKSVRMLS  361


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = -1

Query  3733  FISSNSFVCWYP  3698
             FI     VCW P
Sbjct  384   FI-----VCWTP  390


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5171  KALVSI  5154
             KALV I
Sbjct  398   KALVTI  403


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5818  SPPPSP  5801
             SP PSP
Sbjct  116   SPAPSP  121


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/20 (40%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = -3

Query  8768  APSKGQWI---------SDP  8736
             APS G W+         SDP
Sbjct  118   APSPGSWVNLSHLDGNLSDP  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -3

Query  218  VSLS-----LSGPC  192
            V LS     LS PC
Sbjct  125  VNLSHLDGNLSDPC  138


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8218  IEQANS  8201
             IEQ NS
Sbjct  453   IEQQNS  458


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  133  LPESHNRRAH  104
            LP S  R AH
Sbjct  30   LPASESRMAH  39


 Score = 16.8 bits (32),  Expect(2) = 25613
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4440  IFGFI  4454
             IF FI
Sbjct  333   IFAFI  337


 Score = 15.1 bits (28),  Expect(2) = 25613
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  4563  EKQRSL  4580
             EK R L
Sbjct  365   EKDRNL  370


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4365  PALYPP  4348
             P L+PP
Sbjct  22    PPLFPP  27


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8595  VDLSH  8609
             V+LSH
Sbjct  125   VNLSH  129


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  488  RNIRR  502
            RN RR
Sbjct  368  RNLRR  372


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 4/13 (30%)
 Frame = -2

Query  4371  LSPALYPPIPPFL  4333
             L P LY     FL
Sbjct  426   LNPVLY----AFL  434


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8947  YSGCS  8933
             YS CS
Sbjct  112   YSSCS  116


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  3745  FIYLFI  3728
             FI+ FI
Sbjct  332   FIFAFI  337


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3604  RNHSST  3621
             R+H ST
Sbjct  466   RDHPST  471


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2418  TVTDFFFFN  2392
             T T+ + FN
Sbjct  196   TATNIYIFN  204


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2199  TNAFIF  2182
             TN +IF
Sbjct  198   TNIYIF  203


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  715  RSAKI  729
            R AKI
Sbjct  277  RNAKI  281


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6910  PSTIKTV  6890
             PST  TV
Sbjct  469   PSTANTV  475


>ref|NP_001129202.1|  target of Myb protein 1 isoform 4 [Homo sapiens]
Length=447

 GENE ID: 10043 TOM1 | target of myb1 (chicken) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  5162  LELLEEL  5182
             LELL+EL
Sbjct  206   LELLQEL  212


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 5/24 (20%)
 Frame = +3

Query  1716  ESFRSGVETTTPPQKQEP----ID  1775
             E FR G +TT  P   EP    ID
Sbjct  257   ERFRTG-QTTKAPSEAEPAADLID  279


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8409  AEPAAD  8426
             AEPAAD
Sbjct  271   AEPAAD  276


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -1

Query  1834  CD------EGSLPKSDLREVK  1790
             CD      EG  PK  LR VK
Sbjct  37    CDIINETEEG--PKDALRAVK  55


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -2

Query  7881  IEST-AKTILKPTKPPTII  7828
             +ES    TIL    PPTI+
Sbjct  95    VESVLVRTILPKNNPPTIV  113


 Score = 19.7 bits (39),  Expect(2) =  3654
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -3

Query  5939  LMHKIEWWLLPSTQV  5895
             LM  IE WL  ST V
Sbjct  371   LMEDIEQWL--STDV  383


 Score = 16.3 bits (31),  Expect(2) =  3654
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  5827  GAPSPP--PSP  5801
             G P PP  P P
Sbjct  422   GPPGPPSGPAP  432


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2156  LLGHPF  2139
             LLG PF
Sbjct  4     LLGNPF  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  16   TRSEPGSSLAN  48
            TR   GSSLA+
Sbjct  327  TR---GSSLAD  334


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +2

Query  9101  TRSEPGSSLAN  9133
             TR   GSSLA+
Sbjct  327   TR---GSSLAD  334


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  8637  LPVPPFLLKSG  8605
             LP PP L  SG
Sbjct  153   LPAPPIL--SG  161


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4777  NLASPS  4760
             NL SPS
Sbjct  414   NLSSPS  419


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1773  LSAPASEG  1750
             LS P  EG
Sbjct  415   LSSPSAEG  422


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5775  LIATVF  5758
             LI TVF
Sbjct  120   LIQTVF  125


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2255  NPYNTPV  2275
             NP+  PV
Sbjct  7     NPFSSPV  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3756  ALTNLSTC  3733
             ALT L TC
Sbjct  70    ALTVLETC  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1089  NNPP  1100
             NNPP
Sbjct  107   NNPP  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1850  QLKEALL  1870
             QL E LL
Sbjct  234   QLTEELL  240


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  1284  MTETLLVQNAN  1316
             +TE LL+ N N
Sbjct  235   LTEELLIVNDN  245


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3532  TSNLSS  3549
             T NLSS
Sbjct  287   TGNLSS  292


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3122  DKFDM  3108
             D FDM
Sbjct  319   DEFDM  323


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  152   PLPAP  156


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1499  LSLVPKIA  1476
             L L+P IA
Sbjct  224   LELIPQIA  231


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7549  QELLI  7535
             +ELLI
Sbjct  237   EELLI  241


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6730  RKNRKYE  6750
             RK  KYE
Sbjct  336   RKEVKYE  342


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3246  ERLLNLNCP  3272
             +RL NL  P
Sbjct  410   DRLPNLSSP  418


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2365  NFPEVL  2348
             NF EV+
Sbjct  63    NFHEVM  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2049  MLTGVGPT  2026
             MLT   PT
Sbjct  192   MLTELVPT  199


>ref|NP_001129201.1|  target of Myb protein 1 isoform 3 [Homo sapiens]
Length=460

 GENE ID: 10043 TOM1 | target of myb1 (chicken) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  5162  LELLEEL  5182
             LELL+EL
Sbjct  218   LELLQEL  224


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 5/24 (20%)
 Frame = +3

Query  1716  ESFRSGVETTTPPQKQEP----ID  1775
             E FR G +TT  P   EP    ID
Sbjct  269   ERFRTG-QTTKAPSEAEPAADLID  291


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8409  AEPAAD  8426
             AEPAAD
Sbjct  283   AEPAAD  288


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -1

Query  1834  CD------EGSLPKSDLREVK  1790
             CD      EG  PK  LR VK
Sbjct  4     CDIINETEEG--PKDALRAVK  22


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -2

Query  7881  IEST-AKTILKPTKPPTII  7828
             +ES    TIL    PPTI+
Sbjct  62    VESVLVRTILPKNNPPTIV  80


 Score = 19.7 bits (39),  Expect(2) =  3631
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -3

Query  5939  LMHKIEWWLLPSTQV  5895
             LM  IE WL  ST V
Sbjct  383   LMEDIEQWL--STDV  395


 Score = 16.3 bits (31),  Expect(2) =  3631
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  5827  GAPSPP--PSP  5801
             G P PP  P P
Sbjct  435   GPPGPPSGPAP  445


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  16   TRSEPGSSLAN  48
            TR   GSSLA+
Sbjct  339  TR---GSSLAD  346


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +2

Query  9101  TRSEPGSSLAN  9133
             TR   GSSLA+
Sbjct  339   TR---GSSLAD  346


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  8637  LPVPPFLLKSG  8605
             LP PP L  SG
Sbjct  165   LPAPPIL--SG  173


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4777  NLASPS  4760
             NL SPS
Sbjct  427   NLSSPS  432


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1773  LSAPASEG  1750
             LS P  EG
Sbjct  428   LSSPSAEG  435


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3756  ALTNLSTC  3733
             ALT L TC
Sbjct  37    ALTVLETC  44


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1089  NNPP  1100
             NNPP
Sbjct  74    NNPP  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4191  LEFP  4202
             LEFP
Sbjct  116   LEFP  119


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1850  QLKEALL  1870
             QL E LL
Sbjct  246   QLTEELL  252


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  1284  MTETLLVQNAN  1316
             +TE LL+ N N
Sbjct  247   LTEELLIVNDN  257


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3532  TSNLSS  3549
             T NLSS
Sbjct  299   TGNLSS  304


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3122  DKFDM  3108
             D FDM
Sbjct  331   DEFDM  335


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  164   PLPAP  168


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1499  LSLVPKIA  1476
             L L+P IA
Sbjct  236   LELIPQIA  243


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7549  QELLI  7535
             +ELLI
Sbjct  249   EELLI  253


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6730  RKNRKYE  6750
             RK  KYE
Sbjct  348   RKEVKYE  354


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3246  ERLLNLNCP  3272
             +RL NL  P
Sbjct  423   DRLPNLSSP  431


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2365  NFPEVL  2348
             NF EV+
Sbjct  30    NFHEVM  35


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2049  MLTGVGPT  2026
             MLT   PT
Sbjct  204   MLTELVPT  211


>emb|CAR62954.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=109


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4914  YYFD  4925
             YYFD
Sbjct  104   YYFD  107


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4564  SSWHYF  4547
             S W YF
Sbjct  101   SGWYYF  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3759  ESGKYYF  3779
             +SG YYF
Sbjct  100   QSGWYYF  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>emb|CAR62953.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=113


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/9 (88%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = +2

Query  905  SGGTSSSHA  931
            SGGT SSHA
Sbjct  25   SGGTYSSHA  33


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  25  EPGSS  39
           EPGSS
Sbjct  13  EPGSS  17


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  9110  EPGSS  9124
             EPGSS
Sbjct  13    EPGSS  17


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  83    LSSLRS  88


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5264  KYPHKFH  5244
             KY +KF+
Sbjct  59    KYAQKFQ  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3047  YYDPS  3061
             YYD S
Sbjct  100   YYDSS  104


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +3

Query  7002  VTQSPSH  7022
             V Q P H
Sbjct  37    VXQAPGH  43


>emb|CAR62912.1|  immunoglobulin lambda chain variable region [Homo sapiens]
Length=67


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  496  DVSNRP  479
            DVSNRP
Sbjct  18   DVSNRP  23


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  1875  VSNRAS-----FS  1852
             VSNR S     FS
Sbjct  19    VSNRPSGVSKRFS  31


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 8/26 (30%)
 Frame = -1

Query  502  PSDVSNRPGLTANRS---SSLLAHTI  434
            PS VS R    A  S    SL   TI
Sbjct  23   PSGVSKR--FSASKSGNTASL---TI  43


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  42    TISGLQAED  50


>emb|CAR62909.1|  immunoglobulin lambda chain variable region [Homo sapiens]
Length=81


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  496  DVSNRP  479
            DVSNRP
Sbjct  32   DVSNRP  37


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  22    PGK---------APKLMIYDVSNRPSGVSNHFS  45


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3028  RTSTW  3042
             R STW
Sbjct  75    RSSTW  79


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  502  PSDVSN  485
            PS VSN
Sbjct  37   PSGVSN  42


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6094  NQFMGSK  6114
             N+F GSK
Sbjct  42    NHFSGSK  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  56    TISGLQAED  64


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  1352  SGYTR  1366
             S YTR
Sbjct  71    SSYTR  75


>emb|CAR62748.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=114


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7840  SYYHY  7826
             SYYHY
Sbjct  106   SYYHY  110


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  8309  IRQ----GLERI  8332
             IRQ    GLE I
Sbjct  37    IRQPPGEGLEWI  48


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8882  HFSLR  8868
             +FSLR
Sbjct  77    QFSLR  81


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4237  HRFYY  4223
             HR YY
Sbjct  104   HRSYY  108


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  9159  LRLKQW  9142
             L L QW
Sbjct  2     LQLQQW  7


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  74  LRLKQW  57
           L L QW
Sbjct  2   LQLQQW  7


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7466  LQLTVWG  7486
             LQL  WG
Sbjct  2     LQLQQWG  8


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  8174  YWS  8182
             YWS
Sbjct  33    YWS  35


>emb|CAR62721.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=121


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4534  ILYYY  4520
             ILYYY
Sbjct  110   ILYYY  114


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  6767  ISRAKWNNTL  6796
             ISR K  NTL
Sbjct  70    ISRDKSKNTL  79


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  818  LFYYFY  801
            L+YY+Y
Sbjct  111  LYYYYY  116


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -1

Query  3886  YYFFCYY  3866
             YY++ YY
Sbjct  112   YYYY-YY  117


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8332  FAIRWV  8349
             FA  WV
Sbjct  32    FAMHWV  37


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDKSKN  77


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  86    LRAE  89


>emb|CAR62605.1|  immunoglobulin lambda chain variable region [Homo sapiens]
Length=91


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  496  DVSNRP  479
            DVSNRP
Sbjct  38   DVSNRP  43


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/33 (36%), Positives = 12/33 (36%), Gaps = 20/33 (60%)
 Frame = -2

Query  1917  PGKLISSNTVSSAP------VSNRAS-----FS  1852
             PGK         AP      VSNR S     FS
Sbjct  28    PGK---------APKLMIYDVSNRPSGVSSRFS  51


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  502  PSDVSNR  482
            PS VS R
Sbjct  43   PSGVSSR  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8514  LEAQEEEE  8537
             L+A++E E
Sbjct  66    LQAEDEAE  73


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2829  TIGCT  2815
             TI CT
Sbjct  5     TISCT  9


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG   ED
Sbjct  62    TISGLQAED  70


>emb|CAR62550.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=117


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  5290  NSAT---TAVY  5313
             NSAT   TAVY
Sbjct  85    NSATAADTAVY  95


 Score = 21.8 bits (44),  Expect =   981
 Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 17/37 (45%)
 Frame = -1

Query  4276  ISYLSYN---FL*FFIHRFYY--SLT--LGI-VGNSK  4190
             I Y SY             YY  SLT  L I VG SK
Sbjct  50    IGYISYSGST---------YYNPSLTSRLTISVGSSK  77


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = -2

Query  5457  TIAIGTS----SFRLTS  5419
             TI +G S    S RL S
Sbjct  70    TISVGSSKNQFSLRLNS  86


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7395  LACTVS  7378
             L CTVS
Sbjct  20    LTCTVS  25


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3047  YYDPS  3061
             YY+PS
Sbjct  60    YYNPS  64


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7456  LRLNS  7442
             LRLNS
Sbjct  82    LRLNS  86


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI  GS KN
Sbjct  70    TISVGSSKN  78


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2844  SFSGST  2827
             S+SGST
Sbjct  54    SYSGST  59


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4727  SSKNKF  4744
             SSKN F
Sbjct  75    SSKNQF  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  8882  HFSLR  8868
             +FSLR
Sbjct  79    QFSLR  83


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1349  TSGYTR  1366
             TSGY R
Sbjct  107   TSGYYR  112


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  6745  ISYFSY  6728
             I Y SY
Sbjct  50    IGYISY  55


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  3586  RLTI  3597
             RLTI
Sbjct  68    RLTI  71


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2792  HNPSKGME  2769
             + P KG+E
Sbjct  41    QHPGKGLE  48


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4442  FRVYY  4456
             FR YY
Sbjct  101   FRNYY  105


>gb|AAI46850.1|  Complement component 4A (Rodgers blood group) [Homo sapiens]
 gb|AAI44547.1|  Complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>emb|CAQ10919.1|  complement component 4B (Childo blood group) [Homo sapiens]
Length=1744

 GENE ID: 721 C4B | complement component 4B (Chido blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6456  IIRRSME  6476
             +I RSM+
Sbjct  1123  VIHRSMQ  1129


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|XP_002343973.1|  PREDICTED: similar to C4A protein isoform 1 [Homo sapiens]
 emb|CAQ10915.1|  complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 100294156 LOC100294156 | similar to complement component 4A (Rodgers
blood group) [Homo sapiens]


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4842  SIEW  4853
             SIEW
Sbjct  474   SIEW  477


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8917  ITWPES  8934
             I WP+S
Sbjct  475   IEWPDS  480


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>emb|CAQ07657.1|  complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>pdb|2OTP|A  Chain A, Crystal Structure Of Immunoglobulin-Like Transcript 
1 (Ilt1LIR7LILRA2)
 pdb|2OTP|B  Chain B, Crystal Structure Of Immunoglobulin-Like Transcript 
1 (Ilt1LIR7LILRA2)
Length=196


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 3/19 (15%)
 Frame = +2

Query  2483  FTIPSINNETPGIRY--QY  2533
             F IPSI  E  G RY  QY
Sbjct  59    FPIPSITWEHAG-RYHCQY  76


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 2/21 (9%)
 Frame = -2

Query  3804  SWALSI--PSKNSTFLIPALT  3748
             SW   I  P KN  F IP  T
Sbjct  45    SWVRRIQEPGKNGQFPIPSIT  65


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 6/15 (40%)
 Frame = -1

Query  1969  SY----FDKTSNSPY  1937
             SY    +D  SNSPY
Sbjct  169   SYRCYAYD--SNSPY  181


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  4499  LWKGE-GAVVIQ  4531
             LW  E G V+IQ
Sbjct  8     LW-AEPGSVIIQ  18


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7356  LWAQP  7370
             LWA+P
Sbjct  8     LWAEP  12


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  9041  SPLPSP  9024
             S LPSP
Sbjct  103   SALPSP  108


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3294  VSHVSF  3277
             VS+V F
Sbjct  121   VSQVAF  126


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  2629  YVW  2621
             YVW
Sbjct  181   YVW  183


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  7397  VWPVPS  7380
             VW  PS
Sbjct  182   VWSLPS  187


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6557  GSLAEEE  6577
             GSL  EE
Sbjct  28    GSLQAEE  34


>gb|AAI51205.1|  Complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>gb|AAI46674.1|  C4A protein [Homo sapiens]
Length=1698

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1671  LC--RSTRQR  1678


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2429
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2429
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2429
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2429
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1551  RQRRA  1555


 Score = 18.5 bits (36),  Expect(2) =  6346
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6346
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1507  SAT--LYDYYNP  1516


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1587  RE------DSRAAF  1594


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1689  QEYG  1692


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1522  VFYGAP  1527


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1558  RGLQDEDG  1565


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1570  FACYYP  1575


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1618  MRNFLV  1623


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1532  LLATLC  1537


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1652  HPQYL  1656


>ref|NP_919270.2|  indoleamine 2,3-dioxygenase 2 [Homo sapiens]
Length=420

 GENE ID: 169355 IDO2 | indoleamine 2,3-dioxygenase 2 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2307  HLVLSF  2290
             HLVLSF
Sbjct  97    HLVLSF  102


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 10/21 (47%)
 Frame = -2

Query  8808  PLLSY----------LAQLVL  8776
             PLLS           LA+LVL
Sbjct  80    PLLSCQFLKGHREQRLAHLVL  100


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4545  MSLLSC  4528
             M LLSC
Sbjct  79    MPLLSC  84


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 5/13 (38%)
 Frame = +2

Query  2180  EK-----IKALVE  2203
             EK     IKALV+
Sbjct  188   EKEAVPGIKALVQ  200


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2549  GWKGSPA  2569
             GWK  PA
Sbjct  253   GWKDNPA  259


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  2411  LIFSFLTL  2388
             L+ SFLT+
Sbjct  98    LVLSFLTM  105


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +3

Query  4176  ESSRNLEFPTI  4208
             E SRNL  P I
Sbjct  130   EVSRNLGLPPI  140


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2591  KILEPFR  2611
             KI+EP R
Sbjct  12    KIMEPHR  18


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -2

Query  4182  LIPAHQ-QA  4159
             LI AHQ QA
Sbjct  66    LIDAHQLQA  74


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5491  ITKALG  5508
             ITK LG
Sbjct  227   ITKTLG  232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  9035  LPSPAQA  9015
             LP P QA
Sbjct  383   LPGPPQA  389


 Score = 16.3 bits (31),  Expect(2) = 32756
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  83   QALLRL  66
            QAL RL
Sbjct  215  QALQRL  220


 Score = 15.1 bits (28),  Expect(2) = 32756
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  102  LLEAL  88
            LL+AL
Sbjct  213  LLQAL  217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 15/36 (41%)
 Frame = +1

Query  4666  TICMFQGKLGD---GFIDIT----------MKALIQ  4734
             TI  F G  G+   GFI +T           KAL+Q
Sbjct  167   TIISFPG--GESLHGFILVTALVEKEAVPGIKALVQ  200


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  9168  QALLRL  9151
             QAL RL
Sbjct  215   QALQRL  220


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2774  FLWMGY  2791
             FL MGY
Sbjct  102   FLTMGY  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3914  GEAMHG  3931
             GE +HG
Sbjct  174   GESLHG  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5788  ISALVE  5805
             + ALVE
Sbjct  183   VTALVE  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  7628  PEIYY  7614
             P+I+Y
Sbjct  240   PDIFY  244


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8141  EALKY  8155
             E LKY
Sbjct  272   EPLKY  276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  985   QCMQGL  1002
             QC Q L
Sbjct  348   QCVQAL  353


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6800  QIASKL  6817
             +IA KL
Sbjct  58    EIANKL  63


>ref|NP_001153890.1|  Z-DNA-binding protein 1 isoform c [Homo sapiens]
Length=354

 GENE ID: 81030 ZBP1 | Z-DNA binding protein 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +2

Query  5105  MEQAPEDQGPQRE  5143
             M QAP D G  RE
Sbjct  1     MAQAPADPG--RE  11


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/25 (44%), Positives = 11/25 (44%), Gaps = 9/25 (36%)
 Frame = -1

Query  5842  HPKE---HGAPS------PPPSPQV  5795
             H  E   HG PS      PP SP V
Sbjct  193   HSNEMRLHGVPSEGPAHIPPGSPPV  217


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6687  ESVSRED  6707
             + VSRED
Sbjct  142   QTVSRED  148


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5752  RAEDSG  5769
             R EDSG
Sbjct  91    RPEDSG  96


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2294  DSTKWRKLVD  2323
             DS  W  LVD
Sbjct  163   DSSTWGTLVD  172


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 7/22 (31%)
 Frame = -1

Query  1405  PGPPTP*HAVIISSSVAAGPNA  1340
             PG P P   V   S  AAGP A
Sbjct  212   PGSP-P---V---SATAAGPEA  226


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7523  RYLKD  7537
             R+LKD
Sbjct  40    RFLKD  44


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6507  NVHME  6521
             ++HME
Sbjct  178   DIHME  182


 Score = 16.3 bits (31),  Expect(2) = 35160
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  5353  LLDRGEQ  5373
             LLD  EQ
Sbjct  77    LLDMDEQ  83


 Score = 15.1 bits (28),  Expect(2) = 35160
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5363  EESKKW  5380
             E+SK W
Sbjct  82    EQSKAW  87


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 2/9 (22%)
 Frame = -2

Query  3147  VFRFL--NG  3127
             ++RFL  NG
Sbjct  38    IYRFLKDNG  46


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6962  STWST  6976
             STW T
Sbjct  165   STWGT  169


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7386  YRPDN  7400
             YRP++
Sbjct  90    YRPED  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4607  HLPS  4596
             HLPS
Sbjct  155   HLPS  158


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/15 (46%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = +1

Query  1546  IAGPLGKRAVGNVER  1590
             IA  LG R   +V R
Sbjct  53    IAQALGMRTAKDVNR  67


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  284  AAPRLLP  264
            A PR LP
Sbjct  151  AGPRHLP  157


>ref|NP_001135751.1|  ribonuclease H2 subunit B isoform 2 [Homo sapiens]
Length=257

 GENE ID: 79621 RNASEH2B | ribonuclease H2, subunit B [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  4839  LPDPNASLFLLYADPN  4792
             LP+P ASL      PN
Sbjct  234   LPEPSASL------PN  243


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7426  LLLHY  7412
             LLLHY
Sbjct  96    LLLHY  100


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8065  LQLPPLERL  8091
             L LP LE L
Sbjct  129   LKLPGLEKL  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  2662  YIQIIHVLIDNYV  2624
             YI   H LI +Y+
Sbjct  208   YIRYAHGLISDYI  220


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6601  EIDRSNYY  6578
             EID   YY
Sbjct  149   EIDNKKYY  156


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  25   EPGSSLAN  48
            EP  SL N
Sbjct  236  EPSASLPN  243


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9110  EPGSSLAN  9133
             EP  SL N
Sbjct  236   EPSASLPN  243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3743  YLLVHFL  3723
             +LL H+L
Sbjct  95    FLLLHYL  101


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -1

Query  1303  TNKVSV---IQ---FF  1274
             TN V V   +Q   FF
Sbjct  180   TNNVNVSSRVQSTAFF  195


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  7289  QREKR  7303
             QR+KR
Sbjct  251   QRQKR  255


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8598  DLSHFLK  8618
             DLS +LK
Sbjct  227   DLSKYLK  233


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8831  LVTPC  8845
             LV PC
Sbjct  40    LVNPC  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8628  GLEGLIH  8648
             GLE L H
Sbjct  133   GLEKLLH  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  376  IDGKKF  393
            ID KK+
Sbjct  150  IDNKKY  155


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  5354  YSTEESKKW  5380
             YS E   KW
Sbjct  158   YSKEKTLKW  166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2072  ESTDFF  2055
             +ST FF
Sbjct  190   QSTAFF  195


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1678  FFRADQ  1695
             FF  DQ
Sbjct  194   FFSGDQ  199


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  1745  NSPSEAGADRQ  1777
             N PS   A RQ
Sbjct  243   NPPSKMAAQRQ  253


>gb|EAX03569.1|  hCG2001591 [Homo sapiens]
Length=1744


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6456  IIRRSME  6476
             +I RSM+
Sbjct  1123  VIHRSMQ  1129


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|NP_997325.2|  putative uncharacterized protein C14orf181 [Homo sapiens]
Length=166

 GENE ID: 400223 C14orf181 | chromosome 14 open reading frame 181 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  283  PPLASCRAR  257
            PPL  CR R
Sbjct  117  PPLGTCRPR  125


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  8071  LPPLERLTL  8097
             LPPL  LTL
Sbjct  153   LPPLGSLTL  161


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  417  FSFPLA  400
            F FPLA
Sbjct  15   FTFPLA  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8035  YLGR  8046
             YLGR
Sbjct  35    YLGR  38


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3273  MGSLNLG  3253
             +GSL LG
Sbjct  156   LGSLTLG  162


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  224  PLVSLSL  204
            PL SL L
Sbjct  155  PLGSLTL  161


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = +2

Query  6587  RSVNFTDNAKT  6619
             RS  FT   KT
Sbjct  6     RSASFT--PKT  14


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4817  RLAFGSGS  4840
             RL  GSGS
Sbjct  65    RLPVGSGS  72


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  8303  RRIRQGL  8323
             RR+ +GL
Sbjct  143   RRVSEGL  149


>ref|NP_667345.1|  transcriptional repressor NF-X1 isoform 3 [Homo sapiens]
Length=833

 GENE ID: 4799 NFX1 | nuclear transcription factor, X-box binding 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1534  CPSLPQL  1514
             CP LPQL
Sbjct  584   CPRLPQL  590


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  2374  NTTSRRVKKEK  2406
             N  SRRV  EK
Sbjct  304   NKSSRRVDQEK  314


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 18/42 (42%)
 Frame = +2

Query  1685  EQTRAN----SPTRRE----LQVWGRDNNSPSEA-----GAD  1771
             EQT       S TR E    L    R+  SPSE      GAD
Sbjct  126   EQTSDTAGLESSTRSESGTDL----REH-SPSESEKEVVGAD  162


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  8653  KEDKISLICG  8682
             KE K  LICG
Sbjct  707   KEHKCPLICG  716


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1536  CALLCH  1519
             C LLCH
Sbjct  457   CNLLCH  462


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +1

Query  190  EQGP-ESERET-----RGA  228
            E+ P ESE E      RGA
Sbjct  148  EHSPSESEKEVVGADPRGA  166


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  7189  SSSRSE---DL  7166
             SS RSE   DL
Sbjct  136   SSTRSESGTDL  146


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7076  APPISG  7093
             APP+SG
Sbjct  4     APPVSG  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  16   TRSEPGSSL  42
            TRSE G  L
Sbjct  138  TRSESGTDL  146


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  9101  TRSEPGSSL  9127
             TRSE G  L
Sbjct  138   TRSESGTDL  146


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2733  PHLNRCC  2713
             P+L RCC
Sbjct  588   PQLVRCC  594


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4356  YPPIP  4342
             YPP+P
Sbjct  756   YPPVP  760


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  5818  SPPP---SPQV  5795
             SPPP   S QV
Sbjct  50    SPPPCHLSRQV  60


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5117  PEDQGPQ  5137
             PED GP+
Sbjct  200   PEDAGPE  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/14 (35%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = -1

Query  3151  SCFQIF------KW  3128
             SC+++F      KW
Sbjct  376   SCYHVFHLNCIKKW  389


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6106  GSKPK  6120
             GSKPK
Sbjct  77    GSKPK  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5162  VSIHC  5148
             VS+HC
Sbjct  492   VSVHC  496


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4813  SPVCRPQ  4793
             S VC PQ
Sbjct  573   SQVCHPQ  579


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4460  PCNK  4449
             PCNK
Sbjct  91    PCNK  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1536  CALLCH  1519
             CA LCH
Sbjct  511   CAELCH  516


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7567  RATPNPQE  7544
             R TP P++
Sbjct  195   RTTPKPED  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4334  RKGGIGGYSA  4363
             RKG   GY A
Sbjct  224   RKGVLDGYGA  233


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4197  IPNSC  4183
             IP SC
Sbjct  436   IPHSC  440


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2356  LGSSIRNT  2379
             LGSS R T
Sbjct  607   LGSSSRKT  614


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3918  KPCMD  3932
             K CMD
Sbjct  613   KTCMD  617


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3659  IEQL  3670
             IEQL
Sbjct  348   IEQL  351


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7557  QIPRSC  7540
             +IP SC
Sbjct  435   EIPHSC  440


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3403  SRNLLC  3420
             SR+ LC
Sbjct  537   SRDVLC  542


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7635  ICSRDL  7618
             IC  DL
Sbjct  560   ICGKDL  565


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7510  PGCGKI  7527
             P CGK+
Sbjct  620   PSCGKV  625


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  8183  QELKNSAVSLLN  8218
             QE KNS    LN
Sbjct  23    QEKKNSG---LN  31


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4707  RHHYESPHP  4733
             R  Y SP P
Sbjct  45    RRNYSSPPP  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4939  ESEKQ  4925
             ESEK+
Sbjct  153   ESEKE  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  6678  QEKESVSRED  6707
             QEK  V R+D
Sbjct  312   QEKCTVRRQD  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  645  SCLK  634
            SCLK
Sbjct  556  SCLK  559


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6155  LKCTDLKND  6181
             L CT LK +
Sbjct  670   LPCTSLKSE  678


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 3/10 (30%)
 Frame = +2

Query  8375  WMAYCKGKNE  8404
             W   C GK E
Sbjct  802   W---CMGKHE  808


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  5858  HYRSST  5841
             HY  ST
Sbjct  811   HYWAST  816


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1540  PEIAGP  1557
             PE AGP
Sbjct  200   PEDAGP  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9128  PESSQA  9111
             P+SS+A
Sbjct  216   PDSSEA  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  43   PESSQA  26
            P+SS+A
Sbjct  216  PDSSEA  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -3

Query  6179  HSSNQC--TLN  6153
             H SN C   LN
Sbjct  495   HCSNPCENILN  505


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6045  ILTCG  6059
             IL CG
Sbjct  503   ILNCG  507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  188  GATARD  171
            G T RD
Sbjct  534  GSTSRD  539


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4403  TKEL  4414
             TKEL
Sbjct  667   TKEL  670


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8595  QLPCKS  8578
             +LPC S
Sbjct  669   ELPCTS  674


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5278  FHSCPS  5261
             +HSC S
Sbjct  783   YHSCHS  788


>ref|NP_001221.2|  caspase-10 isoform a preproprotein [Homo sapiens]
Length=479

 GENE ID: 843 CASP10 | caspase 10, apoptosis-related cysteine peptidase
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 9/18 (50%)
 Frame = +2

Query  2210  TEM---------EKEGKI  2236
             TEM         EK+GKI
Sbjct  145   TEMTSLSFLAFLEKQGKI  162


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  3725  LQFLCV-LVP  3699
             L FLC+ LVP
Sbjct  39    LKFLCIGLVP  48


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +2

Query  2378  PHPA-GLKKKKSVTVLDVGDAYFSVPLD  2458
             P+PA  L KK     L V    F VPLD
Sbjct  458   PQPAFTLRKK-----L-V----FPVPLD  475


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3629  QSESELVNQ  3655
             Q E ELV Q
Sbjct  209   QGEEELVSQ  217


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  6226  RDKKLLFQYQH  6258
             R KKLL   QH
Sbjct  87    RQKKLL---QH  94


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6083  HEDIIS  6100
             HEDI S
Sbjct  430   HEDILS  435


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1570  PFFLGAL  1550
             PFFL  L
Sbjct  76    PFFLAEL  82


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 6/22 (27%)
 Frame = -3

Query  2390  LRDVVFLI--ELPR----SLEF  2343
             L D +FL    LP     SL F
Sbjct  131   LKDMIFLLKDSLPKTEMTSLSF  152


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = +3

Query  6339  AIS*QVVTPQSLHRPV  6386
             AI  Q+VTP     PV
Sbjct  193   AI--QIVTP-----PV  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2771  EVLSDVF  2751
             E+LS VF
Sbjct  265   EILSHVF  271


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5537  SDEELI  5554
             SDE LI
Sbjct  324   SDEALI  329


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7433  LLRAIE  7450
             LLR IE
Sbjct  181   LLRNIE  186


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -3

Query  2384  DV-VFLIELPR  2355
             DV  FL  LPR
Sbjct  219   DVKTFLEALPR  229


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2555  SIPVEA  2538
             SIP EA
Sbjct  386   SIPAEA  391


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  754  GKWYI  768
            G WYI
Sbjct  412  GSWYI  416


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6872  DPEIVTHSF  6898
             D EI  H F
Sbjct  263   DAEILSHVF  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = +1

Query  187  PEQGPESERETRGALSTQDS  246
            PEQ P S       L  QDS
Sbjct  376  PEQAPTS-------L--QDS  386


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4670  YVCFR  4684
             YV FR
Sbjct  403   YVSFR  407


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7520  PQPGF  7506
             PQP F
Sbjct  458   PQPAF  462


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3196  LFYII  3182
             L YII
Sbjct  82    LLYII  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5704  ILRQRK  5721
             I RQ K
Sbjct  85    IIRQKK  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8642  NSLPK  8656
             +SLPK
Sbjct  140   DSLPK  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8796  KIEEAN  8813
             KI+E N
Sbjct  161   KIDEDN  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  8517  EA---QEEEE  8537
             EA   Q EEE
Sbjct  204   EAESYQGEEE  213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5670  CVVHSNH  5690
             CV+  NH
Sbjct  243   CVIVNNH  249


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6364  LSHYTGL  6384
             +SH+T L
Sbjct  335   MSHFTAL  341


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8833  KLVF  8822
             KLVF
Sbjct  467   KLVF  470


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  770  LMYHLPLDVL  741
            L +  PLD L
Sbjct  468  LVFPVPLDAL  477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2773  IPLDGL  2790
             +PLD L
Sbjct  472   VPLDAL  477


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4673  VCFRE  4687
             V FRE
Sbjct  18    VSFRE  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6569  EEEVV  6583
             EEE V
Sbjct  211   EEELV  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5856  VLQK  5867
             VLQK
Sbjct  292   VLQK  295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1615  LRDRLIF  1635
             LR  L+F
Sbjct  464   LRKKLVF  470


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4811  RKRLAF  4828
             RK L F
Sbjct  465   RKKLVF  470


>ref|NP_444254.3|  myosin light chain kinase, smooth muscle isoform 2 [Homo sapiens]
Length=1845

 GENE ID: 4638 MYLK | myosin light chain kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2571  IAGDPF  2554
             IAGDPF
Sbjct  675   IAGDPF  680


 Score = 18.9 bits (37),  Expect(2) =  1577
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6232  KKLLFQYQ  6255
             KKLL Q Q
Sbjct  1044  KKLLLQCQ  1051


 Score = 18.0 bits (35),  Expect(2) =  1577
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6155  LKCTDLKNDTN  6187
             LK  D KND N
Sbjct  998   LK-KDVKNDVN  1007


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7306  SGNRSFV  7326
             S NRSFV
Sbjct  255   SANRSFV  261


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8511  WLEAQEEEEV  8540
             WLE ++ E+V
Sbjct  791   WLEEEDGEDV  800


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  9031  PVPPRP-----RLPG  9002
             P PPRP     R PG
Sbjct  374   PAPPRPATFPTRQPG  388


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4753  CTSELI  4736
             CT ELI
Sbjct  1824  CTAELI  1829


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  6891  TV-LIVEGNF  6917
             TV L VEG F
Sbjct  118   TVELTVEGSF  127


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  7629  NRFGITRPGW  7658
             +R+G  RPGW
Sbjct  775   DRYGSLRPGW  784


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5213  IWLH  5224
             IWLH
Sbjct  586   IWLH  589


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1293  TLLVQN  1310
             TLLV+N
Sbjct  1240  TLLVEN  1245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
 Frame = +1

Query  952   MRKLQNGIECIQCMQGLLH  1008
             MR    G+E I+  QG  H
Sbjct  1497  MRQISEGVEYIH-KQGIVH  1514


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7041  IICFIL  7024
             +IC+IL
Sbjct  1580  VICYIL  1585


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  976   ECIQCMQ  996
             +C QC+Q
Sbjct  1640  DCTQCLQ  1646


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8600  IYSCLV  8583
             +Y CLV
Sbjct  230   VYTCLV  235


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1263  SQEVK  1277
             SQEVK
Sbjct  422   SQEVK  426


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4863  SFSSIL  4846
             SFSS+L
Sbjct  446   SFSSVL  451


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  3899  KCQLKGEAMHGQVDCS  3946
             KC  K +A  GQ +CS
Sbjct  1100  KCVAKNDA--GQAECS  1113


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +1

Query  712   IRSAKITL*CRTSRGKWY  765
             IRS   TL    S   WY
Sbjct  1274  IRSSSLTL----S---WY  1284


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1468  IIMVAEFV  1445
             I+MV E V
Sbjct  1465  IVMVLEIV  1472


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  4984  HLGL----TMCPNK  4955
             HL L     MC NK
Sbjct  1514  HLDLKPENIMCVNK  1527


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 8/30 (26%)
 Frame = +3

Query  8562  VPLRPMTYKAAVDLSHFLKEKGGLEGL-IH  8648
             VPL P    A V  S    EK G++ L IH
Sbjct  199   VPLQP---SARVSVS----EKNGMQVLEIH  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  7666  VPLHP-GRV  7643
             VPL+P  RV
Sbjct  199   VPLQPSARV  207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  7563  QPQIPR-----SC  7540
             QPQ PR     SC
Sbjct  313   QPQPPRESKLESC  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4034  EVIPAETG  4057
             EV P +TG
Sbjct  615   EVFPEDTG  622


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2321  DFREL  2335
             DFR+L
Sbjct  827   DFRDL  831


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4987  NIKQDI  5004
             NI Q+I
Sbjct  1436  NIRQEI  1441


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5757  RRQWQ  5771
             RR WQ
Sbjct  1673  RRKWQ  1677


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -1

Query  5575  LDESDCSDELFV  5540
             L E  C  EL V
Sbjct  1819  LGEATCTAELIV  1830


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7282  SGAERK  7299
             SG ERK
Sbjct  367   SGEERK  372


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3929  GQVDCS  3946
             GQV CS
Sbjct  521   GQVSCS  526


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4164  QAALTV  4147
             QA LTV
Sbjct  638   QAVLTV  643


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  7444  SPQQI----VL  7424
             SPQQ+    VL
Sbjct  878   SPQQVDFRSVL  888


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2469  LKSSSK  2452
             LKS SK
Sbjct  990   LKSASK  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6771  LMLQC  6757
             L+LQC
Sbjct  1046  LLLQC  1050


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7005  SLPSVL  6988
             SLP VL
Sbjct  1140  SLPPVL  1145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  1232  RQEHC  1236


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3962  LDCTH  3976
             LDCT+
Sbjct  1639  LDCTQ  1643


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 4/16 (25%)
 Frame = -1

Query  6616  FSIV----REIDRSNY  6581
             FS V     E DR  Y
Sbjct  89    FSLVIHAVHEEDRGKY  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2777  GMEVL  2763
             GM+VL
Sbjct  214   GMQVL  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2460  KTSGSI  2477
             KTS SI
Sbjct  340   KTSSSI  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6888  VTISGSPP  6865
             V +SG PP
Sbjct  575   VQVSGNPP  582


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1300  WSKMRTQI  1323
             W K R QI
Sbjct  1202  WMKFRKQI  1209


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1408  IRQE  1419
             IRQE
Sbjct  1437  IRQE  1440


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  618   KDTK--EA  635
             KDTK  EA
Sbjct  1652  KDTKNMEA  1659


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3480  EDKKLS  3497
             E KKLS
Sbjct  1658  EAKKLS  1663


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +2

Query  8231  AVAEG----------TDRVIEVVQG  8275
             AVAE           T R  EVV+G
Sbjct  1730  AVAEEKPHVKPYFSKTIRDLEVVEG  1754


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  807   VVEEKAFSPEVIPMFS  854
             V EEK   P V P FS
Sbjct  1731  VAEEK---PHVKPYFS  1743


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8887  SNTSLS  8870
             S TSLS
Sbjct  13    SKTSLS  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4189  FLLD  4178
             FLLD
Sbjct  79    FLLD  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7342  SQEPKE  7325
             SQE KE
Sbjct  422   SQEVKE  427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7917  DNGEYPCL  7894
             D G Y CL
Sbjct  508   DHGTYTCL  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4490  LVLSKV  4473
             LVL KV
Sbjct  710   LVLKKV  715


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +1

Query  3598  CIRNHSSTT----RS  3630
             C R H  TT    RS
Sbjct  1008  CKRGHAGTTDNEKRS  1022


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3857  LPPVVAKE  3880
             LPPV   E
Sbjct  1141  LPPVLGTE  1148


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  277   LASCR  263
             LA CR
Sbjct  1312  LATCR  1316


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7908  HHYRFR  7925
             H Y FR
Sbjct  1329  HEYKFR  1334


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7633  LFQRFI  7616
             LF+R I
Sbjct  1477  LFERII  1482


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             PQP R S
Sbjct  314   PQPPRES  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RI WL
Sbjct  475   RITWL  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8714  AELH  8725
             AELH
Sbjct  497   AELH  500


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7091  GQIRCSSNIT  7120
             GQ+ CS  +T
Sbjct  521   GQVSCSAWVT  530


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6651  LIVQDP  6668
             L VQ+P
Sbjct  641   LTVQEP  646


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6767  CYNVLV  6750
             CY  LV
Sbjct  1238  CYTLLV  1243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  5184  RMKLLDIFLGFG  5219
             R KL D    FG
Sbjct  1531  RIKLID----FG  1538


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  5510  SP-MAGRSGDSDEE  5548
             SP M    GD D E
Sbjct  1590  SPFM----GDNDNE  1599


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3861  GRLKSLA  3841
             GRL S+A
Sbjct  1687  GRLSSMA  1693


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6234  KTALSI  6251
             KT LS+
Sbjct  14    KTSLSV  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3863  PVVAK  3877
             PVV K
Sbjct  134   PVVSK  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3396  MGSFS  3382
             MG FS
Sbjct  177   MGRFS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8775  LVPVEPDK  8798
             L PV P K
Sbjct  543   LLPVAPSK  550


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2308  PFSTV  2294
             PF TV
Sbjct  679   PFPTV  683


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7854  KPTKPPTII  7828
             K   PP II
Sbjct  1164  KAAMPPQII  1172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6280  ERICI  6294
             ER CI
Sbjct  1490  ERECI  1494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1797  SLRSLFG  1817
             SL  LFG
Sbjct  1548  SLKVLFG  1554


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  642   CLKLPW  625
             CL  PW
Sbjct  1644  CLQHPW  1649


>ref|NP_444256.3|  myosin light chain kinase, smooth muscle isoform 3B [Homo sapiens]
Length=1794

 GENE ID: 4638 MYLK | myosin light chain kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2571  IAGDPF  2554
             IAGDPF
Sbjct  675   IAGDPF  680


 Score = 18.9 bits (37),  Expect(2) =  1594
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6232  KKLLFQYQ  6255
             KKLL Q Q
Sbjct  1044  KKLLLQCQ  1051


 Score = 18.0 bits (35),  Expect(2) =  1594
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6155  LKCTDLKNDTN  6187
             LK  D KND N
Sbjct  998   LK-KDVKNDVN  1007


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7306  SGNRSFV  7326
             S NRSFV
Sbjct  255   SANRSFV  261


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8511  WLEAQEEEEV  8540
             WLE ++ E+V
Sbjct  791   WLEEEDGEDV  800


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  9031  PVPPRP-----RLPG  9002
             P PPRP     R PG
Sbjct  374   PAPPRPATFPTRQPG  388


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4753  CTSELI  4736
             CT ELI
Sbjct  1773  CTAELI  1778


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  6891  TV-LIVEGNF  6917
             TV L VEG F
Sbjct  118   TVELTVEGSF  127


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  7629  NRFGITRPGW  7658
             +R+G  RPGW
Sbjct  775   DRYGSLRPGW  784


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5213  IWLH  5224
             IWLH
Sbjct  586   IWLH  589


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1293  TLLVQN  1310
             TLLV+N
Sbjct  1240  TLLVEN  1245


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
 Frame = +1

Query  952   MRKLQNGIECIQCMQGLLH  1008
             MR    G+E I+  QG  H
Sbjct  1497  MRQISEGVEYIH-KQGIVH  1514


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7041  IICFIL  7024
             +IC+IL
Sbjct  1580  VICYIL  1585


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  976   ECIQCMQ  996
             +C QC+Q
Sbjct  1589  DCTQCLQ  1595


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8600  IYSCLV  8583
             +Y CLV
Sbjct  230   VYTCLV  235


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1263  SQEVK  1277
             SQEVK
Sbjct  422   SQEVK  426


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4863  SFSSIL  4846
             SFSS+L
Sbjct  446   SFSSVL  451


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  3899  KCQLKGEAMHGQVDCS  3946
             KC  K +A  GQ +CS
Sbjct  1100  KCVAKNDA--GQAECS  1113


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +1

Query  712   IRSAKITL*CRTSRGKWY  765
             IRS   TL    S   WY
Sbjct  1274  IRSSSLTL----S---WY  1284


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1468  IIMVAEFV  1445
             I+MV E V
Sbjct  1465  IVMVLEIV  1472


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  4984  HLGL----TMCPNK  4955
             HL L     MC NK
Sbjct  1514  HLDLKPENIMCVNK  1527


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 8/30 (26%)
 Frame = +3

Query  8562  VPLRPMTYKAAVDLSHFLKEKGGLEGL-IH  8648
             VPL P    A V  S    EK G++ L IH
Sbjct  199   VPLQP---SARVSVS----EKNGMQVLEIH  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  7666  VPLHP-GRV  7643
             VPL+P  RV
Sbjct  199   VPLQPSARV  207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  7563  QPQIPR-----SC  7540
             QPQ PR     SC
Sbjct  313   QPQPPRESKLESC  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4034  EVIPAETG  4057
             EV P +TG
Sbjct  615   EVFPEDTG  622


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2321  DFREL  2335
             DFR+L
Sbjct  827   DFRDL  831


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4987  NIKQDI  5004
             NI Q+I
Sbjct  1436  NIRQEI  1441


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5757  RRQWQ  5771
             RR WQ
Sbjct  1622  RRKWQ  1626


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -1

Query  5575  LDESDCSDELFV  5540
             L E  C  EL V
Sbjct  1768  LGEATCTAELIV  1779


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7282  SGAERK  7299
             SG ERK
Sbjct  367   SGEERK  372


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3929  GQVDCS  3946
             GQV CS
Sbjct  521   GQVSCS  526


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4164  QAALTV  4147
             QA LTV
Sbjct  638   QAVLTV  643


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  7444  SPQQI----VL  7424
             SPQQ+    VL
Sbjct  878   SPQQVDFRSVL  888


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2469  LKSSSK  2452
             LKS SK
Sbjct  990   LKSASK  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6771  LMLQC  6757
             L+LQC
Sbjct  1046  LLLQC  1050


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7005  SLPSVL  6988
             SLP VL
Sbjct  1140  SLPPVL  1145


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  1232  RQEHC  1236


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3962  LDCTH  3976
             LDCT+
Sbjct  1588  LDCTQ  1592


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 4/16 (25%)
 Frame = -1

Query  6616  FSIV----REIDRSNY  6581
             FS V     E DR  Y
Sbjct  89    FSLVIHAVHEEDRGKY  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2777  GMEVL  2763
             GM+VL
Sbjct  214   GMQVL  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2460  KTSGSI  2477
             KTS SI
Sbjct  340   KTSSSI  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6888  VTISGSPP  6865
             V +SG PP
Sbjct  575   VQVSGNPP  582


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1300  WSKMRTQI  1323
             W K R QI
Sbjct  1202  WMKFRKQI  1209


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1408  IRQE  1419
             IRQE
Sbjct  1437  IRQE  1440


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  618   KDTK--EA  635
             KDTK  EA
Sbjct  1601  KDTKNMEA  1608


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3480  EDKKLS  3497
             E KKLS
Sbjct  1607  EAKKLS  1612


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +2

Query  8231  AVAEG----------TDRVIEVVQG  8275
             AVAE           T R  EVV+G
Sbjct  1679  AVAEEKPHVKPYFSKTIRDLEVVEG  1703


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  807   VVEEKAFSPEVIPMFS  854
             V EEK   P V P FS
Sbjct  1680  VAEEK---PHVKPYFS  1692


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8887  SNTSLS  8870
             S TSLS
Sbjct  13    SKTSLS  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4189  FLLD  4178
             FLLD
Sbjct  79    FLLD  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7342  SQEPKE  7325
             SQE KE
Sbjct  422   SQEVKE  427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7917  DNGEYPCL  7894
             D G Y CL
Sbjct  508   DHGTYTCL  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4490  LVLSKV  4473
             LVL KV
Sbjct  710   LVLKKV  715


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +1

Query  3598  CIRNHSSTT----RS  3630
             C R H  TT    RS
Sbjct  1008  CKRGHAGTTDNEKRS  1022


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3857  LPPVVAKE  3880
             LPPV   E
Sbjct  1141  LPPVLGTE  1148


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  277   LASCR  263
             LA CR
Sbjct  1312  LATCR  1316


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7908  HHYRFR  7925
             H Y FR
Sbjct  1329  HEYKFR  1334


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7633  LFQRFI  7616
             LF+R I
Sbjct  1477  LFERII  1482


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             PQP R S
Sbjct  314   PQPPRES  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RI WL
Sbjct  475   RITWL  479


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8714  AELH  8725
             AELH
Sbjct  497   AELH  500


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7091  GQIRCSSNIT  7120
             GQ+ CS  +T
Sbjct  521   GQVSCSAWVT  530


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6651  LIVQDP  6668
             L VQ+P
Sbjct  641   LTVQEP  646


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6767  CYNVLV  6750
             CY  LV
Sbjct  1238  CYTLLV  1243


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  5184  RMKLLDIFLGFG  5219
             R KL D    FG
Sbjct  1531  RIKLID----FG  1538


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3861  GRLKSLA  3841
             GRL S+A
Sbjct  1636  GRLSSMA  1642


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6234  KTALSI  6251
             KT LS+
Sbjct  14    KTSLSV  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3863  PVVAK  3877
             PVV K
Sbjct  134   PVVSK  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3396  MGSFS  3382
             MG FS
Sbjct  177   MGRFS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8775  LVPVEPDK  8798
             L PV P K
Sbjct  543   LLPVAPSK  550


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2308  PFSTV  2294
             PF TV
Sbjct  679   PFPTV  683


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7854  KPTKPPTII  7828
             K   PP II
Sbjct  1164  KAAMPPQII  1172


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6280  ERICI  6294
             ER CI
Sbjct  1490  ERECI  1494


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1797  SLRSLFG  1817
             SL  LFG
Sbjct  1548  SLKVLFG  1554


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  642   CLKLPW  625
             CL  PW
Sbjct  1593  CLQHPW  1598


>ref|NP_444253.3|  myosin light chain kinase, smooth muscle isoform 1 [Homo sapiens]
Length=1914

 GENE ID: 4638 MYLK | myosin light chain kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2571  IAGDPF  2554
             IAGDPF
Sbjct  744   IAGDPF  749


 Score = 18.9 bits (37),  Expect(2) =  1556
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6232  KKLLFQYQ  6255
             KKLL Q Q
Sbjct  1113  KKLLLQCQ  1120


 Score = 18.0 bits (35),  Expect(2) =  1556
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6155  LKCTDLKNDTN  6187
             LK  D KND N
Sbjct  1067  LK-KDVKNDVN  1076


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7306  SGNRSFV  7326
             S NRSFV
Sbjct  255   SANRSFV  261


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8511  WLEAQEEEEV  8540
             WLE ++ E+V
Sbjct  860   WLEEEDGEDV  869


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  9031  PVPPRP-----RLPG  9002
             P PPRP     R PG
Sbjct  374   PAPPRPATFPTRQPG  388


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4753  CTSELI  4736
             CT ELI
Sbjct  1893  CTAELI  1898


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  6891  TV-LIVEGNF  6917
             TV L VEG F
Sbjct  118   TVELTVEGSF  127


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  7629  NRFGITRPGW  7658
             +R+G  RPGW
Sbjct  844   DRYGSLRPGW  853


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5213  IWLH  5224
             IWLH
Sbjct  655   IWLH  658


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1293  TLLVQN  1310
             TLLV+N
Sbjct  1309  TLLVEN  1314


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
 Frame = +1

Query  952   MRKLQNGIECIQCMQGLLH  1008
             MR    G+E I+  QG  H
Sbjct  1566  MRQISEGVEYIH-KQGIVH  1583


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7041  IICFIL  7024
             +IC+IL
Sbjct  1649  VICYIL  1654


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  976   ECIQCMQ  996
             +C QC+Q
Sbjct  1709  DCTQCLQ  1715


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8600  IYSCLV  8583
             +Y CLV
Sbjct  230   VYTCLV  235


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1263  SQEVK  1277
             SQEVK
Sbjct  422   SQEVK  426


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4863  SFSSIL  4846
             SFSS+L
Sbjct  515   SFSSVL  520


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  3899  KCQLKGEAMHGQVDCS  3946
             KC  K +A  GQ +CS
Sbjct  1169  KCVAKNDA--GQAECS  1182


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +1

Query  712   IRSAKITL*CRTSRGKWY  765
             IRS   TL    S   WY
Sbjct  1343  IRSSSLTL----S---WY  1353


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1468  IIMVAEFV  1445
             I+MV E V
Sbjct  1534  IVMVLEIV  1541


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  4984  HLGL----TMCPNK  4955
             HL L     MC NK
Sbjct  1583  HLDLKPENIMCVNK  1596


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 8/30 (26%)
 Frame = +3

Query  8562  VPLRPMTYKAAVDLSHFLKEKGGLEGL-IH  8648
             VPL P    A V  S    EK G++ L IH
Sbjct  199   VPLQP---SARVSVS----EKNGMQVLEIH  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  7666  VPLHP-GRV  7643
             VPL+P  RV
Sbjct  199   VPLQPSARV  207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  7563  QPQIPR-----SC  7540
             QPQ PR     SC
Sbjct  313   QPQPPRESKLESC  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4034  EVIPAETG  4057
             EV P +TG
Sbjct  684   EVFPEDTG  691


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2321  DFREL  2335
             DFR+L
Sbjct  896   DFRDL  900


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4987  NIKQDI  5004
             NI Q+I
Sbjct  1505  NIRQEI  1510


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5757  RRQWQ  5771
             RR WQ
Sbjct  1742  RRKWQ  1746


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -1

Query  5575  LDESDCSDELFV  5540
             L E  C  EL V
Sbjct  1888  LGEATCTAELIV  1899


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7282  SGAERK  7299
             SG ERK
Sbjct  367   SGEERK  372


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3929  GQVDCS  3946
             GQV CS
Sbjct  590   GQVSCS  595


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4164  QAALTV  4147
             QA LTV
Sbjct  707   QAVLTV  712


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  7444  SPQQI----VL  7424
             SPQQ+    VL
Sbjct  947   SPQQVDFRSVL  957


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2469  LKSSSK  2452
             LKS SK
Sbjct  1059  LKSASK  1064


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6771  LMLQC  6757
             L+LQC
Sbjct  1115  LLLQC  1119


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7005  SLPSVL  6988
             SLP VL
Sbjct  1209  SLPPVL  1214


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  1301  RQEHC  1305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3962  LDCTH  3976
             LDCT+
Sbjct  1708  LDCTQ  1712


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 4/16 (25%)
 Frame = -1

Query  6616  FSIV----REIDRSNY  6581
             FS V     E DR  Y
Sbjct  89    FSLVIHAVHEEDRGKY  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2777  GMEVL  2763
             GM+VL
Sbjct  214   GMQVL  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2460  KTSGSI  2477
             KTS SI
Sbjct  340   KTSSSI  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6888  VTISGSPP  6865
             V +SG PP
Sbjct  644   VQVSGNPP  651


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1300  WSKMRTQI  1323
             W K R QI
Sbjct  1271  WMKFRKQI  1278


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1408  IRQE  1419
             IRQE
Sbjct  1506  IRQE  1509


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  618   KDTK--EA  635
             KDTK  EA
Sbjct  1721  KDTKNMEA  1728


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3480  EDKKLS  3497
             E KKLS
Sbjct  1727  EAKKLS  1732


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +2

Query  8231  AVAEG----------TDRVIEVVQG  8275
             AVAE           T R  EVV+G
Sbjct  1799  AVAEEKPHVKPYFSKTIRDLEVVEG  1823


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  807   VVEEKAFSPEVIPMFS  854
             V EEK   P V P FS
Sbjct  1800  VAEEK---PHVKPYFS  1812


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8887  SNTSLS  8870
             S TSLS
Sbjct  13    SKTSLS  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4189  FLLD  4178
             FLLD
Sbjct  79    FLLD  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7342  SQEPKE  7325
             SQE KE
Sbjct  422   SQEVKE  427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6703  RTRES  6717
             RTR+S
Sbjct  478   RTRDS  482


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7917  DNGEYPCL  7894
             D G Y CL
Sbjct  577   DHGTYTCL  584


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4490  LVLSKV  4473
             LVL KV
Sbjct  779   LVLKKV  784


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +1

Query  3598  CIRNHSSTT----RS  3630
             C R H  TT    RS
Sbjct  1077  CKRGHAGTTDNEKRS  1091


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3857  LPPVVAKE  3880
             LPPV   E
Sbjct  1210  LPPVLGTE  1217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  277   LASCR  263
             LA CR
Sbjct  1381  LATCR  1385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7908  HHYRFR  7925
             H Y FR
Sbjct  1398  HEYKFR  1403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7633  LFQRFI  7616
             LF+R I
Sbjct  1546  LFERII  1551


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             PQP R S
Sbjct  314   PQPPRES  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RI WL
Sbjct  544   RITWL  548


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8714  AELH  8725
             AELH
Sbjct  566   AELH  569


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7091  GQIRCSSNIT  7120
             GQ+ CS  +T
Sbjct  590   GQVSCSAWVT  599


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6651  LIVQDP  6668
             L VQ+P
Sbjct  710   LTVQEP  715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6767  CYNVLV  6750
             CY  LV
Sbjct  1307  CYTLLV  1312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  5184  RMKLLDIFLGFG  5219
             R KL D    FG
Sbjct  1600  RIKLID----FG  1607


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = +2

Query  5510  SP-MAGRSGDSDEE  5548
             SP M    GD D E
Sbjct  1659  SPFM----GDNDNE  1668


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3861  GRLKSLA  3841
             GRL S+A
Sbjct  1756  GRLSSMA  1762


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6234  KTALSI  6251
             KT LS+
Sbjct  14    KTSLSV  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3863  PVVAK  3877
             PVV K
Sbjct  134   PVVSK  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3396  MGSFS  3382
             MG FS
Sbjct  177   MGRFS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8775  LVPVEPDK  8798
             L PV P K
Sbjct  612   LLPVAPSK  619


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2308  PFSTV  2294
             PF TV
Sbjct  748   PFPTV  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7854  KPTKPPTII  7828
             K   PP II
Sbjct  1233  KAAMPPQII  1241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6280  ERICI  6294
             ER CI
Sbjct  1559  ERECI  1563


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1797  SLRSLFG  1817
             SL  LFG
Sbjct  1617  SLKVLFG  1623


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  642   CLKLPW  625
             CL  PW
Sbjct  1713  CLQHPW  1718


>ref|NP_444255.3|  myosin light chain kinase, smooth muscle isoform 3A [Homo sapiens]
Length=1863

 GENE ID: 4638 MYLK | myosin light chain kinase [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  2571  IAGDPF  2554
             IAGDPF
Sbjct  744   IAGDPF  749


 Score = 18.9 bits (37),  Expect(2) =  1572
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  6232  KKLLFQYQ  6255
             KKLL Q Q
Sbjct  1113  KKLLLQCQ  1120


 Score = 18.0 bits (35),  Expect(2) =  1572
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  6155  LKCTDLKNDTN  6187
             LK  D KND N
Sbjct  1067  LK-KDVKNDVN  1076


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7306  SGNRSFV  7326
             S NRSFV
Sbjct  255   SANRSFV  261


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/10 (50%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  8511  WLEAQEEEEV  8540
             WLE ++ E+V
Sbjct  860   WLEEEDGEDV  869


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 5/15 (33%)
 Frame = -1

Query  9031  PVPPRP-----RLPG  9002
             P PPRP     R PG
Sbjct  374   PAPPRPATFPTRQPG  388


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4753  CTSELI  4736
             CT ELI
Sbjct  1842  CTAELI  1847


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +3

Query  6891  TV-LIVEGNF  6917
             TV L VEG F
Sbjct  118   TVELTVEGSF  127


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 0/10 (0%)
 Frame = +3

Query  7629  NRFGITRPGW  7658
             +R+G  RPGW
Sbjct  844   DRYGSLRPGW  853


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5213  IWLH  5224
             IWLH
Sbjct  655   IWLH  658


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1293  TLLVQN  1310
             TLLV+N
Sbjct  1309  TLLVEN  1314


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 1/19 (5%)
 Frame = +1

Query  952   MRKLQNGIECIQCMQGLLH  1008
             MR    G+E I+  QG  H
Sbjct  1566  MRQISEGVEYIH-KQGIVH  1583


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  7041  IICFIL  7024
             +IC+IL
Sbjct  1649  VICYIL  1654


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  976   ECIQCMQ  996
             +C QC+Q
Sbjct  1658  DCTQCLQ  1664


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8600  IYSCLV  8583
             +Y CLV
Sbjct  230   VYTCLV  235


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1263  SQEVK  1277
             SQEVK
Sbjct  422   SQEVK  426


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  4863  SFSSIL  4846
             SFSS+L
Sbjct  515   SFSSVL  520


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 2/16 (12%)
 Frame = +2

Query  3899  KCQLKGEAMHGQVDCS  3946
             KC  K +A  GQ +CS
Sbjct  1169  KCVAKNDA--GQAECS  1182


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 7/18 (38%)
 Frame = +1

Query  712   IRSAKITL*CRTSRGKWY  765
             IRS   TL    S   WY
Sbjct  1343  IRSSSLTL----S---WY  1353


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  1468  IIMVAEFV  1445
             I+MV E V
Sbjct  1534  IVMVLEIV  1541


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = -1

Query  4984  HLGL----TMCPNK  4955
             HL L     MC NK
Sbjct  1583  HLDLKPENIMCVNK  1596


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 8/30 (26%)
 Frame = +3

Query  8562  VPLRPMTYKAAVDLSHFLKEKGGLEGL-IH  8648
             VPL P    A V  S    EK G++ L IH
Sbjct  199   VPLQP---SARVSVS----EKNGMQVLEIH  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -1

Query  7666  VPLHP-GRV  7643
             VPL+P  RV
Sbjct  199   VPLQPSARV  207


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = -2

Query  7563  QPQIPR-----SC  7540
             QPQ PR     SC
Sbjct  313   QPQPPRESKLESC  325


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4034  EVIPAETG  4057
             EV P +TG
Sbjct  684   EVFPEDTG  691


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2321  DFREL  2335
             DFR+L
Sbjct  896   DFRDL  900


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  4987  NIKQDI  5004
             NI Q+I
Sbjct  1505  NIRQEI  1510


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  5757  RRQWQ  5771
             RR WQ
Sbjct  1691  RRKWQ  1695


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -1

Query  5575  LDESDCSDELFV  5540
             L E  C  EL V
Sbjct  1837  LGEATCTAELIV  1848


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7282  SGAERK  7299
             SG ERK
Sbjct  367   SGEERK  372


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3929  GQVDCS  3946
             GQV CS
Sbjct  590   GQVSCS  595


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4164  QAALTV  4147
             QA LTV
Sbjct  707   QAVLTV  712


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 4/11 (36%)
 Frame = -1

Query  7444  SPQQI----VL  7424
             SPQQ+    VL
Sbjct  947   SPQQVDFRSVL  957


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2469  LKSSSK  2452
             LKS SK
Sbjct  1059  LKSASK  1064


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6771  LMLQC  6757
             L+LQC
Sbjct  1115  LLLQC  1119


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7005  SLPSVL  6988
             SLP VL
Sbjct  1209  SLPPVL  1214


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6749  RQAHC  6763
             RQ HC
Sbjct  1301  RQEHC  1305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  3962  LDCTH  3976
             LDCT+
Sbjct  1657  LDCTQ  1661


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 7/16 (43%), Gaps = 4/16 (25%)
 Frame = -1

Query  6616  FSIV----REIDRSNY  6581
             FS V     E DR  Y
Sbjct  89    FSLVIHAVHEEDRGKY  104


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2777  GMEVL  2763
             GM+VL
Sbjct  214   GMQVL  218


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2460  KTSGSI  2477
             KTS SI
Sbjct  340   KTSSSI  345


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  6888  VTISGSPP  6865
             V +SG PP
Sbjct  644   VQVSGNPP  651


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  1300  WSKMRTQI  1323
             W K R QI
Sbjct  1271  WMKFRKQI  1278


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  1408  IRQE  1419
             IRQE
Sbjct  1506  IRQE  1509


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +3

Query  618   KDTK--EA  635
             KDTK  EA
Sbjct  1670  KDTKNMEA  1677


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3480  EDKKLS  3497
             E KKLS
Sbjct  1676  EAKKLS  1681


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 10/25 (40%)
 Frame = +2

Query  8231  AVAEG----------TDRVIEVVQG  8275
             AVAE           T R  EVV+G
Sbjct  1748  AVAEEKPHVKPYFSKTIRDLEVVEG  1772


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 3/16 (18%)
 Frame = +3

Query  807   VVEEKAFSPEVIPMFS  854
             V EEK   P V P FS
Sbjct  1749  VAEEK---PHVKPYFS  1761


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8887  SNTSLS  8870
             S TSLS
Sbjct  13    SKTSLS  18


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4189  FLLD  4178
             FLLD
Sbjct  79    FLLD  82


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7342  SQEPKE  7325
             SQE KE
Sbjct  422   SQEVKE  427


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6703  RTRES  6717
             RTR+S
Sbjct  478   RTRDS  482


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  7917  DNGEYPCL  7894
             D G Y CL
Sbjct  577   DHGTYTCL  584


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4490  LVLSKV  4473
             LVL KV
Sbjct  779   LVLKKV  784


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 4/15 (26%)
 Frame = +1

Query  3598  CIRNHSSTT----RS  3630
             C R H  TT    RS
Sbjct  1077  CKRGHAGTTDNEKRS  1091


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3857  LPPVVAKE  3880
             LPPV   E
Sbjct  1210  LPPVLGTE  1217


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  277   LASCR  263
             LA CR
Sbjct  1381  LATCR  1385


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  7908  HHYRFR  7925
             H Y FR
Sbjct  1398  HEYKFR  1403


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  7633  LFQRFI  7616
             LF+R I
Sbjct  1546  LFERII  1551


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6004  PQPTRSS  6024
             PQP R S
Sbjct  314   PQPPRES  320


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5394  RIYWL  5380
             RI WL
Sbjct  544   RITWL  548


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8714  AELH  8725
             AELH
Sbjct  566   AELH  569


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +2

Query  7091  GQIRCSSNIT  7120
             GQ+ CS  +T
Sbjct  590   GQVSCSAWVT  599


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6651  LIVQDP  6668
             L VQ+P
Sbjct  710   LTVQEP  715


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6767  CYNVLV  6750
             CY  LV
Sbjct  1307  CYTLLV  1312


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = +3

Query  5184  RMKLLDIFLGFG  5219
             R KL D    FG
Sbjct  1600  RIKLID----FG  1607


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3861  GRLKSLA  3841
             GRL S+A
Sbjct  1705  GRLSSMA  1711


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6234  KTALSI  6251
             KT LS+
Sbjct  14    KTSLSV  19


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3863  PVVAK  3877
             PVV K
Sbjct  134   PVVSK  138


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3396  MGSFS  3382
             MG FS
Sbjct  177   MGRFS  181


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  8775  LVPVEPDK  8798
             L PV P K
Sbjct  612   LLPVAPSK  619


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2308  PFSTV  2294
             PF TV
Sbjct  748   PFPTV  752


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7854  KPTKPPTII  7828
             K   PP II
Sbjct  1233  KAAMPPQII  1241


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6280  ERICI  6294
             ER CI
Sbjct  1559  ERECI  1563


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1797  SLRSLFG  1817
             SL  LFG
Sbjct  1617  SLKVLFG  1623


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  642   CLKLPW  625
             CL  PW
Sbjct  1662  CLQHPW  1667


>gb|ABG38428.1|  immunglobulin heavy chain variable region [Homo sapiens]
Length=125


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  19    LRLSC--AASGFTFSSYWMSWVR  39


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  70    TISRDNAKN  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  51    NIKQD  55


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  56    GSEKYYVD  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  61    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  90


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  34    WMSWVRQ  40


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2667  DPTYKSSMY  2641
             DP Y SS Y
Sbjct  100   DPPYDSSGY  108


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  54    QDGSEKY  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  32    SYWMSWV  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  23    CAASGF  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  50   ANIKQD  55


>gb|ABG38426.1|  immunglobulin heavy chain variable region [Homo sapiens]
Length=124


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3762  SGKYY  3776
             SGKYY
Sbjct  56    SGKYY  60


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2667  DPTYKSSMY  2641
             DP Y SS Y
Sbjct  99    DPPYDSSGY  107


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  383  GK---NSVKAR  406
            GK   +SVK R
Sbjct  57   GKYYVDSVKGR  67


>gb|ABG38424.1|  immunglobulin heavy chain variable region [Homo sapiens]
Length=120


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  19    LRLSC--AASGFTFSSYWMSWVR  39


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  70    TISRDNAKN  78


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  51    NIKQD  55


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  56    GSEKYYVD  63


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  61    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  90


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  34    WMSWVRQ  40


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  54    QDGSEKY  60


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  32    SYWMSWV  38


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  23    CAASGF  28


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  50   ANIKQD  55


>gb|ABG38439.1|  immunglobulin heavy chain variable region [Homo sapiens]
Length=121


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSERYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVRGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|ABG38430.1|  immunglobulin heavy chain variable region [Homo sapiens]
Length=124


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  2667  DPTYKSSMY  2641
             DP Y SS Y
Sbjct  99    DPPYDSSGY  107


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|ABG38383.1|  immunoglobulin light chain variable region [Homo sapiens]
Length=106


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = +2

Query  7793  ITNWL-WY  7813
             IT WL WY
Sbjct  29    ITGWLAWY  36


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2032  TYTCQH  2049
             TY CQH
Sbjct  85    TYYCQH  90


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7005  TQSPS  7019
             TQSPS
Sbjct  5     TQSPS  9


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  777  SPRTLNAWV  803
            SP TL A V
Sbjct  7    SPSTLSASV  15


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5458  YNSNW  5444
             YNS W
Sbjct  91    YNSYW  95


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8847  SQGVTSW  8827
             SQ +T W
Sbjct  26    SQSITGW  32


>emb|CAJ90638.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=123


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/17 (58%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = -3

Query  4883  VYLCAISLF----P-PF  4848
             VY CA SLF    P PF
Sbjct  94    VYYCARSLFWSGYPSPF  110


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7276  EKSGAERKK  7302
             E SGAE KK
Sbjct  6     EQSGAEVKK  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1791  LTSLRS  1808
             L SLRS
Sbjct  84    LSSLRS  89


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  5264  KYPHKFH  5244
             KY +KF+
Sbjct  60    KYSQKFQ  66


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1254  EQASQEVK  1277
             EQ   EVK
Sbjct  6     EQSGAEVK  13


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1718  LFWWG  1704
             LFW G
Sbjct  101   LFWSG  105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6762  VTLVEQNG  6785
             V L EQ G
Sbjct  2     VQLLEQSG  9


>ref|NP_001035228.1|  chemokine-like factor isoform e [Homo sapiens]
Length=113

 GENE ID: 51192 CKLF | chemokine-like factor [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  8829  WCSLLYWPLL  8800
             W   L+WPLL
Sbjct  73    W---LFWPLL  79


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  1241  FI-----EPVYIVSKGF  1206
             FI     EP YIV  GF
Sbjct  36    FIIAQAPEP-YIVITGF  51


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = -1

Query  1333  IVLQSGFAFWTNKVSVIQFF  1274
             IV   GF      V VI FF
Sbjct  46    IVI-TGFE-----VTVILFF  59


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -1

Query  4549  FYVTIILYY  4523
             F VT+IL++
Sbjct  51    FEVTVILFF  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4792  YVVIT  4778
             Y+VIT
Sbjct  45    YIVIT  49


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6288  MHFFI  6302
             M FFI
Sbjct  33    MTFFI  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +2

Query  2165  WPLTEEKIKALV  2200
             WPL +  I  LV
Sbjct  76    WPLLDI-INSLV  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2925  LTLIP  2911
             L LIP
Sbjct  97    LALIP  101


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8898  QTSTLT  8881
             +T TLT
Sbjct  102   ETTTLT  107


>gb|AAH63289.1|  Complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 3/15 (20%)
 Frame = +1

Query  157   SQCGKSLAVAPEQGP  201
             SQ   S AV P Q P
Sbjct  1236  SQ---SNAVSPTQAP  1247


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|NP_009224.2|  complement C4-A preproprotein [Homo sapiens]
 emb|CAQ09284.1|  complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>emb|CAI41782.1|  complement component 4A (Rodgers blood group) [Homo sapiens]
 emb|CAI41869.1|  complement component 4A (Rodgers blood group) [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|NP_078846.2|  ribonuclease H2 subunit B isoform 1 [Homo sapiens]
Length=312

 GENE ID: 79621 RNASEH2B | ribonuclease H2, subunit B [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 6/16 (37%)
 Frame = -2

Query  4839  LPDPNASLFLLYADPN  4792
             LP+P ASL      PN
Sbjct  234   LPEPSASL------PN  243


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7426  LLLHY  7412
             LLLHY
Sbjct  96    LLLHY  100


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  8065  LQLPPLERL  8091
             L LP LE L
Sbjct  129   LKLPGLEKL  137


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/13 (46%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  2662  YIQIIHVLIDNYV  2624
             YI   H LI +Y+
Sbjct  208   YIRYAHGLISDYI  220


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  6601  EIDRSNYY  6578
             EID   YY
Sbjct  149   EIDNKKYY  156


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  25   EPGSSLAN  48
            EP  SL N
Sbjct  236  EPSASLPN  243


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  9110  EPGSSLAN  9133
             EP  SL N
Sbjct  236   EPSASLPN  243


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  3743  YLLVHFL  3723
             +LL H+L
Sbjct  95    FLLLHYL  101


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 6/16 (37%)
 Frame = -1

Query  1303  TNKVSV---IQ---FF  1274
             TN V V   +Q   FF
Sbjct  180   TNNVNVSSRVQSTAFF  195


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  8598  DLSHFLK  8618
             DLS +LK
Sbjct  227   DLSKYLK  233


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9089  DPVQAK  9072
             +PV+AK
Sbjct  254   EPVEAK  259


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  4417  KTNYKNSK  4440
             KT  KNSK
Sbjct  271   KTEKKNSK  278


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8831  LVTPC  8845
             LV PC
Sbjct  40    LVNPC  44


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8628  GLEGLIH  8648
             GLE L H
Sbjct  133   GLEKLLH  139


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  376  IDGKKF  393
            ID KK+
Sbjct  150  IDNKKY  155


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  5354  YSTEESKKW  5380
             YS E   KW
Sbjct  158   YSKEKTLKW  166


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2072  ESTDFF  2055
             +ST FF
Sbjct  190   QSTAFF  195


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  1678  FFRADQ  1695
             FF  DQ
Sbjct  194   FFSGDQ  199


>ref|NP_001077379.1|  signal-regulatory protein beta-1 isoform 2 precursor [Homo sapiens]
Length=181

 GENE ID: 10326 SIRPB1 | signal-regulatory protein beta 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3080  FLLLSLLMG  3054
             FLL+ LL+G
Sbjct  14    FLLMTLLLG  22


 Score = 19.7 bits (39),  Expect(2) =  2943
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  2483  FTIPSINNETP  2515
             F I SI N TP
Sbjct  103   FSI-SISNITP  112


 Score = 17.2 bits (33),  Expect(2) =  2943
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2606  FRKQNPD  2626
             FRK  PD
Sbjct  123   FRKGSPD  129


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 8/16 (50%)
 Frame = -2

Query  8637  LPVP--------PFLL  8614
             +PVP        PFLL
Sbjct  1     MPVPASWPHLPSPFLL  16


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -3

Query  3098  LAPASVFLLLSLLMG  3054
             LAP    LL  LL+G
Sbjct  148   LAPTAP-LLVALLLG  161


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  4365  PALYPPIP-PFLL  4330
             PA  P  P PFLL
Sbjct  4     PASWPHLPSPFLL  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             LD SIS
Sbjct  101   LDFSIS  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2144  PFLALILL  2121
             PFL + LL
Sbjct  13    PFLLMTLL  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  6051  LKFSVTFTNTT  6019
             L FS+   N T
Sbjct  101   LDFSISISNIT  111


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = +2

Query  1760  AGADRQ-------GTVSFNFPQVT  1810
             AGA R+       G     FP VT
Sbjct  71    AGAGRELIYNQKEG----HFPRVT  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +2

Query  2330  ELNKRTQ-DF  2356
             EL KR   DF
Sbjct  94    ELTKRNNLDF  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2087  LNFPIS  2104
             L+F IS
Sbjct  101   LDFSIS  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  1591  SFPHFQQPFFL  1559
             S PH   PF L
Sbjct  6     SWPHLPSPFLL  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2771  PFLWM  2785
             PFL M
Sbjct  13    PFLLM  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8873  LRVIHP  8856
             L VI+P
Sbjct  33    LQVIQP  38


>ref|NP_434700.2|  caspase recruitment domain-containing protein 9 isoform 1 [Homo 
sapiens]
Length=536

 GENE ID: 64170 CARD9 | caspase recruitment domain family, member 9
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  9022  AGLGSGEP  9045
             AGL SGEP
Sbjct  480   AGLSSGEP  487


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 6/17 (35%)
 Frame = +2

Query  4805  YRRKRLAFGSGSLHRME  4855
             YRRKR       L  M+
Sbjct  502   YRRKR------ALRKMQ  512


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4850  MEEKE  4864
             MEEKE
Sbjct  319   MEEKE  323


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 6/17 (35%)
 Frame = +2

Query  6959  NSTWSTEGSNN--TEGS  7003
             N T    GS+N  TEGS
Sbjct  524   NTT----GSDNTDTEGS  536


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  235  SRELLW  218
            S ELLW
Sbjct  243  SQELLW  248


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  7170  SSDLEE  7187
             SSDLE+
Sbjct  424   SSDLED  429


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = +1

Query  940  KRPSMRKLQNG  972
            KR  +RK+Q G
Sbjct  505  KR-ALRKMQKG  514


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3374  TIISLR  3357
             TI SLR
Sbjct  300   TIFSLR  305


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  915  HQAAMQMLKE  944
            HQ   Q LKE
Sbjct  157  HQERVQRLKE  166


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  1200  PKEPF  1214
             PK+PF
Sbjct  461   PKQPF  465


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  191  NRDL  202
            NRDL
Sbjct  203  NRDL  206


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4063  NSIFS  4077
             N IFS
Sbjct  299   NTIFS  303


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/21 (38%), Positives = 10/21 (47%), Gaps = 9/21 (42%)
 Frame = +2

Query  1517  LWQRRAHSQKLQGP*EKGLLE  1579
             LW+       LQ   EK LL+
Sbjct  247   LWE-------LQQ--EKALLQ  258


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  7418  QQQNNLLRA  7444
             QQ+  LL A
Sbjct  251   QQEKALLQA  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4554  CQEEKQ  4571
             C EEK+
Sbjct  318   CMEEKE  323


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5074  CLVLR  5088
             CL LR
Sbjct  329   CLALR  333


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  7189  SSSRSEDLGL  7160
             S  RS++L L
Sbjct  431   SPRRSQELSL  440


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  1874  TGADDT  1891
             TG D+T
Sbjct  526   TGSDNT  531


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  827  ESLLFYY  807
            ESL  YY
Sbjct  81   ESLELYY  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  848  VFSII  862
            VFS I
Sbjct  102  VFSMI  106


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2453  LDEDFR  2470
             L+ED R
Sbjct  283   LEEDWR  288


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8911  ARRL  8900
             ARRL
Sbjct  313   ARRL  316


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +3

Query  6078  RCM  6086
             RCM
Sbjct  317   RCM  319


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6989  NTEGSD  7006
             NT GSD
Sbjct  524   NTTGSD  529


>ref|NP_001093326.2|  NF-kappa-B essential modulator isoform b [Homo sapiens]
Length=487

 GENE ID: 8517 IKBKG | inhibitor of kappa light polypeptide gene enhancer in
B-cells, kinase gamma [Homo sapiens] (Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/14 (57%), Positives = 9/14 (64%), Gaps = 1/14 (7%)
 Frame = +2

Query  1655  LQGKAREFSSEQTR  1696
             L+G AR   SEQ R
Sbjct  238   LEGRARA-ASEQAR  250


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/12 (58%), Positives = 9/12 (75%), Gaps = 0/12 (0%)
 Frame = +2

Query  1964  VRQYDQILIEIC  1999
             +RQ +QIL E C
Sbjct  133   IRQSNQILRERC  144


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  4977  PRCEYQA  4997
             P C+YQA
Sbjct  466   PKCQYQA  472


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 10/18 (55%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = +1

Query  184  APEQGP--ESERETRGAL  231
            A EQ    ESERE   AL
Sbjct  245  ASEQARQLESERE---AL  259


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 1/8 (12%)
 Frame = +2

Query  2111  ETVPVKLK  2134
             ETVPV LK
Sbjct  364   ETVPV-LK  370


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = -3

Query  5999  WVHRHVW  5979
             W  RH W
Sbjct  68    WMNRHLW  74


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = +3

Query  8361  KSSVIGWPTVRERMR  8405
             KSSV+G     ER R
Sbjct  314   KSSVVG----SERKR  324


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  1758  KQEPIDK  1778
             KQE IDK
Sbjct  345   KQEVIDK  351


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/23 (43%), Positives = 10/23 (43%), Gaps = 11/23 (47%)
 Frame = -1

Query  6973  TPSTIKPSTIKQLC*ITVEKFPS  6905
             TP TI PS    L       FPS
Sbjct  17    TPQTINPS----L-------FPS  28


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +1

Query  8161  ESPTVLESGTKE  8196
             ES   LE  TKE
Sbjct  223   ESQSRLEAATKE  234


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  316  RRLEGER  336
            R LE ER
Sbjct  250  RQLESER  256


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8444  RCCS  8433
             RCCS
Sbjct  45    RCCS  48


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5839  PKEHGAP  5819
             P E+GAP
Sbjct  110   PSEQGAP  116


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2702  EELRQHL  2722
             E+L Q+L
Sbjct  329   EDLKQQL  335


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5704  ILRQR  5718
             ILR+R
Sbjct  139   ILRER  143


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2258  DFQAQ  2244
             DFQA+
Sbjct  379   DFQAE  383


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1707  PPEE  1718
             PPEE
Sbjct  456   PPEE  459


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6133  INPTL  6147
             INP L
Sbjct  21    INPSL  25


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1198  PCLMSR  1181
             PC M R
Sbjct  66    PCWMNR  71


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4853  EEKE  4864
             EEKE
Sbjct  156   EEKE  159


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8473  QVAIQQL  8493
             QVA +QL
Sbjct  299   QVAYHQL  305


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  6999  EVTQSP  7016
             EV Q P
Sbjct  430   EVSQAP  435


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1675  FPGLP  1661
             FP LP
Sbjct  26    FPSLP  30


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1050  FLLCHF  1033
             FL+C F
Sbjct  160   FLMCKF  165


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  516  LGQLQPS  536
            LG+LQ S
Sbjct  218  LGELQES  224


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8871  EREVLE  8888
             ERE L+
Sbjct  255   EREALQ  260


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +1

Query  7279  KS---GAERK  7299
             KS   G ERK
Sbjct  314   KSSVVGSERK  323


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  5734  IDRLIERAE  5760
             ID L E AE
Sbjct  349   IDKLKEEAE  357


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  6609  LSVKLTDLI  6583
             L VKL   I
Sbjct  29    LPVKLSSII  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9044  GSPLP  9030
             G PLP
Sbjct  62    GAPLP  66


>ref|NP_002495.2|  transcriptional repressor NF-X1 isoform 1 [Homo sapiens]
 sp|Q12986.2|NFX1_HUMAN  RecName: Full=Transcriptional repressor NF-X1; AltName: Full=Nuclear 
transcription factor, X box-binding protein 1
Length=1120

 GENE ID: 4799 NFX1 | nuclear transcription factor, X-box binding 1
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1534  CPSLPQL  1514
             CP LPQL
Sbjct  584   CPRLPQL  590


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  3212  QKITTESIV  3238
             QKIT E I+
Sbjct  1105  QKITKEPII  1113


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +1

Query  2374  NTTSRRVKKEK  2406
             N  SRRV  EK
Sbjct  304   NKSSRRVDQEK  314


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 18/42 (42%)
 Frame = +2

Query  1685  EQTRAN----SPTRRE----LQVWGRDNNSPSEA-----GAD  1771
             EQT       S TR E    L    R+  SPSE      GAD
Sbjct  126   EQTSDTAGLESSTRSESGTDL----REH-SPSESEKEVVGAD  162


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  8653  KEDKISLICG  8682
             KE K  LICG
Sbjct  707   KEHKCPLICG  716


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/7 (57%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +1

Query  8095  LDCNEDC  8115
             L+C+E+C
Sbjct  945   LECDEEC  951


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1536  CALLCH  1519
             C LLCH
Sbjct  457   CNLLCH  462


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/19 (47%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = +1

Query  190  EQGP-ESERET-----RGA  228
            E+ P ESE E      RGA
Sbjct  148  EHSPSESEKEVVGADPRGA  166


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  7189  SSSRSE---DL  7166
             SS RSE   DL
Sbjct  136   SSTRSESGTDL  146


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  8866  SSIPCRL  8846
             S IPC L
Sbjct  811   SNIPCHL  817


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = -2

Query  1587  FHIS-NS-PF  1564
             FHIS +S PF
Sbjct  964   FHISEDSDPF  973


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  7076  APPISG  7093
             APP+SG
Sbjct  4     APPVSG  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  16   TRSEPGSSL  42
            TRSE G  L
Sbjct  138  TRSESGTDL  146


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  9101  TRSEPGSSL  9127
             TRSE G  L
Sbjct  138   TRSESGTDL  146


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  2733  PHLNRCC  2713
             P+L RCC
Sbjct  588   PQLVRCC  594


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  4356  YPPIP  4342
             YPP+P
Sbjct  756   YPPVP  760


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4808  RRKRLA  4825
             R KRLA
Sbjct  956   RKKRLA  961


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6257  TSIRGK  6274
             T IRGK
Sbjct  1059  TAIRGK  1064


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = -1

Query  5818  SPPP---SPQV  5795
             SPPP   S QV
Sbjct  50    SPPPCHLSRQV  60


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5117  PEDQGPQ  5137
             PED GP+
Sbjct  200   PEDAGPE  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/14 (35%), Positives = 8/14 (57%), Gaps = 6/14 (42%)
 Frame = -1

Query  3151  SCFQIF------KW  3128
             SC+++F      KW
Sbjct  376   SCYHVFHLNCIKKW  389


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6629  QLNTSVEI  6652
             QL  SVEI
Sbjct  924   QLGGSVEI  931


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1264  EACSAL  1247
             E CSAL
Sbjct  949   EECSAL  954


 Score = 16.8 bits (32),  Expect(2) = 15307
 Identities = 6/15 (40%), Positives = 7/15 (46%), Gaps = 3/15 (20%)
 Frame = +2

Query  4235  MNKELKKII---GQV  4270
             MN +   II    QV
Sbjct  1026  MNRDHRRIIHDLAQV  1040


 Score = 15.5 bits (29),  Expect(2) = 15307
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4226  VESMNK  4243
             VE  NK
Sbjct  1008  VEAVNK  1013


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  6106  GSKPK  6120
             GSKPK
Sbjct  77    GSKPK  81


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5162  VSIHC  5148
             VS+HC
Sbjct  492   VSVHC  496


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4813  SPVCRPQ  4793
             S VC PQ
Sbjct  573   SQVCHPQ  579


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1203  KEPFRDY  1223
             KEP  DY
Sbjct  1109  KEPIIDY  1115


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4460  PCNK  4449
             PCNK
Sbjct  91    PCNK  94


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1536  CALLCH  1519
             CA LCH
Sbjct  511   CAELCH  516


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  6484  MYKCQ  6498
             M KCQ
Sbjct  834   MHKCQ  838


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7567  RATPNPQE  7544
             R TP P++
Sbjct  195   RTTPKPED  202


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4334  RKGGIGGYSA  4363
             RKG   GY A
Sbjct  224   RKGVLDGYGA  233


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4197  IPNSC  4183
             IP SC
Sbjct  436   IPHSC  440


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  2356  LGSSIRNT  2379
             LGSS R T
Sbjct  607   LGSSSRKT  614


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  3918  KPCMD  3932
             K CMD
Sbjct  613   KTCMD  617


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8274  PCTT  8263
             PCTT
Sbjct  855   PCTT  858


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5368  EQEME  5382
             E EME
Sbjct  1001  EKEME  1005


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3659  IEQL  3670
             IEQL
Sbjct  348   IEQL  351


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7557  QIPRSC  7540
             +IP SC
Sbjct  435   EIPHSC  440


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3403  SRNLLC  3420
             SR+ LC
Sbjct  537   SRDVLC  542


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  7635  ICSRDL  7618
             IC  DL
Sbjct  560   ICGKDL  565


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7510  PGCGKI  7527
             P CGK+
Sbjct  620   PSCGKV  625


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4072  ICCFLPC  4052
             I C LPC
Sbjct  820   ISCGLPC  826


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4059  CPVSA  4045
             CPV A
Sbjct  877   CPVTA  881


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +2

Query  8183  QELKNSAVSLLN  8218
             QE KNS    LN
Sbjct  23    QEKKNSG---LN  31


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  4707  RHHYESPHP  4733
             R  Y SP P
Sbjct  45    RRNYSSPPP  53


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4939  ESEKQ  4925
             ESEK+
Sbjct  153   ESEKE  157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +3

Query  6678  QEKESVSRED  6707
             QEK  V R+D
Sbjct  312   QEKCTVRRQD  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  645  SCLK  634
            SCLK
Sbjct  556  SCLK  559


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  6155  LKCTDLKND  6181
             L CT LK +
Sbjct  670   LPCTSLKSE  678


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 3/10 (30%)
 Frame = +2

Query  8375  WMAYCKGKNE  8404
             W   C GK E
Sbjct  802   W---CMGKHE  808


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  2550  PCGSTL  2533
             PC  TL
Sbjct  825   PCSATL  830


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 8/18 (44%), Positives = 8/18 (44%), Gaps = 8/18 (44%)
 Frame = -3

Query  1088  CHPSYLFLKGTSSSCYVT  1035
             CH        TSS C VT
Sbjct  871   CH--------TSSPCPVT  880


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  108  ARLLCD  125
            ARL CD
Sbjct  943  ARLECD  948


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  1540  PEIAGP  1557
             PE AGP
Sbjct  200   PEDAGP  205


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  9128  PESSQA  9111
             P+SS+A
Sbjct  216   PDSSEA  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  43   PESSQA  26
            P+SS+A
Sbjct  216  PDSSEA  221


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -3

Query  6179  HSSNQC--TLN  6153
             H SN C   LN
Sbjct  495   HCSNPCENILN  505


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6045  ILTCG  6059
             IL CG
Sbjct  503   ILNCG  507


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  188  GATARD  171
            G T RD
Sbjct  534  GSTSRD  539


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4403  TKEL  4414
             TKEL
Sbjct  667   TKEL  670


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8595  QLPCKS  8578
             +LPC S
Sbjct  669   ELPCTS  674


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5278  FHSCPS  5261
             +HSC S
Sbjct  783   YHSCHS  788


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4828  KCQSL  4814
             KCQ L
Sbjct  836   KCQRL  840


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 4/12 (33%)
 Frame = -2

Query  4734  LDEGFH----SD  4711
             L E FH    SD
Sbjct  960   LAEAFHISEDSD  971


>sp|Q29980.1|MICB_HUMAN  RecName: Full=MHC class I polypeptide-related sequence B; Short=MIC-B; 
Flags: Precursor
Length=383

 GENE ID: 4277 MICB | MHC class I polypeptide-related sequence B [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 4/14 (28%)
 Frame = +2

Query  6032  NVTENFNMWKND-M  6070
             NVT NF  WK D M
Sbjct  164   NVT-NF--WKEDAM  174


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2829  CCQKKT  2846
             CC KKT
Sbjct  330   CCKKKT  335


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  904  QWGDI  918
            QWGD+
Sbjct  252  QWGDV  256


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2078  QSESTDF  2058
             QS+ TDF
Sbjct  304   QSQRTDF  310


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5318  FQNWVST  5338
             +Q WV T
Sbjct  264   YQTWVAT  270


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  8601  LSHFLKEKGGLEGLIHSQRRQDI  8669
             L H   +KGGL    HS   Q+I
Sbjct  100   LTHIKDQKGGL----HSL--QEI  116


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  9128  PESSQAQ  9108
             P+SS AQ
Sbjct  153   PQSSRAQ  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  43   PESSQAQ  23
            P+SS AQ
Sbjct  153  PQSSRAQ  159


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 5/13 (38%)
 Frame = -1

Query  4666  CFTKLFHVLILIL  4628
             CF     V I IL
Sbjct  319   CF-----VIIIIL  326


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3453  PNLVSL  3436
             P LVSL
Sbjct  341   PELVSL  346


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8962  QQFLKY  8945
             Q FL Y
Sbjct  54    QPFLRY  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/18 (38%), Positives = 7/18 (38%), Gaps = 10/18 (55%)
 Frame = +2

Query  608  DRDKRHQGSFRQDRGRAK  661
            DR KR          RAK
Sbjct  60   DRQKR----------RAK  67


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 4/21 (19%)
 Frame = +2

Query  3497  TLTDTTNQKTELQAIYLALQD  3559
             TLT   +QK  L+     LQ+
Sbjct  99    TLTHIKDQKGGLH----SLQE  115


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3763  QESTI  3777
             QEST+
Sbjct  148   QESTV  152


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5942  AKAYDTE  5962
             AK  DTE
Sbjct  79    AKTWDTE  85


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8514  LEAQE  8528
             LE QE
Sbjct  145   LETQE  149


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2908  VNLTC  2894
             VN TC
Sbjct  209   VNVTC  213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  743  EHPGANGT  766
            EH G  GT
Sbjct  285  EHSGNHGT  292


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1275  KNWMTET  1295
             K W TET
Sbjct  80    KTWDTET  86


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7822  IHNDS  7836
             IH DS
Sbjct  121   IHEDS  125


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  1939  RGNWRFY  1959
             RG   FY
Sbjct  128   RGSRHFY  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5237  VALSH  5223
             V LSH
Sbjct  244   VSLSH  248


>ref|NP_001002029.3|  complement C4-B preproprotein [Homo sapiens]
 emb|CAB89302.1|  dJ34F7.4 (complement component 4A) [Homo sapiens]
 gb|AAR89163.1|  C4B1 [Homo sapiens]
 emb|CAI17475.1|  complement component 4B (Childo blood group) [Homo sapiens]
 emb|CAQ09289.1|  complement component 4B (Childo blood group) [Homo sapiens]
Length=1744

 GENE ID: 721 C4B | complement component 4B (Chido blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6456  IIRRSME  6476
             +I RSM+
Sbjct  1123  VIHRSMQ  1129


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|NP_006056.2|  signal-regulatory protein beta-1 isoform 1 precursor [Homo sapiens]
Length=398

 GENE ID: 10326 SIRPB1 | signal-regulatory protein beta 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -3

Query  3080  FLLLSLLMG  3054
             FLL+ LL+G
Sbjct  14    FLLMTLLLG  22


 Score = 21.8 bits (44),  Expect =   981
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = +3

Query  6990  TLKEVTQSPSHAE  7028
             TL EVTQ P  AE
Sbjct  254   TL-EVTQQPMRAE  265


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4742  TYSWM  4728
             TY WM
Sbjct  308   TYNWM  312


 Score = 19.7 bits (39),  Expect(2) =  2440
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +2

Query  2483  FTIPSINNETP  2515
             F I SI N TP
Sbjct  103   FSI-SISNITP  112


 Score = 17.2 bits (33),  Expect(2) =  2440
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2606  FRKQNPD  2626
             FRK  PD
Sbjct  123   FRKGSPD  129


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 15/32 (46%)
 Frame = +1

Query  5500  ALGISYGrkkrrqrrrAHQNSQ----THQASL  5583
             AL IS           AHQ  +    TH+A L
Sbjct  345   ALEIS-----------AHQKEHGSDITHEAAL  365


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/16 (43%), Positives = 8/16 (50%), Gaps = 8/16 (50%)
 Frame = -2

Query  8637  LPVP--------PFLL  8614
             +PVP        PFLL
Sbjct  1     MPVPASWPHLPSPFLL  16


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  2942  LRGTKALTEVI  2974
             LRGT  L E I
Sbjct  239   LRGTANLSEAI  249


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 9/20 (45%)
 Frame = -1

Query  5842  HPKEHG---------APSPP  5810
             H KEHG         AP  P
Sbjct  351   HQKEHGSDITHEAALAPTAP  370


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 1/15 (6%)
 Frame = -3

Query  3098  LAPASVFLLLSLLMG  3054
             LAP    LL  LL+G
Sbjct  365   LAPTAP-LLVALLLG  378


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/18 (33%), Positives = 8/18 (44%), Gaps = 10/18 (55%)
 Frame = +3

Query  3840  WL----------VILTCH  3863
             WL          V+LTC+
Sbjct  314   WLLVNTCAHRDDVVLTCQ  331


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1021  ENQGEVT  1041
             ENQ  VT
Sbjct  265   ENQANVT  271


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 11/22 (50%)
 Frame = -2

Query  4179  IPAHQ---------QAALTVAP  4141
             I AHQ         +AAL  AP
Sbjct  348   ISAHQKEHGSDITHEAAL--AP  367


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 1/13 (7%)
 Frame = -2

Query  4365  PALYPPIP-PFLL  4330
             PA  P  P PFLL
Sbjct  4     PASWPHLPSPFLL  16


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  6532  SINSTA  6549
             SI STA
Sbjct  207   SIHSTA  212


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  6585  LDLSIS  6602
             LD SIS
Sbjct  101   LDFSIS  106


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  2144  PFLALILL  2121
             PFL + LL
Sbjct  13    PFLLMTLL  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -2

Query  6051  LKFSVTFTNTT  6019
             L FS+   N T
Sbjct  101   LDFSISISNIT  111


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 9/24 (37%), Positives = 10/24 (41%), Gaps = 11/24 (45%)
 Frame = +2

Query  1760  AGADRQ-------GTVSFNFPQVT  1810
             AGA R+       G     FP VT
Sbjct  71    AGAGRELIYNQKEG----HFPRVT  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 1/10 (10%)
 Frame = +2

Query  2330  ELNKRTQ-DF  2356
             EL KR   DF
Sbjct  94    ELTKRNNLDF  103


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2087  LNFPIS  2104
             L+F IS
Sbjct  101   LDFSIS  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  2017  TYSFMS  2000
             TY  MS
Sbjct  308   TYNWMS  313


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1189  MSRMLV  1172
             MS +LV
Sbjct  312   MSWLLV  317


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  8946  TPDAALGP  8923
             T +AAL P
Sbjct  360   THEAALAP  367


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  1591  SFPHFQQPFFL  1559
             S PH   PF L
Sbjct  6     SWPHLPSPFLL  16


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2771  PFLWM  2785
             PFL M
Sbjct  13    PFLLM  17


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  8873  LRVIHP  8856
             L VI+P
Sbjct  33    LQVIQP  38


>ref|NP_001129204.1|  target of Myb protein 1 isoform 2 [Homo sapiens]
Length=493

 GENE ID: 10043 TOM1 | target of myb1 (chicken) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  5162  LELLEEL  5182
             LELL+EL
Sbjct  251   LELLQEL  257


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 5/24 (20%)
 Frame = +3

Query  1716  ESFRSGVETTTPPQKQEP----ID  1775
             E FR G +TT  P   EP    ID
Sbjct  302   ERFRTG-QTTKAPSEAEPAADLID  324


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8409  AEPAAD  8426
             AEPAAD
Sbjct  316   AEPAAD  321


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/21 (47%), Positives = 10/21 (47%), Gaps = 8/21 (38%)
 Frame = -1

Query  1834  CD------EGSLPKSDLREVK  1790
             CD      EG  PK  LR VK
Sbjct  37    CDIINETEEG--PKDALRAVK  55


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
 Frame = -2

Query  7881  IEST-AKTILKPTKPPTII  7828
             +ES    TIL    PPTI+
Sbjct  95    VESVLVRTILPKNNPPTIV  113


 Score = 19.7 bits (39),  Expect(2) =  3571
 Identities = 9/15 (60%), Positives = 9/15 (60%), Gaps = 2/15 (13%)
 Frame = -3

Query  5939  LMHKIEWWLLPSTQV  5895
             LM  IE WL  ST V
Sbjct  416   LMEDIEQWL--STDV  428


 Score = 16.3 bits (31),  Expect(2) =  3571
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 2/11 (18%)
 Frame = -1

Query  5827  GAPSPP--PSP  5801
             G P PP  P P
Sbjct  468   GPPGPPSGPAP  478


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2156  LLGHPF  2139
             LLG PF
Sbjct  4     LLGNPF  9


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +1

Query  16   TRSEPGSSLAN  48
            TR   GSSLA+
Sbjct  372  TR---GSSLAD  379


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 3/11 (27%)
 Frame = +2

Query  9101  TRSEPGSSLAN  9133
             TR   GSSLA+
Sbjct  372   TR---GSSLAD  379


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -2

Query  8637  LPVPPFLLKSG  8605
             LP PP L  SG
Sbjct  198   LPAPPIL--SG  206


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4777  NLASPS  4760
             NL SPS
Sbjct  460   NLSSPS  465


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1773  LSAPASEG  1750
             LS P  EG
Sbjct  461   LSSPSAEG  468


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2255  NPYNTPV  2275
             NP+  PV
Sbjct  7     NPFSSPV  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  3756  ALTNLSTC  3733
             ALT L TC
Sbjct  70    ALTVLETC  77


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1089  NNPP  1100
             NNPP
Sbjct  107   NNPP  110


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  4191  LEFP  4202
             LEFP
Sbjct  149   LEFP  152


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1850  QLKEALL  1870
             QL E LL
Sbjct  279   QLTEELL  285


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +3

Query  1284  MTETLLVQNAN  1316
             +TE LL+ N N
Sbjct  280   LTEELLIVNDN  290


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3532  TSNLSS  3549
             T NLSS
Sbjct  332   TGNLSS  337


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  3122  DKFDM  3108
             D FDM
Sbjct  364   DEFDM  368


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  9038  PLPSP  9024
             PLP P
Sbjct  197   PLPAP  201


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1499  LSLVPKIA  1476
             L L+P IA
Sbjct  269   LELIPQIA  276


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7549  QELLI  7535
             +ELLI
Sbjct  282   EELLI  286


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  6730  RKNRKYE  6750
             RK  KYE
Sbjct  381   RKEVKYE  387


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  3246  ERLLNLNCP  3272
             +RL NL  P
Sbjct  456   DRLPNLSSP  464


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2365  NFPEVL  2348
             NF EV+
Sbjct  63    NFHEVM  68


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2049  MLTGVGPT  2026
             MLT   PT
Sbjct  237   MLTELVPT  244


>gb|AAB67980.1|  complement component C4 [Homo sapiens]
 emb|CAM26066.1|  complement component C4B (Childo blood group) [Homo sapiens]
 emb|CAM26069.1|  complement component C4B (Childo blood group) 2 [Homo sapiens]
Length=1744

 GENE ID: 721 C4B | complement component 4B (Chido blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6456  IIRRSME  6476
             +I RSM+
Sbjct  1123  VIHRSMQ  1129


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>ref|NP_624302.1|  mannan-binding lectin serine protease 1 isoform 2 precursor [Homo 
sapiens]
Length=728

 GENE ID: 5648 MASP1 | mannan-binding lectin serine peptidase 1 (C4/C2
activating component of Ra-reactive factor) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = +1

Query  8020  RILGTYLGRSAEP  8058
             RI G   GR AEP
Sbjct  449   RIIG---GRNAEP  458


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 9/18 (50%), Positives = 9/18 (50%), Gaps = 7/18 (38%)
 Frame = +1

Query  8053  EPVPLQ-------LPPLE  8085
             EPVPL        LP LE
Sbjct  561   EPVPLGPHVMPVCLPRLE  578


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  5563  DCSDELF  5543
             +CSD LF
Sbjct  184   ECSDNLF  190


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2056  SNYVD  2042
             SNYVD
Sbjct  705   SNYVD  709


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 0/14 (0%)
 Frame = +3

Query  1077  GWMTNNPPIPVGEI  1118
             GW   NP + V EI
Sbjct  592   GWGISNPNVTVDEI  605


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 1/7 (14%)
 Frame = -3

Query  9074  KSS-CLY  9057
             KSS CLY
Sbjct  208   KSSECLY  214


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +3

Query  7209  EV----NYINIK  7232
             EV    +YI IK
Sbjct  239   EVPCPYDYIKIK  250


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  4321  DEYCHLY  4301
             D YCH Y
Sbjct  154   DHYCHNY  160


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  2786  GYELHPDKWT  2815
             GY LH D  T
Sbjct  171   GYILHTDNRT  180


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4599  WQVMIV  4616
             WQ +IV
Sbjct  463   WQALIV  468


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 10/17 (58%), Gaps = 5/17 (29%)
 Frame = +2

Query  3539  IYLALQD----SGLEVN  3577
             +YL L+D    SG  VN
Sbjct  518   VYLGLHDVRDKSG-AVN  533


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4826  FGSGSL  4843
             FGSG L
Sbjct  481   FGSGAL  486


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  7207  PIVPH  7193
             P+VPH
Sbjct  623   PVVPH  627


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1892  VLEEMSLP  1915
             V E+M LP
Sbjct  711   VWEQMGLP  718


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  8690  VVDPQI  8673
             VV+PQ+
Sbjct  721   VVEPQV  726


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3238  YYAFC  3224
             YYA C
Sbjct  7     YYALC  11


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  61  CLSLNKA  81
           C SL KA
Sbjct  11  CFSLSKA  17


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  9146  CLSLNKA  9166
             C SL KA
Sbjct  11    CFSLSKA  17


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2450  ELKNM  2436
             EL NM
Sbjct  23    ELNNM  27


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  171  ISSSGART  194
            I SSG RT
Sbjct  605  IISSGTRT  612


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 2/8 (25%)
 Frame = +2

Query  4208  PQSQGVVE  4231
             PQS  VVE
Sbjct  718   PQS--VVE  723


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/14 (57%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +1

Query  3349  YPSLSE----IMVP  3378
             YPS SE    I VP
Sbjct  40    YPSDSEVTWNITVP  53


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6356  NLSTY  6342
             NL TY
Sbjct  385   NLTTY  389


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2943  RSLHNCL  2923
             RSL  CL
Sbjct  427   RSLPTCL  433


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3992  ILVAVHV  4012
             IL A HV
Sbjct  492   ILTAAHV  498


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  4782  ITTYWGLH  4805
             +T Y GLH
Sbjct  516   VTVYLGLH  523


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  1653  SYKGRPGNF  1679
             SY  R GN+
Sbjct  633   SYESRSGNY  641


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  6848  LLFYY  6834
             LL YY
Sbjct  4     LLLYY  8


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6141  HSVLV  6155
             HSVL+
Sbjct  273   HSVLI  277


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3522  RLSY  3533
             RLSY
Sbjct  291   RLSY  294


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8404  DELSQ  8418
             D+LSQ
Sbjct  672   DDLSQ  676


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +1

Query  7819  IIHNDSR  7839
             I H D R
Sbjct  173   ILHTDNR  179


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  8649  SQRR  8660
             SQRR
Sbjct  501   SQRR  504


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  6035  VTEN  6046
             VTEN
Sbjct  643   VTEN  646


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  3708  HTKELEEM  3731
             HT EL  M
Sbjct  20    HTVELNNM  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  2853  LSMTYRS  2873
             +S T+RS
Sbjct  114   MSITFRS  120


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3991  YPGSSSC  4011
             YP SS C
Sbjct  206   YPKSSEC  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2591  KILEPF  2608
             K+L PF
Sbjct  254   KVLGPF  259


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3047  YYDPSKD  3067
             YY+  KD
Sbjct  652   YYEGGKD  658


>sp|O15117.2|FYB_HUMAN  RecName: Full=FYN-binding protein; AltName: Full=FYN-T-binding 
protein; AltName: Full=FYB-120/130; Short=p120/p130; AltName: 
Full=SLP-76-associated phosphoprotein; AltName: Full=SLAP-130; 
AltName: Full=Adhesion and degranulation promoting adaptor 
protein; Short=ADAP
Length=783

 GENE ID: 2533 FYB | FYN binding protein [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +1

Query  5758  EDSGN-ESEGEISAL  5799
             EDS N +  GEIS L
Sbjct  243   EDSENKDHAGEISSL  257


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
 Frame = -2

Query  8898  QTS--TLTLLSPGHPSHAGSQ  8842
             QTS  T T L P  PSH  SQ
Sbjct  384   QTSYST-TSLPPPPPSHPASQ  403


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +3

Query  7272  QREEWCREKKEQ  7307
             Q E    EKKEQ
Sbjct  490   QKE---KEKKEQ  498


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2231  SLPFP  2217
             SLPFP
Sbjct  256   SLPFP  260


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  599  ASKDRDK  619
            ASK+R+K
Sbjct  467  ASKEREK  473


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  5413  HPGSQP  5430
             HP SQP
Sbjct  399   HPASQP  404


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  411  KKKYKL  428
            KKK+KL
Sbjct  501  KKKFKL  506


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +3

Query  441  WASRELERFAVNPG  482
            W  R+L+   V PG
Sbjct  722  WGTRDLQ---VKPG  732


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2027  VGPTPVN  2047
             VGP P+N
Sbjct  113   VGPKPIN  119


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +1

Query  5284  NKNSAT  5301
             +KNSAT
Sbjct  336   DKNSAT  341


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5821  PSPPPS  5804
             P PPPS
Sbjct  393   PPPPPS  398


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7529  GIFPQP  7512
             GIFP P
Sbjct  614   GIFPPP  619


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 1/12 (8%)
 Frame = +3

Query  555  ELRSLYNT-VAT  587
            E R LY T V T
Sbjct  704  EIRVLYSTKVTT  715


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 9/16 (56%), Positives = 10/16 (62%), Gaps = 3/16 (18%)
 Frame = -1

Query  4180  DSRP--PTGGPNRSTG  4139
             +SRP   TG PN S G
Sbjct  17    NSRPFRVTG-PNSSSG  31


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  127  LVTRDP  144
            L TRDP
Sbjct  98   LTTRDP  103


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  2659  IQIIH  2645
             IQ+IH
Sbjct  510   IQVIH  514


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  7627  QRFITPTS  7604
             QRF TP S
Sbjct  90    QRFGTPAS  97


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2747  DKKHQKE  2767
             +KK QKE
Sbjct  486   EKKEQKE  492


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  1087  QIIHL  1101
             Q+IHL
Sbjct  511   QVIHL  515


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1335  LKALGP  1352
             LK LGP
Sbjct  148   LKPLGP  153


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8439  ASRDLE  8456
             AS DLE
Sbjct  183   ASQDLE  188


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 2/10 (20%)
 Frame = -3

Query  7535  PLGIFPQPGF  7506
             PL  FP P F
Sbjct  191   PL--FPKPAF  198


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  8628  PPFLLKS  8608
             PPF LKS
Sbjct  426   PPFDLKS  432


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = -1

Query  571  YNDLSSSD-PV  542
            Y+D   SD PV
Sbjct  651  YDDVDTSDFPV  661


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  367  PPLNTD  350
            PPL T+
Sbjct  202  PPLSTE  207


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3701  PMPDRP  3684
             P P+RP
Sbjct  358   PKPNRP  363


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 0/15 (0%)
 Frame = -1

Query  9049  LRARHSPVPPRPRLP  9005
             L A H   PP P LP
Sbjct  406   LPASHPSQPPVPSLP  420


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6638  TSVEIN  6655
             T VEI+
Sbjct  565   TAVEID  570


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +2

Query  4523  VIQDNSDIKV  4552
             VIQ   D KV
Sbjct  737   VIQTTDDTKV  746


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  2463  SSSKG  2449
             SSSKG
Sbjct  220   SSSKG  224


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  1683  EENSLAFP  1660
             E  SL FP
Sbjct  253   EISSLPFP  260


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2713  TTSVEV  2730
             TT VE+
Sbjct  564   TTAVEI  569


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2750  KKHQKE  2767
             KK++KE
Sbjct  686   KKQEKE  691


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  7165  RDLQ  7176
             RDLQ
Sbjct  725   RDLQ  728


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 10/27 (37%), Positives = 10/27 (37%), Gaps = 12/27 (44%)
 Frame = -2

Query  7854  KPTKPPTIIMNNFIYHSQFVMLNQFHK  7774
             KP  PP    N        V L  FHK
Sbjct  359   KPNRPP----N--------VDLTKFHK  373


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  5773  ESEGE  5787
             +SEGE
Sbjct  456   DSEGE  460


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  2747  DKKHQKE  2767
             +KK +KE
Sbjct  472   EKKREKE  478


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = +1

Query  8962  DIELATRDFP  8991
             D++  T DFP
Sbjct  653   DVD--TSDFP  660


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4241  KELKK  4255
             K+LKK
Sbjct  680   KDLKK  684


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  7481  WGIKQLQ  7501
             WG   LQ
Sbjct  722   WGTRDLQ  728


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  3459  AFPNL  3445
             AFP L
Sbjct  169   AFPKL  173


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  7926  PTSQP  7940
             P SQP
Sbjct  400   PASQP  404


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  2902  LTCPIQ  2885
             LT PIQ
Sbjct  506   LTGPIQ  511


>gb|AAB59537.1|  complement component C4A [Homo sapiens]
Length=1754

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1727  LC--RSTRQR  1734


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  324   HISLSKAEFQD---ALEKLNMGI  343


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1261  RNPSDPMPQ  1269


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  38    LFSPSVVHL  46


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  761   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  796


 Score = 18.5 bits (36),  Expect(2) =  2399
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1315  TQDTVI  1320


 Score = 18.0 bits (35),  Expect(2) =  2399
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  133   SL-SRTTNIQG  142


 Score = 18.0 bits (35),  Expect(2) =  2399
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  163   YNPGQRVRY  171


 Score = 17.6 bits (34),  Expect(2) =  2399
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1309  QGGFRSTQD  1317


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  702   EKLGQYASPT  711


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1479  TVCIWRN-----------------------GKVGLSGM  1493


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  106   DAKSCGLHQ-LLR  117


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  549   HLAPSFYFVA  558


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  648   CGPGGGDSA  656


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1607  RQRRA  1611


 Score = 18.5 bits (36),  Expect(2) =  6267
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1303  TRQ---GSFQGG  1311


 Score = 15.5 bits (29),  Expect(2) =  6267
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1301  WLTR  1304


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1156  AFVTI  1160


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1467  KVVEE  1471


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  226  WKIS---AR  231


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  262   KPYILT  267


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  478   PPSGGP  483


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1100  SLAQEQV  1106


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4155  LTVAPVKLL  4129
             LT APV LL
Sbjct  1215  LTKAPVDLL  1223


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1301  WLTRQ  1305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1301  WLTRQ  1305


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1563  SAT--LYDYYNP  1572


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  437   NTDGSGQVSIPIIIPQTI  454


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  862   LELRPVL  868


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  978   DPNM  981


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1042  DKTEQW  1047


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8927  PRAAS  8941
             PRAAS
Sbjct  5     PRAAS  9


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  2715  CLSSSIFVL  2689
             CLS   F L
Sbjct  21    CLSATFFTL  29


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  213   DDFVIPDISEPGTWK  227


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  811   WLPDSLTT  818


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1032  APTLAA  1037


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1306  GSFQGGF  1312


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  688   TRKKRNVN  695


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  691   KRNVNFQKAINEKLG-------QY  707


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  779   LIDED  783


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  814   DSLTTW  819


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  959   YELNP  963


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152   GSEGSL  135
             GSEG L
Sbjct  1003  GSEGAL  1008


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1114  QETSNW----LLSQ  1123


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1278  TAYALLHL  1285


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  209   SIFQD  213


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  267   TVPGHLDEMQL  277


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  437   NTDGSGQVSIPIII  450


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  516   SHYYY  520


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  692   RNVNF  696


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  745   FLSC  748


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  867   VLYNYLD  873


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1059  VDLI---------QKGYMRIQQFR  1073


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1101  LAQEQVG  1107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1643  RE------DSRAAF  1650


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1745  QEYG  1748


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  44    VHLGVP  49


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  139   NIQGINLL  146


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  451   PQTIS  455


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  521   MILSRGQI  528


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  673   WTLSRKRL  680


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1036  AASRYLDK  1043


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1263  PSDPMPQ  1269


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1367  LEEE  1370


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1441  PDAPLQPVT  1449


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1578  VFYGAP  1583


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  127   SPWLKDSLS  135


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  185   DTIT  188


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  255   EVKIT  259


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  391   LVPGAPFLLQAL  402


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  434   IQQNTD  439


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  561  YHGDHPVAN  569


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  677   RKRL  680


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  807   ILTLW  811


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  878   VSVHV  882


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  896   LAQQVL  901


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1082  WLSRD  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1082  WLSRD  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1093  AFVLK  1097


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1094  FVLKVL  1099


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1166  LAVFQ  1170


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1227  HNNLMAMA  1234


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1254  VSPTPAPRNPS  1264


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1458  RNRRRREAP  1466


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1479  TVCIWRNGK  1487


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1614  RGLQDEDG  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1626  FACYYP  1631


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1674  MRNFLV  1679


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8051  RSLCL  8065
             RS CL
Sbjct  18    RSVCL  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3218  FFALPL  3201
             FF L L
Sbjct  26    FFTLSL  31


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  143   INLLF  147


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  455   SELQLSV  461


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1305  QGSF  1308


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1371  LQFSL  1375


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1588  LLATLC  1593


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1708  HPQYL  1712


>gb|AAC61607.1|  immunoglobulin variable region used by the ITC52 heavy chain 
(subgroup VH5) (anti-cytomeglovirus glycoprotein B (AD-1 epitope)) 
[Homo sapiens]
Length=127


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8658  RQDILDLW  8681
             R+D+LD W
Sbjct  110   REDVLDVW  117


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  154  KGLRD  140
            KGLRD
Sbjct  99   KGLRD  103


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  1715  RE--LQVWG  1735
             RE  L VWG
Sbjct  110   REDVLDVWG  118


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  9081  YWVSLVR  9101
             YW+  VR
Sbjct  32    YWIAWVR  38


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7282  SGAERKK  7302
             SGAE KK
Sbjct  7     SGAEVKK  13


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  8467  QSQVAI  8484
             Q QV I
Sbjct  65    QGQVSI  70


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/9 (44%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6086  EDIISLWDQ  6112
             ED+   W Q
Sbjct  111   EDVLDVWGQ  119


>gb|AAA51855.1|  complement component C4A [Homo sapiens]
Length=1744

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  2830  AARKRQLDC  2856
             AAR  QLDC
Sbjct  720   AARVQQLDC  728


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1199  ALTLTKAPVDLL  1210


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>gb|AAD45899.1|AF158382_1  immunoglobulin heavy chain variable region [Homo sapiens]
Length=103


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/20 (35%), Positives = 7/20 (35%), Gaps = 12/20 (60%)
 Frame = +3

Query  2418  YWM------------WVMHI  2441
             YWM            WV HI
Sbjct  16    YWMHWVRQAPGKGLVWVSHI  35


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  53    TISRDNAKN  61


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  17    WMHWVRQ  23


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  15    SYWMHWV  21


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  6     CAASGF  11


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  1245  LRAE  1256
             LRAE
Sbjct  70    LRAE  73


>ref|NP_857592.1|  chemokine-like factor isoform d [Homo sapiens]
Length=120

 GENE ID: 51192 CKLF | chemokine-like factor [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  8829  WCSLLYWPLL  8800
             W   L+WPLL
Sbjct  73    W---LFWPLL  79


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 6/17 (35%)
 Frame = -3

Query  1241  FI-----EPVYIVSKGF  1206
             FI     EP YIV  GF
Sbjct  36    FIIAQAPEP-YIVITGF  51


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 6/20 (30%)
 Frame = -1

Query  1333  IVLQSGFAFWTNKVSVIQFF  1274
             IV   GF      V VI FF
Sbjct  46    IVI-TGFE-----VTVILFF  59


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  948  WSLLTFA  928
            W LL FA
Sbjct  76   WPLLVFA  82


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 8/9 (88%), Gaps = 0/9 (0%)
 Frame = -1

Query  4549  FYVTIILYY  4523
             F VT+IL++
Sbjct  51    FEVTVILFF  59


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4792  YVVIT  4778
             Y+VIT
Sbjct  45    YIVIT  49


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  7281  LLFALV  7264
             L FALV
Sbjct  79    LVFALV  84


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +1

Query  6235  KLLFQ----YQHK  6261
             KLLF     YQ K
Sbjct  99    KLLFNPSGPYQKK  111


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  6990  LFDPS  6976
             LF+PS
Sbjct  101   LFNPS  105


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  1150  LFNP  1139
             LFNP
Sbjct  101   LFNP  104


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5695  YRKIL  5709
             YRK L
Sbjct  97    YRKLL  101


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2397  FNPAG  2383
             FNP G
Sbjct  102   FNPSG  106


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6288  MHFFI  6302
             M FFI
Sbjct  33    MTFFI  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  8833  KLVFSP  8816
             KL F P
Sbjct  99    KLLFNP  104


>gb|ABB01006.1|  heat shock protein 60 [Homo sapiens]
Length=575

 GENE ID: 3329 HSPD1 | heat shock 60kDa protein 1 (chaperonin) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  3298  VDRVLASHL  3324
             V RVLA HL
Sbjct  14    VSRVLAPHL  22


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/18 (50%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
 Frame = +2

Query  3836  AMASDF-NLPPVVAKEIV  3886
             AMA DF N+   V K I+
Sbjct  507   AMAGDFVNM---VEKGII  521


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  8213  LNATAIAVAEG  8245
             LNAT  AV EG
Sbjct  427   LNATRAAVEEG  437


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  3653  QIIEQL  3670
             +IIEQL
Sbjct  375   EIIEQL  380


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 3/15 (20%)
 Frame = -1

Query  6193  IGISII---LQISAL  6158
             IGI II   L I A+
Sbjct  465   IGIEIIKRTLKIPAM  479


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  4945  IAESEKQSK  4919
             IAE  KQSK
Sbjct  152   IAELKKQSK  160


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +1

Query  751  RGKWYIRPY  777
            RG  YI PY
Sbjct  223  RG--YISPY  229


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  2742  VVSPHLNR  2719
             V  PHL R
Sbjct  17    VLAPHLTR  24


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3071  IAEIQKQ  3091
             IAE  KQ
Sbjct  152   IAELKKQ  158


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3894  QLATIS  3877
             Q ATIS
Sbjct  170   QVATIS  175


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +1

Query  7633  DLESHDLDGVGQ  7668
             D + HDL  VG+
Sbjct  338   DVQPHDLGKVGE  349


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = -2

Query  2118  TV--SIGLMGKFK  2086
             TV  SI L  K+K
Sbjct  79    TVAKSIDLKDKYK  91


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/21 (42%), Positives = 10/21 (47%), Gaps = 5/21 (23%)
 Frame = -1

Query  1063  RVLVVPAMSLPL-----GSLI  1016
             R L +PAM         GSLI
Sbjct  472   RTLKIPAMTIAKNAGVEGSLI  492


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  8650  PKEDK  8664
             PKE+K
Sbjct  552   PKEEK  556


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  4604  LPSVF  4590
             LP VF
Sbjct  4     LPTVF  8


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -2

Query  3855  LKSLAIA  3835
             LK +AIA
Sbjct  315   LKDMAIA  321


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  951  NEEA  962
            NEEA
Sbjct  106  NEEA  109


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  376  IDGKKF  393
            I+G KF
Sbjct  216  IEGMKF  221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7025  RIKQII  7042
             RI +II
Sbjct  372   RIQEII  377


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5419  LDASRALV  5396
             L+A RA V
Sbjct  427   LNATRAAV  434


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1992  KSVDIK  2009
             KS+D K
Sbjct  82    KSIDLK  87


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7664  DREINN  7681
             D EI N
Sbjct  179   DKEIGN  184


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4539  LLSCI  4525
             LL CI
Sbjct  446   LLRCI  450


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  3111  IKFIKSHLKI  3140
             I  IK  LKI
Sbjct  467   IEIIKRTLKI  476


>gb|AAY57161.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=120


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57166.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=123


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3047  YYDPS  3061
             YYD S
Sbjct  107   YYDSS  111


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = -1

Query  6628  YYY  6620
             YYY
Sbjct  113   YYY  115


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57159.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=124


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57162.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=119


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57175.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=113


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  7102  SNLSTD  7085
             S+LSTD
Sbjct  102   SDLSTD  107


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  5909  EATTTLFCASD  5941
             E T   +CASD
Sbjct  89    EDTAVYYCASD  99


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4785  TTYWG  4799
             T YWG
Sbjct  106   TDYWG  110


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57163.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=117


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57127.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=118


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  4828  WVRESP*NGGK  4860
             WVRE P   GK
Sbjct  36    WVREAP---GK  43


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2439  YASPTSSTV  2413
             Y SP SST+
Sbjct  50    YISPSSSTI  58


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  431  TYSM  442
            TYSM
Sbjct  31   TYSM  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNGKN  77


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2136  GFNFT  2122
             GF FT
Sbjct  26    GFTFT  30


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 4/10 (40%)
 Frame = +3

Query  8874  REV----LEW  8891
             RE     LEW
Sbjct  38    REAPGKGLEW  47


>gb|AAY57158.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=134


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AA---AFCLYWVSLVR  9101
             LR SC  AA   AF  YW S VR
Sbjct  31    LRLSC--AASGFAFGSYWMSWVR  51


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  82    TISRDNAKN  90


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  6422  CAPAGFA  6442
             CA  GFA
Sbjct  35    CAASGFA  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  46    WMSWVRQ  52


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  9166  SFIEA  9152
             SFI+A
Sbjct  120   SFIDA  124


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  81   SFIEA  67
            SFI+A
Sbjct  120  SFIDA  124


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  44    SYWMSWV  50


>gb|AAY57164.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=122


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSRYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = -1

Query  6649  FY--RCVQLYYY---GFS  6611
             +Y  RC  L YY   G+S
Sbjct  94    YYCARCARLIYYDSSGYS  111


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSMKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  3044  VYYDPS  3061
             +YYD S
Sbjct  103   IYYDSS  108


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2812  DSTAYSA  2832
             DS  YSA
Sbjct  106   DSSGYSA  112


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  4352  GYSAG  4366
             GYSAG
Sbjct  109   GYSAG  113


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E  YVD
Sbjct  55    GSEKHYVD  62


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57121.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=123


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  4828  WVRESP*NGGK  4860
             WVRE P   GK
Sbjct  36    WVREAP---GK  43


 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  1058  YPSGTNRMD  1084
             Y SG +RMD
Sbjct  109   YSSGPDRMD  117


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  2439  YASPTSSTV  2413
             Y SP SST+
Sbjct  50    YISPSSSTI  58


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 1/11 (9%)
 Frame = -1

Query  4915  YR*ISWSASSG  4883
             YR + WS SSG
Sbjct  103   YR-VRWSYSSG  112


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  431  TYSM  442
            TYSM
Sbjct  31   TYSM  34


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNGKN  77


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8311  YSSRY  8297
             Y SRY
Sbjct  95    YCSRY  99


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2136  GFNFT  2122
             GF FT
Sbjct  26    GFTFT  30


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 4/10 (40%)
 Frame = +3

Query  8874  REV----LEW  8891
             RE     LEW
Sbjct  38    REAPGKGLEW  47


>gb|AAY57064.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=117


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57060.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=122


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY57062.1|  immunoglobulin heavy chain variable region [Homo sapiens]
Length=121


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect(2) =  8305
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNSKNSLYLQMNSLRAE  89


 Score = 17.2 bits (33),  Expect(2) =  8305
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  1286  DRNLVGP  1306
             DR L GP
Sbjct  104   DRELLGP  110


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R   KN
Sbjct  69    TISRDNSKN  77


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6730  YCNKC  6716
             YC KC
Sbjct  95    YCAKC  99


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1767  PIDKEL  1784
             P+D EL
Sbjct  102   PVDREL  107


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  7196  RDNWRSELY  7222
             RDN    LY
Sbjct  72    RDNSKNSLY  80


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAY33424.1|  anti-rabies virus immunoglobulin light chain variable region 
[Homo sapiens]
Length=106


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 9/17 (52%), Positives = 9/17 (52%), Gaps = 4/17 (23%)
 Frame = +1

Query  3070  NSRNTE----AGARPMD  3108
             NS NT      G RPMD
Sbjct  65    NSGNTATLTISGTRPMD  81


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +2

Query  2615  QNPDIVIYQ  2641
             Q P +VIYQ
Sbjct  41    QSPVVVIYQ  49


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8900  QPPSIS  8917
             QPPS+S
Sbjct  6     QPPSVS  11


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 5/18 (27%)
 Frame = -1

Query  5488  NKLGNESNTFYNSNWYKQ  5435
             +KLG+     Y S WY Q
Sbjct  25    DKLGDK----YAS-WYQQ  37


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -1

Query  505  QPSDVSNRPGLTA  467
            QP  VS  PG TA
Sbjct  6    QPPSVSVSPGQTA  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +1

Query  5272  SGSHNKNSAT  5301
             SGS   N AT
Sbjct  62    SGSNSGNTAT  71


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  6885  TISGSPPED  6859
             TISG  P D
Sbjct  73    TISGTRPMD  81


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  3835  SPITVIF  3815
             SP+ VI+
Sbjct  42    SPVVVIY  48


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  1064  SGTNRMDD  1087
             SGT  MD+
Sbjct  75    SGTRPMDE  82


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = +2

Query  2546  QGWKGSPAIF  2575
             Q W  S  IF
Sbjct  88    QAWDSSTVIF  97


>gb|AAY33292.1|  anti-rabies virus immunoglobulin heavy chain variable region 
[Homo sapiens]
Length=119


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/23 (52%), Positives = 12/23 (52%), Gaps = 6/23 (26%)
 Frame = +3

Query  9045  LR-SCI*AAA---FCLYWVSLVR  9101
             LR SC  AA    F  YW S VR
Sbjct  18    LRLSC--AASGFTFSSYWMSWVR  38


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  3193  TINRGSAKN  3219
             TI R  AKN
Sbjct  69    TISRDNAKN  77


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4987  NIKQD  5001
             NIKQD
Sbjct  50    NIKQD  54


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  3401  GAETFYVD  3424
             G E +YVD
Sbjct  55    GSEKYYVD  62


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 18/30 (60%)
 Frame = +3

Query  1221  YVD----RF-----------Y---KTLRAE  1256
             YVD    RF           Y     LRAE
Sbjct  60    YVDSVKGRFTISRDNAKNSLYLQMNSLRAE  89


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  7652  WMEWDRE  7672
             WM W R+
Sbjct  33    WMSWVRQ  39


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 3/6 (50%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1121  INFSYW  1104
             ++F YW
Sbjct  104   VDFDYW  109


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  3800  QDEHEKY  3820
             QD  EKY
Sbjct  53    QDGSEKY  59


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  1112  SYWDRWI  1092
             SYW  W+
Sbjct  31    SYWMSWV  37


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6422  CAPAGF  6439
             CA  GF
Sbjct  22    CAASGF  27


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  929  ANVKRD  946
            AN+K D
Sbjct  49   ANIKQD  54


>gb|AAW65983.1|  HECTD1 [Homo sapiens]
Length=1224

 GENE ID: 25831 HECTD1 | HECT domain containing 1 [Homo sapiens]
(10 or fewer PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5690  MITMD  5676
             MITMD
Sbjct  1050  MITMD  1054


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 4/12 (33%)
 Frame = +2

Query  5144  PHNEWTLELLEE  5179
             PH E    LLEE
Sbjct  415   PHSE----LLEE  422


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -1

Query  1831  DEGSLPKSDL  1802
             DE  LPK DL
Sbjct  520   DE--LPKNDL  527


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  4049  ETGQETAY----FL  4078
             +TGQE  Y    FL
Sbjct  265   DTGQEAEYSLYDFL  278


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 10/22 (45%), Positives = 11/22 (50%), Gaps = 1/22 (4%)
 Frame = +2

Query  1655  LQGKAREFSSEQTRANSPTRRE  1720
             LQ   RE   E TR  S  RR+
Sbjct  712   LQNR-REATVERTRTTSSVRRD  732


 Score = 18.5 bits (36),  Expect(2) =  3308
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  3317  LANTLST  3297
             L NTL T
Sbjct  249   LSNTLTT  255


 Score = 17.2 bits (33),  Expect(2) =  3308
 Identities = 9/21 (42%), Positives = 9/21 (42%), Gaps = 6/21 (28%)
 Frame = -2

Query  3456  FPNLVSLLAAPST*KVSAPTM  3394
             FPN    L  P T   S  TM
Sbjct  211   FPN----LTTPGT--TSTVTM  225


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4660  TKLFH  4646
             TKLFH
Sbjct  856   TKLFH  860


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2751  KNIRKN  2768
             K IRKN
Sbjct  550   KSIRKN  555


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  4222  SSRIY  4236
             SSRIY
Sbjct  1031  SSRIY  1035


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 0/13 (0%)
 Frame = -2

Query  6615  LALSVKLTDLITT  6577
             LAL  K T L TT
Sbjct  431   LALTLKVTGLGTT  443


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2305  MEKISRF  2325
             MEK S F
Sbjct  1089  MEKLSSF  1095


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +3

Query  8517  EAQEEEEV  8540
             E QE EEV
Sbjct  312   EDQEYEEV  319


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3448  IRKSRIC  3468
             IRK R C
Sbjct  552   IRKNRNC  558


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 11/29 (37%)
 Frame = -3

Query  9002  KVPSGKSLV----------ASSMSAVLEV  8946
             KVP G SL           A   S VLEV
Sbjct  748   KVPRGESLMEWAENVMQIHADRKS-VLEV  775


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -3

Query  8033  VPRIRSLIEW  8004
             VPR  SL EW
Sbjct  749   VPRGESLMEW  758


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 7/22 (31%)
 Frame = -1

Query  982  CTLSHSAAS------SLMV-SF  938
            CT S+S AS      SL V SF
Sbjct  912  CTESQSEASTEEGHDSLSVGSF  933


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  4046  AETGQETA  4069
             AETG E A
Sbjct  68    AETGSENA  75


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2427  TSSTVT  2410
             T STVT
Sbjct  219   TTSTVT  224


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5023  CRDPTLL  5003
             CR  TLL
Sbjct  281   CRASTLL  287


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  463  RSSSLLA  443
            R S LLA
Sbjct  282  RASTLLA  288


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = +3

Query  3240  YGERLLNLNC  3269
             Y + LL L C
Sbjct  460   YVQKLLQLSC  469


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  3877  RNSSQL  3894
             RN SQL
Sbjct  556   RNCSQL  561


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  3527  QSSDLL  3510
             QSSD L
Sbjct  586   QSSDIL  591


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -3

Query  1934  FLVSIFLA  1911
             FL  IFLA
Sbjct  861   FL-GIFLA  867


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  1552  LQFLAVCPSLP  1520
             LQF   C  LP
Sbjct  1153  LQFTTGCSTLP  1163


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = +1

Query  1474  EAILGTKERLL  1506
             E I+   ERLL
Sbjct  1205  EEIM--RERLL  1213


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5366  PLSSNA  5349
             PLSS A
Sbjct  122   PLSSSA  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -2

Query  9123  ELPGSDLV  9100
             ELP  DL+
Sbjct  521   ELPKNDLI  528


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  38   ELPGSDLV  15
            ELP  DL+
Sbjct  521  ELPKNDLI  528


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1914  QEDGNQ  1931
             QEDG++
Sbjct  634   QEDGDE  639


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  4513  FTFP  4502
             FTFP
Sbjct  643   FTFP  646


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  9064  QLLFACT  9084
             QL F CT
Sbjct  695   QLYFTCT  701


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1780  SLSIGS  1763
             SLS+GS
Sbjct  927   SLSVGS  932


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  7092  PLMG  7081
             PLMG
Sbjct  204   PLMG  207


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3585  VTMFTS  3568
             VTM TS
Sbjct  223   VTMSTS  228


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  8413  SARLILSLTV  8384
             S RL L L V
Sbjct  428   SPRLALTLKV  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8105  TRIVEL  8122
             TR VEL
Sbjct  443   TREVEL  448


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             LI YL
Sbjct  527   LITYL  531


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  2892  QFNFP  2878
             QF FP
Sbjct  642   QFTFP  646


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1032  PLVLSSG  1012
             PL L SG
Sbjct  666   PLALASG  672


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5413  ASRALV  5396
             ASRA V
Sbjct  705   ASRAIV  710


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = +1

Query  4453  LQGQQKSTLERT  4488
             LQ     T ERT
Sbjct  712   LQNRREATVERT  723


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  759   FAPGCSAL  736
             F  GCS L
Sbjct  1155  FTTGCSTL  1162


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 8/20 (40%), Positives = 8/20 (40%), Gaps = 11/20 (55%)
 Frame = -1

Query  8902  LSNLHSNTSLSGSSIPCRLT  8843
             L NLH          P RLT
Sbjct  1167  LANLH----------P-RLT  1175


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  174  SSSGARTGT  200
            SSS A T T
Sbjct  57   SSSSASTST  65


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 0/13 (0%)
 Frame = -2

Query  5946  LASDAQNRVVVAS  5908
             L S A NR  V S
Sbjct  123   LSSSASNRLSVSS  135


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  3532  TSNLSSF  3552
             TS L SF
Sbjct  157   TSSLESF  163


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/11 (54%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +2

Query  3056  PSKDLIAEIQK  3088
             P  DLI   QK
Sbjct  523   PKNDLITYLQK  533


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 3/13 (23%)
 Frame = -1

Query  508  LQPSDVSNRPGLT  470
            LQ SD+ N   LT
Sbjct  585  LQSSDILN---LT  594


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  5291  ILQQ  5302
             ILQQ
Sbjct  659   ILQQ  662


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5212  DLAPWL  5229
             DL  WL
Sbjct  803   DLGAWL  808


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  5365  GEQEM  5379
             GE EM
Sbjct  1046  GEDEM  1050


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1872  IQEQM  1886
             IQ QM
Sbjct  1072  IQKQM  1076


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  1673  EFSSEQ  1690
             E+SSE+
Sbjct  1201  EYSSEE  1206


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  3705  QHTKELE  3725
             Q+T +LE
Sbjct  402   QQTTDLE  408


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  518  QYLST  504
            QYL T
Sbjct  515  QYLGT  519


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  145  SDPFS  159
            SDP+S
Sbjct  626  SDPYS  630


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  5190  KL---LDIFL  5210
             KL   L IFL
Sbjct  857   KLFHFLGIFL  866


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7031  LFCMG  7017
             L CMG
Sbjct  887   LMCMG  891


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5573  KLLYQS  5590
             KL Y+S
Sbjct  899   KLIYES  904


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1611  CTERQ  1625
             CTE Q
Sbjct  912   CTESQ  916


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 7/12 (58%), Gaps = 0/12 (0%)
 Frame = +2

Query  6542  QLLLNGSLAEEE  6577
             Q L N  L E+E
Sbjct  986   QILSNKGLSEDE  997


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 4/7 (57%), Gaps = 0/7 (0%)
 Frame = +2

Query  2846  SWTVNDI  2866
             SW   DI
Sbjct  1111  SWAAEDI  1117


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  1887  SSAPVSN  1867
             SSA V N
Sbjct  145   SSASVPN  151


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6179  DTNTN  6193
             D NTN
Sbjct  187   DNNTN  191


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5534  DSDEEL  5551
             D DE+L
Sbjct  291   DDDEDL  296


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1917  EDGNQ  1931
             ED NQ
Sbjct  307   EDDNQ  311


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  5333  TPNSE  5319
             TP SE
Sbjct  414   TPHSE  418


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  6349  QLIA  6338
             QLIA
Sbjct  560   QLIA  563


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2693  TKIEEL  2710
             TK +EL
Sbjct  1000  TKLQEL  1005


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5817  LHPHL  5803
             LHP L
Sbjct  1170  LHPRL  1174


>ref|NP_116759.2|  caspase-10 isoform d preproprotein [Homo sapiens]
Length=522

 GENE ID: 843 CASP10 | caspase 10, apoptosis-related cysteine peptidase
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/18 (44%), Positives = 9/18 (50%), Gaps = 9/18 (50%)
 Frame = +2

Query  2210  TEM---------EKEGKI  2236
             TEM         EK+GKI
Sbjct  145   TEMTSLSFLAFLEKQGKI  162


 Score = 21.8 bits (44),  Expect =   981
 Identities = 7/10 (70%), Positives = 8/10 (80%), Gaps = 1/10 (10%)
 Frame = -3

Query  3725  LQFLCV-LVP  3699
             L FLC+ LVP
Sbjct  39    LKFLCIGLVP  48


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 11/28 (39%)
 Frame = +2

Query  2378  PHPA-GLKKKKSVTVLDVGDAYFSVPLD  2458
             P+PA  L KK     L V    F VPLD
Sbjct  501   PQPAFTLRKK-----L-V----FPVPLD  518


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  3629  QSESELVNQ  3655
             Q E ELV Q
Sbjct  209   QGEEELVSQ  217


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +1

Query  6226  RDKKLLFQYQH  6258
             R KKLL   QH
Sbjct  87    RQKKLL---QH  94


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6083  HEDIIS  6100
             HEDI S
Sbjct  473   HEDILS  478


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1570  PFFLGAL  1550
             PFFL  L
Sbjct  76    PFFLAEL  82


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 9/22 (40%), Positives = 10/22 (45%), Gaps = 6/22 (27%)
 Frame = -3

Query  2390  LRDVVFLI--ELPR----SLEF  2343
             L D +FL    LP     SL F
Sbjct  131   LKDMIFLLKDSLPKTEMTSLSF  152


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 7/16 (43%)
 Frame = +3

Query  6339  AIS*QVVTPQSLHRPV  6386
             AI  Q+VTP     PV
Sbjct  193   AI--QIVTP-----PV  201


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  2771  EVLSDVF  2751
             E+LS VF
Sbjct  308   EILSHVF  314


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5537  SDEELI  5554
             SDE LI
Sbjct  367   SDEALI  372


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7433  LLRAIE  7450
             LLR IE
Sbjct  181   LLRNIE  186


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1667  PSLVGR  1650
             PSLV R
Sbjct  249   PSLVSR  254


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2555  SIPVEA  2538
             SIP EA
Sbjct  429   SIPAEA  434


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  754  GKWYI  768
            G WYI
Sbjct  455  GSWYI  459


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +2

Query  6872  DPEIVTHSF  6898
             D EI  H F
Sbjct  306   DAEILSHVF  314


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/20 (45%), Positives = 9/20 (45%), Gaps = 9/20 (45%)
 Frame = +1

Query  187  PEQGPESERETRGALSTQDS  246
            PEQ P S       L  QDS
Sbjct  419  PEQAPTS-------L--QDS  429


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  1432  ASAKTL  1415
             ASA TL
Sbjct  259   ASANTL  264


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4670  YVCFR  4684
             YV FR
Sbjct  446   YVSFR  450


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  7520  PQPGF  7506
             PQP F
Sbjct  501   PQPAF  505


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3196  LFYII  3182
             L YII
Sbjct  82    LLYII  86


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5704  ILRQRK  5721
             I RQ K
Sbjct  85    IIRQKK  90


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  8642  NSLPK  8656
             +SLPK
Sbjct  140   DSLPK  144


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8796  KIEEAN  8813
             KI+E N
Sbjct  161   KIDEDN  166


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 3/10 (30%)
 Frame = +3

Query  8517  EA---QEEEE  8537
             EA   Q EEE
Sbjct  204   EAESYQGEEE  213


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  5670  CVVHSNH  5690
             CV+  NH
Sbjct  286   CVIVNNH  292


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  6364  LSHYTGL  6384
             +SH+T L
Sbjct  378   MSHFTAL  384


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  8833  KLVF  8822
             KLVF
Sbjct  510   KLVF  513


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -3

Query  770  LMYHLPLDVL  741
            L +  PLD L
Sbjct  511  LVFPVPLDAL  520


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  2773  IPLDGL  2790
             +PLD L
Sbjct  515   VPLDAL  520


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  4673  VCFRE  4687
             V FRE
Sbjct  18    VSFRE  22


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6569  EEEVV  6583
             EEE V
Sbjct  211   EEELV  215


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5856  VLQK  5867
             VLQK
Sbjct  335   VLQK  338


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  1615  LRDRLIF  1635
             LR  L+F
Sbjct  507   LRKKLVF  513


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4811  RKRLAF  4828
             RK L F
Sbjct  508   RKKLVF  513


>gb|AAZ80417.1|  mitochondrial anti-viral signaling protein [Homo sapiens]
Length=540

 GENE ID: 57506 MAVS | mitochondrial antiviral signaling protein [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1405  PGPPTP  1388
             PGPPTP
Sbjct  117   PGPPTP  122


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +2

Query  14   RPDLSLGALWL  46
            RP  S GALWL
Sbjct  510  RP--SPGALWL  518


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +3

Query  9099  RPDLSLGALWL  9131
             RP  S GALWL
Sbjct  510   RP--SPGALWL  518


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = -3

Query  2903  SDLPNSISPLTS  2868
             SDL    SPLTS
Sbjct  182   SDLA-ALSPLTS  192


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  5025  IVEILP  5008
             +VEILP
Sbjct  24    VVEILP  29


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +1

Query  3307  VLASHLDS  3330
             VLAS+ DS
Sbjct  423   VLASQVDS  430


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2265  ILQYLP  2282
             IL YLP
Sbjct  27    ILPYLP  32


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/15 (46%), Positives = 10/15 (66%), Gaps = 0/15 (0%)
 Frame = -3

Query  3833  SNYCDISHVHLGPYL  3789
             SN+C++  V   PYL
Sbjct  17    SNFCNVDVVEILPYL  31


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7921  SDPPPNP  7941
             SD PP+P
Sbjct  100   SDRPPDP  106


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  135  SYQSHTTD  112
            SYQ  T D
Sbjct  94   SYQPRTSD  101


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/22 (36%), Positives = 9/22 (40%), Gaps = 13/22 (59%)
 Frame = +3

Query  7155  TMSPR-------------SSDL  7181
             T+SPR             SSDL
Sbjct  163   TLSPRAIPRNPDGGPLESSSDL  184


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4196  IPYN  4207
             IPYN
Sbjct  128   IPYN  131


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = +2

Query  725  KLPYSAEHPGA  757
            KLP S   PGA
Sbjct  325  KLPTSSKPPGA  335


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 7/14 (50%), Positives = 8/14 (57%), Gaps = 4/14 (28%)
 Frame = +2

Query  2486  TIP----SINNETP  2515
             T+P    S N ETP
Sbjct  376   TVPTDGSSRNEETP  389


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  9085  GSLWL  9099
             G LWL
Sbjct  514   GALWL  518


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  4716  YESPHPRIS  4742
             YES +PR S
Sbjct  92    YESYQPRTS  100


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/16 (56%), Positives = 9/16 (56%), Gaps = 0/16 (0%)
 Frame = -2

Query  1902  SSNTVSSAPVSNRASF  1855
             SS T S  PVS   SF
Sbjct  212   SSLTPSRGPVSPSVSF  227


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7851  PTKPPTIIM  7825
             P K PT  M
Sbjct  295   PSKVPTTLM  303


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  7556  KSPGAV  7539
             K PGAV
Sbjct  331   KPPGAV  336


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7927  PPPNPEG  7947
             PP +P+G
Sbjct  485   PPADPDG  491


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  1779  PCLSA  1765
             PCL A
Sbjct  32    PCLTA  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  7775  LWNWFN  7792
             LW  FN
Sbjct  55    LWHLFN  60


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  1044  AGTTSTL  1064
             AG TS L
Sbjct  208   AGATSSL  214


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = -2

Query  7008  VSLPSVLFDP  6979
             VS PSV F P
Sbjct  221   VS-PSVSFQP  229


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7390  LYRQR  7376
             LYR R
Sbjct  534   LYRRR  538


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  5346  FCYVD  5332
             FC VD
Sbjct  19    FCNVD  23


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 8/13 (61%), Gaps = 2/13 (15%)
 Frame = +1

Query  178  AVAPE--QGPESE  210
            A A E  QG ES+
Sbjct  264  AGAAEGKQGAESD  276


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2570  LLVIL  2556
             LLV+L
Sbjct  530   LLVVL  534


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4357  VPPNP  4343
             VP NP
Sbjct  312   VPANP  316


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  4490  LVLSKV  4473
             +VL KV
Sbjct  367   MVLTKV  372


>ref|NP_758525.1|  interleukin-25 isoform 2 precursor [Homo sapiens]
Length=161

 GENE ID: 64806 IL25 | interleukin 25 [Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 8/13 (61%), Positives = 8/13 (61%), Gaps = 4/13 (30%)
 Frame = +3

Query  9078  LYWVSL----VRP  9104
             LY VSL    VRP
Sbjct  145   LYRVSLACVCVRP  157


 Score = 21.8 bits (44),  Expect =   981
 Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 11/25 (44%)
 Frame = +3

Query  534  SLQTGS-------EELRSLYN--TV  581
            SLQTGS        EL  LY   TV
Sbjct  101  SLQTGSHMDPRGNSEL--LYHNQTV  123


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  3111  YVHWP--CP  3091
             Y HWP  CP
Sbjct  17    YSHWPSCCP  25


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3564  PESCKA  3547
             PESC A
Sbjct  55    PESCRA  60


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 2/12 (16%)
 Frame = +2

Query  5534  DSDEELIR--TV  5563
             D  EEL R  TV
Sbjct  30    DTSEELLRWSTV  41


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  4102  WPSSC  4088
             WPS C
Sbjct  20    WPSCC  24


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 8/10 (80%), Gaps = 2/10 (20%)
 Frame = +3

Query  8814  KGENTS--LL  8837
             KG++TS  LL
Sbjct  27    KGQDTSEELL  36


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  6140  PLCVSL  6157
             P CVSL
Sbjct  97    PHCVSL  102


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  8634  PVPP  8623
             PVPP
Sbjct  42    PVPP  45


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  771  AISP------RTLN  794
            AISP      R LN
Sbjct  70   AISPWRYELDRDLN  83


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/17 (52%), Positives = 10/17 (58%), Gaps = 3/17 (17%)
 Frame = +2

Query  2306  WR-KLVDFRELNKRTQD  2353
             WR  L D R+LN   QD
Sbjct  74    WRYEL-D-RDLNRLPQD  88


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +1

Query  1552  GPLGKRAV  1575
             GPL  RA+
Sbjct  64    GPLNSRAI  71


>sp|Q92619.2|HMHA1_HUMAN  RecName: Full=Minor histocompatibility protein HA-1; Contains: 
RecName: Full=Minor histocompatibility antigen HA-1; Short=mHag 
HA-1
Length=1136

 GENE ID: 23526 HMHA1 | histocompatibility (minor) HA-1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -1

Query  7612  PTSIPRHSSGA  7580
             PTS  RH S A
Sbjct  65    PTSLSRHASAA  75


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  8271  KELVEL  8288
             KELVEL
Sbjct  816   KELVEL  821


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 5/8 (62%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -3

Query  611  YPLMHTIE  588
            YPL+ T+E
Sbjct  168  YPLLNTVE  175


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 9/13 (69%), Positives = 9/13 (69%), Gaps = 2/13 (15%)
 Frame = -3

Query  9062  LYA-GSEGSPLPS  9027
             LY  GSEG P PS
Sbjct  246   LYGPGSEGTP-PS  257


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 1/11 (9%)
 Frame = +3

Query  1689  RPEPT-APPEE  1718
             RPE    PPEE
Sbjct  586   RPEAAGSPPEE  596


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = +1

Query  5122  RPRATEGAT  5148
             RPR TE AT
Sbjct  940   RPRPTE-AT  947


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  5827  GAPSPPPS  5804
             G PSP PS
Sbjct  22    GSPSPQPS  29


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  5119  RRPRATE  5139
             RRPRA E
Sbjct  146   RRPRAHE  152


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8078  RLRDLL  8095
             RLR+LL
Sbjct  890   RLRELL  895


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4279  LISYL  4265
             LISYL
Sbjct  299   LISYL  303


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  6876  GSPPED  6859
             GSPPE+
Sbjct  591   GSPPEE  596


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  3804  SWALSI  3787
             SW LSI
Sbjct  619   SWPLSI  624


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  1323  NLGSHFGPT  1297
             NLG  FGPT
Sbjct  929   NLGIVFGPT  937


 Score = 18.9 bits (37),  Expect(2) =  7367
 Identities = 10/30 (33%), Positives = 10/30 (33%), Gaps = 17/30 (56%)
 Frame = -1

Query  295   THQS--------PP---------LASCRAR  257
             T QS        PP         L SCR R
Sbjct  1102  TNQSNNVLQAPLPPMRLRGGRMTLGSCRER  1131


 Score = 15.1 bits (28),  Expect(2) =  7367
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  242   SCVERAP  222
             SC ER P
Sbjct  1127  SCRERQP  1133


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  2127  FTGTVSIGLMG  2095
             F  TVS  LMG
Sbjct  214   FSSTVSEFLMG  224


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 13/47 (27%), Positives = 14/47 (29%), Gaps = 31/47 (65%)
 Frame = +3

Query  5859  LQK---NCGSQSIMGYLCGRKQPPLYFVHQMLKHMIQRYIMFGPHMP  5990
             LQK   NC  QS+M                      Q      PHMP
Sbjct  317   LQKIAHNC-RQSVM----------------------Q-----EPHMP  335


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  7173  SDLEE  7187
             SDLEE
Sbjct  1032  SDLEE  1036


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 10/22 (45%), Positives = 10/22 (45%), Gaps = 9/22 (40%)
 Frame = +3

Query  552  EELR------SLY---NTVATL  590
            E LR      S Y   NTV TL
Sbjct  156  EALRVMHQIISKYPLLNTVETL  177


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/11 (63%), Positives = 7/11 (63%), Gaps = 2/11 (18%)
 Frame = -1

Query  8431  TLSAAGSARLI  8399
             TL AAG   LI
Sbjct  176   TLTAAGT--LI  184


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 12/33 (36%)
 Frame = -3

Query  2438  MHHPHPVLLLIFSFLTL-RDVVFLIELPRSLEF  2343
             M+ PH  LL I+S L L  D          LEF
Sbjct  329   MQEPHMPLLSIYS-LALEQD----------LEF  350


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -3

Query  257  LQQAES  240
            LQ+AES
Sbjct  395  LQEAES  400


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  8559  QVPLRPM  8579
             Q PL PM
Sbjct  1110  QAPLPPM  1116


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  316  RRLEGE  333
            RRLE E
Sbjct  449  RRLEEE  454


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6964  TIKPSTI  6944
             TIK  TI
Sbjct  501   TIKSATI  507


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  9033  EWRALR  9050
             E RALR
Sbjct  786   ERRALR  791


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  5328  GCRHSRI  5348
             GCR SR+
Sbjct  1019  GCRESRV  1025


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  1834  CDEGSLP  1814
             CD G LP
Sbjct  261   CDAGCLP  267


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -2

Query  4800  DPNMLLLPI  4774
             +P M LL I
Sbjct  331   EPHMPLLSI  339


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  2544  HRDGKDHQ  2567
             HR G  HQ
Sbjct  608   HRAGRGHQ  615


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  8954  ELLTSS  8971
             ELL SS
Sbjct  1039  ELLSSS  1044


 Score = 15.9 bits (30),  Expect(2) = 21455
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4717  MKALI  4731
             MK LI
Sbjct  296   MKDLI  300


 Score = 15.5 bits (29),  Expect(2) = 21455
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4586  YGKQMA  4603
             Y K MA
Sbjct  288   YAKNMA  293


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  9061  YMQDL  9047
             YM DL
Sbjct  295   YMKDL  299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2050  YVDRC  2036
             YV RC
Sbjct  409   YVQRC  413


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 0/12 (0%)
 Frame = +2

Query  1733  GRDNNSPSEAGA  1768
             GR + S SEA A
Sbjct  873   GRQDGSESEAVA  884


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1611  CTERQANF  1634
             C ERQ  F
Sbjct  1128  CRERQPEF  1135


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5300  VAEFLL  5283
             V EFL+
Sbjct  218   VSEFLM  223


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  460  SSSLLA  443
            SS LLA
Sbjct  228  SSTLLA  233


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 4/10 (40%)
 Frame = +3

Query  5709  KT----KKNR  5726
             KT    KKNR
Sbjct  11    KTPSISKKNR  20


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/15 (46%), Positives = 9/15 (60%), Gaps = 4/15 (26%)
 Frame = +3

Query  6684  KESVSREDQGEHLLQ  6728
             KE V R+D    LL+
Sbjct  134   KECVLRDD----LLE  144


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  1520  TIETL  1506
             T+ETL
Sbjct  173   TVETL  177


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/10 (40%), Positives = 5/10 (50%), Gaps = 0/10 (0%)
 Frame = -1

Query  874  VAPSDNAENM  845
            V P D  + M
Sbjct  234  VPPGDSSQSM  243


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2693  TKIEELRQ  2716
             TK+  LRQ
Sbjct  483   TKVTALRQ  490


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6242  SFNIS  6256
             SFN+S
Sbjct  578   SFNVS  582


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  2508  RHQGL  2522
             RH+GL
Sbjct  692   RHEGL  696


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8232  AMAVAL  8215
             A AVAL
Sbjct  882   AVAVAL  887


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8252  RVIE  8263
             RVIE
Sbjct  961   RVIE  964


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8201  HYSLV  8187
             HY LV
Sbjct  969   HYGLV  973


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  7581  QMSFPEQPQ  7555
             ++SF EQ Q
Sbjct  1051  HLSFLEQQQ  1059


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/10 (50%), Positives = 5/10 (50%), Gaps = 3/10 (30%)
 Frame = -1

Query  301  W---RTHQSP  281
            W   R H SP
Sbjct  85   WTLGRSHRSP  94


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2901  RFTQGL  2918
             RF +GL
Sbjct  125   RFAEGL  130


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  8873  LRVIH  8859
             LRV H
Sbjct  158   LRVMH  162


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1539  ARNCR  1553
             A NCR
Sbjct  321   AHNCR  325


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2159  KQWPL  2173
             K WPL
Sbjct  618   KSWPL  622


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  3476  RGRQ  3487
             RGRQ
Sbjct  872   RGRQ  875


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5531  GDSDEE  5548
             GD DE+
Sbjct  1086  GDGDED  1091


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  5373  LLSSVE  5356
             LL  VE
Sbjct  170   LLNTVE  175


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  8805  LLSYL  8791
             L SYL
Sbjct  299   LISYL  303


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 3/8 (37%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  6072  TMSFFHML  6049
             T S+++M+
Sbjct  506   TISYYQMM  513


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  4744  QKYTSH  4761
             Q Y SH
Sbjct  538   QQYASH  543


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2596  DFCHA  2582
             DF HA
Sbjct  762   DFSHA  766


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  8928  RELHPE  8945
             R+L PE
Sbjct  896   RDLPPE  901


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  7546  PGDLG  7560
             PG+LG
Sbjct  927   PGNLG  931


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  1290  ETLLVQ  1307
             ETL V+
Sbjct  964   ETLIVH  969


>sp|P0C0L5.1|CO4B_HUMAN  RecName: Full=Complement C4-B; AltName: Full=Basic complement 
C4; AltName: Full=C3 and PZP-like alpha-2-macroglobulin domain-containing 
protein 3; Contains: RecName: Full=Complement 
C4 beta chain; Contains: RecName: Full=Complement C4-B alpha 
chain; Contains: RecName: Full=C4a anaphylatoxin; Contains: 
RecName: Full=C4b-B; Contains: RecName: Full=C4d-B; Contains: 
RecName: Full=Complement C4 gamma chain; Flags: Precursor
Length=1744

 GENE ID: 721 C4B | complement component 4B (Chido blood group) [Homo sapiens]
(Over 100 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1717  LC--RSTRQR  1724


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  311   HISLSKAEFQD---ALEKLNMGI  330


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1248  RNPSDPMPQ  1256


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  25    LFSPSVVHL  33


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  748   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  783


 Score = 18.5 bits (36),  Expect(2) =  2405
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1302  TQDTVI  1307


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  120   SL-SRTTNIQG  129


 Score = 18.0 bits (35),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  150   YNPGQRVRY  158


 Score = 17.6 bits (34),  Expect(2) =  2405
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1296  QGGFRSTQD  1304


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  411   SPGSVPEV  418


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  689   EKLGQYASPT  698


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1469  TVCIWRN-----------------------GKVGLSGM  1483


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  93    DAKSCGLHQ-LLR  104


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  536   HLAPSFYFVA  545


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  635   CGPGGGDSA  643


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1597  RQRRA  1601


 Score = 18.5 bits (36),  Expect(2) =  6281
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1290  TRQ---GSFQGG  1298


 Score = 15.5 bits (29),  Expect(2) =  6281
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1288  WLTR  1291


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1143  AFVTI  1147


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1457  KVVEE  1461


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  213  WKIS---AR  218


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  249   KPYILT  254


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  465   PPSGGP  470


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1087  SLAQEQV  1093


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -2

Query  4155  LTVAPVKLL  4129
             LT APV LL
Sbjct  1202  LTKAPVDLL  1210


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1288  WLTRQ  1292


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1553  SAT--LYDYYNP  1562


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  424   NTDGSGQVSIPIIIPQTI  441


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  849   LELRPVL  855


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  965   DPNM  968


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1029  DKTEQW  1034


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  200   DDFVIPDISEPGTWK  214


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  798   WLPDSLTT  805


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1019  APTLAA  1024


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +3

Query  6456  IIRRSME  6476
             +I RSM+
Sbjct  1123  VIHRSMQ  1129


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1293  GSFQGGF  1299


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  675   TRKKRNVN  682


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  678   KRNVNFQKAINEKLG-------QY  694


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  766   LIDED  770


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  801   DSLTTW  806


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  946   YELNP  950


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152  GSEGSL  135
            GSEG L
Sbjct  990  GSEGAL  995


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1101  QETSNW----LLSQ  1110


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1265  TAYALLHL  1272


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  4     LWGLIWASSFFTLSL  18


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  196   SIFQD  200


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  254   TVPGHLDEMQL  264


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  424   NTDGSGQVSIPIII  437


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  503   SHYYY  507


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  679   RNVNF  683


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  732   FLSC  735


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  854   VLYNYLD  860


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1046  VDLI---------QKGYMRIQQFR  1060


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1088  LAQEQVG  1094


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1633  RE------DSRAAF  1640


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1735  QEYG  1738


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  31    VHLGVP  36


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  126   NIQGINLL  133


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  438   PQTIS  442


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  508   MILSRGQI  515


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  660   WTLSRKRL  667


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1023  AASRYLDK  1030


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1250  PSDPMPQ  1256


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1354  LEEE  1357


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1431  PDAPLQPVT  1439


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1568  VFYGAP  1573


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  114   SPWLKDSLS  122


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  172   DTIT  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  242   EVKIT  246


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  378   LVPGAPFLLQAL  389


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  415   VPEV  418


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  416   PE-----VQDIQ  422


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  421   IQQNTD  426


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  548  YHGDHPVAN  556


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  664   RKRL  667


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  794   ILTLW  798


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  865   VSVHV  869


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  883   LAQQVL  888


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1069  WLSRD  1073


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1080  AFVLK  1084


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1081  FVLKVL  1086


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1153  LAVFQ  1157


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1214  HNNLMAMA  1221


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1241  VSPTPAPRNPS  1251


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1448  RNRRRREAP  1456


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1469  TVCIWRNGK  1477


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1604  RGLQDEDG  1611


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1616  FACYYP  1621


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1664  MRNFLV  1669


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  130   INLLF  134


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  442   SELQLSV  448


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1292  QGSF  1295


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1358  LQFSL  1362


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1578  LLATLC  1583


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1698  HPQYL  1702


>dbj|BAE06071.1|  C4A variant protein [Homo sapiens]
Length=1751

 GENE ID: 720 C4A | complement component 4A (Rodgers blood group) [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  5099  LCQFRNTRQR  5070
             LC  R TRQR
Sbjct  1724  LC--RSTRQR  1731


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 10/23 (43%), Positives = 12/23 (52%), Gaps = 7/23 (30%)
 Frame = -3

Query  3158  HIFL----FSDF*MALDKFDMSI  3102
             HI L    F D   AL+K +M I
Sbjct  318   HISLSKAEFQD---ALEKLNMGI  337


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  136   RDPSDPFSQ  162
             R+PSDP  Q
Sbjct  1255  RNPSDPMPQ  1263


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/9 (55%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = -1

Query  1150  LFNPRIIHL  1124
             LF P ++HL
Sbjct  32    LFSPSVVHL  40


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 19/49 (38%)
 Frame = +2

Query  5093  DRG*MEQAPEDQGPQREPHNEWTLELL--EELKNE---AVR-HFPRIWL  5221
             D G   QA    G QR       LE L  E+L +E    VR  FP  WL
Sbjct  755   DKG---QA----GLQR------ALEILQEEDLIDEDDIPVRSFFPENWL  790


 Score = 18.5 bits (36),  Expect(2) =  2401
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  697   TQDTAI  714
             TQDT I
Sbjct  1309  TQDTVI  1314


 Score = 18.0 bits (35),  Expect(2) =  2401
 Identities = 8/11 (72%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = +1

Query  8704  SLISRTTH-QG  8733
             SL SRTT  QG
Sbjct  127   SL-SRTTNIQG  136


 Score = 18.0 bits (35),  Expect(2) =  2401
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8721  YTPGPGVRY  8747
             Y PG  VRY
Sbjct  157   YNPGQRVRY  165


 Score = 17.6 bits (34),  Expect(2) =  2401
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = +2

Query  626   QGSFR--QD  646
             QG FR  QD
Sbjct  1303  QGGFRSTQD  1311


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +2

Query  5402  SPGSIQEV  5425
             SPGS+ EV
Sbjct  418   SPGSVPEV  425


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 3/10 (30%)
 Frame = -2

Query  2445  EK---YASPT  2425
             EK   YASPT
Sbjct  696   EKLGQYASPT  705


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 12/38 (31%), Positives = 13/38 (34%), Gaps = 25/38 (65%)
 Frame = +1

Query  3592  TICI-RNHSSTTRSK*IRVSQSNNRAVNKKGK-GLSGM  3699
             T+CI RN                       GK GLSGM
Sbjct  1476  TVCIWRN-----------------------GKVGLSGM  1490


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/13 (61%), Positives = 9/13 (69%), Gaps = 1/13 (7%)
 Frame = -1

Query  7489  DAPDCELQQMLLR  7451
             DA  C L+Q LLR
Sbjct  100   DAKSCGLHQ-LLR  111


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  2307  HLVLSFFFMA  2278
             HL  SF+F A
Sbjct  543   HLAPSFYFVA  552


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +3

Query  5799  CGDGGGDGA  5825
             CG GGGD A
Sbjct  642   CGPGGGDSA  650


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -2

Query  4158  ALTV--APVKLL  4129
             ALT   APV LL
Sbjct  1206  ALTLTKAPVDLL  1217


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  5358  RQRRA  5372
             RQRRA
Sbjct  1604  RQRRA  1608


 Score = 18.5 bits (36),  Expect(2) =  6271
 Identities = 7/12 (58%), Positives = 7/12 (58%), Gaps = 3/12 (25%)
 Frame = +1

Query  8977  TRDFPLGTFQGG  9012
             TR    G FQGG
Sbjct  1297  TRQ---GSFQGG  1305


 Score = 15.5 bits (29),  Expect(2) =  6271
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  8860  WMTR  8871
             W+TR
Sbjct  1295  WLTR  1298


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  6716  AFVTI  6730
             AFVTI
Sbjct  1150  AFVTI  1154


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  804   KVVEE  818
             KVVEE
Sbjct  1464  KVVEE  1468


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 3/9 (33%)
 Frame = +3

Query  165  WKISSSGAR  191
            WKIS   AR
Sbjct  220  WKIS---AR  225


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  4107  KQYILT  4124
             K YILT
Sbjct  256   KPYILT  261


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  4171  PPTGGP  4154
             PP GGP
Sbjct  472   PPSGGP  477


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = +2

Query  6560  SLAEEEV  6580
             SLA+E+V
Sbjct  1094  SLAQEQV  1100


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WLTR+
Sbjct  1295  WLTRQ  1299


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WLTR+
Sbjct  1295  WLTRQ  1299


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = -1

Query  8287  SSTSSLYYFYNP  8252
             S T  LY +YNP
Sbjct  1560  SAT--LYDYYNP  1569


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/18 (44%), Positives = 10/18 (55%), Gaps = 0/18 (0%)
 Frame = +2

Query  6989  NTEGSDTITLPCRIKQII  7042
             NT+GS  +  P  I Q I
Sbjct  431   NTDGSGQVSIPIIIPQTI  448


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7712  LQLRSVL  7692
             L+LR VL
Sbjct  856   LELRPVL  862


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  4800  DPNM  4789
             DPNM
Sbjct  972   DPNM  975


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  7293  EKKEQW  7310
             +K EQW
Sbjct  1036  DKTEQW  1041


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 8/15 (53%), Positives = 9/15 (60%), Gaps = 0/15 (0%)
 Frame = +2

Query  1883  DDTVLEEMSLPGRWK  1927
             DD V  + S PG WK
Sbjct  207   DDFVIPDISEPGTWK  221


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/8 (50%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -3

Query  3320  WLANTLST  3297
             WL + L T
Sbjct  805   WLPDSLTT  812


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  8437  APTLSA  8420
             APTL A
Sbjct  1026  APTLAA  1031


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4488  GPFQSGF  4468
             G FQ GF
Sbjct  1300  GSFQGGF  1306


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  5712  TKKNRQVN  5735
             T K R VN
Sbjct  682   TRKKRNVN  689


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 12/24 (50%)
 Frame = +3

Query  2220  KRKGKFQ-----KLGLKIHTILQY  2276
             KR   FQ     KLG       QY
Sbjct  685   KRNVNFQKAINEKLG-------QY  701


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  3471  LIEED  3485
             LI+ED
Sbjct  773   LIDED  777


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  1334  NSLTIW  1317
             +SLT W
Sbjct  808   DSLTTW  813


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2789  YELHP  2803
             YEL P
Sbjct  953   YELNP  957


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  152   GSEGSL  135
             GSEG L
Sbjct  997   GSEGAL  1002


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 4/14 (28%)
 Frame = +3

Query  1266  QEVKNWMTETLLVQ  1307
             QE  NW    LL Q
Sbjct  1108  QETSNW----LLSQ  1117


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  6100  TDYILMHL  6077
             T Y L+HL
Sbjct  1272  TAYALLHL  1279


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/15 (46%), Positives = 7/15 (46%), Gaps = 6/15 (40%)
 Frame = -3

Query  3227  LW-L-----FFALPL  3201
             LW L     FF L L
Sbjct  11    LWGLIWASSFFTLSL  25


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  2813  SIYQD  2799
             SI+QD
Sbjct  203   SIFQD  207


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 3/11 (27%)
 Frame = +2

Query  1889  TV---LEEMSL  1912
             TV   L+EM L
Sbjct  261   TVPGHLDEMQL  271


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/14 (42%), Positives = 8/14 (57%), Gaps = 3/14 (21%)
 Frame = +1

Query  7375  DADGTGQT---IIV  7407
             + DG GQ    II+
Sbjct  431   NTDGSGQVSIPIII  444


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3247  SPYYY  3233
             S YYY
Sbjct  510   SHYYY  514


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  6587  RSVNF  6601
             R VNF
Sbjct  686   RNVNF  690


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  2594  FLSC  2583
             FLSC
Sbjct  739   FLSC  742


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2630  VIYQYMD  2650
             V Y Y+D
Sbjct  861   VLYNYLD  867


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 9/24 (37%), Positives = 9/24 (37%), Gaps = 9/24 (37%)
 Frame = +2

Query  4376  VDIIATDIQTKELQKQITKIQNFR  4447
             VD I         QK    IQ FR
Sbjct  1053  VDLI---------QKGYMRIQQFR  1067


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  8410  LSQQQIG  8430
             L Q+Q+G
Sbjct  1095  LAQEQVG  1101


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 6/14 (42%)
 Frame = +3

Query  8874  REVLEWRFDSRLAF  8915
             RE      DSR AF
Sbjct  1640  RE------DSRAAF  1647


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  3948  QEYG  3959
             QEYG
Sbjct  1742  QEYG  1745


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2363  VQLGIP  2380
             V+LG+P
Sbjct  38    VHLGVP  43


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  2045  NIIGRNLL  2068
             NI G NLL
Sbjct  133   NIQGINLL  140


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -2

Query  7485  PQTVS  7471
             PQT+S
Sbjct  445   PQTIS  449


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/8 (50%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6209  MIMEKGEI  6232
             MI+  G+I
Sbjct  515   MILSRGQI  522


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  2623  WILFSKRL  2600
             W L  KRL
Sbjct  667   WTLSRKRL  674


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/8 (75%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = +3

Query  8436  AASRDLEK  8459
             AASR L+K
Sbjct  1030  AASRYLDK  1037


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  5996  PTDPNPQ  6016
             P DP PQ
Sbjct  1257  PSDPMPQ  1263


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  7179  LEEE  7190
             LEEE
Sbjct  1361  LEEE  1364


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8556  PQVPLRPMT  8582
             P  PL P T
Sbjct  1438  PDAPLQPVT  1446


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  5882  VYYGVP  5899
             V+YG P
Sbjct  1575  VFYGAP  1580


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -3

Query  3326  SRWLANTLS  3300
             S WL + LS
Sbjct  121   SPWLKDSLS  129


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  7004  DTIT  7015
             DTIT
Sbjct  179   DTIT  182


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  3859  QVKIT  3845
             +VKIT
Sbjct  249   EVKIT  253


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 0/12 (0%)
 Frame = -3

Query  3098  LAPASVFLLLSL  3063
             L P   FLL  L
Sbjct  385   LVPGAPFLLQAL  396


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8129  VPEV  8118
             VPEV
Sbjct  422   VPEV  425


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 6/12 (50%), Positives = 6/12 (50%), Gaps = 5/12 (41%)
 Frame = +2

Query  2834  PEKDSWTVNDIQ  2869
             PE     V DIQ
Sbjct  423   PE-----VQDIQ  429


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  4526  IQDNSD  4543
             IQ N D
Sbjct  428   IQQNTD  433


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  734  YSAEHPGAN  760
            Y  +HP AN
Sbjct  555  YHGDHPVAN  563


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  4811  RKRL  4822
             RKRL
Sbjct  671   RKRL  674


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  8667  ILDLW  8681
             IL LW
Sbjct  801   ILTLW  805


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  3998  VAVHV  4012
             V VHV
Sbjct  872   VSVHV  876


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8793  LAQLVL  8776
             LAQ VL
Sbjct  890   LAQQVL  895


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  41    WLTRE  55
             WL R+
Sbjct  1076  WLSRD  1080


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 3/5 (60%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  9126  WLTRE  9140
             WL R+
Sbjct  1076  WLSRD  1080


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -3

Query  5501  AFVMK  5487
             AFV+K
Sbjct  1087  AFVLK  1091


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -1

Query  5191  FILKLL  5174
             F+LK L
Sbjct  1088  FVLKVL  1093


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  4921  LTVFQ  4935
             L VFQ
Sbjct  1160  LAVFQ  1164


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  3821  HSNWRAMA  3844
             H N  AMA
Sbjct  1221  HNNLMAMA  1228


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = -1

Query  7618  ITPTSIPRHSS  7586
             + PT  PR  S
Sbjct  1248  VSPTPAPRNPS  1258


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  8391  RERMRRAEP  8417
             R R RR  P
Sbjct  1455  RNRRRREAP  1463


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  2532  TMCFHRDGK  2558
             T C  R+GK
Sbjct  1476  TVCIWRNGK  1484


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +1

Query  7363  RSLNDADG  7386
             R L D DG
Sbjct  1611  RGLQDEDG  1618


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  3715  FVCWYP  3698
             F C YP
Sbjct  1623  FACYYP  1628


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  4730  MRAFIV  4713
             MR F V
Sbjct  1671  MRNFLV  1676


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/11 (54%), Positives = 7/11 (63%), Gaps = 0/11 (0%)
 Frame = -2

Query  924  LLDVPPLCLAW  892
            LLD P + L W
Sbjct  2    LLDPPAMRLLW  12


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8374  ITLLF  8360
             I LLF
Sbjct  137   INLLF  141


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  8649  SELALPV  8629
             SEL L V
Sbjct  449   SELQLSV  455


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  626   QGSF  637
             QGSF
Sbjct  1299  QGSF  1302


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1952  LQFPL  1938
             LQF L
Sbjct  1365  LQFSL  1369


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  3029  LLESLC  3012
             LL  LC
Sbjct  1585  LLATLC  1590


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  1085  HPSYL  1071
             HP YL
Sbjct  1705  HPQYL  1709


>sp|Q04446.2|GLGB_HUMAN  RecName: Full=1,4-alpha-glucan-branching enzyme; AltName: Full=Glycogen-branching 
enzyme; AltName: Full=Brancher enzyme
Length=702

 GENE ID: 2632 GBE1 | glucan (1,4-alpha-), branching enzyme 1 [Homo sapiens]
(Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  4213  KSRSSRIYE  4239
             K RS RIYE
Sbjct  193   KPRSLRIYE  201


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/6 (100%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -2

Query  1260  LARLLE  1243
             LARLLE
Sbjct  28    LARLLE  33


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 1/8 (12%)
 Frame = -1

Query  7036  LF-YSAWE  7016
             LF YS WE
Sbjct  326   LFAYSSWE  333


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/11 (54%), Positives = 8/11 (72%), Gaps = 0/11 (0%)
 Frame = +2

Query  7502  ARILAVERYLK  7534
             AR L ++ YLK
Sbjct  29    ARLLEIDPYLK  39


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  1339  FKIVLQS  1319
             FKIVL S
Sbjct  646   FKIVLDS  652


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 8/19 (42%), Positives = 10/19 (52%), Gaps = 6/19 (31%)
 Frame = -2

Query  5397  SRIY----W--LHFLLSSV  5359
             SR +    W  L FLLS +
Sbjct  324   SRLFAYSSWEVLRFLLSNI  342


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 7/18 (38%), Positives = 11/18 (61%), Gaps = 6/18 (33%)
 Frame = +3

Query  4875  QVDPE------LADQLIH  4910
             QVD +      LA++L+H
Sbjct  384   QVDEDALTYLMLANHLVH  401


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7015  PPMQNK  7032
             PP QNK
Sbjct  127   PPKQNK  132


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 9/22 (40%)
 Frame = -1

Query  6646  YRCVQL-------YY--YGFSI  6608
             Y C+QL       YY  +G+ I
Sbjct  232   YNCIQLMAIMEHAYYASFGYQI  253


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -3

Query  2417  LLLIFSF  2397
             LL IF F
Sbjct  621   LLFIFNF  627


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/16 (50%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = -1

Query  4984  HLGLTMCPNKAFLIAE  4937
             HL  T+CP+    IAE
Sbjct  398   HLVHTLCPD-SITIAE  412


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  2691  LCCPIS  2674
             LC PIS
Sbjct  420   LCSPIS  425


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 8/21 (38%), Positives = 9/21 (42%), Gaps = 9/21 (42%)
 Frame = -1

Query  4291  KMFSLIS-------YLSYNFL  4250
             KM  LI        YL  NF+
Sbjct  521   KMIRLITHGLGGEGYL--NFM  539


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  6146  RVGLILH  6126
             RV LIL+
Sbjct  690   RVALILQ  696


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/16 (50%), Positives = 9/16 (56%), Gaps = 1/16 (6%)
 Frame = -2

Query  3801  WALSIPSK-NSTFLIP  3757
             W L IP K N   L+P
Sbjct  122   WELYIPPKQNKSVLVP  137


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 2/14 (14%)
 Frame = +2

Query  2429  GD--AYFSVPLDED  2464
             GD   YF    DED
Sbjct  375   GDYSEYFGLQVDED  388


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/12 (50%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +2

Query  5156  WTLELLEELKNE  5191
             W  +LL E K+E
Sbjct  443   W-IQLLKEFKDE  453


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  8673  QGYLVFFGSE  8644
             +GYL F G E
Sbjct  533   EGYLNFMGNE  542


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  199  VPVRAPLLEI  170
            VP  A LLEI
Sbjct  25   VPELARLLEI  34


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -1

Query  862  DNAENMGI  839
            D A  MGI
Sbjct  274  DTAHSMGI  281


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 9/28 (32%), Positives = 9/28 (32%), Gaps = 16/28 (57%)
 Frame = +2

Query  3713  KGIGGNEQVDKLVSAGIRKVLFLDGIDK  3796
             K IG NE                 GIDK
Sbjct  57    KNIGENE----------------GGIDK  68


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  4365  PALYPPI  4345
             PAL  PI
Sbjct  418   PALCSPI  424


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = +1

Query  5725  DRLIDRLIER  5754
             DR  +RL ER
Sbjct  584   DRDMNRLEER  593


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  1296  RFLSSN  1279
             RFL SN
Sbjct  336   RFLLSN  341


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  448  LAHTIC  431
            L HT C
Sbjct  399  LVHTLC  404


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1423  KTLALW  1406
             K LA W
Sbjct  488   KSLAFW  493


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +3

Query  3606  ESFKHN  3623
             E F HN
Sbjct  672   EAFEHN  677


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  6788  YSILLY  6771
             YS L Y
Sbjct  681   YSLLVY  686


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  8678  VDLP  8689
             VDLP
Sbjct  698   VDLP  701


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  7258  STHQGK  7275
             S H+GK
Sbjct  207   SSHEGK  212


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  3310  LASHL  3324
             LA HL
Sbjct  395   LANHL  399


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +1

Query  2068  DSDWLHFKF  2094
             D D L +KF
Sbjct  571   DDDLLRYKF  579


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4267  LSYNFL  4250
             L Y FL
Sbjct  575   LRYKFL  580


>pdb|1YGR|A  Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of 
Rptp Cd45
 pdb|1YGR|B  Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of 
Rptp Cd45
 pdb|1YGU|A  Chain A, Crystal Structure Of The Tandem Phosphatase Domains 
Of Rptp Cd45 With A Ptyr Peptide
 pdb|1YGU|B  Chain B, Crystal Structure Of The Tandem Phosphatase Domains 
Of Rptp Cd45 With A Ptyr Peptide
Length=610


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 7/8 (87%), Positives = 7/8 (87%), Gaps = 0/8 (0%)
 Frame = -2

Query  8937  AALGPRDE  8914
             AA GPRDE
Sbjct  101   AAQGPRDE  108


 Score = 21.4 bits (43),  Expect =  1316
 Identities = 7/12 (58%), Positives = 8/12 (66%), Gaps = 2/12 (16%)
 Frame = +2

Query  3062  KDLIAEIQ--KQ  3091
             K+LI  IQ  KQ
Sbjct  512   KELISXIQVVKQ  523


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  4194  EFPTIPKV  4217
             EF  IP V
Sbjct  33    EFQSIPRV  40


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  5817  LHPHLH  5800
             LHP LH
Sbjct  302   LHPYLH  307


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  936  LKETI  950
            LKETI
Sbjct  416  LKETI  420


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  4755  CVLLNL  4738
             C LLNL
Sbjct  557   CALLNL  562


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  5054  KKDKAT  5071
             KK+KAT
Sbjct  179   KKEKAT  184


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  2434  ITHIQY  2417
             +THIQ+
Sbjct  188   VTHIQF  193


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +3

Query  8514  LEAQEEEEV  8540
             LE  E EEV
Sbjct  563   LESAETEEV  571


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +2

Query  6071  VEQMHEDI  6094
             VE  H DI
Sbjct  7     VEPIHADI  14


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  2150  GHPFLA  2133
             G PFLA
Sbjct  27    GRPFLA  32


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6486  VQMSAQY  6506
             VQ  AQY
Sbjct  273   VQVEAQY  279


 Score = 16.3 bits (31),  Expect(2) = 19613
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +1

Query  2185  NKSISRN  2205
             NKS  RN
Sbjct  345   NKSKNRN  351


 Score = 15.9 bits (30),  Expect(2) = 19613
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2213  EMEKE  2227
             EM KE
Sbjct  369   EMSKE  373


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/31 (35%), Positives = 12/31 (38%), Gaps = 15/31 (48%)
 Frame = -2

Query  4866  ISFSSILWRLPD---PNASLFLLYADPNMLL  4783
             I F S  W  PD   P         DP +LL
Sbjct  191   IQFTS--W--PDHGVPE--------DPHLLL  209


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6094  YILMH  6080
             YIL H
Sbjct  279   YILIH  283


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  2840  KDSWTV  2857
             KDS TV
Sbjct  489   KDSRTV  494


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 8/12 (66%), Positives = 8/12 (66%), Gaps = 1/12 (8%)
 Frame = +3

Query  4941  AIRKALLGHIVS  4976
             A RKA LG  VS
Sbjct  580   ALRKARLG-XVS  590


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  5246  ETYGD  5260
             +TYGD
Sbjct  458   QTYGD  462


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  8711  LAELH  8725
             L ELH
Sbjct  299   LSELH  303


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/4 (75%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +2

Query  2351  DFWE  2362
             DFW+
Sbjct  422   DFWQ  425


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  3291  KHGGQSI  3311
             KHG Q I
Sbjct  442   KHGDQEI  448


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  8171  QYW  8179
             QYW
Sbjct  451   QYW  453


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/11 (45%), Positives = 6/11 (54%), Gaps = 0/11 (0%)
 Frame = +1

Query  6223  RRDKKLLFQYQ  6255
             R D    +QYQ
Sbjct  488   RKDSRTVYQYQ  498


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  2831  LPEKDS  2848
             LP+K+S
Sbjct  525   LPQKNS  530


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +1

Query  5905  EGSNHH  5922
             EG  HH
Sbjct  532   EGNKHH  537


 Score = 15.1 bits (28),  Expect(2) = 47257
 Identities = 3/3 (100%), Positives = 3/3 (100%), Gaps = 0/3 (0%)
 Frame = +2

Query  2636  YQY  2644
             YQY
Sbjct  497   YQY  499


 Score = 15.1 bits (28),  Expect(2) = 47257
 Identities = 5/9 (55%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = +2

Query  2753  KHQKEPPFL  2779
             KH+K  P L
Sbjct  535   KHHKSTPLL  543


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  7874  LSIVN  7888
             L IVN
Sbjct  174   LNIVN  178


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  2047  HNWKK  2061
             HN KK
Sbjct  307   HNXKK  311


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  2519  IRYQYN  2536
             I Y YN
Sbjct  355   IPYDYN  360


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  4562  RKAKII  4579
             RK K+I
Sbjct  430   RKVKVI  435


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6852  KIIVLL  6835
             K+IV L
Sbjct  433   KVIVXL  438


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  3430  CPIYI  3416
             CP YI
Sbjct  166   CPDYI  170


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6603  VKLTDL  6586
             V LT+L
Sbjct  436   VXLTEL  441


>pdb|1TAZ|A  Chain A, Catalytic Domain Of Human Phosphodiesterase 1b
Length=365


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  4613  NHHLPSVF  4590
             NHH  SVF
Sbjct  153   NHHISSVF  160


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6288  MHFFINL  6308
             M  FINL
Sbjct  168   MNIFINL  174


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -1

Query  910  PTVFSMVF  887
            PTVF M F
Sbjct  59   PTVFLMSF  66


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 6/9 (66%), Positives = 7/9 (77%), Gaps = 1/9 (11%)
 Frame = -3

Query  1613  TIFHLVSFL  1587
             T+F L SFL
Sbjct  60    TVF-LMSFL  67


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  5156  WTLELLEE  5179
             WT  L+EE
Sbjct  243   WTKALMEE  250


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +2

Query  8930  RAASGV  8947
             RAASG+
Sbjct  358   RAASGI  363


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3696  HGYQHT  3713
             H Y+HT
Sbjct  122   HDYEHT  127


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +2

Query  2618  NPDIV  2632
             NPD+V
Sbjct  334   NPDVV  338


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/13 (46%), Positives = 6/13 (46%), Gaps = 3/13 (23%)
 Frame = -3

Query  1409  MAGSSYS---LTC  1380
             M G  YS   L C
Sbjct  4     MVGPTYSTAVLNC  16


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 2/10 (20%)
 Frame = -3

Query  2390  LRDVVFLIEL  2361
             LR +VF  EL
Sbjct  39    LRTIVF--EL  46


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 6/10 (60%), Positives = 6/10 (60%), Gaps = 0/10 (0%)
 Frame = -1

Query  7636  NLFQRFITPT  7607
             NL  RF  PT
Sbjct  51    NLISRFKIPT  60


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -1

Query  6238  VFYLSFL  6218
             VF +SFL
Sbjct  61    VFLMSFL  67


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 5/13 (38%)
 Frame = +3

Query  1191  RQGPKE-----PF  1214
             RQG KE     PF
Sbjct  253   RQGDKEAELGLPF  265


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  4134  ISPVLRL  4154
             IS V RL
Sbjct  156   ISSVFRL  162


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  7827  MNNFI  7813
             MN FI
Sbjct  168   MNIFI  172


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  5254  ISFID  5240
             I FID
Sbjct  281   IGFID  285


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = +3

Query  7137  EMVVIATMS  7163
             EMV    MS
Sbjct  188   EMVLATDMS  196


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 7/13 (53%), Positives = 7/13 (53%), Gaps = 4/13 (30%)
 Frame = +3

Query  1419  VLAEAMS----QV  1445
             VLA  MS    QV
Sbjct  190   VLATDMSCHFQQV  202


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +3

Query  6900  IVEGNFS  6920
             IVE  FS
Sbjct  287   IVEPTFS  293


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  1423  KTLALW  1406
             K L LW
Sbjct  18    KNLDLW  23


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  2512  CLIVY  2498
             C IVY
Sbjct  141   CAIVY  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 7/14 (50%), Positives = 7/14 (50%), Gaps = 5/14 (35%)
 Frame = -2

Query  8658  FF--G---SELALP  8632
             FF  G    EL LP
Sbjct  251   FFRQGDKEAELGLP  264


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  7078  PSHQW  7092
             PS QW
Sbjct  317   PSFQW  321


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  4557  QEEKQ  4571
             QE KQ
Sbjct  349   QENKQ  353


>pdb|1IGA|A  Chain A, Model Of Human Iga1 Determined By Solution Scattering 
Curve- Fitting And Homology Modelling
 pdb|1IGA|B  Chain B, Model Of Human Iga1 Determined By Solution Scattering 
Curve- Fitting And Homology Modelling
 pdb|2ESG|A  Chain A, Solution Structure Of The Complex Between Immunoglobulin 
Iga1 And Human Serum Albumin
 9 more sequence titles
 pdb|2ESG|B  Chain B, Solution Structure Of The Complex Between Immunoglobulin 
Iga1 And Human Serum Albumin
 pdb|2QTJ|A  Chain A, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|2QTJ|B  Chain B, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|2QTJ|C  Chain C, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|2QTJ|D  Chain D, Solution Structure Of Human Dimeric Immunoglobulin A
 pdb|3CHN|A  Chain A, Solution Structure Of Human Secretory Iga1
 pdb|3CHN|B  Chain B, Solution Structure Of Human Secretory Iga1
 pdb|3CHN|D  Chain D, Solution Structure Of Human Secretory Iga1
 pdb|3CHN|C  Chain C, Solution Structure Of Human Secretory Iga1
Length=475


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
 Frame = -3

Query  224  PL-VSLSLSGPCSGATARDFP  165
            PL V  S SG   G TAR+FP
Sbjct  158  PLSVTWSESGQ--GVTARNFP  176


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 0/9 (0%)
 Frame = -1

Query  4366  PCTVPPNPP  4340
             PC VP  PP
Sbjct  222   PCPVPSTPP  230


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  7664  PTPSRSC  7644
             PTPS SC
Sbjct  238   PTPSPSC  244


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  6691  DSFSCIV  6671
             D FSC V
Sbjct  431   DTFSCMV  437


 Score = 19.3 bits (38),  Expect =  5722
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  6369  SLHRP  6383
             SLHRP
Sbjct  250   SLHRP  254


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 7/9 (77%), Positives = 7/9 (77%), Gaps = 0/9 (0%)
 Frame = +1

Query  7276  EKSGAERKK  7302
             E SGAE KK
Sbjct  6     EQSGAEVKK  14


 Score = 18.9 bits (37),  Expect =  7678
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -2

Query  6642  DVFSCTIMV  6616
             D FSC  MV
Sbjct  431   DTFSC--MV  437


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9032  PSPAQATPP  9006
             P P   TPP
Sbjct  230   PTPSPSTPP  238


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3843  LVILTC  3860
             LV LTC
Sbjct  367   LVTLTC  372


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  4814  FSCM  4803
             FSCM
Sbjct  433   FSCM  436


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -1

Query  6976  STPSTIKPST  6947
             STP T  PST
Sbjct  227   STPPTPSPST  236


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 6/9 (66%), Positives = 6/9 (66%), Gaps = 2/9 (22%)
 Frame = -1

Query  5821  PSP--PPSP  5801
             PSP  PP P
Sbjct  232   PSPSTPPTP  240


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 8/17 (47%), Positives = 9/17 (52%), Gaps = 7/17 (41%)
 Frame = +3

Query  441  WASRELER------FAV  473
            WASR+ E       FAV
Sbjct  401  WASRQ-EPSQGTTTFAV  416


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 10/20 (50%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
 Frame = -2

Query  3213  CTASVNCFTS--LVW---AP  3169
             C AS   FTS  L W   AP
Sbjct  23    CKASGYSFTSYGLHWVRQAP  42


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +1

Query  8917  ITWPES  8934
             +TW ES
Sbjct  161   VTWSES  166


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -1

Query  5821  PSPPPSP  5801
             PS PP P
Sbjct  226   PSTPPTP  232


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  2091  IFPLAL  2108
             +FPL L
Sbjct  130   VFPLSL  135


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +3

Query  8694  QGYFP  8708
             QG+FP
Sbjct  151   QGFFP  155


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  6144  SGVNFT  6127
             SGV FT
Sbjct  278   SGVTFT  283


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/7 (57%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  8597  YSCLVSH  8577
             +SC+V H
Sbjct  433   FSCMVGH  439


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  1254  EQASQEVK  1277
             EQ   EVK
Sbjct  6     EQSGAEVK  13


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -3

Query  5264  KYPHKF  5247
             KY +KF
Sbjct  60    KYSQKF  65


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -1

Query  2905  NLTC  2894
             NLTC
Sbjct  266   NLTC  269


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  7865  FAVLSIVNRV  7894
             FAV SI  RV
Sbjct  414   FAVTSIL-RV  422


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = +3

Query  6762  VTLVEQNG  6785
             V L EQ G
Sbjct  2     VKLLEQSG  9


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  3075  QKYRSR  3092
             QK+R R
Sbjct  63    QKFRGR  68


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/8 (62%), Positives = 5/8 (62%), Gaps = 0/8 (0%)
 Frame = -2

Query  4137  KLLPLSVC  4114
             K  PLS C
Sbjct  129   KVFPLSLC  136


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -3

Query  9032  PSPAQATPP  9006
             P P   TPP
Sbjct  222   PCPVPSTPP  230


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -2

Query  4065  VSCPV  4051
             V CPV
Sbjct  221   VPCPV  225


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  5570  IKLLYQS  5590
             +KLL QS
Sbjct  2     VKLLEQS  8


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 5/9 (55%), Positives = 5/9 (55%), Gaps = 0/9 (0%)
 Frame = -2

Query  7416  TIPDNNCLA  7390
             T P   CLA
Sbjct  193   TLPATQCLA  201


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  5482  LGNESN  5465
             LG E N
Sbjct  261   LGSEAN  266


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -1

Query  4900  WSASSG  4883
             W  SSG
Sbjct  284   WTPSSG  289


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 6/10 (60%), Positives = 7/10 (70%), Gaps = 1/10 (10%)
 Frame = +2

Query  2024  LVG-PTPVNI  2050
             L G PT VN+
Sbjct  454   LAGKPTHVNV  463


>sp|P60508.1|EFR1_HUMAN  RecName: Full=HERV-FRD_6p24.1 provirus ancestral Env polyprotein; 
AltName: Full=Envelope polyprotein; AltName: Full=HERV-FRD; 
AltName: Full=Syncytin-2; Contains: RecName: Full=Surface 
protein; Short=SU; Contains: RecName: Full=Transmembrane 
protein; Short=TM; Flags: Precursor
Length=538

 GENE ID: 405754 ERVFRDE1 | HERV-FRD provirus ancestral Env polyprotein
[Homo sapiens] (Over 10 PubMed links)


                                                         Sort alignments for this subject sequence by:
                                                           E value  Score  Percent identity
                                                           Query start position  Subject start position
 Score = 22.3 bits (45),  Expect =   731
 Identities = 10/18 (55%), Positives = 11/18 (61%), Gaps = 6/18 (33%)
 Frame = -1

Query  5335  RHP---ILKMDK-QQLLQ  5294
             RHP    L  +K QQLLQ
Sbjct  18    RHPDFPLL--EKAQQLLQ  33


 Score = 21.8 bits (44),  Expect =   981
 Identities = 6/7 (85%), Positives = 7/7 (100%), Gaps = 0/7 (0%)
 Frame = -2

Query  6267  LMLVLIL  6247
             L+LVLIL
Sbjct  4     LLLVLIL  10


 Score = 21.0 bits (42),  Expect =  1765
 Identities = 8/15 (53%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = +3

Query  4722  SPHPRISSEVH-IPL  4763
             SP PR+   +H IPL
Sbjct  343   SPLPRVRRAIHFIPL  357


 Score = 20.6 bits (41),  Expect =  2369
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = -1

Query  1204  FGPCLM  1187
             FGPCL+
Sbjct  499   FGPCLL  504


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 5/6 (83%), Positives = 6/6 (100%), Gaps = 0/6 (0%)
 Frame = +3

Query  1059  TLQEQI  1076
             T+QEQI
Sbjct  401   TMQEQI  406


 Score = 20.2 bits (40),  Expect =  3178
 Identities = 9/14 (64%), Positives = 9/14 (64%), Gaps = 3/14 (21%)
 Frame = -3

Query  224  PLVS---LSLSGPC  192
            PLVS   L L GPC
Sbjct  489  PLVSLLLLLLFGPC  502


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 8/15 (53%), Positives = 8/15 (53%), Gaps = 6/15 (40%)
 Frame = +1

Query  3097  RPMD------ISNLS  3123
             RP D      ISNLS
Sbjct  208   RPADYNQCLQISNLS  222


 Score = 19.7 bits (39),  Expect =  4264
 Identities = 10/21 (47%), Positives = 11/21 (52%), Gaps = 7/21 (33%)
 Frame = -2

Query  2166  HCLTFGPSIPGFNFTGTVSIG  2104
             +CL   PS    N TGT  IG
Sbjct  307   QCL---PS----NWTGTCTIG  320


 Score = 18.5 bits (36),  Expect = 10302
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +1

Query  5461  KCCF  5472
             KCCF
Sbjct  437   KCCF  440


 Score = 18.0 bits (35),  Expect = 13823
 Identities = 7/10 (70%), Positives = 7/10 (70%), Gaps = 0/10 (0%)
 Frame = -2

Query  6840  LLFPNCSLNL  6811
             LLF  C LNL
Sbjct  497   LLFGPCLLNL  506


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +2

Query  7532  KDQQLL  7549
             K QQLL
Sbjct  27    KAQQLL  32


 Score = 17.6 bits (34),  Expect = 18547
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +1

Query  7543  APGDLGL  7563
             APG+L L
Sbjct  329   APGNLSL  335


 Score = 16.8 bits (32),  Expect(2) = 20628
 Identities = 4/6 (66%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8643  LALPVP  8626
             L LP+P
Sbjct  333   LSLPIP  338


 Score = 15.5 bits (29),  Expect(2) = 20628
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  8749  GYLTP  8735
             GY TP
Sbjct  320   GYVTP  324


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 7/17 (41%), Positives = 8/17 (47%), Gaps = 5/17 (29%)
 Frame = -1

Query  4783  ITNLASPSGMCTSELIL  4733
             I NL S     T E +L
Sbjct  218   ISNLSS-----TAEWVL  229


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/5 (100%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = +1

Query  3535  SNLSS  3549
             SNLSS
Sbjct  219   SNLSS  223


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/8 (62%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = +2

Query  6107  DQSLKPCV  6130
             +QS  PCV
Sbjct  247   NQSQTPCV  254


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  9056  HISSC  9070
             HIS C
Sbjct  287   HISTC  291


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 13/39 (33%), Positives = 13/39 (33%), Gaps = 23/39 (58%)
 Frame = -3

Query  7775  NL----PIY----L---------IPIILVHSFLAGFAIL  7710
             NL    PIY    L         IP       LAG  IL
Sbjct  332   NLSLPIPIYGNSPLPRVRRAIHFIPL------LAGLGIL  364


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = -2

Query  8712  NQGSSL  8695
             NQ SSL
Sbjct  457   NQASSL  462


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 11/24 (45%), Positives = 12/24 (50%), Gaps = 7/24 (29%)
 Frame = +2

Query  3311  WQATWIPEWEF--V--NTPPLVKL  3370
             W+ TW   W F  V   T PLV L
Sbjct  473   WEGTW--KW-FSWVLPLTGPLVSL  493


 Score = 17.2 bits (33),  Expect = 24886
 Identities = 6/8 (75%), Positives = 6/8 (75%), Gaps = 0/8 (0%)
 Frame = -3

Query  1766  LLLLRGSC  1743
             LLLL G C
Sbjct  495   LLLLFGPC  502


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = +2

Query  6104  WDQSLK  6121
             WD  LK
Sbjct  78    WDPNLK  83


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -3

Query  8138  TPCV  8127
             TPCV
Sbjct  251   TPCV  254


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/7 (57%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = -2

Query  2421  STVTDFF  2401
             S V +FF
Sbjct  270   SAVSEFF  276


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 5/7 (71%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = -3

Query  4850  FYGDSLT  4830
             F+G SLT
Sbjct  275   FFGTSLT  281


 Score = 16.8 bits (32),  Expect = 33392
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = -2

Query  1587  FHIS  1576
             FHIS
Sbjct  286   FHIS  289


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 5/5 (100%), Gaps = 0/5 (0%)
 Frame = -1

Query  4642  LILIL  4628
             L+LIL
Sbjct  6     LVLIL  10


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  7948  SPRGW  7934
             SPR W
Sbjct  61    SPREW  65


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  1309  FWTNK  1295
             FW NK
Sbjct  238   FWENK  242


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  6667  GSCTI  6653
             G CTI
Sbjct  315   GTCTI  319


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 7/11 (63%), Positives = 8/11 (72%), Gaps = 2/11 (18%)
 Frame = -3

Query  4865  SLFP-PFYGDS  4836
             SL P P YG+S
Sbjct  334   SL-PIPIYGNS  343


 Score = 16.3 bits (31),  Expect = 44805
 Identities = 5/6 (83%), Positives = 5/6 (83%), Gaps = 0/6 (0%)
 Frame = +3

Query  237  AGLGLL  254
            AGLG L
Sbjct  359  AGLGIL  364


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -2

Query  4374  ILSPAL  4357
             IL P L
Sbjct  9     ILTPSL  14


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)
 Frame = +2

Query  2507  ETPGIRY  2527
             ETPG  Y
Sbjct  52    ETPGTAY  58


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -1

Query  259  RFSKP  245
            RF KP
Sbjct  171  RFPKP  175


 Score = 15.9 bits (30),  Expect = 60118
 Identities = 4/6 (66%), Positives = 4/6 (66%), Gaps = 0/6 (0%)
 Frame = -3

Query  8591  CLVSHW  8574
             CL S W
Sbjct  308   CLPSNW  313


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  1402  PAIRQ  1416
             P IRQ
Sbjct  101   PDIRQ  105


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +1

Query  586  PSIVC  600
            PS VC
Sbjct  141  PSTVC  145


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  6669  TTIQE  6683
             TT QE
Sbjct  400   TTMQE  404


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +3

Query  1761  QEPID  1775
             QE ID
Sbjct  403   QEQID  407


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/4 (100%), Positives = 4/4 (100%), Gaps = 0/4 (0%)
 Frame = +3

Query  5853  VVLQ  5864
             VVLQ
Sbjct  412   VVLQ  415


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = -3

Query  2417  LLLIF  2403
             LLL F
Sbjct  495   LLLLF  499


 Score = 15.5 bits (29),  Expect = 80666
 Identities = 4/5 (80%), Positives = 4/5 (80%), Gaps = 0/5 (0%)
 Frame = +2

Query  2060  NLLTQ  2074
             NL TQ
Sbjct  505   NLITQ  509


>pdb|1OQD|K  Chain K, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|L  Chain L, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|M  Chain M, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|N  Chain N, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|O  Chain O, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|P  Chain P, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|Q  Chain Q, Crystal Structure Of Stall-1 And Bcma
 pdb|1OQD|R  Chain R, Crystal Structure Of Stall-1 And Bcma
Length=39

 Score = 22.3 bits (45),  Expect =   731
 Identities = 6/7 (85%), Positives = 6/7 (85%), Gaps = 0/7 (0%)
 Frame = +2

Query  7094  QIRCSSN  7114
             Q RCSSN
Sbjct  18    QLRCSSN  24
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NC_001802:Human immunodeficiency virus 1,...

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Distribution of 5521 Blast Hits on the Query Sequence [?]

Descriptions

Alignments
